Search of human proteins with 217330596

Search of human proteins with 217330596

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]
         (474 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]                    954   0.0  
gi|14210490 LGP1 homolog isoform 1 [Homo sapiens]                     857   0.0  
gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]                    764   0.0  
gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1 [...    36   0.067
gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3 [...    36   0.067
gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2 [...    36   0.067
gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo ...    35   0.11 
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform...    33   0.43 
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ...    33   0.43 
gi|239757149 PREDICTED: hypothetical protein [Homo sapiens]            32   0.96 
gi|239751657 PREDICTED: hypothetical protein XP_002347944 [Homo ...    32   0.96 
gi|239746163 PREDICTED: hypothetical protein XP_002343666 [Homo ...    32   0.96 
gi|13376844 ring finger protein 39 isoform 1 [Homo sapiens]            32   1.6  
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       32   1.6  
gi|52353306 leucine rich repeat containing 55 [Homo sapiens]           32   1.6  
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]           31   2.1  
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]           31   2.1  
gi|45827771 autoantigen RCD8 [Homo sapiens]                            31   2.8  
gi|25952118 calcium/calmodulin-dependent protein kinase II alpha...    30   3.7  
gi|25952114 calcium/calmodulin-dependent protein kinase II alpha...    30   3.7  
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ...    30   4.8  
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              30   4.8  
gi|167736355 mucin 4 isoform a [Homo sapiens]                          30   6.2  
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]    30   6.2  
gi|11545912 nucleotide-binding oligomerization domain containing...    29   8.1  
gi|23397642 GREB1 protein isoform a [Homo sapiens]                     29   8.1  

>gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]
          Length = 474

 Score =  954 bits (2466), Expect = 0.0
 Identities = 474/474 (100%), Positives = 474/474 (100%)

Query: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60
           MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL
Sbjct: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60

Query: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120
           HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN
Sbjct: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120

Query: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180
           QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK
Sbjct: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180

Query: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240
           DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL
Sbjct: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240

Query: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300
           REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG
Sbjct: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300

Query: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360
           LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT
Sbjct: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360

Query: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420
           RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD
Sbjct: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420

Query: 421 HGCVESSILEWGRTDRAEDTRLGSCPFTGSMCAHGVYSQIPLRALLPTTRCLWR 474
           HGCVESSILEWGRTDRAEDTRLGSCPFTGSMCAHGVYSQIPLRALLPTTRCLWR
Sbjct: 421 HGCVESSILEWGRTDRAEDTRLGSCPFTGSMCAHGVYSQIPLRALLPTTRCLWR 474


>gi|14210490 LGP1 homolog isoform 1 [Homo sapiens]
          Length = 530

 Score =  857 bits (2214), Expect = 0.0
 Identities = 429/430 (99%), Positives = 430/430 (100%)

Query: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60
           MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL
Sbjct: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60

Query: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120
           HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN
Sbjct: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120

Query: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180
           QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK
Sbjct: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180

Query: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240
           DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL
Sbjct: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240

Query: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300
           REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG
Sbjct: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300

Query: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360
           LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT
Sbjct: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360

Query: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420
           RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD
Sbjct: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420

Query: 421 HGCVESSILE 430
           HGCVESSIL+
Sbjct: 421 HGCVESSILD 430


>gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]
          Length = 491

 Score =  764 bits (1972), Expect = 0.0
 Identities = 390/430 (90%), Positives = 391/430 (90%), Gaps = 39/430 (9%)

Query: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60
           MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL
Sbjct: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60

Query: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120
           HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKA                  
Sbjct: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKA------------------ 102

Query: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180
                                YPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK
Sbjct: 103 ---------------------YPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 141

Query: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240
           DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL
Sbjct: 142 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 201

Query: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300
           REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG
Sbjct: 202 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 261

Query: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360
           LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT
Sbjct: 262 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 321

Query: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420
           RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD
Sbjct: 322 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 381

Query: 421 HGCVESSILE 430
           HGCVESSIL+
Sbjct: 382 HGCVESSILD 391


>gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1
           [Homo sapiens]
          Length = 927

 Score = 36.2 bits (82), Expect = 0.067
 Identities = 72/309 (23%), Positives = 116/309 (37%), Gaps = 40/309 (12%)

Query: 175 GTPGTKDPRALLLDA-LRSPGLRALEAGTAVELLDVFLGL---ETDGEELAGAIAAGNPG 230
           G P   D R L  +     PG    + G  +   D  +G    +T G  L          
Sbjct: 292 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDR 351

Query: 231 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 290
            P  +   EL ++  QGP  L     P+     + D G + E+                P
Sbjct: 352 EPGADAPLELGDSSPQGPMSLESLAPPE-----STDEGAETESP--------------EP 392

Query: 291 AYAASGGVLGLNLQPEQPHG-LYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKE- 348
                 G  GL L+PE+P G   L+PP    +  LP  +  ++E  S LL+ EA   +  
Sbjct: 393 GDEGEPGRSGLELEPEEPPGWRELVPPDT--LHSLPKSQVKRQEVISELLVTEAAHVRML 450

Query: 349 ---YELVLTDRASLTRCRLGDVVRVVGAYNQCPVVR--FICRLDQTLSVRG---EDIGED 400
              ++L     A      L ++  +  + ++   V   F+ RL +     G   E+IG+ 
Sbjct: 451 RVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEEIGDV 510

Query: 401 LFSEALGRAVGQWAGAKLLDHGCVESSI-LEWGRTDRAEDTRLGSCPFTGSMCAHGVYSQ 459
           L +   G A G W   K+    C   S  LE  +  + +D R   C F     +     +
Sbjct: 511 LLARFDG-AEGSWF-QKISSRFCSRQSFALEQLKAKQRKDPRF--CAFVQEAESRPRCRR 566

Query: 460 IPLRALLPT 468
           + L+ ++PT
Sbjct: 567 LQLKDMIPT 575


>gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3
           [Homo sapiens]
          Length = 879

 Score = 36.2 bits (82), Expect = 0.067
 Identities = 72/309 (23%), Positives = 116/309 (37%), Gaps = 40/309 (12%)

Query: 175 GTPGTKDPRALLLDA-LRSPGLRALEAGTAVELLDVFLGL---ETDGEELAGAIAAGNPG 230
           G P   D R L  +     PG    + G  +   D  +G    +T G  L          
Sbjct: 244 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDR 303

Query: 231 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 290
            P  +   EL ++  QGP  L     P+     + D G + E+                P
Sbjct: 304 EPGADAPLELGDSSPQGPMSLESLAPPE-----STDEGAETESP--------------EP 344

Query: 291 AYAASGGVLGLNLQPEQPHG-LYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKE- 348
                 G  GL L+PE+P G   L+PP    +  LP  +  ++E  S LL+ EA   +  
Sbjct: 345 GDEGEPGRSGLELEPEEPPGWRELVPPDT--LHSLPKSQVKRQEVISELLVTEAAHVRML 402

Query: 349 ---YELVLTDRASLTRCRLGDVVRVVGAYNQCPVVR--FICRLDQTLSVRG---EDIGED 400
              ++L     A      L ++  +  + ++   V   F+ RL +     G   E+IG+ 
Sbjct: 403 RVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEEIGDV 462

Query: 401 LFSEALGRAVGQWAGAKLLDHGCVESSI-LEWGRTDRAEDTRLGSCPFTGSMCAHGVYSQ 459
           L +   G A G W   K+    C   S  LE  +  + +D R   C F     +     +
Sbjct: 463 LLARFDG-AEGSWF-QKISSRFCSRQSFALEQLKAKQRKDPRF--CAFVQEAESRPRCRR 518

Query: 460 IPLRALLPT 468
           + L+ ++PT
Sbjct: 519 LQLKDMIPT 527


>gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2
           [Homo sapiens]
          Length = 912

 Score = 36.2 bits (82), Expect = 0.067
 Identities = 72/309 (23%), Positives = 116/309 (37%), Gaps = 40/309 (12%)

Query: 175 GTPGTKDPRALLLDA-LRSPGLRALEAGTAVELLDVFLGL---ETDGEELAGAIAAGNPG 230
           G P   D R L  +     PG    + G  +   D  +G    +T G  L          
Sbjct: 277 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDR 336

Query: 231 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 290
            P  +   EL ++  QGP  L     P+     + D G + E+                P
Sbjct: 337 EPGADAPLELGDSSPQGPMSLESLAPPE-----STDEGAETESP--------------EP 377

Query: 291 AYAASGGVLGLNLQPEQPHG-LYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKE- 348
                 G  GL L+PE+P G   L+PP    +  LP  +  ++E  S LL+ EA   +  
Sbjct: 378 GDEGEPGRSGLELEPEEPPGWRELVPPDT--LHSLPKSQVKRQEVISELLVTEAAHVRML 435

Query: 349 ---YELVLTDRASLTRCRLGDVVRVVGAYNQCPVVR--FICRLDQTLSVRG---EDIGED 400
              ++L     A      L ++  +  + ++   V   F+ RL +     G   E+IG+ 
Sbjct: 436 RVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEEIGDV 495

Query: 401 LFSEALGRAVGQWAGAKLLDHGCVESSI-LEWGRTDRAEDTRLGSCPFTGSMCAHGVYSQ 459
           L +   G A G W   K+    C   S  LE  +  + +D R   C F     +     +
Sbjct: 496 LLARFDG-AEGSWF-QKISSRFCSRQSFALEQLKAKQRKDPRF--CAFVQEAESRPRCRR 551

Query: 460 IPLRALLPT 468
           + L+ ++PT
Sbjct: 552 LQLKDMIPT 560


>gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo
           sapiens]
          Length = 490

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 45/164 (27%), Positives = 64/164 (39%), Gaps = 9/164 (5%)

Query: 116 PPTSNQDLGEASL---QATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLG 172
           PPTS   LG  S        L L    +  P  L     A   L S   +P P  G  + 
Sbjct: 54  PPTSLCSLGSLSQFGKPGAQLQLRPRPRGPPRFLTWVHVALNLLPSNQYQPRP--GLPVQ 111

Query: 173 QVGTPGTKDPRALLLDALRSPGLRALEAGTAVEL-LDVFLGLET-DGEELAGAIAAGNPG 230
             G  G + P+  L    + PG     AG    L +DV L ++  D +++   + A  PG
Sbjct: 112 AAGCAGARCPQGWLKSG-KGPGPPEARAGIRPRLTVDVGLLVDLRDAQQIRTLLLAAGPG 170

Query: 231 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAV 274
            P R+R  E++      P        P     +TLD G +A A+
Sbjct: 171 LPPRQRGLEVKLVAAHQPPSRNTAPAPTAPTALTLD-GAEAPAL 213


>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform 2
           [Homo sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 101 KASQTQQEDSGEQPLPPTSNQDL-----GEASLQATLLG-LAALNKAYPEVLAQGRTARV 154
           +A+   + D    P+PPT  + L     G   L   LLG + AL ++  EV A+ ++   
Sbjct: 197 RAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQESMQEVQARVQSLES 256

Query: 155 TLTSPWPRPLPWPGNTLGQVGTPG 178
               P  RP P P      +G PG
Sbjct: 257 MPRPPEQRPQPRPSARPWPLGLPG 280


>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
           [Homo sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 101 KASQTQQEDSGEQPLPPTSNQDL-----GEASLQATLLG-LAALNKAYPEVLAQGRTARV 154
           +A+   + D    P+PPT  + L     G   L   LLG + AL ++  EV A+ ++   
Sbjct: 197 RAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQESMQEVQARVQSLES 256

Query: 155 TLTSPWPRPLPWPGNTLGQVGTPG 178
               P  RP P P      +G PG
Sbjct: 257 MPRPPEQRPQPRPSARPWPLGLPG 280


>gi|239757149 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 72

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 164 LPWPGNTLGQVGTPGTKDPRALLLDA-------LRSPGLRA 197
           LPWP + LG+ G  GT  PR L  +A       LR PG+ A
Sbjct: 3   LPWPPHNLGRRGAAGTALPRGLRTEAAVAAQGRLRMPGVPA 43


>gi|239751657 PREDICTED: hypothetical protein XP_002347944 [Homo
           sapiens]
          Length = 72

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 164 LPWPGNTLGQVGTPGTKDPRALLLDA-------LRSPGLRA 197
           LPWP + LG+ G  GT  PR L  +A       LR PG+ A
Sbjct: 3   LPWPPHNLGRRGAAGTALPRGLRTEAAVAAQGRLRMPGVPA 43


>gi|239746163 PREDICTED: hypothetical protein XP_002343666 [Homo
           sapiens]
          Length = 72

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 164 LPWPGNTLGQVGTPGTKDPRALLLDA-------LRSPGLRA 197
           LPWP + LG+ G  GT  PR L  +A       LR PG+ A
Sbjct: 3   LPWPPHNLGRRGAAGTALPRGLRTEAAVAAQGRLRMPGVPA 43


>gi|13376844 ring finger protein 39 isoform 1 [Homo sapiens]
          Length = 420

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 38/134 (28%), Positives = 52/134 (38%), Gaps = 12/134 (8%)

Query: 107 QEDSGEQPLPPTSNQDLGEASLQATLLGLAALNKAYPEVLAQGRTARV-TLTSPWPRPLP 165
           ++ SGE      S+  +G A       G   L  A      +GR  R+  LT+P P    
Sbjct: 297 RDSSGEDADDEESHYAVGAAGESVQRKGCVRLCPAGAVWAVEGRGGRLWALTAPEP---- 352

Query: 166 WPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIA 225
                LG V  P    PR + +D     G  A   G +++LL  F      GE +     
Sbjct: 353 ---TLLGGVEPP----PRRIRVDLDWERGRVAFYDGRSLDLLYAFQAPGPLGERIFPLFC 405

Query: 226 AGNPGAPLRERAAE 239
             +P APLR   AE
Sbjct: 406 TCDPRAPLRIVPAE 419


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 46/141 (32%), Positives = 53/141 (37%), Gaps = 9/141 (6%)

Query: 102  ASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGL--AALNKAYPEVLAQGRTARVTLTSP 159
            A    Q  S EQP    S Q L +A   +   G   A L  + P V A  +      TS 
Sbjct: 1347 APYKDQLSSKEQPSFLASQQLLSQAG-PSNPPGAPPAPLAPSSPPVTALPQDGAAPATST 1405

Query: 160  WPRPLPWPGNTLGQVGTPGTKDPRALLLDALRS-PGLRALEAGTAVELLDVFLGLETDGE 218
             P P      T  Q G PGT  P+ L  +   S P     EA  AV+ L V L   T   
Sbjct: 1406 MPEP---ASGTASQAGGPGT--PQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAP 1460

Query: 219  ELAGAIAAGNPGAPLRERAAE 239
            E A    A  P  PL   A E
Sbjct: 1461 EAASTRDASAPREPLPPPAPE 1481


>gi|52353306 leucine rich repeat containing 55 [Homo sapiens]
          Length = 341

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 164 LPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELL 207
           LP  G+T  Q+  PG   P  LL+  L + GL   +AGT+  +L
Sbjct: 41  LPKMGDTWAQLPWPGPPHPAMLLISLLLAAGLMHSDAGTSCPVL 84


>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
          Length = 2426

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 100  TKASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSP 159
            T+   +  E+S  QP PP S  ++ E S   T   ++A +   P VL     A VT+  P
Sbjct: 1197 TEVPSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASD---PSVLVS--EAAVTVPEP 1251

Query: 160  WPRP 163
             P P
Sbjct: 1252 PPEP 1255


>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
          Length = 2303

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 100  TKASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSP 159
            T+   +  E+S  QP PP S  ++ E S   T   ++A +   P VL     A VT+  P
Sbjct: 1197 TEVPSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASD---PSVLVS--EAAVTVPEP 1251

Query: 160  WPRP 163
             P P
Sbjct: 1252 PPEP 1255


>gi|45827771 autoantigen RCD8 [Homo sapiens]
          Length = 1401

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 97  LPLTKASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGL--AALNKAYPEVLAQGRTARV 154
           LP    S+T+  D         S QD+ E + +A   G   +A     P+ +A   +A +
Sbjct: 719 LPQASPSRTRSPDVISSASTALS-QDIPEIASEALSRGFGSSAPEGLEPDSMASAASA-L 776

Query: 155 TLTSPWPRPLPWPGNTLGQVGTPGTKD 181
            L SP PRP P  G  LG  G PG  D
Sbjct: 777 HLLSPRPRPGPELGPQLGLDGGPGDGD 803


>gi|25952118 calcium/calmodulin-dependent protein kinase II alpha
           isoform 2 [Homo sapiens]
          Length = 478

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 11/58 (18%)

Query: 201 GTAVELLDVFLGLETDGEELAGAIAAGNPG--APLRERAAELREALEQGPRGLALRLW 256
           G AV+L D  L +E +GE+ A    AG PG  +P         E L + P G  + LW
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP---------EVLRKDPYGKPVDLW 197


>gi|25952114 calcium/calmodulin-dependent protein kinase II alpha
           isoform 1 [Homo sapiens]
          Length = 489

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 11/58 (18%)

Query: 201 GTAVELLDVFLGLETDGEELAGAIAAGNPG--APLRERAAELREALEQGPRGLALRLW 256
           G AV+L D  L +E +GE+ A    AG PG  +P         E L + P G  + LW
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP---------EVLRKDPYGKPVDLW 197


>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
           sapiens]
          Length = 262

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 163 PLPWP-GNTLGQVGTPGTKDPRALLLDALRSPGLRALE 199
           P+P P G+ L ++G P  + P    +   RSP LR+LE
Sbjct: 164 PVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRSLE 201


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 142 YPEVLAQGRT-ARVTLTSPWPRPLPWP--GNTLGQVGTPGTK 180
           +PE  A G   +R  L  P PRPLPWP   + + ++ TP  K
Sbjct: 841 FPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPK 882


>gi|167736355 mucin 4 isoform a [Homo sapiens]
          Length = 5284

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 3/113 (2%)

Query: 97   LPLTKASQTQQEDSGEQPLPPTSNQDLGEAS-LQATLLGLAALNKAYPEVLAQGRTARVT 155
            LP+T AS     D+   P+  TS+   G+A+ L  T L   +     P  +    +A   
Sbjct: 3649 LPVTDASSASTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDASSASTG 3708

Query: 156  LTSPWPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSP--GLRALEAGTAVEL 206
              +P P  +P   +T   +  P T    A    A   P  GL +   G    L
Sbjct: 3709 HATPLPVTIPSSVSTGDTMPLPVTSPSSASTGHATPLPVTGLSSASTGDTTPL 3761


>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
          Length = 4861

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 232 PLRERAAELREALEQGP-RGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 290
           PLRER   L   L QGP R  +L    ++Q+ + L +      VA+L       L + SP
Sbjct: 856 PLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASL-------LGYSSP 908

Query: 291 AYAA--SGGVLGLNLQPEQPHGLYLLPPGAPFIELL 324
           + AA  S    G     +QP+G     P     E+L
Sbjct: 909 SDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEIL 944


>gi|11545912 nucleotide-binding oligomerization domain containing 2
           [Homo sapiens]
          Length = 1040

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 11/67 (16%)

Query: 17  ALLRQQRSQDARLS--WLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALRWCL 74
           ALL++    + +++  +LAGL  R  WG L    T ++  L          +Q   RWCL
Sbjct: 661 ALLQKAEPHNLQITAAFLAGLLSREHWGLLAECQTSEKALLR---------RQACARWCL 711

Query: 75  QGAQRPH 81
             + R H
Sbjct: 712 ARSLRKH 718


>gi|23397642 GREB1 protein isoform a [Homo sapiens]
          Length = 1949

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 58/259 (22%), Positives = 92/259 (35%), Gaps = 56/259 (21%)

Query: 64   QSQQQALRWCLQGAQRPHCSLRRSTDIST------FRNHLPLTKASQTQQEDSGEQPLPP 117
            +S  ++LR+C        C +R + +           N +PL K ++ +  +S  + L  
Sbjct: 1037 ESLPRSLRYCDLRLINSSCLVRTALEQELGLAAYFVSNEVPLEKGARNEALESDAEKLSS 1096

Query: 118  TSNQD--LG-------------------------EASLQATLLGLAALNKAYPEVLAQGR 150
            T N+D  LG                           S +A+   L   + A P  L QG 
Sbjct: 1097 TDNEDEELGTEGSTSEKRSPMKRERSRSHDSASSSLSSKASGSALGGESSAQPTALPQGE 1156

Query: 151  TARVTLTSPWPRPLPWPGNTLGQVGTPGTKD--PRALLLDALRSPG--------LRALEA 200
             AR    SP PR     G   G+   P      P A+   +  SPG        LR  + 
Sbjct: 1157 HAR----SPQPRGPAEEGRAPGEKQRPRASQGPPSAI---SRHSPGPTPQPDCSLRTGQR 1209

Query: 201  GTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKL- 259
               V +      L +     + ++A       L+     L +A  Q P    +   PKL 
Sbjct: 1210 SVQVSVTSSCSQLSSSSGSSSSSVAPAAGTWVLQASQCSLTKACRQPP----IVFLPKLV 1265

Query: 260  -QVVVTLDAGGQAEAVAAL 277
              +VV+ D+ G  +A + L
Sbjct: 1266 YDMVVSTDSSGLPKAASLL 1284


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,999,261
Number of Sequences: 37866
Number of extensions: 906840
Number of successful extensions: 3176
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3152
Number of HSP's gapped (non-prelim): 43
length of query: 474
length of database: 18,247,518
effective HSP length: 106
effective length of query: 368
effective length of database: 14,233,722
effective search space: 5238009696
effective search space used: 5238009696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.