Guide to the Human Genome
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Name: CAMK2A Sequence: fasta or formatted (489aa) NCBI GI: 25952114
Description:

calcium/calmodulin-dependent protein kinase II alpha isoform 1

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [478aa] calcium/calmodulin-dependent protein kinase II alpha isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         37           2
 C cysteine            2.0         10           1
 D aspartate           4.9         24           1
 E glutamate           8.0         39           2
 F phenylalanine       3.7         18           1
 G glycine             6.5         32           2
 H histidine           4.3         21           2
 I isoleucine          6.3         31           2
 K lysine              7.0         34           2
 L leucine             9.0         44           3
 M methionine          1.8          9           1
 N asparagine          2.9         14           1
 P proline             4.1         20           2
 Q glutamine           3.7         18           2
 R arginine            5.7         28           2
 S serine              6.3         31           4
 T threonine           5.7         28           2
 V valine              5.7         28           2
 W tryptophan          1.6          8           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase II alpha... 
CAMK2A                0.972   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2D                0.882   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.854   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.854   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.854   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.854   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.854   calcium/calmodulin-dependent protein kinase II delta...
CAMK2B                0.847   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.847   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.842   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.837   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.834   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.831   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.829   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.828   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.823   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.803   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.794   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.769   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.597   calcium/calmodulin-dependent protein kinase II beta ...
CASK                  0.259   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.259   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.259   calcium/calmodulin-dependent serine protein kinase ...
CAMK1D                0.224   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.224   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK4                 0.223   calcium/calmodulin-dependent protein kinase IV 
CAMK1                 0.213   calcium/calmodulin-dependent protein kinase I 
CAMK1G                0.211   calcium/calmodulin-dependent protein kinase IG [Homo...
PNCK                  0.210   pregnancy upregulated non-ubiquitously expressed Ca...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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