Guide to the Human Genome
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Name: C6orf203 Sequence: fasta or formatted (240aa) NCBI GI: 215599508
Description:

hypothetical protein LOC51250 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {245aa} hypothetical protein LOC51250 isoform b
alt mRNA {240aa} hypothetical protein LOC51250 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          8           1
 C cysteine            0.8          2           1
 D aspartate           5.8         14           2
 E glutamate           9.6         23           3
 F phenylalanine       3.3          8           1
 G glycine             4.6         11           1
 H histidine           0.8          2           2
 I isoleucine          2.9          7           1
 K lysine             12.5         30           2
 L leucine            12.9         31           3
 M methionine          2.1          5           1
 N asparagine          2.9          7           1
 P proline             3.3          8           1
 Q glutamine           1.2          3           1
 R arginine            6.7         16           2
 S serine              8.8         21           2
 T threonine           5.4         13           1
 V valine              7.1         17           2
 W tryptophan          2.1          5           1
 Y tyrosine            3.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC51250 isoform a 
C6orf203              1.000   hypothetical protein LOC51250 isoform b 
C6orf203              1.000   hypothetical protein LOC51250 isoform a 
HMGB1                 0.031   high-mobility group box 1 
LOXHD1                0.026   lipoxygenase homology domains 1 isoform 1 
MYO5B                 0.024   myosin VB 
SUPT5H                0.024   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.024   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.024   suppressor of Ty 5 homolog isoform a 
TMX4                  0.024   thioredoxin-related transmembrane protein 4 
LOC645490             0.020   PREDICTED: similar to hCG1991922 
LOC645490             0.020   PREDICTED: similar to hCG1991922 
SUPT5H                0.020   suppressor of Ty 5 homolog isoform b 
HMGB1L1               0.020   high-mobility group box 1-like 1 
ZEB1                  0.020   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.020   zinc finger E-box binding homeobox 1 isoform b [Hom...
ARID4B                0.020   AT rich interactive domain 4B isoform 2 
ARID4B                0.020   AT rich interactive domain 4B isoform 1 
DAXX                  0.018   death-domain associated protein isoform a 
DAXX                  0.018   death-domain associated protein isoform a 
DAXX                  0.018   death-domain associated protein isoform b 
ZC3H7B                0.018   zinc finger CCCH-type containing 7B 
MFAP1                 0.018   microfibrillar-associated protein 1 
MTERFD2               0.018   MTERF domain containing 2 
KIF5C                 0.018   kinesin family member 5C 
MYH10                 0.018   myosin, heavy polypeptide 10, non-muscle 
ATRX                  0.018   transcriptional regulator ATRX isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 1 
CALCOCO1              0.018   coiled-coil transcriptional coactivator isoform 2 [...
GTF3C3                0.018   general transcription factor IIIC, polypeptide 3, 102...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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