Guide to the Human Genome
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Name: KIAA0746 Sequence: fasta or formatted (1132aa) NCBI GI: 154689719
Description:

hypothetical protein LOC23231

Referenced in:

Fibronectin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         88           3
 C cysteine            1.6         18           2
 D aspartate           4.0         45           2
 E glutamate           6.1         69           2
 F phenylalanine       4.0         45           2
 G glycine             6.9         78           2
 H histidine           3.4         38           2
 I isoleucine          4.9         56           2
 K lysine              4.9         56           2
 L leucine            10.7        121           4
 M methionine          1.6         18           1
 N asparagine          4.2         48           2
 P proline             4.8         54           3
 Q glutamine           5.2         59           5
 R arginine            4.8         54           2
 S serine              6.9         78           2
 T threonine           4.0         45           2
 V valine              6.3         71           2
 W tryptophan          2.1         24           1
 Y tyrosine            5.9         67           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23231 
SEL1L2                0.056   sel-1 suppressor of lin-12-like 2 
SEL1L                 0.043   sel-1 suppressor of lin-12-like 
LRP2BP                0.007   LRP2 binding protein 
KIAA0141              0.005   hypothetical protein LOC9812 
KIAA0141              0.005   hypothetical protein LOC9812 
MUC2                  0.004   mucin 2 precursor 
OTOG                  0.003   PREDICTED: otogelin isoform 1 
OTOG                  0.003   PREDICTED: otogelin isoform 2 
OTOG                  0.003   PREDICTED: otogelin isoform 2 
OTOG                  0.003   PREDICTED: otogelin isoform 1 
OTOG                  0.003   PREDICTED: otogelin isoform 2 
OTOG                  0.003   PREDICTED: otogelin isoform 1 
GUCY1A2               0.003   guanylate cyclase 1, soluble, alpha 2 
FLJ37078              0.003   hypothetical protein LOC222183 
ADAM29                0.003   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.003   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.003   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.003   ADAM metallopeptidase domain 29 preproprotein 
GATM                  0.003   L-arginine:glycine amidinotransferase precursor [Homo...
GPATCH8               0.003   G patch domain containing 8 
CNTNAP1               0.003   contactin associated protein 1 precursor 
MAP3K7IP1             0.003   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.003   mitogen-activated protein kinase kinase kinase 7 int...
SFPQ                  0.003   splicing factor proline/glutamine rich (polypyrimidin...
CLDN14                0.002   claudin 14 
CLDN14                0.002   claudin 14 
PGR                   0.002   progesterone receptor 
MUC7                  0.002   mucin 7, secreted precursor 
MUC7                  0.002   mucin 7, secreted precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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