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Search of human proteins with 217330656
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217330656 hypothetical protein LOC9812 [Homo sapiens]
(515 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217330658 hypothetical protein LOC9812 [Homo sapiens] 1052 0.0
gi|217330656 hypothetical protein LOC9812 [Homo sapiens] 1052 0.0
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens] 64 4e-10
gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens] 58 2e-08
gi|33620759 LRP2 binding protein [Homo sapiens] 54 3e-07
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 42 0.001
gi|199562283 retrotransposon-like 1 [Homo sapiens] 39 0.015
gi|29570782 additional sex combs like 1 [Homo sapiens] 37 0.043
gi|154689719 hypothetical protein LOC23231 [Homo sapiens] 37 0.043
gi|169166055 PREDICTED: hypothetical protein [Homo sapiens] 37 0.056
gi|239742084 PREDICTED: hypothetical protein XP_002342433 [Homo ... 37 0.056
gi|14150078 hypothetical protein LOC84273 [Homo sapiens] 36 0.096
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 35 0.13
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 35 0.13
gi|57232759 intestine-specific homeobox [Homo sapiens] 34 0.37
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 33 0.62
gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo ... 33 0.81
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo... 33 0.81
gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo... 33 0.81
gi|150170670 piccolo isoform 2 [Homo sapiens] 32 1.4
gi|150378539 piccolo isoform 1 [Homo sapiens] 32 1.4
gi|38348206 Ras and Rab interactor-like [Homo sapiens] 32 1.4
gi|208431781 cyclic nucleotide gated channel beta 1 isoform b [H... 32 1.8
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 32 1.8
gi|71274152 hypothetical protein LOC388939 [Homo sapiens] 32 1.8
gi|71274109 nuclear factor of kappa light polypeptide gene enhan... 31 2.4
gi|14790128 caspase 9 isoform beta preproprotein [Homo sapiens] 31 2.4
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 31 2.4
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 31 2.4
gi|21071016 epidermal growth factor receptor pathway substrate 8... 31 2.4
>gi|217330658 hypothetical protein LOC9812 [Homo sapiens]
Length = 515
Score = 1052 bits (2720), Expect = 0.0
Identities = 515/515 (100%), Positives = 515/515 (100%)
Query: 1 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60
MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
Sbjct: 1 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60
Query: 61 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120
PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
Sbjct: 61 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120
Query: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180
HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
Sbjct: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180
Query: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240
GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
Sbjct: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240
Query: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300
QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
Sbjct: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300
Query: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
Sbjct: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
Query: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420
FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
Sbjct: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420
Query: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480
EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
Sbjct: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480
Query: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515
LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
Sbjct: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515
>gi|217330656 hypothetical protein LOC9812 [Homo sapiens]
Length = 515
Score = 1052 bits (2720), Expect = 0.0
Identities = 515/515 (100%), Positives = 515/515 (100%)
Query: 1 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60
MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
Sbjct: 1 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60
Query: 61 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120
PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
Sbjct: 61 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120
Query: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180
HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
Sbjct: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180
Query: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240
GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
Sbjct: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240
Query: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300
QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
Sbjct: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300
Query: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
Sbjct: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
Query: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420
FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
Sbjct: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420
Query: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480
EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
Sbjct: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480
Query: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515
LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
Sbjct: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515
>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
Length = 794
Score = 63.5 bits (153), Expect = 4e-10
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 267 YFQKAAARGYSKAQYNAGLCHEHG-RGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLR 325
Y+Q A +G +AQ G H HG RG ++ +A Y+ LAA+ G+S A + +
Sbjct: 363 YYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGK--MY 420
Query: 326 DPASSWNPE-RQRAVSLLKQAADSGLREAQAFLGV--LFTKEPYLDEQRAVKYLWLAANN 382
S P+ + A+ K+AAD G Q+ LG+ L+ + ++ A+KY AA
Sbjct: 421 SEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQ 480
Query: 383 GDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMG 434
G + LG Y G+GV+R+ +AL+ + ++ G+ A L + + G
Sbjct: 481 GWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASG 532
Score = 53.9 bits (128), Expect = 3e-07
Identities = 59/229 (25%), Positives = 89/229 (38%), Gaps = 45/229 (19%)
Query: 245 SIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPR--------- 295
S+ +N +G + D+ A YF A+ G+ A YN H G G R
Sbjct: 491 SMYYNGIGVKR----DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELF 546
Query: 296 -----------------------DISKAVLYYQLAASQGHSLAQYRYARCLLRDPAS--S 330
D + AV+ Y L A QG+ +AQ A L + AS
Sbjct: 547 KNVCERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVG 606
Query: 331 WNPERQRAVSLLKQAADSGLREAQAFLGVLF-----TKEPYLDEQRAVKYLWLAANNGDS 385
N RA+ +AA G A+ LG T Y E + Y + +
Sbjct: 607 ENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDY--ETAFIHYRLASEQQHSA 664
Query: 386 QSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMG 434
Q+ ++LG +EKGLG+++++ A R Y +A +A AL +G
Sbjct: 665 QAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLG 713
Score = 51.2 bits (121), Expect = 2e-06
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
+ YYQ A +G AQ + L QRA AA++G A AFLG +
Sbjct: 361 IQYYQFLAEKGDVQAQVGLGQLHLHG-GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKM 419
Query: 361 FTKEPYL---DEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAA 417
+++ + + A+ Y AA+ G+ + LG+ Y G GVQ N AL+ +Q++A
Sbjct: 420 YSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAE 479
Query: 418 LGNEAAQERLRALFSMG 434
G Q +L +++ G
Sbjct: 480 QGWVDGQLQLGSMYYNG 496
Score = 51.2 bits (121), Expect = 2e-06
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRG-TPRDISKAVLYYQLAASQGHSLAQYR 318
+H AF YF AA G S A G + G P+ A+ Y++ AA G+ + Q
Sbjct: 393 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 452
Query: 319 YARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL--DEQRAVKYL 376
L N + A+ ++AA+ G + Q LG ++ + D ++A+KY
Sbjct: 453 LGMAYLYGRGVQVNYD--LALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYF 510
Query: 377 WLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFS 432
LA+ G + Y+L + G GV R+ A+ ++ G + ERL ++
Sbjct: 511 NLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWS--ERLMTAYN 564
Score = 45.4 bits (106), Expect = 1e-04
Identities = 64/280 (22%), Positives = 104/280 (37%), Gaps = 55/280 (19%)
Query: 216 TGEKEQDKSKTLSLEEAVTS--IQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAA 273
+ +K Q + L++A + + L ++S ++ F +N++ AA F+K
Sbjct: 197 SNKKSQKREAYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQ-----AAREMFEKLTE 251
Query: 274 RGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQG----HSLAQYRYARCL------ 323
G K Q G + G G +KA++YY A G H + YRY +
Sbjct: 252 EGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSC 311
Query: 324 ----------------------------LRDPASSWNPE------RQRAVSLLKQAADSG 349
+R P NP + + + A+ G
Sbjct: 312 ESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKG 371
Query: 350 LREAQAFLGVLFT---KEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLG 406
+AQ LG L + + QRA Y LAAN G+S + LG Y +G +
Sbjct: 372 DVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSN 431
Query: 407 E-ALRCYQQSAALGNEAAQERLRALFSMGAAAPGPSDLTV 445
E AL ++++A +GN Q L + G DL +
Sbjct: 432 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLAL 471
Score = 37.7 bits (86), Expect = 0.025
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 277 SKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPER- 335
++ Y G+ +G +A Y Q AAS H+ A R + LL + P+
Sbjct: 183 AEMMYQTGMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALL---FGDYLPQNI 239
Query: 336 QRAVSLLKQAADSGLREAQAFLGVLFTKEPYLD--EQRAVKYLWLAANNGDSQSRYHLGI 393
Q A + ++ + G + Q LG L+ ++ + +A+ Y A G+ + LG
Sbjct: 240 QAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGY 299
Query: 394 CYEKGLGVQRNLGEALRCYQ 413
Y G+GV ++ AL Y+
Sbjct: 300 RYWAGIGVLQSCESALTHYR 319
>gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]
Length = 688
Score = 58.2 bits (139), Expect = 2e-08
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 37/173 (21%)
Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
++ AF YF AA++G + + GL + HG+G P + ++A+ Y+Q AA +G AQ++
Sbjct: 354 NNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQL 413
Query: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
+ SG+ + D + A KY +LA
Sbjct: 414 G---------------------FMYYSGSGI---------------WKDYKLAFKYFYLA 437
Query: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFS 432
+ +G + Y+L Y G GV R+ A+ Y+ LG+ A++ L A F+
Sbjct: 438 SQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH-WAEKFLTAYFA 489
Score = 50.1 bits (118), Expect = 5e-06
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 264 AFSYFQKAAARGYSKAQYNAGLCHEHGRGT--PRDISK--------AVLYYQLAASQGHS 313
A SY++K A + + G+ E R T P ++S YY+ A +G
Sbjct: 238 ALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDV 297
Query: 314 LAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQR-- 371
Q + L + + +A+ +AA +G A AF+G ++ + Q
Sbjct: 298 QIQVSLGQLHLIG-RKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNA 356
Query: 372 -AVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRAL 430
A KY +AA+ G++ + LG+ Y G GV N EAL+ +Q++A G AQ +L +
Sbjct: 357 TAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFM 416
Query: 431 FSMGA 435
+ G+
Sbjct: 417 YYSGS 421
Score = 48.5 bits (114), Expect = 1e-05
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
++ A YFQKAA +G+ AQ+ G + G G +D A Y+ LA+ G LA Y
Sbjct: 390 NYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYL 449
Query: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
A+ + + + AV L K + G A+ FL F + + V+Y LA
Sbjct: 450 AK--MYATGTGVVRSCRTAVELYKGVCELG-HWAEKFLTAYFAYKDGDIDSSLVQYALLA 506
Query: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAA 423
+ I K + N+ E + Y + L N AA
Sbjct: 507 EMGYEVAQSNSAFILESK----KANILEKEKMYPMALLLWNRAA 546
Score = 46.2 bits (108), Expect = 7e-05
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 214 QPTGEKEQDKSKTLSLEEA-VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAA 272
Q +K+++++ L + A + +++ + +++ ++ F G +N+ TAA ++ A
Sbjct: 120 QSKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNI-----TAAIQLYESLA 174
Query: 273 ARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQ----YRYARCLLRDPA 328
G KAQ G +G G D +KA++YY ++ G+ ++Q YRY +
Sbjct: 175 KEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGI----- 229
Query: 329 SSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAV------------KYL 376
+ + A+S K+ AD + GV K + + +Y
Sbjct: 230 -NVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYY 288
Query: 377 WLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGA 435
A GD Q + LG + G G+ ++ +AL + ++A G+ A + ++ G
Sbjct: 289 KFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGN 348
Query: 436 AAPGPSDLTVTGLKSFS 452
AA ++ T K FS
Sbjct: 349 AAVPQNN--ATAFKYFS 363
Score = 45.8 bits (107), Expect = 9e-05
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 43/203 (21%)
Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPR------------------------ 295
D+ AF YF A+ G A Y + G G R
Sbjct: 426 DYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAEKFLT 485
Query: 296 --------DISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLL--KQA 345
DI +++ Y L A G+ +AQ A L A+ E+ ++LL +A
Sbjct: 486 AYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRA 545
Query: 346 ADSGLREAQAFLGVLF-----TKEPYLDEQRAVKYLWLAANN-GDSQSRYHLGICYEKGL 399
A G A+ +G TK+ Y Q A + +AAN ++Q+ ++L YE GL
Sbjct: 546 AIQGNAFARVKIGDYHYYGYGTKKDY---QTAATHYSIAANKYHNAQAMFNLAYMYEHGL 602
Query: 400 GVQRNLGEALRCYQQSAALGNEA 422
G+ +++ A R Y +A +A
Sbjct: 603 GITKDIHLARRLYDMAAQTSPDA 625
>gi|33620759 LRP2 binding protein [Homo sapiens]
Length = 347
Score = 53.9 bits (128), Expect = 3e-07
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 218 EKEQDKSKTLSLEEAVTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYS 277
+++ D + +++A+ +++ ++A+ G + G + A F++ + +
Sbjct: 32 KEKTDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDH- 90
Query: 278 KAQYNAGLCHEHGRGTPRDISKAVLYYQLA-------ASQGHSLAQYRYARCLLRDPASS 330
+A Y G+ + G GT D K V Y + A A Y R
Sbjct: 91 QATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVK 150
Query: 331 WNPERQRAVSLLKQAADSGLREA----QAFLGVLF-TKEPYLDEQRAVKYLWLAANNGDS 385
+ E + L+ AAD+G +A Q+ LG+ + TKEP + ++A + A NG+
Sbjct: 151 RSNEEAERLWLI--AADNGNPKASVKAQSMLGLYYSTKEPK-ELEKAFYWHSEACGNGNL 207
Query: 386 QSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
+S+ LG+ Y G G++++ AL+C +++A GN AQ L
Sbjct: 208 ESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNL 249
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 367 LDEQRAVKYLWLAANNGDSQSR-------YHLGICYEKGLGVQRNLGEALRCYQQSAALG 419
LD ++ V Y+ ++ ++R Y+LG Y +G GV+R+ EA R + +A G
Sbjct: 108 LDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNG 167
Query: 420 NEAAQERLRALFSMGAAAPGPSDL 443
N A + +++ + + P +L
Sbjct: 168 NPKASVKAQSMLGLYYSTKEPKEL 191
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 42.0 bits (97), Expect = 0.001
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 10/118 (8%)
Query: 112 PQRVEHCS-----WHSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEE 166
P R H S W SP R SP C SL + L SP + R R E
Sbjct: 1593 PSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSER 1652
Query: 167 ASAQPRNFSHNSLRGARPQDPSE---EGPGDFGFLHASSSIESEAKPAQPQPTGEKEQ 221
+ P SH S R + PS+ GP + H S S P+Q G E+
Sbjct: 1653 SHRSPSERSHRSSSERRHRSPSQRSHRGPSERS--HCSPSERRHRSPSQRSHRGPSER 1708
Score = 33.5 bits (75), Expect = 0.48
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 111 GPQRVEHCSWHSPLDRFFSSPLW--HPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEAS 168
GP HCS P +R SP H S R+H SP + R R R E +
Sbjct: 1680 GPSERSHCS---PSERRHRSPSQRSHRGPSERRH--HSPSKRSHRSPARRSHRSPSERSH 1734
Query: 169 AQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQ 221
P SH+S R PSE H S S S P++ + E+
Sbjct: 1735 HSPSERSHHSPSERRHHSPSERS-------HCSPSERSHCSPSERRHRSPSER 1780
>gi|199562283 retrotransposon-like 1 [Homo sapiens]
Length = 1358
Score = 38.5 bits (88), Expect = 0.015
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Query: 118 CSWHSP--LDRFFSSPLWHPCSSLRQH---ILPSPDGPAPRHTGLREPRLGQEEASAQPR 172
C++HSP L F P PC +L +H +LP P + P+ +E S QP
Sbjct: 523 CTFHSPYCLKNCFRPP--PPCIALERHGMSLLPGLPHPYSDLADVFNPKEADDETSDQPS 580
Query: 173 NFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKT----LS 228
+ + L + P + + G D H+ + E + A +P G + Q++++
Sbjct: 581 SDGSDDLSESEPSELQQAGDSD----HSETFYECPS-TAPWEPVGARMQERARLQEEYWD 635
Query: 229 LEEAVTSIQQLFQLSVSIAFNFLGTE 254
L++ +T+ Q Q+ + G E
Sbjct: 636 LQDMLTNRQDYIQMIPELFDQLHGAE 661
>gi|29570782 additional sex combs like 1 [Homo sapiens]
Length = 1541
Score = 37.0 bits (84), Expect = 0.043
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 424 QERLRALF--SMGAAAPG--PSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLG 479
Q+ +RA+ S AAPG P DLT + FSSP++ S G + ++ TG
Sbjct: 1243 QKEVRAMSQDSNSNAAPGKSPGDLTTSRTPRFSSPNVISFGPEQTGRALGDQSNVTGQGK 1302
Query: 480 LLCRSGHLGASLEASSRAIPPHPYPLE 506
L SG++ A+L+ R P P P E
Sbjct: 1303 KLFGSGNVAATLQ-RPRPADPMPLPAE 1328
>gi|154689719 hypothetical protein LOC23231 [Homo sapiens]
Length = 1132
Score = 37.0 bits (84), Expect = 0.043
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHG--RGTP-RDISKAVLYYQLAASQGHSLAQ 316
++ A Y+ KA G A YN G+ H G G P R+ + A Y+ AA GH
Sbjct: 779 NYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGT 838
Query: 317 YRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTK--EPYLDE--QRA 372
+ + ++ + ++AV K A E +LG + K YL+ A
Sbjct: 839 LWCSLYYITGNLETFPRDPEKAVVWAKHVA-----EKNGYLGHVIRKGLNAYLEGSWHEA 893
Query: 373 VKYLWLAANNGDSQSRYHLG-ICYEKGLGVQRNLG 406
+ Y LAA G S+ +L IC E+ +R LG
Sbjct: 894 LLYYVLAAETGIEVSQTNLAHICEERPDLARRYLG 928
>gi|169166055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 36.6 bits (83), Expect = 0.056
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 2 WRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGP-HGP-GTSG 59
WR+P R LP T P LWR T S P T + P P RS P HGP G S
Sbjct: 58 WRVPTQGQRLLPDTPSPGLWRCTFGSL----PHATFHHAMPPTPPPSRSTPAHGPFGCSS 113
Query: 60 G 60
G
Sbjct: 114 G 114
>gi|239742084 PREDICTED: hypothetical protein XP_002342433 [Homo
sapiens]
Length = 124
Score = 36.6 bits (83), Expect = 0.056
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 2 WRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGP-HGP-GTSG 59
WR+P R LP T P LWR T S P T + P P RS P HGP G S
Sbjct: 58 WRVPTQGQRLLPDTPSPGLWRCTFGSL----PHATFHHAMPPTPPPSRSTPAHGPFGCSS 113
Query: 60 G 60
G
Sbjct: 114 G 114
>gi|14150078 hypothetical protein LOC84273 [Homo sapiens]
Length = 698
Score = 35.8 bits (81), Expect = 0.096
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 151 APRHTGLREPRLGQEEASAQPRNFSHNSLRGAR-PQDPSE-EGPGDFGFLHASSSIESEA 208
A RH GLREP L + A+A +F H+S G P DP + EG G+ G +
Sbjct: 22 AARH-GLREPLLERRCAAAS--SFQHSSSLGRELPYDPVDTEGFGEGGDMQERFLFPEYI 78
Query: 209 KPAQPQPTGEKEQDKSKTLSLEE 231
+PQPT EK+ + + EE
Sbjct: 79 LDPEPQPTREKQLQELQQQQEEE 101
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 35.4 bits (80), Expect = 0.13
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 145 PSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPS-----EEGPGDFGFLH 199
P P GP P TGL EP G E + L +P + EEGP G H
Sbjct: 197 PVPPGPTPVPTGLLEPEPGGSE--------DCDVLEATQPLEQGFLQQLEEGPSSSG-QH 247
Query: 200 ASSSIESEAKPAQPQPTG------EKEQDKSKTLSLEEAVTS 235
E E+KP +P+ +G EK + K L ++AV S
Sbjct: 248 QPQQEEEESKP-EPERSGLSWSNREKAKQAFKELLRDKAVPS 288
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 35.4 bits (80), Expect = 0.13
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 145 PSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPS-----EEGPGDFGFLH 199
P P GP P TGL EP G E + L +P + EEGP G H
Sbjct: 203 PVPPGPTPVPTGLLEPEPGGSE--------DCDVLEATQPLEQGFLQQLEEGPSSSG-QH 253
Query: 200 ASSSIESEAKPAQPQPTG------EKEQDKSKTLSLEEAVTS 235
E E+KP +P+ +G EK + K L ++AV S
Sbjct: 254 QPQQEEEESKP-EPERSGLSWSNREKAKQAFKELLRDKAVPS 294
>gi|57232759 intestine-specific homeobox [Homo sapiens]
Length = 245
Score = 33.9 bits (76), Expect = 0.37
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 183 RPQDPSEEGPGDFGFLHASSSIESEAKPAQPQP-TGEKEQDKSKTLSLEEAVTSIQQLFQ 241
RP+ P EEGPG+ A++S KP + QP G K + + +T E + ++++F
Sbjct: 48 RPEGPGEEGPGE-----AAASGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFH 102
Query: 242 LS 243
+
Sbjct: 103 FT 104
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 33.1 bits (74), Expect = 0.62
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 18 PSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGGPRSH 64
P +W + +TSPDG S P P G HGP ++G P H
Sbjct: 314 PKIWSLAETATSPDGAPKAS-----PPPPAGHPGAHGP-SAGAPLQH 354
>gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo
sapiens]
Length = 1376
Score = 32.7 bits (73), Expect = 0.81
Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 23/182 (12%)
Query: 126 RFFSSPLWHPC--SSLRQHILPS----PDGPAPRHTGLREPRLGQEEASAQ-PRNFSHNS 178
RF SPL+ C + + LP P PA +H+ LG + +S P+ S S
Sbjct: 821 RFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS------LGSDHSSVSTPKKLSGKS 874
Query: 179 LRGAR------PQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
G +D ++ G F + S K + + + L E+
Sbjct: 875 KSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES 934
Query: 233 VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAF----SYFQKAAARGYSKAQYNAGLCHE 288
S+ L +S A L E K+ H + A G+S +GLC
Sbjct: 935 QGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCER 994
Query: 289 HG 290
HG
Sbjct: 995 HG 996
>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
sapiens]
Length = 1447
Score = 32.7 bits (73), Expect = 0.81
Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 23/182 (12%)
Query: 126 RFFSSPLWHPC--SSLRQHILPS----PDGPAPRHTGLREPRLGQEEASAQ-PRNFSHNS 178
RF SPL+ C + + LP P PA +H+ LG + +S P+ S S
Sbjct: 821 RFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS------LGSDHSSVSTPKKLSGKS 874
Query: 179 LRGAR------PQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
G +D ++ G F + S K + + + L E+
Sbjct: 875 KSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES 934
Query: 233 VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAF----SYFQKAAARGYSKAQYNAGLCHE 288
S+ L +S A L E K+ H + A G+S +GLC
Sbjct: 935 QGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCER 994
Query: 289 HG 290
HG
Sbjct: 995 HG 996
>gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo
sapiens]
Length = 799
Score = 32.7 bits (73), Expect = 0.81
Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 23/182 (12%)
Query: 126 RFFSSPLWHPC--SSLRQHILPS----PDGPAPRHTGLREPRLGQEEASAQ-PRNFSHNS 178
RF SPL+ C + + LP P PA +H+ LG + +S P+ S S
Sbjct: 173 RFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS------LGSDHSSVSTPKKLSGKS 226
Query: 179 LRGAR------PQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
G +D ++ G F + S K + + + L E+
Sbjct: 227 KSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES 286
Query: 233 VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAF----SYFQKAAARGYSKAQYNAGLCHE 288
S+ L +S A L E K+ H + A G+S +GLC
Sbjct: 287 QGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCER 346
Query: 289 HG 290
HG
Sbjct: 347 HG 348
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 144 LPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQ-DPSEEGPGDFGFLHASS 202
LP P P P+ G +P Q+ SA+P + S + Q P++ P G S
Sbjct: 473 LPGPAKPPPQQPGPAKPP-PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 203 SIESEAKPA--QPQPTGEKEQDKSKTLS 228
AKP+ QP P Q +K +S
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQSTKPVS 559
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 144 LPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQ-DPSEEGPGDFGFLHASS 202
LP P P P+ G +P Q+ SA+P + S + Q P++ P G S
Sbjct: 473 LPGPAKPPPQQPGPAKPP-PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531
Query: 203 SIESEAKPA--QPQPTGEKEQDKSKTLS 228
AKP+ QP P Q +K +S
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQSTKPVS 559
>gi|38348206 Ras and Rab interactor-like [Homo sapiens]
Length = 452
Score = 32.0 bits (71), Expect = 1.4
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 33/170 (19%)
Query: 39 TLLVPVPNLDRSGPHGPGTSGGPRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQL 98
TLL+P P L GP T +D + S V+ L WG
Sbjct: 21 TLLLPPPTL---GPRDEHTDPVQIGRVQQDTPGKVLSIVNQLYLETHRGWG--------- 68
Query: 99 ARQIHFQASLPAGPQRVEHCSWHSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLR 158
R+ Q + P QR H P R +P H S ++ + P D P P L
Sbjct: 69 -REQTPQETEPEAAQR------HDPAPR---NPAPHGVSWVKGPLSPEVDHPGPALASLL 118
Query: 159 EPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEA 208
E +EE + + R DP EEGP D +H S + + +
Sbjct: 119 E----EEEEDLEGKE-------EGREDDPEEEGPEDVLTIHVQSLVRARS 157
>gi|208431781 cyclic nucleotide gated channel beta 1 isoform b [Homo
sapiens]
Length = 299
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Query: 141 QHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHA 200
Q +LP P G PR T ++E +EE +P + P+ EE + +
Sbjct: 6 QRVLPQPPG-TPRKTKMQE----EEEVEPEPEMEAE-----VEPEPNPEEAETESESMPP 55
Query: 201 SSSI-ESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQL 239
S E E A P P KE + T+SL I ++
Sbjct: 56 EESFKEEEVAVADPSPQETKEAALTSTISLRAQGAEISEM 95
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Query: 141 QHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHA 200
Q +LP P G PR T ++E +EE +P + P+ EE + +
Sbjct: 6 QRVLPQPPG-TPRKTKMQE----EEEVEPEPEMEAE-----VEPEPNPEEAETESESMPP 55
Query: 201 SSSI-ESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQL 239
S E E A P P KE + T+SL I ++
Sbjct: 56 EESFKEEEVAVADPSPQETKEAALTSTISLRAQGAEISEM 95
>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
Length = 1288
Score = 31.6 bits (70), Expect = 1.8
Identities = 40/150 (26%), Positives = 49/150 (32%), Gaps = 23/150 (15%)
Query: 2 WRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGGP 61
W P L P L PS + GP + S+ P LD S P P TS P
Sbjct: 877 WASPKLRASVSPLDLLPSKSTASLTKPHSTGPGSGRSSCQPRKPALDLSSP--PATSQSP 934
Query: 62 RSHG--WKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCS 119
G W A + S P AI+W + P+G R S
Sbjct: 935 EVKGGTWSQAEKATSLYRQPR---KAIAW---------------HHSGPPSGQNRTSESS 976
Query: 120 WHSP-LDRFFSSPLWHPCSSLRQHILPSPD 148
P R S P+ S R H +P D
Sbjct: 977 LARPRQSRERSPPVGRKASPTRTHWVPQAD 1006
>gi|71274109 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, epsilon [Homo sapiens]
Length = 500
Score = 31.2 bits (69), Expect = 2.4
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 10/101 (9%)
Query: 135 PCSSLRQHILPSP--DGPAP-RHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEG 191
P + R+ + P P GP P R G+ E R G +EA + SLR R S
Sbjct: 115 PGKAARRSLEPDPAQTGPRPARAAGMSEARKGPDEAEESQYDSGIESLRSLRSLPESTSA 174
Query: 192 PGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
P AS + +P P KE + + E A
Sbjct: 175 P-------ASGPSDGSPQPCTHPPGPVKEPQEKEDADGERA 208
>gi|14790128 caspase 9 isoform beta preproprotein [Homo sapiens]
Length = 266
Score = 31.2 bits (69), Expect = 2.4
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 183 RPQDPSEEGPGDF-----GFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQ 237
RP D G GD GF AS+S E E+ + P+P Q+ +T +A++S+
Sbjct: 127 RPVDIGSGGFGDVEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLP 186
Query: 238 QLFQLSVSIAF--NFLGTENMKSG 259
+ VS + F+ + KSG
Sbjct: 187 TPSDIFVSYSTFPGFVSWRDPKSG 210
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 31.2 bits (69), Expect = 2.4
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 108 LPAGPQRVEHCSWHSPLD--RFFSSPLWHPCSSLRQHILPSPDGP-APRHTGLREPRLGQ 164
LPA P + + P D + +PL P H P+ +GP G R P G+
Sbjct: 118 LPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGR 177
Query: 165 EEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQ 214
+ + PR S A P S GP G S +E + +PQ
Sbjct: 178 TQGQSGPRESPRASPGSAAPAMASVRGPARDGATR-SEPHATEIRTLEPQ 226
>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
Length = 1445
Score = 31.2 bits (69), Expect = 2.4
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 146 SPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIE 205
SP P + P+ Q+ + +H R Q +GP +S
Sbjct: 1177 SPGQQEPGSPKAKAPQKSQKTLGCADKGEAHRRPRTGE-QGHRSKGP-------RTSEAS 1228
Query: 206 SEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLFQLSVS 245
+ PAQ + G+K++ K L LE+ T + FQ +S
Sbjct: 1229 GRSHPAQAREIGDKQERKYNQLQLEKGQTPPESHFQRKIS 1268
>gi|21071016 epidermal growth factor receptor pathway substrate
8-like protein 3 isoform b [Homo sapiens]
Length = 593
Score = 31.2 bits (69), Expect = 2.4
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 131 PLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEE 190
P P +H LP P PRHT REP PR R + P+DP +
Sbjct: 189 PPEQPHQRTLEHSLPPSPRPLPRHTSAREP---SAFTLPPPR-------RSSSPEDPERD 238
Query: 191 GPGDFGFLHASSSIE--------SEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQL--F 240
+ H IE ++AK ++ + G+K +D+ +T Q + F
Sbjct: 239 ---EEVLNHVLRDIELFMGKLEKAQAKTSRKKKFGKKNKDQG-------GLTQAQYIDCF 288
Query: 241 QLSVSIAFNFLG 252
Q + +FN LG
Sbjct: 289 Q-KIKHSFNLLG 299
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,171,105
Number of Sequences: 37866
Number of extensions: 1228355
Number of successful extensions: 4632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 4529
Number of HSP's gapped (non-prelim): 180
length of query: 515
length of database: 18,247,518
effective HSP length: 107
effective length of query: 408
effective length of database: 14,195,856
effective search space: 5791909248
effective search space used: 5791909248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.