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Search of human proteins with 21553329
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21553329 family with sequence similarity 84, member A [Homo
sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21553329 family with sequence similarity 84, member A [Homo s... 611 e-175
gi|28557798 family with sequence similarity 84, member B [Homo s... 242 2e-64
gi|149588791 retinoic acid receptor responder (tazarotene induce... 45 8e-05
gi|110431364 GLIS family zinc finger 2 [Homo sapiens] 38 0.012
gi|148727370 immediate early response 5-like [Homo sapiens] 35 0.060
gi|189571621 HRAS-like suppressor 3 [Homo sapiens] 34 0.13
gi|189571618 HRAS-like suppressor 3 [Homo sapiens] 34 0.13
gi|223633941 hypothetical protein LOC389730 [Homo sapiens] 33 0.39
gi|91206406 hypothetical protein LOC642265 [Homo sapiens] 33 0.39
gi|169174618 PREDICTED: family with sequence similarity 75, memb... 33 0.39
gi|239743732 PREDICTED: family with sequence similarity 75, memb... 33 0.39
gi|153791826 hypothetical protein LOC26165 [Homo sapiens] 33 0.39
gi|146231958 hypothetical protein LOC647060 [Homo sapiens] 33 0.39
gi|165377334 hypothetical protein LOC727905 [Homo sapiens] 33 0.39
gi|133892686 hypothetical protein LOC727830 [Homo sapiens] 32 0.51
gi|122937424 one cut homeobox 3 [Homo sapiens] 32 0.66
gi|195947376 forkhead box I2 [Homo sapiens] 31 1.5
gi|118572606 hemicentin 1 [Homo sapiens] 31 1.5
gi|8923526 HRAS-like suppressor 2 [Homo sapiens] 31 1.5
gi|29826341 calmodulin binding transcription activator 2 [Homo s... 30 2.5
gi|94536854 thrombospondin, type I, domain containing 4 [Homo sa... 30 3.3
gi|46249410 lecithin retinol acyltransferase [Homo sapiens] 30 3.3
gi|9966795 phospholipid scramblase 2 [Homo sapiens] 30 3.3
gi|7662352 RUN and FYVE domain containing 3 isoform 2 [Homo sapi... 29 4.3
gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo sap... 29 4.3
gi|23110964 cathepsin W preproprotein [Homo sapiens] 29 4.3
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens] 29 4.3
gi|223468617 family with sequence similarity 75, member C1 [Homo... 29 5.6
gi|37577159 calcium-sensing receptor [Homo sapiens] 29 5.6
gi|91208420 bassoon protein [Homo sapiens] 29 5.6
>gi|21553329 family with sequence similarity 84, member A [Homo
sapiens]
Length = 292
Score = 611 bits (1575), Expect = e-175
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MGNQLDRITHLNYSELPTGDPSGIEKDELRVGVAYFFSDDEEDLDERGQPDKFGVKAPPG 60
MGNQLDRITHLNYSELPTGDPSGIEKDELRVGVAYFFSDDEEDLDERGQPDKFGVKAPPG
Sbjct: 1 MGNQLDRITHLNYSELPTGDPSGIEKDELRVGVAYFFSDDEEDLDERGQPDKFGVKAPPG 60
Query: 61 CTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIFSKVSGGPQGADLSVYAVTALPALC 120
CTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIFSKVSGGPQGADLSVYAVTALPALC
Sbjct: 61 CTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIFSKVSGGPQGADLSVYAVTALPALC 120
Query: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNS 180
EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNS
Sbjct: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNS 180
Query: 181 WYRYRPLVAELVVQNACGHLGLKSEEICWTNSESFAAWCRFGKREFKAGGEVPAGTQPPQ 240
WYRYRPLVAELVVQNACGHLGLKSEEICWTNSESFAAWCRFGKREFKAGGEVPAGTQPPQ
Sbjct: 181 WYRYRPLVAELVVQNACGHLGLKSEEICWTNSESFAAWCRFGKREFKAGGEVPAGTQPPQ 240
Query: 241 QQYYLKVHLGENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDDKE 292
QQYYLKVHLGENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDDKE
Sbjct: 241 QQYYLKVHLGENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDDKE 292
>gi|28557798 family with sequence similarity 84, member B [Homo
sapiens]
Length = 310
Score = 242 bits (618), Expect = 2e-64
Identities = 136/295 (46%), Positives = 174/295 (58%), Gaps = 35/295 (11%)
Query: 1 MGNQLDRITHLNYSELPTGDPSGIEKDE-LRVGVAYFFSDDEEDLDER---------GQP 50
MGNQ++++THL+Y E+PT DP+G+++D+ R+GV+Y FS+D+ED++ + G P
Sbjct: 1 MGNQVEKLTHLSYKEVPTADPTGVDRDDGPRIGVSYIFSNDDEDVEPQPPPQGPDGGGLP 60
Query: 51 DKFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIFSKVSGGPQGADLSV 110
D G PP P P P H E + S F ECI+ K S P A LS
Sbjct: 61 D--GGDGPPPPQPQPYDPRLH-----------EVECSVFYRDECIYQK-SFAPGSAALST 106
Query: 111 YAVTALPALCEPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAG 170
Y L C+PGDL+E + A PHWAVYVG Q++HLH+ E+ L +A
Sbjct: 107 YTPENLLNKCKPGDLVEFV-------SQAQYPHWAVYVGNFQVVHLHRLEVINSFLTDAS 159
Query: 171 AANVGRVVNSWYRYRPLVAELVVQNACGHLGLKSEEICWTNSESFAAWCRFGKREFKAGG 230
GRVVN YRY+PL + VV+NA H+G K E+ W NSESFAAWCR+GKREFK GG
Sbjct: 160 QGRRGRVVNDLYRYKPLSSSAVVRNALAHVGAKERELSWRNSESFAAWCRYGKREFKIGG 219
Query: 231 EVPAGTQPPQQQYYLKVHLGENKVHTARFHSLEDLIREKRRIDASGRLRVLQELA 285
E+ G QP Y L++ L + HT F SLEDLI EKRR D GR VLQELA
Sbjct: 220 ELRIGKQP----YRLQIQLSAQRSHTLEFQSLEDLIMEKRRNDQIGRAAVLQELA 270
>gi|149588791 retinoic acid receptor responder (tazarotene induced)
3 [Homo sapiens]
Length = 164
Score = 45.1 bits (105), Expect = 8e-05
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 29/128 (22%)
Query: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHL-------------------HQGEI 161
+PGDL+E+ L HWA+Y+G G +IHL + E+
Sbjct: 9 KPGDLIEIFRLG--------YEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60
Query: 162 RQDSLYEAGAANVGRVVNSW-YRYRPLVAELVVQNACGHLGLKSE-EICWTNSESFAAWC 219
+++ L + RV NS + Y+P E+++ +A +G K + I N E F
Sbjct: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120
Query: 220 RFGKREFK 227
R+GK K
Sbjct: 121 RYGKSRCK 128
>gi|110431364 GLIS family zinc finger 2 [Homo sapiens]
Length = 524
Score = 37.7 bits (86), Expect = 0.012
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 127 ELLWLQPAPEPPAPAPHWAVYVGGGQII 154
ELL L+P P+PP PAP YV G QII
Sbjct: 327 ELLQLRPPPKPPLPAPDGGPYVSGAQII 354
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 35.4 bits (80), Expect = 0.060
Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 66 ESPSRHQHHLLHQL-------VLNETQFSAFRGQECIFSKVSGGPQGADLSVYAVTALPA 118
E +RHQ H LHQL L++ Q A RG C + +G P G ++ + A
Sbjct: 104 EPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRG--CAAAAAAGAPAGGAGALSELPGCAA 161
Query: 119 LCEP------GDLLELLWLQPAPEP---PAPAP 142
L P G LE L PAP P P PAP
Sbjct: 162 LQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAP 194
>gi|189571621 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHL-------------------HQGEI 161
+PGDL+E+ +P HWA+YVG G ++HL + +
Sbjct: 9 KPGDLIEIF--RPFYR------HWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
Query: 162 RQDSLYEAGAANVGRVVNSW-YRYRPLVAELVVQNACGHLGLK-SEEICWTNSESFAAWC 219
+++ LY+ ++ +V N +Y PL ++Q A +G + ++ N E F
Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
Query: 220 RFG 222
R+G
Sbjct: 121 RYG 123
>gi|189571618 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 34.3 bits (77), Expect = 0.13
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHL-------------------HQGEI 161
+PGDL+E+ +P HWA+YVG G ++HL + +
Sbjct: 9 KPGDLIEIF--RPFYR------HWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
Query: 162 RQDSLYEAGAANVGRVVNSW-YRYRPLVAELVVQNACGHLGLK-SEEICWTNSESFAAWC 219
+++ LY+ ++ +V N +Y PL ++Q A +G + ++ N E F
Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
Query: 220 RFG 222
R+G
Sbjct: 121 RYG 123
>gi|223633941 hypothetical protein LOC389730 [Homo sapiens]
Length = 1343
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 110 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 166
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 167 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 206
>gi|91206406 hypothetical protein LOC642265 [Homo sapiens]
Length = 1347
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 110 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 166
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 167 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 206
>gi|169174618 PREDICTED: family with sequence similarity 75, member
A4 isoform 2 [Homo sapiens]
Length = 1272
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 35 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 91
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 92 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 131
>gi|239743732 PREDICTED: family with sequence similarity 75, member
A4 isoform 1 [Homo sapiens]
Length = 1361
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 124 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 180
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 181 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 220
>gi|153791826 hypothetical protein LOC26165 [Homo sapiens]
Length = 1347
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 110 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 166
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 167 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 206
>gi|146231958 hypothetical protein LOC647060 [Homo sapiens]
Length = 1347
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 110 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 166
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 167 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 206
>gi|165377334 hypothetical protein LOC727905 [Homo sapiens]
Length = 1347
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 110 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQA---KHPQDLA 166
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 167 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 206
>gi|133892686 hypothetical protein LOC727830 [Homo sapiens]
Length = 1347
Score = 32.3 bits (72), Expect = 0.51
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 40 DEEDLDERGQPD---KFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIF 96
D+ D + PD + G +AP G + P +L L + Q + + +
Sbjct: 110 DKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSLLASPDPQA---KHPQDLA 166
Query: 97 SKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
S S GP +S + + P EP LE P+PEPPA PH
Sbjct: 167 STPSPGPMTTSVSSLSASQPP---EPSLPLE----HPSPEPPALFPH 206
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 32.0 bits (71), Expect = 0.66
Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 11/129 (8%)
Query: 58 PPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIFSKVSGGPQGADLSVYAVTALP 117
P P P P R + L + +A ++ GP G +L P
Sbjct: 147 PAAAPPPPPPPQRLAASVSGSFTLMRDERAALASVGHLY-----GPYGKELPAMGSPLSP 201
Query: 118 ALCEPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRV 177
P L L P P PP P P A Y G HL ++ + +E AA +GR
Sbjct: 202 L---PNALPPALHGAPQPPPPPPPPPLAAYGPPG---HLAGDKLLPPAAFEPHAALLGRA 255
Query: 178 VNSWYRYRP 186
++ R P
Sbjct: 256 EDALARGLP 264
>gi|195947376 forkhead box I2 [Homo sapiens]
Length = 318
Score = 30.8 bits (68), Expect = 1.5
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 102 GPQGADLSVYAVTALPALCEPGDL-----LELLWLQ-PAPEP------PAPAPHWAV--Y 147
GP A TA P EPGDL LLW+ PA P P PAP +A Y
Sbjct: 9 GPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPAPPYAAPSY 68
Query: 148 VGGGQIIHLHQGEIRQDS--LYEAGAANVGRVVNSWYRYRPLVAELVVQNA 196
G ++ G D L +G + R+V Y Y L+A + +Q+A
Sbjct: 69 GAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIA-MAIQSA 118
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 30.8 bits (68), Expect = 1.5
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 99 VSGGPQGADLSVYAVTALPALCEPGDLL--ELLWLQPAPEPPAPAPHWAVYVGGGQIIHL 156
+ GG D+SV + + CE L + W + P + A+Y+ GQ +H+
Sbjct: 1548 IKGGNVTTDISVLINSLIKLECETRGLPMPAITWYKDGQ--PIMSSSQALYIDKGQYLHI 1605
Query: 157 HQGEIRQDSLYEAGAANVGRVVNSWYRYRPLVAELVVQN 195
+ ++ + Y ANV + V ++ N
Sbjct: 1606 PRAQVSDSATYTCHVANVAGTAEKSFHVDVYVPPMIEGN 1644
>gi|8923526 HRAS-like suppressor 2 [Homo sapiens]
Length = 162
Score = 30.8 bits (68), Expect = 1.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 143 HWAVYVGGGQIIHLHQGEIRQDSLYEAGAANV 174
HWA+YVG G ++HL + AGAA+V
Sbjct: 23 HWAIYVGDGYVVHLAPA----SEIAGAGAASV 50
>gi|29826341 calmodulin binding transcription activator 2 [Homo
sapiens]
Length = 1202
Score = 30.0 bits (66), Expect = 2.5
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 25/114 (21%)
Query: 30 RVGVAYFFSDDEEDLDERGQPDKFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAF 89
R G +F DD+ + +G + +PP P +P E
Sbjct: 437 RRGNCFFIQDDDSGEELKGHGAAPPIPSPPPSPPPSPAPL-------------EPSSRVG 483
Query: 90 RGQECIFSKVSGGPQGA-DLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAP 142
RG E +F GGP GA +L +++++ P DL+ L AP PAP P
Sbjct: 484 RG-EALF----GGPVGASELEPFSLSSFP------DLMGELISDEAPSIPAPTP 526
>gi|94536854 thrombospondin, type I, domain containing 4 [Homo
sapiens]
Length = 1018
Score = 29.6 bits (65), Expect = 3.3
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 25 EKDELRVGVAYFFSDDEEDLDERGQPDKFGVKAPPGCT-PCPESPSRHQHHLLHQLVLNE 83
EK++LR F+ + PD+F P P P+ P R + H QL E
Sbjct: 569 EKEDLRGEAPEMFTSESAQTFPVRHPDRFSPHRPDNLVPPAPQPPRRSRDHNWKQLGTTE 628
Query: 84 TQFSAFRGQE 93
+ +G +
Sbjct: 629 CSTTCGKGSQ 638
>gi|46249410 lecithin retinol acyltransferase [Homo sapiens]
Length = 230
Score = 29.6 bits (65), Expect = 3.3
Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 44/160 (27%)
Query: 95 IFSKVSGGPQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQII 154
+FS + G S Y ++ GD+LE+ P H+ +Y+G ++
Sbjct: 24 LFSSGAAGEDKGRNSFYETSSF----HRGDVLEV--------PRTHLTHYGIYLGDNRVA 71
Query: 155 HLHQ------------------------------GEIRQDSL--YEAGAANVGRVVNSWY 182
H+ IR D++ + GA + ++
Sbjct: 72 HMMPDILLALTDDMGRTQKVVSNKRLILGVIVKVASIRVDTVEDFAYGANILVNHLDESL 131
Query: 183 RYRPLVAELVVQNACGHLGLKSEEICWTNSESFAAWCRFG 222
+ + L+ E V + A LG + W N E F +CR+G
Sbjct: 132 QKKALLNEEVARRAEKLLGFTPYSLLWNNCEHFVTYCRYG 171
>gi|9966795 phospholipid scramblase 2 [Homo sapiens]
Length = 224
Score = 29.6 bits (65), Expect = 3.3
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 133 PAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNSWYRYRPLVAE-- 190
PAP PP P Y+ +I +HQ + L+ ++N+ + NS+ + AE
Sbjct: 2 PAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDT 61
Query: 191 -LVVQNACG 198
++N CG
Sbjct: 62 NFCIRNCCG 70
>gi|7662352 RUN and FYVE domain containing 3 isoform 2 [Homo
sapiens]
Length = 469
Score = 29.3 bits (64), Expect = 4.3
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 126 LELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNSWYRYR 185
L+ + L P PEP P++ + ++++ + I+ L E+ A N+GR ++S Y
Sbjct: 45 LDDISLTPDPEPTHEDPNYLMANERMNLMNMAKLSIK--GLIES-ALNLGRTLDS--DYA 99
Query: 186 PLVAELVVQNACGHLGLKSEEICWTNSESF 215
PL VV C GLK+++ ++SF
Sbjct: 100 PLQQFFVVMEHCLKHGLKAKKTFLGQNKSF 129
>gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 620
Score = 29.3 bits (64), Expect = 4.3
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 126 LELLWLQPAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNSWYRYR 185
L+ + L P PEP P++ + ++++ + I+ L E+ A N+GR ++S Y
Sbjct: 45 LDDISLTPDPEPTHEDPNYLMANERMNLMNMAKLSIK--GLIES-ALNLGRTLDS--DYA 99
Query: 186 PLVAELVVQNACGHLGLKSEEICWTNSESF 215
PL VV C GLK+++ ++SF
Sbjct: 100 PLQQFFVVMEHCLKHGLKAKKTFLGQNKSF 129
>gi|23110964 cathepsin W preproprotein [Homo sapiens]
Length = 376
Score = 29.3 bits (64), Expect = 4.3
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 103 PQGADLSVYAVTALPALCEPGDLLELLWLQPAPEPPAPAPHW 144
PQ D SV V E G E + Q P+PP P P+W
Sbjct: 286 PQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYW 327
>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
Length = 1024
Score = 29.3 bits (64), Expect = 4.3
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 94 CIFSKVSGGPQGADLSVYAVTALPALCEPGDLLELLWL--------QPAPEPPAPAP 142
C+F + + S ++ +L AL PG + P P+PPAPAP
Sbjct: 404 CVFEAILESHRAKGTSYTSLASLEALASPGPTQSPFFTFELPPQPPAPRPDPPAPAP 460
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 28.9 bits (63), Expect = 5.6
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 50 PDKFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQECIFSKVSGGPQGADLS 109
P + G + P G + P ++ L + + + + + S GP +S
Sbjct: 135 PGEVGKRTPDGASRSSHEPMEDAAPIVSPLASPDPRT---KHPQDLASTPPPGPMTTSVS 191
Query: 110 VYAVTALPALCEPGDLLELLWLQPAPEPPAPAPH 143
+ + P EP LLE +P+PEPPA PH
Sbjct: 192 SLSASQPP---EPSLLLE----RPSPEPPALFPH 218
>gi|37577159 calcium-sensing receptor [Homo sapiens]
Length = 1078
Score = 28.9 bits (63), Expect = 5.6
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 157 HQGEIRQDSLYEAGAANVGRVVNSWYRYRPLVAELVVQNACGHLGLKSEEICWTNSESFA 216
H E+ Q+S A V V +S PL+ E+V +N G + L SE W +S A
Sbjct: 254 HVVEVIQNS-----TAKVIVVFSSGPDLEPLIKEIVRRNITGKIWLASE--AWASSSLIA 306
Query: 217 AWCRFGKREFKAGGEVPAGTQPPQQQYYLKVH 248
F G + AG P +++ KVH
Sbjct: 307 MPQYFHVVGGTIGFALKAGQIPGFREFLKKVH 338
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 28.9 bits (63), Expect = 5.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 38 SDDEEDLDERGQPDKFGVKAPPGCTPCPESPSRHQHHLLHQLVLNETQFSAFRGQE 93
S++E + G+P G PPG CP+ S H + + V + + A++ +E
Sbjct: 3502 SEEESPVSPLGRPRPAGGPLPPGGDTCPQFCSSHSMPDVQEHVKDGPRAHAYKREE 3557
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,079,014
Number of Sequences: 37866
Number of extensions: 785398
Number of successful extensions: 2897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2868
Number of HSP's gapped (non-prelim): 52
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.