Guide to the Human Genome
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Name: FAM75A5 Sequence: fasta or formatted (1347aa) NCBI GI: 165377334
Description:

hypothetical protein LOC727905

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         84           2
 C cysteine            2.2         30           1
 D aspartate           2.9         39           2
 E glutamate           6.2         83           2
 F phenylalanine       3.1         42           3
 G glycine             5.4         73           2
 H histidine           3.7         50           4
 I isoleucine          2.2         30           2
 K lysine              5.2         70           3
 L leucine            10.5        142           3
 M methionine          2.0         27           1
 N asparagine          3.6         48           2
 P proline            10.6        143           3
 Q glutamine           7.0         94           2
 R arginine            5.6         75           4
 S serine             11.6        156           3
 T threonine           4.6         62           2
 V valine              5.1         69           2
 W tryptophan          1.6         22           1
 Y tyrosine            0.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC727905 
FAM75A7               0.997   hypothetical protein LOC26165 
FAM75A4               0.997   PREDICTED: family with sequence similarity 75, memb...
FAM75A3               0.991   hypothetical protein LOC727830 
FAM75A2               0.982   hypothetical protein LOC642265 
FAM75A1               0.981   hypothetical protein LOC647060 
FAM75A6               0.969   hypothetical protein LOC389730 
FAM75A4               0.940   PREDICTED: family with sequence similarity 75, memb...
FAM75C1               0.532   family with sequence similarity 75, member C1 [Homo...
C9orf79               0.187   chromosome 9 open reading frame 79 
FLJ46321              0.087   hypothetical protein LOC389763 
FLJ44082              0.078   hypothetical protein LOC389762 
FLJ43859              0.078   hypothetical protein LOC389761 
FAM75B                0.069   hypothetical protein LOC404770 
LOC729569             0.019   PREDICTED: hypothetical protein 
C9orf144B             0.015   hypothetical protein LOC259308 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
LOC100289470          0.013   PREDICTED: hypothetical protein XP_002342626 
MLL2                  0.013   myeloid/lymphoid or mixed-lineage leukemia 2 
DGKK                  0.012   diacylglycerol kinase kappa 
SRCAP                 0.011   Snf2-related CBP activator protein 
RBM33                 0.011   RNA binding motif protein 33 
LOC285679             0.010   hypothetical protein LOC285679 
PRR12                 0.009   proline rich 12 
MUC2                  0.009   mucin 2 precursor 
FLJ22184              0.009   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.009   PREDICTED: hypothetical protein LOC80164 
FMN1                  0.009   formin 1 
POU6F2                0.009   POU domain, class 6, transcription factor 2 
EP300                 0.009   E1A binding protein p300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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