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Search of human proteins with 215422401
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo
sapiens]
(600 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens] 1222 0.0
gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens] 1213 0.0
gi|23510352 MIF4G domain containing [Homo sapiens] 97 6e-20
gi|169212085 PREDICTED: similar to poly(A) binding protein inter... 75 1e-13
gi|239752553 PREDICTED: similar to poly(A) binding protein inter... 75 1e-13
gi|89041275 PREDICTED: similar to poly(A) binding protein intera... 75 1e-13
gi|34452730 poly(A) binding protein interacting protein 1 isofor... 75 2e-13
gi|33386693 poly(A) binding protein interacting protein 1 isofor... 75 2e-13
gi|17511255 poly(A) binding protein interacting protein 1 isofor... 75 2e-13
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 49 1e-05
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 49 1e-05
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 49 1e-05
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 49 1e-05
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 49 1e-05
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 44 6e-04
gi|110630018 eukaryotic translation initiation factor 4 gamma, 2... 39 0.010
gi|4503539 eukaryotic translation initiation factor 4 gamma, 2 i... 39 0.010
gi|59938776 cAMP responsive element binding protein 5 isoform de... 37 0.052
gi|59938774 cAMP responsive element binding protein 5 isoform be... 37 0.052
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 37 0.052
gi|59938770 cAMP responsive element binding protein 5 isoform al... 37 0.052
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 37 0.052
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.052
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 37 0.068
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 35 0.15
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.20
gi|55956923 5-hydroxytryptamine (serotonin) receptor 1A [Homo sa... 35 0.26
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 35 0.26
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 35 0.26
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 34 0.34
>gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens]
Length = 600
Score = 1222 bits (3163), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ
Sbjct: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
Query: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL
Sbjct: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
Query: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI
Sbjct: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
Query: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT
Sbjct: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
Query: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP
Sbjct: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
Query: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKVPD 360
DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKVPD
Sbjct: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKVPD 360
Query: 361 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY 420
EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY
Sbjct: 361 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY 420
Query: 421 QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI 480
QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI
Sbjct: 421 QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI 480
Query: 481 TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ 540
TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ
Sbjct: 481 TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ 540
Query: 541 LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 600
LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA
Sbjct: 541 LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 600
>gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]
Length = 598
Score = 1213 bits (3139), Expect = 0.0
Identities = 598/600 (99%), Positives = 598/600 (99%), Gaps = 2/600 (0%)
Query: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ
Sbjct: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
Query: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL
Sbjct: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
Query: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI
Sbjct: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
Query: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT
Sbjct: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
Query: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP
Sbjct: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
Query: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKVPD 360
DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEK D
Sbjct: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEK--D 358
Query: 361 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY 420
EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY
Sbjct: 359 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY 418
Query: 421 QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI 480
QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI
Sbjct: 419 QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI 478
Query: 481 TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ 540
TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ
Sbjct: 479 TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ 538
Query: 541 LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 600
LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA
Sbjct: 539 LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 598
>gi|23510352 MIF4G domain containing [Homo sapiens]
Length = 256
Score = 96.7 bits (239), Expect = 6e-20
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 412 LGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-----FRSLLLNMLQKDFTVRE 466
L ++ I ++ D F+ A ++C A+ E + FR LLN LQ+++ RE
Sbjct: 68 LEKVANVIVDHSLQDCVFSKEAGRMC--YAIIQAESKQAGQSVFRRGLLNRLQQEYQARE 125
Query: 467 ELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDV-KEDAVLC 525
+L+ + ++ W+ ++TF+C +F +R + P LV P+Y CL L Q + KE+ V C
Sbjct: 126 QLRARSLQGWVCYVTFICNIFDYLRVN-NMPMMALVNPVYDCLFRLAQPDSLSKEEEVDC 184
Query: 526 CSMELQSTGRLLEEQLPEMMTELLASARDKMLCPSE-SMLTRSLLLEVIELHANSWNPLT 584
++L G LE+ + M EL RD L P+ S L + LLLE+IE A W T
Sbjct: 185 LVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGWK-TT 243
Query: 585 PPITQYY 591
P +YY
Sbjct: 244 PAAHKYY 250
>gi|169212085 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 516
Score = 75.5 bits (184), Expect = 1e-13
Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGE----RPKITLLQSSKDRL 350
E P SP +P + P+Q+ +D I P++ E +P++ + + +L
Sbjct: 110 EVPASPQRPSPPGAL---PEQTRSLRAPPSSQDKI-PQQNSESAMAKPQVVVAPVLRSKL 165
Query: 351 RRRLKEKVPD----------EVAVET-TTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFM 399
E P EV E TP + D LN + +T++ F
Sbjct: 166 SVNAPEFYPSGYSSSYTESYEVGCEDYPTPSEYVQD----FLNHLTEQPGSFETEIEQFA 221
Query: 400 EEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV---EGTKFRSLLLN 456
E +++ L E+ IYQ+A S +F++ A+LC+ ++ + + FR LLL
Sbjct: 222 ETLNGCVTTDDALQELAELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQ 281
Query: 457 MLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM--RSSTGEPFRVLVCPIYTCLRE 511
+ ++ V+++ + D +R+ F+ FL E++ + + + G+ R + + LRE
Sbjct: 282 RCRTEYEVKDQAAKGDEVTRKRFHAFVFFLGELYLNLEIKGTNGQVTRADI--LQVGLRE 339
Query: 512 LLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM----MTELLASARDKMLCPSESMLT 565
LL + + +D ++C L+ TG +LE+ E M E++ + +L + S
Sbjct: 340 LLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDV 399
Query: 566 RSLLLEVIELHANSW 580
+ +LL+++EL +++W
Sbjct: 400 KQMLLKLVELRSSNW 414
>gi|239752553 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 457
Score = 75.5 bits (184), Expect = 1e-13
Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGE----RPKITLLQSSKDRL 350
E P SP +P + P+Q+ +D I P++ E +P++ + + +L
Sbjct: 51 EVPASPQRPSPPGAL---PEQTRSLRAPPSSQDKI-PQQNSESAMAKPQVVVAPVLRSKL 106
Query: 351 RRRLKEKVPD----------EVAVET-TTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFM 399
E P EV E TP + D LN + +T++ F
Sbjct: 107 SVNAPEFYPSGYSSSYTESYEVGCEDYPTPSEYVQD----FLNHLTEQPGSFETEIEQFA 162
Query: 400 EEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV---EGTKFRSLLLN 456
E +++ L E+ IYQ+A S +F++ A+LC+ ++ + + FR LLL
Sbjct: 163 ETLNGCVTTDDALQELAELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQ 222
Query: 457 MLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM--RSSTGEPFRVLVCPIYTCLRE 511
+ ++ V+++ + D +R+ F+ FL E++ + + + G+ R + + LRE
Sbjct: 223 RCRTEYEVKDQAAKGDEVTRKRFHAFVFFLGELYLNLEIKGTNGQVTRADI--LQVGLRE 280
Query: 512 LLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM----MTELLASARDKMLCPSESMLT 565
LL + + +D ++C L+ TG +LE+ E M E++ + +L + S
Sbjct: 281 LLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDV 340
Query: 566 RSLLLEVIELHANSW 580
+ +LL+++EL +++W
Sbjct: 341 KQMLLKLVELRSSNW 355
>gi|89041275 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 488
Score = 75.5 bits (184), Expect = 1e-13
Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGE----RPKITLLQSSKDRL 350
E P SP +P + P+Q+ +D I P++ E +P++ + + +L
Sbjct: 82 EVPASPQRPSPPGAL---PEQTRSLRAPPSSQDKI-PQQNSESAMAKPQVVVAPVLRSKL 137
Query: 351 RRRLKEKVPD----------EVAVET-TTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFM 399
E P EV E TP + D LN + +T++ F
Sbjct: 138 SVNAPEFYPSGYSSSYTESYEVGCEDYPTPSEYVQD----FLNHLTEQPGSFETEIEQFA 193
Query: 400 EEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV---EGTKFRSLLLN 456
E +++ L E+ IYQ+A S +F++ A+LC+ ++ + + FR LLL
Sbjct: 194 ETLNGCVTTDDALQELAELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQ 253
Query: 457 MLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM--RSSTGEPFRVLVCPIYTCLRE 511
+ ++ V+++ + D +R+ F+ FL E++ + + + G+ R + + LRE
Sbjct: 254 RCRTEYEVKDQAAKGDEVTRKRFHAFVFFLGELYLNLEIKGTNGQVTRADI--LQVGLRE 311
Query: 512 LLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM----MTELLASARDKMLCPSESMLT 565
LL + + +D ++C L+ TG +LE+ E M E++ + +L + S
Sbjct: 312 LLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDV 371
Query: 566 RSLLLEVIELHANSW 580
+ +LL+++EL +++W
Sbjct: 372 KQMLLKLVELRSSNW 386
>gi|34452730 poly(A) binding protein interacting protein 1 isoform 3
[Homo sapiens]
Length = 367
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 379 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 438
+ LN + +T++ F E +++ L E+V IYQ+A S +F++ A+LC+
Sbjct: 52 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 111
Query: 439 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 490
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 112 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 171
Query: 491 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 544
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 172 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 229
Query: 545 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 580
M E++ + +L + S + +LL+++EL +++W
Sbjct: 230 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 265
>gi|33386693 poly(A) binding protein interacting protein 1 isoform 2
[Homo sapiens]
Length = 400
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 379 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 438
+ LN + +T++ F E +++ L E+V IYQ+A S +F++ A+LC+
Sbjct: 85 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 144
Query: 439 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 490
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 145 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 204
Query: 491 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 544
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 205 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 262
Query: 545 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 580
M E++ + +L + S + +LL+++EL +++W
Sbjct: 263 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 298
>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
[Homo sapiens]
Length = 479
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 379 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 438
+ LN + +T++ F E +++ L E+V IYQ+A S +F++ A+LC+
Sbjct: 164 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 223
Query: 439 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 490
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 224 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 283
Query: 491 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 544
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 284 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 341
Query: 545 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 580
M E++ + +L + S + +LL+++EL +++W
Sbjct: 342 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 377
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 49.3 bits (116), Expect = 1e-05
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 66/328 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 691 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 741
Query: 354 LKEKVPDEVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLG 413
+K E + + Q + ++ ILN + K T Q + ++EE L
Sbjct: 742 AADKDRGEEDADGSKTQ-DLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLK 795
Query: 414 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF---- 462
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 796 GVIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDK 855
Query: 463 -----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGE 496
++EEL++ +D+ R LG I F+ E+F
Sbjct: 856 DDDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF--------- 906
Query: 497 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 555
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 907 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 964
Query: 556 MLCPSE-SMLTRSLLLEVIELHANSWNP 582
++ + S R +L +V++L ++W P
Sbjct: 965 IIKEKKTSSRIRFMLQDVLDLRGSNWVP 992
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 49.3 bits (116), Expect = 1e-05
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 66/328 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 604 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 654
Query: 354 LKEKVPDEVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLG 413
+K E + + Q + ++ ILN + K T Q + ++EE L
Sbjct: 655 AADKDRGEEDADGSKTQ-DLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLK 708
Query: 414 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF---- 462
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 709 GVIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDK 768
Query: 463 -----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGE 496
++EEL++ +D+ R LG I F+ E+F
Sbjct: 769 DDDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF--------- 819
Query: 497 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 555
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 820 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 877
Query: 556 MLCPSE-SMLTRSLLLEVIELHANSWNP 582
++ + S R +L +V++L ++W P
Sbjct: 878 IIKEKKTSSRIRFMLQDVLDLRGSNWVP 905
>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
isoform 3 [Homo sapiens]
Length = 1435
Score = 49.3 bits (116), Expect = 1e-05
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 66/328 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 527 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 577
Query: 354 LKEKVPDEVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLG 413
+K E + + Q + ++ ILN + K T Q + ++EE L
Sbjct: 578 AADKDRGEEDADGSKTQ-DLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLK 631
Query: 414 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF---- 462
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 632 GVIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDK 691
Query: 463 -----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGE 496
++EEL++ +D+ R LG I F+ E+F
Sbjct: 692 DDDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF--------- 742
Query: 497 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 555
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 743 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 800
Query: 556 MLCPSE-SMLTRSLLLEVIELHANSWNP 582
++ + S R +L +V++L ++W P
Sbjct: 801 IIKEKKTSSRIRFMLQDVLDLRGSNWVP 828
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 49.3 bits (116), Expect = 1e-05
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 66/328 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 691 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 741
Query: 354 LKEKVPDEVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLG 413
+K E + + Q + ++ ILN + K T Q + ++EE L
Sbjct: 742 AADKDRGEEDADGSKTQ-DLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLK 795
Query: 414 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF---- 462
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 796 GVIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDK 855
Query: 463 -----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGE 496
++EEL++ +D+ R LG I F+ E+F
Sbjct: 856 DDDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF--------- 906
Query: 497 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 555
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 907 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 964
Query: 556 MLCPSE-SMLTRSLLLEVIELHANSWNP 582
++ + S R +L +V++L ++W P
Sbjct: 965 IIKEKKTSSRIRFMLQDVLDLRGSNWVP 992
>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
isoform 4 [Homo sapiens]
Length = 1403
Score = 49.3 bits (116), Expect = 1e-05
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 66/328 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 495 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 545
Query: 354 LKEKVPDEVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLG 413
+K E + + Q + ++ ILN + K T Q + ++EE L
Sbjct: 546 AADKDRGEEDADGSKTQ-DLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLK 599
Query: 414 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF---- 462
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 600 GVIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDK 659
Query: 463 -----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGE 496
++EEL++ +D+ R LG I F+ E+F
Sbjct: 660 DDDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF--------- 710
Query: 497 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 555
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 711 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 768
Query: 556 MLCPSE-SMLTRSLLLEVIELHANSWNP 582
++ + S R +L +V++L ++W P
Sbjct: 769 IIKEKKTSSRIRFMLQDVLDLRGSNWVP 796
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 43.5 bits (101), Expect = 6e-04
Identities = 70/326 (21%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 297 PRSPDTLAPVAS-ERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLK 355
PR PD A R P G P + + S +R R IT+ L++
Sbjct: 672 PRGPDFTPAFADFGRQTPGGRGVPLLNVGSRRSQPGQRREPRKIITVSVKEDVHLKKAEN 731
Query: 356 EKVPDEVA-VETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNST-NSEEMLG 413
P + + P+ K +L + S+ N + M++ T ++EE L
Sbjct: 732 AWKPSQKRDSQADDPENIKTQELFRKVRSILNKLTP--QMFNQLMKQVSGLTVDTEERLK 789
Query: 414 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV-------EGTKFRSLLLNMLQKDFTVRE 466
++ +++KA+ + SF+ A +C + V FR LLLN QK+F +
Sbjct: 790 GVIDLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNTVNFRKLLLNRCQKEFEKDK 849
Query: 467 ------ELQQQDVE------------------------RWLGFITFLCEVFGTMRSSTGE 496
E +Q+++E R +G I F+ E+F
Sbjct: 850 ADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELF--------- 900
Query: 497 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 555
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 901 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 958
Query: 556 MLCPSE-SMLTRSLLLEVIELHANSW 580
++ + S R +L +VI+L +W
Sbjct: 959 IVKERKTSSRIRFMLQDVIDLRLCNW 984
>gi|110630018 eukaryotic translation initiation factor 4 gamma, 2
isoform 2 [Homo sapiens]
Length = 869
Score = 39.3 bits (90), Expect = 0.010
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 46/213 (21%)
Query: 408 SEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALF--------------MVEGTKFRSL 453
S+ +L ++ I KA+ + ++ A+LC ++A + T FR L
Sbjct: 107 SKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRL 166
Query: 454 LLNMLQKDFTVR----------------EELQQQDVER--WLGFITFLCEVFGTMRSSTG 495
L++ LQ +F R EE +Q+ + + LG I F+ E+ G
Sbjct: 167 LISKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGEL--------G 218
Query: 496 EPFRVLVCPIYTCLRELL------QSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELL 549
+ + ++ C++ LL Q +D+ ED C + RL E+ +M +
Sbjct: 219 KLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYF 278
Query: 550 ASARDKMLCPSESMLTRSLLLEVIELHANSWNP 582
A ML R LL + +EL + W P
Sbjct: 279 ARMCSLMLSKELPARIRFLLQDTVELREHHWVP 311
>gi|4503539 eukaryotic translation initiation factor 4 gamma, 2
isoform 1 [Homo sapiens]
Length = 907
Score = 39.3 bits (90), Expect = 0.010
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 46/213 (21%)
Query: 408 SEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALF--------------MVEGTKFRSL 453
S+ +L ++ I KA+ + ++ A+LC ++A + T FR L
Sbjct: 107 SKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRL 166
Query: 454 LLNMLQKDFTVR----------------EELQQQDVER--WLGFITFLCEVFGTMRSSTG 495
L++ LQ +F R EE +Q+ + + LG I F+ E+ G
Sbjct: 167 LISKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGEL--------G 218
Query: 496 EPFRVLVCPIYTCLRELL------QSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELL 549
+ + ++ C++ LL Q +D+ ED C + RL E+ +M +
Sbjct: 219 KLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYF 278
Query: 550 ASARDKMLCPSESMLTRSLLLEVIELHANSWNP 582
A ML R LL + +EL + W P
Sbjct: 279 ARMCSLMLSKELPARIRFLLQDTVELREHHWVP 311
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 37.0 bits (84), Expect = 0.052
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 30/216 (13%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 124 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 176
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 177 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 225
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKV-------PDEVAVETTTPQQNKM 374
R+ ++ E ER + L ++ R R K KV E +T QN++
Sbjct: 226 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 282
Query: 375 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 409
L E+ + + D +T +E+Q + E
Sbjct: 283 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 318
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 37.0 bits (84), Expect = 0.052
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 30/216 (13%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 256 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 308
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 309 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 357
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKV-------PDEVAVETTTPQQNKM 374
R+ ++ E ER + L ++ R R K KV E +T QN++
Sbjct: 358 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 414
Query: 375 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 409
L E+ + + D +T +E+Q + E
Sbjct: 415 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 450
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 37.0 bits (84), Expect = 0.052
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 30/216 (13%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 230 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 282
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 283 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 331
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKV-------PDEVAVETTTPQQNKM 374
R+ ++ E ER + L ++ R R K KV E +T QN++
Sbjct: 332 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 388
Query: 375 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 409
L E+ + + D +T +E+Q + E
Sbjct: 389 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 424
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 37.0 bits (84), Expect = 0.052
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 30/216 (13%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 263 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 315
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 316 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 364
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKV-------PDEVAVETTTPQQNKM 374
R+ ++ E ER + L ++ R R K KV E +T QN++
Sbjct: 365 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 421
Query: 375 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 409
L E+ + + D +T +E+Q + E
Sbjct: 422 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 457
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 37.0 bits (84), Expect = 0.052
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 202 GGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRP--THHGYSQNRRWHHGNMKHPP 259
G N +HG + GS+KH S + + H SG P T H ++ + + P
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 260 GDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERLPPQQSGGP 319
G+ + E + E P E +G+ G + P Q SG P
Sbjct: 121 GE--HLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAP 178
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.0 bits (84), Expect = 0.052
Identities = 41/164 (25%), Positives = 59/164 (35%), Gaps = 32/164 (19%)
Query: 177 EVEIAHTKKLFRRRRNDRRR-QQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHP 235
E E T+ R R R R + R P +P+ + +R +SY P P
Sbjct: 268 EKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPR----------RRHRSRSRSYSPRRRPSP 317
Query: 236 SGRPTHHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLE 295
RP S RR M PP HR ++ + +G + SS
Sbjct: 318 RRRP-----SPRRRTPPRRMPPPP-------RHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 296 APRSPDTLAPVASERLPPQQSGGPEVETKR-KDSILPERIGERP 338
RSP + PP+++ P +T+R S P R RP
Sbjct: 366 RSRSP--------PKKPPKRTSSPPRKTRRLSPSASPPRRRHRP 401
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo
sapiens]
Length = 1343
Score = 36.6 bits (83), Expect = 0.068
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 200 PPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHP 258
PPGG+ G H P S+ H+ H ++GG P + P HGYS++ G K P
Sbjct: 941 PPGGHGGG--GGHGPPSSHHHHHHHHHHRGGEPPGDTFAP-FHGYSKSEDLSSGVPKPP 996
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 188 RRRRNDRRRQQRP---PGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGY 244
R R ++R+ Q+P P G Q+ G SA R + + +AP P+ R G+
Sbjct: 204 RGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSR----GH 259
Query: 245 SQNRRWHHGNMKHPPGDKGE 264
+R + P G G+
Sbjct: 260 RTEKRKPQQPQRRPAGGTGQ 279
Score = 33.9 bits (76), Expect = 0.44
Identities = 31/128 (24%), Positives = 43/128 (33%), Gaps = 9/128 (7%)
Query: 142 REGCGKGKLEDGDGINLNDIEKVL-PAWQGYHPMPHEVEIAH----TKKLFRRRRNDRRR 196
R G G D G + E PA E E A T R + R +
Sbjct: 50 RRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQ 109
Query: 197 QQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMK 256
Q P G Q+ G SA R + + +AP P+ R G+ +R +
Sbjct: 110 LQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSR----GHRTEKRKRQQPQR 165
Query: 257 HPPGDKGE 264
P G G+
Sbjct: 166 RPAGGTGQ 173
Score = 33.9 bits (76), Expect = 0.44
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 183 TKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHH 242
T + R + R++ QR P G Q+ G SA + + +AP P+ R
Sbjct: 149 TSRGHRTEKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR---- 204
Query: 243 GYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDT 302
G+ +R P G G+ R ++ + + + + +D + + R T
Sbjct: 205 GHRTEKRKPQQPQCRPAGGTGQ---RRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRT 261
Query: 303 LAPVASERLPPQQ 315
E+ PQQ
Sbjct: 262 ------EKRKPQQ 268
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 35.0 bits (79), Expect = 0.20
Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 32/213 (15%)
Query: 188 RRRRNDRRRQQRPPGGNKPQQHG--DHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYS 245
R R + ++ +P KP H D++ + RD K+ G P G PT
Sbjct: 1289 REERPENKKPVKPHSSFKPDNHVRIDNRLLEKPYVRDDDKAKPGFL---PKGEPT----- 1340
Query: 246 QNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSL------EAPRS 299
RR G + D G + + T+ P D + S + E PR
Sbjct: 1341 --RRGRGGTFRRGGRDPGGRPSRPS-----TLRRPAYRDNQWNPRQSEVPKPEDGEPPRR 1393
Query: 300 PDTLAPVASERLPP--QQSGGPEVE-TKRKDSILPERIGERPKITLLQSSKDRLRRRLKE 356
+ P+A+++ PP ++ P E +R+ P R + P+ L+ R
Sbjct: 1394 HEQFIPIAADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLR------EREAAS 1447
Query: 357 KVPDEVAVETTTPQQNKMDKLIEILNSMRNNSS 389
K + VAV T N + + L + N +
Sbjct: 1448 KSNEVVAVPTNGTVNNVAQEPVNTLGDISGNKT 1480
>gi|55956923 5-hydroxytryptamine (serotonin) receptor 1A [Homo
sapiens]
Length = 422
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 230 GSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDT 289
G++P P + + +G S +R W G G GA R + +E ++
Sbjct: 243 GASPAPQPKKSVNGESGSRNWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSK 302
Query: 290 GHSSLEAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPER 333
H L + P AP + ER + + E KRK ++ ER
Sbjct: 303 EHLPLPSEAGPTPCAPASFERKNERNA-----EAKRKMALARER 341
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 34.7 bits (78), Expect = 0.26
Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 12/178 (6%)
Query: 198 QRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKH 257
QRP G K H + Q ++ ++ P+ SG + + K
Sbjct: 48 QRPGGSTK--SHPEPQTPKDSPSKSSAEAQTPEDTPNKSGAEAKTQKDSSNK-SGAEAKT 104
Query: 258 PPGDKGEAGAH-RNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTL----APVASERLP 312
G ++G+ + K++ + +P+L+ TG S EA D+ A +++
Sbjct: 105 QKGSTSKSGSEAQTTKDSTSKSHPELQTPKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDS 164
Query: 313 PQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKVPDEVAVETTTPQ 370
P +SG TK +P + G + SSK + + VP++ E TP+
Sbjct: 165 PSKSGSEAQTTKD----VPNKSGADGQTPKDGSSKSGAEDQTPKDVPNKSGAEKQTPK 218
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 202 GGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRP--THHGYSQNRRWHHGNMKHPP 259
G N +HG + GS+KH S + + H SG P T H ++ + + P
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 260 GDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAP 297
G+ + E + E P E +G+ H S E P
Sbjct: 121 GE--HLSGEQPLSELESGEQPSDEQPSGE--HGSGEQP 154
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 34.3 bits (77), Expect = 0.34
Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 6/188 (3%)
Query: 175 PHEVEIAHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPH 234
P E + ++ R + DR Q R P++ D + + +R + +GG
Sbjct: 1192 PRESRPSEEREWDREKERDRDNQDREENDKDPERERDRERDVDREDRFRRPRDEGGWRRG 1251
Query: 235 PSGRPTHHGYSQNRRWH-HGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSS 293
P+ + S R + + D+ + R+ ++ P L +
Sbjct: 1252 PAEESSSWRDSSRRDDRDRDDRRRERDDRRDLRERRDLRDDRDRRGPPLRSEREEVSSWR 1311
Query: 294 LEAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRR 353
R D + ER PP++ P + R+ ER GE+ K + ++ KDR R
Sbjct: 1312 RADDRKDDRV----EERDPPRRVPPPALSRDRERDRDREREGEKEKAS-WRAEKDRESLR 1366
Query: 354 LKEKVPDE 361
+ DE
Sbjct: 1367 RTKNETDE 1374
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,666,645
Number of Sequences: 37866
Number of extensions: 1341079
Number of successful extensions: 4274
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 4069
Number of HSP's gapped (non-prelim): 323
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.