RNF39 3241

Name: RNF39	Sequence: fasta or formatted (420aa)		NCBI GI: 13376844
Description: ring finger protein 39 isoform 1		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [354aa] ring finger protein 39 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 47 2 C cysteine 3.8 16 2 D aspartate 5.2 22 2 E glutamate 7.1 30 2 F phenylalanine 2.1 9 1 G glycine 10.0 42 2 H histidine 1.2 5 1 I isoleucine 1.9 8 1 K lysine 2.9 12 2 L leucine 10.0 42 2 M methionine 1.2 5 1 N asparagine 1.0 4 1 P proline 9.3 39 3 Q glutamine 1.4 6 1 R arginine 11.4 48 3 S serine 6.2 26 2 T threonine 4.5 19 1 V valine 6.0 25 2 W tryptophan 2.4 10 2 Y tyrosine 1.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ring finger protein 39 isoform 1 RNF39 0.765 ring finger protein 39 isoform 2 TRIM39 0.106 tripartite motif-containing 39 isoform 2 TRIM39 0.106 tripartite motif-containing 39 isoform 1 TRIM7 0.103 tripartite motif-containing 7 isoform 2 TRIM7 0.103 tripartite motif-containing 7 isoform 3 TRIM7 0.103 tripartite motif-containing 7 isoform 3 TRIM7 0.103 tripartite motif-containing 7 isoform 1 TRIM7 0.103 tripartite motif-containing 7 isoform 3 BTN1A1 0.097 butyrophilin, subfamily 1, member A1 TRIM41 0.094 tripartite motif-containing 41 isoform 1 TRIM15 0.092 tripartite motif protein 15 BTN2A2 0.088 butyrophilin, subfamily 2, member A2 isoform b [Homo... BTN2A2 0.088 butyrophilin, subfamily 2, member A2 isoform a BTN3A1 0.085 butyrophilin, subfamily 3, member A1 isoform c [Hom... BTN3A1 0.085 butyrophilin, subfamily 3, member A1 isoform a [Homo... BTN2A1 0.085 butyrophilin, subfamily 2, member A1 isoform 1 precur... TRIM58 0.084 tripartite motif-containing 58 TRIM11 0.083 tripartite motif-containing 11 TRIML1 0.083 tripartite motif family-like 1 BTN3A3 0.083 butyrophilin, subfamily 3, member A3 isoform a BTN3A3 0.083 butyrophilin, subfamily 3, member A3 isoform b [Homo... ERMAP 0.081 erythroblast membrane-associated protein precursor [... ERMAP 0.081 erythroblast membrane-associated protein precursor [... TRIM27 0.079 ret finger protein TRIM62 0.075 tripartite motif-containing 62 TRIM68 0.075 ring finger protein 137 TRIM10 0.073 tripartite motif-containing 10 isoform 1 TRIM69 0.072 tripartite motif-containing 69 isoform b TRIM69 0.072 tripartite motif-containing 69 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.