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Search of human proteins with 217272894
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217272894 elongation factor Tu GTP binding domain containing
2 isoform b [Homo sapiens]
(937 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217272894 elongation factor Tu GTP binding domain containing ... 1899 0.0
gi|217272892 elongation factor Tu GTP binding domain containing ... 1899 0.0
gi|4503483 eukaryotic translation elongation factor 2 [Homo sapi... 632 0.0
gi|94966754 elongation factor Tu GTP binding domain containing 1... 173 6e-43
gi|94966752 elongation factor Tu GTP binding domain containing 1... 166 7e-41
gi|157426893 GUF1 GTPase homolog [Homo sapiens] 88 3e-17
gi|239756373 PREDICTED: similar to elongation factor Tu GTP bind... 84 5e-16
gi|239750897 PREDICTED: similar to elongation factor Tu GTP bind... 84 5e-16
gi|239745282 PREDICTED: similar to elongation factor Tu GTP bind... 84 5e-16
gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo s... 70 7e-12
gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo s... 70 7e-12
gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo s... 70 7e-12
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 68 5e-11
gi|53729339 mitochondrial translational initiation factor 2 prec... 55 3e-07
gi|53729337 mitochondrial translational initiation factor 2 prec... 55 3e-07
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 47 1e-04
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 40 0.010
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 40 0.010
gi|34147630 Tu translation elongation factor, mitochondrial prec... 40 0.013
gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 35 0.43
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 35 0.43
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 35 0.43
gi|46094014 peptide chain release factor 3 [Homo sapiens] 34 0.73
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 34 0.73
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 34 0.73
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 34 0.73
gi|6912246 CD3E antigen, epsilon polypeptide associated protein ... 33 1.2
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 33 1.6
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 33 1.6
gi|4885351 glutamic pyruvate transaminase [Homo sapiens] 32 2.1
>gi|217272894 elongation factor Tu GTP binding domain containing 2
isoform b [Homo sapiens]
Length = 937
Score = 1899 bits (4920), Expect = 0.0
Identities = 937/937 (100%), Positives = 937/937 (100%)
Query: 1 MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIK 60
MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIK
Sbjct: 1 MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIK 60
Query: 61 PVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHP 120
PVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHP
Sbjct: 61 PVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHP 120
Query: 121 EIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV 180
EIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV
Sbjct: 121 EIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV 180
Query: 181 TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAY 240
TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAY
Sbjct: 181 TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAY 240
Query: 241 YKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDIN 300
YKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDIN
Sbjct: 241 YKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDIN 300
Query: 301 YQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT 360
YQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT
Sbjct: 301 YQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT 360
Query: 361 LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTG 420
LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTG
Sbjct: 361 LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTG 420
Query: 421 GVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYT 480
GVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYT
Sbjct: 421 GVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYT 480
Query: 481 LEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ 540
LEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ
Sbjct: 481 LEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ 540
Query: 541 IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGEL 600
IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGEL
Sbjct: 541 IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGEL 600
Query: 601 YLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKG 660
YLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKG
Sbjct: 601 YLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKG 660
Query: 661 LAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD 720
LAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD
Sbjct: 661 LAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD 720
Query: 721 KALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRV 780
KALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRV
Sbjct: 721 KALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRV 780
Query: 781 VYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFI 840
VYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFI
Sbjct: 781 VYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFI 840
Query: 841 PAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMI 900
PAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMI
Sbjct: 841 PAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMI 900
Query: 901 KTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM 937
KTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
Sbjct: 901 KTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM 937
>gi|217272892 elongation factor Tu GTP binding domain containing 2
isoform a [Homo sapiens]
Length = 972
Score = 1899 bits (4920), Expect = 0.0
Identities = 937/937 (100%), Positives = 937/937 (100%)
Query: 1 MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIK 60
MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIK
Sbjct: 36 MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIK 95
Query: 61 PVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHP 120
PVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHP
Sbjct: 96 PVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHP 155
Query: 121 EIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV 180
EIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV
Sbjct: 156 EIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV 215
Query: 181 TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAY 240
TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAY
Sbjct: 216 TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAY 275
Query: 241 YKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDIN 300
YKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDIN
Sbjct: 276 YKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDIN 335
Query: 301 YQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT 360
YQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT
Sbjct: 336 YQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT 395
Query: 361 LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTG 420
LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTG
Sbjct: 396 LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTG 455
Query: 421 GVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYT 480
GVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYT
Sbjct: 456 GVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYT 515
Query: 481 LEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ 540
LEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ
Sbjct: 516 LEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ 575
Query: 541 IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGEL 600
IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGEL
Sbjct: 576 IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGEL 635
Query: 601 YLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKG 660
YLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKG
Sbjct: 636 YLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKG 695
Query: 661 LAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD 720
LAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD
Sbjct: 696 LAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD 755
Query: 721 KALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRV 780
KALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRV
Sbjct: 756 KALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRV 815
Query: 781 VYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFI 840
VYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFI
Sbjct: 816 VYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFI 875
Query: 841 PAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMI 900
PAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMI
Sbjct: 876 PAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMI 935
Query: 901 KTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM 937
KTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
Sbjct: 936 KTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM 972
>gi|4503483 eukaryotic translation elongation factor 2 [Homo
sapiens]
Length = 858
Score = 632 bits (1629), Expect = 0.0
Identities = 341/873 (39%), Positives = 512/873 (58%), Gaps = 52/873 (5%)
Query: 79 YEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFT 138
+ +D + +MD IRN+++ H+ HGK+ D L+ + R + +TD
Sbjct: 4 FTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETR-FTDTRKD 62
Query: 139 EQERGVGIKSTPVTV-----------VLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRIS 187
EQER + IKST +++ + G +L N++D+PGHV+FS EVTA LR++
Sbjct: 63 EQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVT 122
Query: 188 DGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIV 247
DG ++ +D GV + TE +++ A+ ER+ + +NK+DR +LEL+L P + Y + IV
Sbjct: 123 DGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIV 182
Query: 248 DEVNGLISMYSTDE-----NLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTF-----G 297
+ VN +IS Y E N+++ P+LG V F S + FTL FA++Y F G
Sbjct: 183 ENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEG 242
Query: 298 DINYQEFAKR-------LWGDIYFNPKTRKFTKKAPTSSSQ---RSFVEFILEPLYKILA 347
+ E AK+ LWGD YF+P KF+K A + + R+F + IL+P++K+
Sbjct: 243 QLGPAERAKKVEDMMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFD 302
Query: 348 QVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPK 407
++ + +++L I L E+ +PLL+ V +++ + M H+PSP
Sbjct: 303 AIMNFKKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPV 362
Query: 408 VGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIH 467
K + E Y G D + + CDP GPLM + +KM T D +F+AFGRV SG +
Sbjct: 363 TAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVS 422
Query: 468 AGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKT 527
G V+++G NYT +ED + + R + + RY + VP GN V + GVDQ +VKT
Sbjct: 423 TGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKT 482
Query: 528 ATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVE 587
TIT E A R +KF+ + V+++AVE NP++LPK+++GL+++ KS P + +E
Sbjct: 483 GTITT---FEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIE 539
Query: 588 ESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK 647
ESGEH+I G GEL+L+ + DL + ++ I IK +DPVV++ ETV E S++ C +++PNK
Sbjct: 540 ESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKH 599
Query: 648 NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGP 707
N++ M A P GLAEDI+ V K+ + KY+WD+ AR IW FGPD TGP
Sbjct: 600 NRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGP 659
Query: 708 NILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLH 767
NIL D T + L +KDS+V GFQW T+EG LC+E +R V+F + D + + +H
Sbjct: 660 NILTDITKGVQY----LNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIH 715
Query: 768 RGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAP 827
RGGGQIIPTARR +Y++ L A PRLMEP Y VE+Q P V +Y VL R+RGHV +++
Sbjct: 716 RGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
Query: 828 IPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLE 887
+ G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP D S RP
Sbjct: 776 VAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSS--RP-- 831
Query: 888 PQPAPHLAREFMIKTRRRKGLSEDV-SISKFFD 919
+ + +TR+RKGL E + ++ F D
Sbjct: 832 --------SQVVAETRKRKGLKEGIPALDNFLD 856
>gi|94966754 elongation factor Tu GTP binding domain containing 1
isoform 1 [Homo sapiens]
Length = 1120
Score = 173 bits (439), Expect = 6e-43
Identities = 122/419 (29%), Positives = 196/419 (46%), Gaps = 52/419 (12%)
Query: 81 MDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQ 140
+D + L N+ IRN+ + H+ HGKT DCLI ++ I R L Y D EQ
Sbjct: 6 LDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLIS-SNGIISSRLAGKLRYMDSREDEQ 64
Query: 141 ERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGV 200
RG+ +KS+ +++ T + YL N++D+PGHV+FS EV+ +RI DG ++ +DA EGV
Sbjct: 65 IRGITMKSSAISLHYA-TGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGV 123
Query: 201 MLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYST- 259
T+ +++ A E + + INKIDRLI+ELK P +AY L++I++++N L T
Sbjct: 124 CPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTLFTS 183
Query: 260 ------------------------------------DENLILSPLLGNVCFSSSQYSICF 283
D +L SP GNV F+S+ F
Sbjct: 184 KVLEERAERETESQVNPNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGF 243
Query: 284 TLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLY 343
+ FA+IY+ G I + K LWGD Y N K +K K + FV+ ILE ++
Sbjct: 244 GIEHFARIYSQKIG-IKKEVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIW 302
Query: 344 KILAQVVGDVDTSLPRTLDELGIHL-TKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQH 402
+ V+ + + + LG+ + +E + + + +C ++ + M Q
Sbjct: 303 SLYDAVLKKDKDKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQK 362
Query: 403 IPSPKVGAKPKIEHTY-TGGVDSD--------LGEAMSDC--DPDGPLMCHTTKMYSTD 450
+PSP ++E TG D L A C + P++ +KM++ D
Sbjct: 363 LPSPLDITAERVERLMCTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVD 421
Score = 166 bits (421), Expect = 7e-41
Identities = 153/601 (25%), Positives = 255/601 (42%), Gaps = 152/601 (25%)
Query: 455 FHAFGRVLSGTIHAGQPVKVLGENYT------------------LEDEEDSQICTVGRLW 496
F AF RV SG G+ + VLG Y+ L C + L+
Sbjct: 505 FIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLY 564
Query: 497 ISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIA 556
+ + R + VP GN + I G+ ++K+AT+ F PL F T ++++A
Sbjct: 565 LLMGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCSL---PSCPPFIPLNFEATPIVRVA 621
Query: 557 VEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEI 616
VEP +PSE+P+++ G++ +N++ P + ++E+GEHV++ GE++L + DL++ +++I
Sbjct: 622 VEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERFAKI 681
Query: 617 DIKVADPVVTFCETVVETSSLKCFAE---------------------------------- 642
I V++P++ F ET+ + + E
Sbjct: 682 HISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLIT 741
Query: 643 --TPNKKNKITMIAEPLEKGLAE------DIENEVVQITWN--------------RKKLG 680
TPNK +++ A PL + + + D+ + Q+T + ++K+
Sbjct: 742 ITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKIW 801
Query: 681 EFFQTKYDWDLLAAR------SIWAFGPDATGPNILV-------DDTLPSEVDKALLGSV 727
E F+ K + L R IW+FGP GPNILV + DKA +
Sbjct: 802 E-FKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKSEDFQNSVWTGPADKASKEAS 860
Query: 728 K-----DSIVQGFQWGTREGPLCDELIRNVKFKI---------------LDAVVAQEPLH 767
+ +SIV GFQ T GP+C+E + V F + L +E
Sbjct: 861 RYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQGASDLAKEGQEENET 920
Query: 768 RGGGQIIPTARRVVYSAFLMATPRLME--------PY-------------YFVEVQAPAD 806
GG + AF T + E P+ Y ++V+ P
Sbjct: 921 CSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQLIATMKEACRYALQVK-PQR 979
Query: 807 CVSAVYT---------------VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETD 851
++A+YT VL++R G V Q+ G+ ++ IKA +P +SFGF +
Sbjct: 980 LMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADE 1039
Query: 852 LRTHTQGQAFSLSVFHHWQIVPGDPL----DKSIVIRPLEPQPAPHLAREFMIKTRRRKG 907
+R T G A VF HW+I+P DP + + E + + AR++M R+RKG
Sbjct: 1040 IRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKG 1099
Query: 908 L 908
L
Sbjct: 1100 L 1100
>gi|94966752 elongation factor Tu GTP binding domain containing 1
isoform 2 [Homo sapiens]
Length = 1069
Score = 166 bits (421), Expect = 7e-41
Identities = 153/601 (25%), Positives = 255/601 (42%), Gaps = 152/601 (25%)
Query: 455 FHAFGRVLSGTIHAGQPVKVLGENYT------------------LEDEEDSQICTVGRLW 496
F AF RV SG G+ + VLG Y+ L C + L+
Sbjct: 454 FIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLY 513
Query: 497 ISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIA 556
+ + R + VP GN + I G+ ++K+AT+ F PL F T ++++A
Sbjct: 514 LLMGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCSL---PSCPPFIPLNFEATPIVRVA 570
Query: 557 VEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEI 616
VEP +PSE+P+++ G++ +N++ P + ++E+GEHV++ GE++L + DL++ +++I
Sbjct: 571 VEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERFAKI 630
Query: 617 DIKVADPVVTFCETVVETSSLKCFAE---------------------------------- 642
I V++P++ F ET+ + + E
Sbjct: 631 HISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLIT 690
Query: 643 --TPNKKNKITMIAEPLEKGLAE------DIENEVVQITWN--------------RKKLG 680
TPNK +++ A PL + + + D+ + Q+T + ++K+
Sbjct: 691 ITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKIW 750
Query: 681 EFFQTKYDWDLLAAR------SIWAFGPDATGPNILV-------DDTLPSEVDKALLGSV 727
E F+ K + L R IW+FGP GPNILV + DKA +
Sbjct: 751 E-FKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKSEDFQNSVWTGPADKASKEAS 809
Query: 728 K-----DSIVQGFQWGTREGPLCDELIRNVKFKI---------------LDAVVAQEPLH 767
+ +SIV GFQ T GP+C+E + V F + L +E
Sbjct: 810 RYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQGASDLAKEGQEENET 869
Query: 768 RGGGQIIPTARRVVYSAFLMATPRLME--------PY-------------YFVEVQAPAD 806
GG + AF T + E P+ Y ++V+ P
Sbjct: 870 CSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQLIATMKEACRYALQVK-PQR 928
Query: 807 CVSAVYT---------------VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETD 851
++A+YT VL++R G V Q+ G+ ++ IKA +P +SFGF +
Sbjct: 929 LMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADE 988
Query: 852 LRTHTQGQAFSLSVFHHWQIVPGDPL----DKSIVIRPLEPQPAPHLAREFMIKTRRRKG 907
+R T G A VF HW+I+P DP + + E + + AR++M R+RKG
Sbjct: 989 IRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKG 1048
Query: 908 L 908
L
Sbjct: 1049 L 1049
Score = 137 bits (346), Expect = 4e-32
Identities = 96/343 (27%), Positives = 156/343 (45%), Gaps = 50/343 (14%)
Query: 157 DTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERL 216
D + YL N++D+PGHV+FS EV+ +RI DG ++ +DA EGV T+ +++ A E +
Sbjct: 29 DHGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENI 88
Query: 217 AVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYST----------------- 259
+ INKIDRLI+ELK P +AY L++I++++N L T
Sbjct: 89 RPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTLFTSKVLEERAERETESQVN 148
Query: 260 --------------------DENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDI 299
D +L SP GNV F+S+ F + FA+IY+ G I
Sbjct: 149 PNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIG-I 207
Query: 300 NYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPR 359
+ K LWGD Y N K +K K + FV+ ILE ++ + V+ + +
Sbjct: 208 KKEVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDK 267
Query: 360 TLDELGIHL-TKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTY 418
+ LG+ + +E + + + +C ++ + M Q +PSP ++E
Sbjct: 268 IVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDITAERVERLM 327
Query: 419 -TGGVDSD--------LGEAMSDC--DPDGPLMCHTTKMYSTD 450
TG D L A C + P++ +KM++ D
Sbjct: 328 CTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVD 370
>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
Length = 669
Score = 88.2 bits (217), Expect = 3e-17
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 92 ELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPV 151
E IRN ++ H+ HGK+ D L+E T + + ++ + D L E+ERG+ +K+
Sbjct: 66 ENIRNFSIVAHVDHGKSTLADRLLELTGTIDKTKNNKQVL--DKLQVERERGITVKAQTA 123
Query: 152 TVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHA 211
++ + +GK YL N++DTPGHV+FS EV+ L GV+L +DA EG+ T A
Sbjct: 124 SLFY-NCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLA 182
Query: 212 VQERLAVTVCINKID 226
+ +L+V INKID
Sbjct: 183 FEAQLSVIPVINKID 197
>gi|239756373 PREDICTED: similar to elongation factor Tu GTP binding
domain containing 1 [Homo sapiens]
Length = 263
Score = 84.3 bits (207), Expect = 5e-16
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 69 LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 128
L++ + + + +D + L N+ IRN+ + H+ GKT DCLI ++ I
Sbjct: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183
Query: 129 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 188
L Y D EQ RG+ +KS+ +++ T + YL N++D+PGH++FS +V+ +RI D
Sbjct: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242
Query: 189 GVVLFIDAAEGV 200
G ++ +DA EGV
Sbjct: 243 GCIIVVDAVEGV 254
>gi|239750897 PREDICTED: similar to elongation factor Tu GTP binding
domain containing 1 [Homo sapiens]
Length = 263
Score = 84.3 bits (207), Expect = 5e-16
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 69 LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 128
L++ + + + +D + L N+ IRN+ + H+ GKT DCLI ++ I
Sbjct: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183
Query: 129 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 188
L Y D EQ RG+ +KS+ +++ T + YL N++D+PGH++FS +V+ +RI D
Sbjct: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242
Query: 189 GVVLFIDAAEGV 200
G ++ +DA EGV
Sbjct: 243 GCIIVVDAVEGV 254
>gi|239745282 PREDICTED: similar to elongation factor Tu GTP binding
domain containing 1 [Homo sapiens]
Length = 263
Score = 84.3 bits (207), Expect = 5e-16
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 69 LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 128
L++ + + + +D + L N+ IRN+ + H+ GKT DCLI ++ I
Sbjct: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183
Query: 129 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 188
L Y D EQ RG+ +KS+ +++ T + YL N++D+PGH++FS +V+ +RI D
Sbjct: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242
Query: 189 GVVLFIDAAEGV 200
G ++ +DA EGV
Sbjct: 243 GCIIVVDAVEGV 254
>gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo
sapiens]
Length = 732
Score = 70.5 bits (171), Expect = 7e-12
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 94 IRNVTLCGHLHHGKTCFVDCLIEQT-HPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVT 152
IRN+ + H+ GKT + ++ + + D TD + E+ERG+ I+S VT
Sbjct: 70 IRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVT 129
Query: 153 VVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAV 212
D KG Y N++DTPGHV+F+ EV LR+ DG V DA+ GV T + + A
Sbjct: 130 F---DWKG--YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQAD 184
Query: 213 QERLAVTVCINKIDR 227
+ + +NK+D+
Sbjct: 185 KHNIPRICFLNKMDK 199
Score = 65.1 bits (157), Expect = 3e-10
Identities = 84/407 (20%), Positives = 165/407 (40%), Gaps = 72/407 (17%)
Query: 492 VGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIV-------KTATITEPRGNEEAQIFRP 544
+ RL + A H+E+ + AGN L G+ K++ + R E +
Sbjct: 363 ISRLLLPFADQHVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKH 422
Query: 545 LKFNTTSVIKIA------------VEPVNPSELPKMLDGLRKVNKSYPSLTTKVE-ESGE 591
+ N + +A +EP + S+ P + L+ + + PSL +++ +SG+
Sbjct: 423 RQNNEAERLLLAGVEIPEPVFFCTIEPPSLSKQPDLEHALKCLQREDPSLKVRLDPDSGQ 482
Query: 592 HVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKIT 651
V+ G GEL+++ ++HD K ++ + V + ET++ +
Sbjct: 483 TVLCGMGELHIE-IIHDRIKREYGLETYLGPLQVAYRETILNS----------------V 525
Query: 652 MIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILV 711
+ L++ L + V++ AR I + + ++
Sbjct: 526 RATDTLDRTLGDKRHLVTVEVE--------------------ARPI-----ETSSVMPVI 560
Query: 712 DDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGG 771
+ +++ LL +++I G +GPL I++V + + H G
Sbjct: 561 EFEYAESINEGLLKVSQEAIENGIHSACLQGPLLGSPIQDVAITLHSLTI-----HPGTS 615
Query: 772 QIIPTA--RRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIP 829
+ +A R V A A +++EP +EV D +S V LA+RRG++ +
Sbjct: 616 TTMISACVSRCVQKALKKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQ 675
Query: 830 GSPLYTIKAFIPAIDSFGFETDLRTHTQGQA-FSLSVFHHWQIVPGD 875
+ + + F+P + G+ T LRT T G A F+L + + + P D
Sbjct: 676 DNKV--VIGFVPLAEIMGYSTVLRTLTSGSATFALELSTYQAMNPQD 720
>gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo
sapiens]
Length = 513
Score = 70.5 bits (171), Expect = 7e-12
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 94 IRNVTLCGHLHHGKTCFVDCLIEQT-HPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVT 152
IRN+ + H+ GKT + ++ + + D TD + E+ERG+ I+S VT
Sbjct: 70 IRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVT 129
Query: 153 VVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAV 212
D KG Y N++DTPGHV+F+ EV LR+ DG V DA+ GV T + + A
Sbjct: 130 F---DWKG--YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQAD 184
Query: 213 QERLAVTVCINKIDR 227
+ + +NK+D+
Sbjct: 185 KHNIPRICFLNKMDK 199
>gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo
sapiens]
Length = 779
Score = 70.5 bits (171), Expect = 7e-12
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 94 IRNVTLCGHLHHGKTCFVDCLIEQT-HPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVT 152
IRN+ + H+ GKT + ++ + + D TD + E+ERG+ I+S VT
Sbjct: 70 IRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVT 129
Query: 153 VVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAV 212
D KG Y N++DTPGHV+F+ EV LR+ DG V DA+ GV T + + A
Sbjct: 130 F---DWKG--YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQAD 184
Query: 213 QERLAVTVCINKIDR 227
+ + +NK+D+
Sbjct: 185 KHNIPRICFLNKMDK 199
Score = 67.8 bits (164), Expect = 5e-11
Identities = 92/441 (20%), Positives = 176/441 (39%), Gaps = 81/441 (18%)
Query: 458 FGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLI 517
F R+ SGTI + + N T + RL + A H+E+ + AGN L
Sbjct: 385 FMRIYSGTIKPQLAIHNINGNCTER---------ISRLLLPFADQHVEIPSLTAGNIALT 435
Query: 518 EGVDQPIV-------KTATITEPRGNEEAQIFRPLKFNTTSVIKIA------------VE 558
G+ K++ + R E + + N + +A +E
Sbjct: 436 VGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLLAGVEIPEPVFFCTIE 495
Query: 559 PVNPSELPKMLDGLRKVNKSYPSLTTKVE-ESGEHVILGTGELYLDCVMHDLRKMYSEID 617
P + S+ P + L+ + + PSL +++ +SG+ V+ G GEL+++ ++HD K ++
Sbjct: 496 PPSLSKQPDLEHALKCLQREDPSLKVRLDPDSGQTVLCGMGELHIE-IIHDRIKREYGLE 554
Query: 618 IKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRK 677
+ V + ET++ + + L++ L + V++
Sbjct: 555 TYLGPLQVAYRETILNS----------------VRATDTLDRTLGDKRHLVTVEVE---- 594
Query: 678 KLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQW 737
AR I + + +++ +++ LL +++I G
Sbjct: 595 ----------------ARPI-----ETSSVMPVIEFEYAESINEGLLKVSQEAIENGIHS 633
Query: 738 GTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTA--RRVVYSAFLMATPRLMEP 795
+GPL I++V + + H G + +A R V A A +++EP
Sbjct: 634 ACLQGPLLGSPIQDVAITLHSLTI-----HPGTSTTMISACVSRCVQKALKKADKQVLEP 688
Query: 796 YYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTH 855
+EV D +S V LA+RRG++ + + + + F+P + G+ T LRT
Sbjct: 689 LMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDNKV--VIGFVPLAEIMGYSTVLRTL 746
Query: 856 TQGQA-FSLSVFHHWQIVPGD 875
T G A F+L + + + P D
Sbjct: 747 TSGSATFALELSTYQAMNPQD 767
>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
Length = 751
Score = 67.8 bits (164), Expect = 5e-11
Identities = 90/370 (24%), Positives = 143/370 (38%), Gaps = 66/370 (17%)
Query: 499 VARYHIE----VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIK 554
+AR H + V V AG+ + G+D T T G I P VI
Sbjct: 398 LARMHADMMEDVEEVYAGDICALFGIDCASGDTFTDKANSGLSMESIHVP-----DPVIS 452
Query: 555 IAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVE-ESGEHVILGTGELYLDCVMHDLRKMY 613
IA++P N ++L K G+ + + P+ + E+ E VI G GEL+L+ L + Y
Sbjct: 453 IAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHLEIYAQRLEREY 512
Query: 614 SEIDIKVADPVVTFCETVVETSSL----KCFAETPNKKNKITMIAEPLEKGLAEDIENEV 669
I P V F ET+ K + + K+ + EPL+ ED
Sbjct: 513 GCPCI-TGKPKVAFRETITAPVPFDFTHKKQSGGAGQYGKVIGVLEPLDP---EDY---- 564
Query: 670 VQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKD 729
TK ++ D+T S + K + +V+
Sbjct: 565 ---------------TKLEFS---------------------DETFGSNIPKQFVPAVE- 587
Query: 730 SIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMAT 789
+GF +GPL + ++F + D A + I + A AT
Sbjct: 588 ---KGFLDACEKGPLSGHKLSGLRFVLQDG--AHHMVDSNEISFIRAGEGALKQALANAT 642
Query: 790 PRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFE 849
++EP VEV AP + V + RR G +T + +T+ A +P D FG+
Sbjct: 643 LCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGV--EDYFTLYADVPLNDMFGYS 700
Query: 850 TDLRTHTQGQ 859
T+LR+ T+G+
Sbjct: 701 TELRSCTEGK 710
Score = 66.6 bits (161), Expect = 1e-10
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 91 SELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIR----KRYDQDLCYTDILFTEQERGVGI 146
+E IRN+ + H+ GKT + ++ T + K D D + E++RG+ I
Sbjct: 43 NEKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITI 102
Query: 147 KSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTER 206
+S + D NI+DTPGHV+F+ EV LR+ DG VL + A GV T
Sbjct: 103 QSAATYTMWKDVN-----INIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMT 157
Query: 207 LIKHAVQERLAVTVCINKIDRL 228
+ + + + INK+DR+
Sbjct: 158 VNRQMKRYNVPFLTFINKLDRM 179
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 55.1 bits (131), Expect = 3e-07
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 97 VTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLP 156
VT+ GH+ HGKT +D + RK + + Q G + S P
Sbjct: 183 VTIMGHVDHGKTTLLD--------KFRKT---QVAAVETGGITQHIGAFLVSLP------ 225
Query: 157 DTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERL 216
G+ F +DTPGH FS G +++D VVL + A +GVM T I+HA ++
Sbjct: 226 --SGEKITF--LDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQV 281
Query: 217 AVTVCINKIDR 227
+ + +NK D+
Sbjct: 282 PIILAVNKCDK 292
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 55.1 bits (131), Expect = 3e-07
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 97 VTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLP 156
VT+ GH+ HGKT +D + RK + + Q G + S P
Sbjct: 183 VTIMGHVDHGKTTLLD--------KFRKT---QVAAVETGGITQHIGAFLVSLP------ 225
Query: 157 DTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERL 216
G+ F +DTPGH FS G +++D VVL + A +GVM T I+HA ++
Sbjct: 226 --SGEKITF--LDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQV 281
Query: 217 AVTVCINKIDR 227
+ + +NK D+
Sbjct: 282 PIILAVNKCDK 292
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 46.6 bits (109), Expect = 1e-04
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 90 NSELIRNVTLC--GHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIK 147
N+E +R +C GH+ GKT +D ++R + QD I T+Q +G
Sbjct: 625 NTEKLRAPIICVLGHVDTGKTKILD--------KLRHTHVQDGEAGGI--TQQ---IGAT 671
Query: 148 STPVTVVLPDTKGKSYLFN---------IMDTPGHVNFSDEVTAGLRISDGVVLFIDAAE 198
+ P+ + TK I+DTPGH +FS+ G + D +L +D
Sbjct: 672 NVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMH 731
Query: 199 GVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLR 244
G+ T I ++ V +NKIDRL K P +D L+
Sbjct: 732 GLEPQTIESINLLKSKKCPFIVALNKIDRLYDWKKSPDSDVAATLK 777
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 40.0 bits (92), Expect = 0.010
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 28/184 (15%)
Query: 39 GPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTV-------YEMDFLADL--MD 89
GP +E + D P T + + + + P V ++D A+L
Sbjct: 154 GPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQ 213
Query: 90 NSELIRNVTLCGHLHHGKTCFVD---CLIEQTHPEIRKRYDQD--------LCYTDILFT 138
+ + N+ + GH+ GK+ + L+ + +Y+Q+ Y +L
Sbjct: 214 GGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDE 273
Query: 139 ---EQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFID 195
E+ERGV + V + + + + +MD PGH +F + G +D VL +D
Sbjct: 274 TGEERERGV-----TMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVD 328
Query: 196 AAEG 199
A+ G
Sbjct: 329 ASRG 332
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 40.0 bits (92), Expect = 0.010
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 28/184 (15%)
Query: 39 GPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTV-------YEMDFLADL--MD 89
GP +E + D P T + + + + P V ++D A+L
Sbjct: 196 GPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQ 255
Query: 90 NSELIRNVTLCGHLHHGKTCFVD---CLIEQTHPEIRKRYDQD--------LCYTDILFT 138
+ + N+ + GH+ GK+ + L+ + +Y+Q+ Y +L
Sbjct: 256 GGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDE 315
Query: 139 ---EQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFID 195
E+ERGV + V + + + + +MD PGH +F + G +D VL +D
Sbjct: 316 TGEERERGV-----TMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVD 370
Query: 196 AAEG 199
A+ G
Sbjct: 371 ASRG 374
>gi|34147630 Tu translation elongation factor, mitochondrial
precursor [Homo sapiens]
Length = 455
Score = 39.7 bits (91), Expect = 0.013
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 96 NVTLCGHLHHGKTCF---VDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVT 152
NV GH+ HGKT + ++ + K+Y++ D E+ RG+ I + V
Sbjct: 62 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEE----IDNAPEERARGITINAAHVE 117
Query: 153 VVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAV 212
T + Y D PGH ++ + G DG +L + A +G M T + A
Sbjct: 118 Y---STAARHYAHT--DCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLAR 172
Query: 213 QERLA-VTVCINKID 226
Q + V V +NK D
Sbjct: 173 QIGVEHVVVYVNKAD 187
>gi|239757543 PREDICTED: similar to eukaryotic translation
elongation factor 1 alpha 2 [Homo sapiens]
Length = 444
Score = 34.7 bits (78), Expect = 0.43
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 19/118 (16%)
Query: 96 NVTLCGHLHHGKTCFVDCLI--------------EQTHPEIRKRYDQDLCYTDILFTEQE 141
N+ + GH+ GK+ LI E+ E+ K + D L E+E
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68
Query: 142 RGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
RG+ I + L + Y I+D PGH +F + G +D VL + A G
Sbjct: 69 RGITID-----ISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121
>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
sapiens]
Length = 462
Score = 34.7 bits (78), Expect = 0.43
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 19/118 (16%)
Query: 96 NVTLCGHLHHGKTCFVDCLI--------------EQTHPEIRKRYDQDLCYTDILFTEQE 141
N+ + GH+ GK+ LI E+ E+ K + D L E+E
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68
Query: 142 RGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
RG+ I + L + Y I+D PGH +F + G +D VL + A G
Sbjct: 69 RGITID-----ISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121
>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
sapiens]
Length = 463
Score = 34.7 bits (78), Expect = 0.43
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 19/118 (16%)
Query: 96 NVTLCGHLHHGKTCFVDCLI--------------EQTHPEIRKRYDQDLCYTDILFTEQE 141
N+ + GH+ GK+ LI E+ E+ K + D L E+E
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68
Query: 142 RGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
RG+ I + L + Y I+D PGH +F + G +D VL + A G
Sbjct: 69 RGITID-----ISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121
>gi|46094014 peptide chain release factor 3 [Homo sapiens]
Length = 628
Score = 33.9 bits (76), Expect = 0.73
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 96 NVTLCGHLHHGK----------TCFVDCLIEQTHPEIRKRYDQDLCYTD-ILFTEQERGV 144
NV GH+ GK T VD + + K +++ Y L T QE
Sbjct: 205 NVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 264
Query: 145 GIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
K+ V +T+ K F I+D PGH +F + G +D VL I A +G
Sbjct: 265 KGKTVEVGRAYFETERKH--FTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 317
>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
Length = 499
Score = 33.9 bits (76), Expect = 0.73
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 96 NVTLCGHLHHGK----------TCFVDCLIEQTHPEIRKRYDQDLCYTD-ILFTEQERGV 144
NV GH+ GK T VD + + K +++ Y L T QE
Sbjct: 76 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 135
Query: 145 GIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
K+ V +T+ K F I+D PGH +F + G +D VL I A +G
Sbjct: 136 KGKTVEVGRAYFETEKKH--FTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 188
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 33.9 bits (76), Expect = 0.73
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 96 NVTLCGHLHHGK----------TCFVDCLIEQTHPEIRKRYDQDLCYTD-ILFTEQERGV 144
NV GH+ GK T VD + + K +++ Y L T QE
Sbjct: 213 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 272
Query: 145 GIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
K+ V +T+ K F I+D PGH +F + G +D VL I A +G
Sbjct: 273 KGKTVEVGRAYFETEKKH--FTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 325
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 33.9 bits (76), Expect = 0.73
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 96 NVTLCGHLHHGK----------TCFVDCLIEQTHPEIRKRYDQDLCYTD-ILFTEQERGV 144
NV GH+ GK T VD + + K +++ Y L T QE
Sbjct: 214 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 273
Query: 145 GIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG 199
K+ V +T+ K F I+D PGH +F + G +D VL I A +G
Sbjct: 274 KGKTVEVGRAYFETEKKH--FTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 326
>gi|6912246 CD3E antigen, epsilon polypeptide associated protein
[Homo sapiens]
Length = 510
Score = 33.1 bits (74), Expect = 1.2
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 28 KKYYPTAEEVYGPEVETIVQEE-DTQPLTEPIIKPVKTKK 66
K+ P +E + PE +T+ QE+ +T+PL + ++ P K +K
Sbjct: 252 KRKKPKGKETFEPEDKTVKQEQINTEPLEDTVLSPTKKRK 291
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 32.7 bits (73), Expect = 1.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 2 DDDDDDDDVGDHDDDHPGMEVVLHEDKKYY 31
DDDDDDDD D +DD + K+YY
Sbjct: 266 DDDDDDDDDDDDEDDEDEEDGEEENQKRYY 295
Score = 32.0 bits (71), Expect = 2.8
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 2 DDDDDDDDVGDHDDDHPGMEVVLHEDKKYY 31
DDDDDDDD D D+D E E++K Y
Sbjct: 265 DDDDDDDDDDDDDEDDEDEEDGEEENQKRY 294
>gi|54607086 eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
Length = 596
Score = 32.7 bits (73), Expect = 1.6
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 14/145 (9%)
Query: 96 NVTLCGHLHHGKTCFVDCLIEQT-------HPEIRKR-YDQDLCYTDILFTEQERGVGIK 147
NV + GH+ GKT L P+ R+R DL ++ F+
Sbjct: 9 NVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFS--CFSVPLPARLRS 66
Query: 148 STPVTVVLPDTK---GKSYL-FNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLN 203
S P P+ + G+ L ++D PGH + + G +I D ++L ID +G+
Sbjct: 67 SLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQ 126
Query: 204 TERLIKHAVQERLAVTVCINKIDRL 228
+ + + V +NKID L
Sbjct: 127 SAECLVIGQIACQKLVVVLNKIDLL 151
>gi|4885351 glutamic pyruvate transaminase [Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 2.1
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 756 ILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVL 815
+L +VA E H G +IP + +YSA L + YY E +A A V+ ++ L
Sbjct: 167 VLKLLVAGEG-HTRTGVLIPIPQYPLYSATLAELGAVQVDYYLDEERAWALDVAELHRAL 225
Query: 816 ARRRGHVTQDAPI---PGSPLYTI--KAFIPAIDSFGFETDL 852
+ R H A PG+P + + I A+ F FE L
Sbjct: 226 GQARDHCRPRALCVINPGNPTGQVQTRECIEAVIRFAFEERL 267
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,072,275
Number of Sequences: 37866
Number of extensions: 1758312
Number of successful extensions: 5053
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4855
Number of HSP's gapped (non-prelim): 153
length of query: 937
length of database: 18,247,518
effective HSP length: 112
effective length of query: 825
effective length of database: 14,006,526
effective search space: 11555383950
effective search space used: 11555383950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.