Guide to the Human Genome
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Name: GPT Sequence: fasta or formatted (496aa) NCBI GI: 4885351
Description:

glutamic pyruvate transaminase

Referenced in:

Amino Acid Catabolism
Amino Acid Biosynthesis and Selected Derivatives
Proteins Measured in Common Diagnostic Tests

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         51           2
 C cysteine            2.0         10           1
 D aspartate           4.0         20           2
 E glutamate           6.9         34           2
 F phenylalanine       4.2         21           2
 G glycine             7.7         38           2
 H histidine           1.8          9           1
 I isoleucine          3.6         18           1
 K lysine              3.2         16           2
 L leucine            11.1         55           3
 M methionine          2.4         12           1
 N asparagine          2.4         12           2
 P proline             6.7         33           2
 Q glutamine           6.0         30           3
 R arginine            7.5         37           2
 S serine              5.0         25           2
 T threonine           3.6         18           1
 V valine              8.3         41           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.0         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamic pyruvate transaminase 
GPT2                  0.709   glutamic pyruvate transaminase 2 isoform 1 
GPT2                  0.623   glutamic pyruvate transaminase 2 isoform 2 
TAT                   0.048   tyrosine aminotransferase 
ACCS                  0.044   1-aminocyclopropane-1-carboxylate synthase homolog ...
ACCS                  0.044   1-aminocyclopropane-1-carboxylate synthase homolog [...
ACCSL                 0.032   1-aminocyclopropane-1-carboxylate synthase homolog ...
CCBL1                 0.018   kynurenine aminotransferase I isoform a 
CCBL1                 0.018   kynurenine aminotransferase I isoform a 
CCBL2                 0.017   kynurenine aminotransferase III isoform 1 
CCBL2                 0.017   kynurenine aminotransferase III isoform 2 
CCBL1                 0.015   kynurenine aminotransferase I isoform b 
EFTUD2                0.007   elongation factor Tu GTP binding domain containing ...
EFTUD2                0.007   elongation factor Tu GTP binding domain containing ...
TTC34                 0.004   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
TTC34                 0.004   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
LOC100287898          0.004   PREDICTED: hypothetical protein XP_002342056 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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