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Search of human proteins with 21536476
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21536476 diphthamide biosynthesis protein 2 isoform a [Homo
sapiens]
(489 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21536476 diphthamide biosynthesis protein 2 isoform a [Homo s... 988 0.0
gi|88853059 diphthamide biosynthesis protein 2 isoform b [Homo s... 325 7e-89
gi|116686106 diptheria toxin resistance protein required for dip... 101 1e-21
gi|148762978 similar to CG15216-PA [Homo sapiens] 47 3e-05
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 37 0.053
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 37 0.053
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 37 0.053
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 37 0.053
gi|239757093 PREDICTED: hypothetical protein [Homo sapiens] 36 0.091
gi|239751599 PREDICTED: hypothetical protein XP_002347926 [Homo ... 36 0.091
gi|239746114 PREDICTED: hypothetical protein XP_002344193 [Homo ... 36 0.091
gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 35 0.12
gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 35 0.12
gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 35 0.12
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.12
gi|118402590 myosin XV [Homo sapiens] 35 0.20
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 34 0.34
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 34 0.34
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 34 0.34
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 34 0.34
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 34 0.34
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 34 0.34
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 34 0.34
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 34 0.34
gi|126517478 peroxidasin homolog-like [Homo sapiens] 33 0.45
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 33 0.45
gi|239749959 PREDICTED: hypothetical protein [Homo sapiens] 33 0.77
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 32 1.0
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 32 1.3
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 32 1.3
>gi|21536476 diphthamide biosynthesis protein 2 isoform a [Homo
sapiens]
Length = 489
Score = 988 bits (2553), Expect = 0.0
Identities = 489/489 (100%), Positives = 489/489 (100%)
Query: 1 MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLG 60
MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLG
Sbjct: 1 MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLG 60
Query: 61 DAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPV 120
DAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPV
Sbjct: 61 DAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPV 120
Query: 121 AFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHALEALATLLRPRYLDLLVSSP 180
AFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHALEALATLLRPRYLDLLVSSP
Sbjct: 121 AFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHALEALATLLRPRYLDLLVSSP 180
Query: 181 AFPQPVGSLSPEPMPLERFGRRFPLAPGRRLEEYGAFYVGGSKASPDPDLDPDLSRLLLG 240
AFPQPVGSLSPEPMPLERFGRRFPLAPGRRLEEYGAFYVGGSKASPDPDLDPDLSRLLLG
Sbjct: 181 AFPQPVGSLSPEPMPLERFGRRFPLAPGRRLEEYGAFYVGGSKASPDPDLDPDLSRLLLG 240
Query: 241 WAPGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVAQHREAL 300
WAPGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVAQHREAL
Sbjct: 241 WAPGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGLLAGTLGVAQHREAL 300
Query: 301 AHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILA 360
AHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILA
Sbjct: 301 AHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILA 360
Query: 361 PCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPP 420
PCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPP
Sbjct: 361 PCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPP 420
Query: 421 PAWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVTEAVSGRRGIA 480
PAWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVTEAVSGRRGIA
Sbjct: 421 PAWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPRLGQTPVTEAVSGRRGIA 480
Query: 481 IAYEDEGSG 489
IAYEDEGSG
Sbjct: 481 IAYEDEGSG 489
>gi|88853059 diphthamide biosynthesis protein 2 isoform b [Homo
sapiens]
Length = 261
Score = 325 bits (832), Expect = 7e-89
Identities = 168/193 (87%), Positives = 171/193 (88%)
Query: 1 MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLG 60
MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLG
Sbjct: 1 MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRDLGCERVALQFPDQLLG 60
Query: 61 DAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPV 120
DAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPV
Sbjct: 61 DAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPV 120
Query: 121 AFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHALEALATLLRPRYLDLLVSSP 180
AFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHAL + + P L +P
Sbjct: 121 AFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHALGSPFHVALPPPESELWETP 180
Query: 181 AFPQPVGSLSPEP 193
G L P P
Sbjct: 181 DVSLITGDLRPPP 193
Score = 207 bits (527), Expect = 2e-53
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 390 GSPFHVALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAA 449
GSPFHVALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAA
Sbjct: 162 GSPFHVALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAA 221
Query: 450 SFLSSRSWQGLEPRLGQTPVTEAVSGRRGIAIAYEDEGSG 489
SFLSSRSWQGLEPRLGQTPVTEAVSGRRGIAIAYEDEGSG
Sbjct: 222 SFLSSRSWQGLEPRLGQTPVTEAVSGRRGIAIAYEDEGSG 261
>gi|116686106 diptheria toxin resistance protein required for
diphthamide biosynthesis-like 1 [Homo sapiens]
Length = 443
Score = 101 bits (252), Expect = 1e-21
Identities = 97/356 (27%), Positives = 149/356 (41%), Gaps = 48/356 (13%)
Query: 33 YELERVAGFVRDLGCERVALQFPDQLLGDAVAVAARLEETTGSKMFILGDTAYGSCCVDV 92
+E+ + ++ ++VALQ P+ LL A + LE T +++ ++GD YG+CCVD
Sbjct: 60 FEIPKTIWRIQQAQAKKVALQMPEGLLLFACTIVDILERFTEAEVMVMGDVTYGACCVDD 119
Query: 93 LGAEQAGAQALIHFGPACLSP---PARPLPVAFVLRQRSVALELCVKAFEAQNPDPKAPV 149
A GA L+H+G +CL P A+ V +V + + + P P +
Sbjct: 120 FTARALGADFLVHYGHSCLIPMDTSAQDFRVLYVFVDIRIDTTHLLDSLRLTFP-PATAL 178
Query: 150 VLLSEPACAHALEALATLLRPRYLDLLVSSPAFPQPVGSLSPEPMPLERFGRRFPLAPGR 209
L+S L+A A L+ Y VS P PL+PG
Sbjct: 179 ALVSTIQFVSTLQAAAQELKAEY---RVSVPQCK--------------------PLSPGE 215
Query: 210 RL---------EEYGAFYVGGSKASPDPDLDPDLSRLLLGWAPGQPFSSCCPDTGKTQDE 260
L E Y+G + L +++ P P P + E
Sbjct: 216 ILGCTSPRLSKEVEAVVYLGDGRF--------HLESVMIA-NPNVPAYRYDPYSKVLSRE 266
Query: 261 GARAGRLRARRRYLVERARDARVVGLLAGTLGVAQHREALAHLRNLTQAAGKRSYVLALG 320
R++A R+ + AR A+ GL+ GTLG + L HL + +A G L L
Sbjct: 267 HYDHQRMQAARQEAIATARSAKSWGLILGTLGRQGSPKILEHLESRLRALGLSFVRLLLS 326
Query: 321 RPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNP-AWPPP 375
P+KL+ PEVDV+V +ACP L+ +F +P+L P E A +W P
Sbjct: 327 EIFPSKLSLLPEVDVWVQVACP--RLSIDWGTAFPKPLLTPYEAAVALRDISWQQP 380
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 47.4 bits (111), Expect = 3e-05
Identities = 89/335 (26%), Positives = 121/335 (36%), Gaps = 87/335 (25%)
Query: 149 VVLLSEPACAHALEALATLLRPRYLDLLVSSPAFPQPVGSLSPEPMPLERFGRRFPLAPG 208
+V+ S P A E A L P+ LL S PA P P P APG
Sbjct: 587 LVIDSRPTAGQASEPAADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPG 646
Query: 209 RRLEEYGAFYVGGSKASPDPDLDPD---------LSRLLLGWAPGQPFSSC-------CP 252
+ ASP+P D D R + F SC C
Sbjct: 647 EAAD-----------ASPEPSADEDDLMTCSNARCRRTETMFNACLYFKSCHSCYTYYCS 695
Query: 253 DTGKTQDEGARA-----GRLRARRRYLVERARDARVVGLLAGTLGVAQHR--EALAHLRN 305
+ +D A GR+ + R++++ RD+ V HR +A +
Sbjct: 696 RLCRREDWDAHKARCVYGRVGSVCRHVLQFCRDSGPV-----------HRAFSRIARVGF 744
Query: 306 LTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLL--------------ACPLGALAPQLS 351
L++ G VL LG P+P NF + LL A PLG+ A +L+
Sbjct: 745 LSRGRG----VLFLGFPSPGSADNFLRFGLEGLLLSPTYLSLRELATHAAPLGSYARELA 800
Query: 352 --GSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESE-----L 404
G ++P A C L + P G AP PG+P ALP P +
Sbjct: 801 AAGRLYEP--AECFLLSVSVAVGP--GTAP---------PGTP---ALPAPAPRSHGPTV 844
Query: 405 WETPDVSLITGD-LRPPPAWKSSNDHGSLALTPRP 438
+ V+L G RPPPA D +L LTP P
Sbjct: 845 RKFAKVALAAGSPARPPPARSREPDMETLILTPPP 879
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.053
Identities = 54/204 (26%), Positives = 69/204 (33%), Gaps = 29/204 (14%)
Query: 243 PGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGL--------LAGTLGVA 294
P +P ++ + + R R + R + ER R R G LAG +
Sbjct: 504 PRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSD 563
Query: 295 QHREALAHLRNLTQAAGKR--SYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSG 352
R L + + A S PTP P +A P G PQ +G
Sbjct: 564 NDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGP-QPQSAG 622
Query: 353 SFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSL 412
S P+ PA PPPG APH T P P V PP + T L
Sbjct: 623 STSGPVP---------QPACPPPGPAPHPTG-----PPGPIPVPAPPQIA----TSTSLL 664
Query: 413 ITGDLRPPPAWKSSNDHGSLALTP 436
L PPP S+ G L P
Sbjct: 665 AAQSLVPPPGLPGSSTPGVLPYFP 688
Score = 32.7 bits (73), Expect = 0.77
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 340 ACPLGALAPQLSGSFFQ-PILAPCELEA-----ACNPAWPPPGL----APHLTHYADLLP 389
ACP AP +G P+ AP ++ A PPPGL P + Y P
Sbjct: 632 ACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFP--P 689
Query: 390 GSPFHVALPPPESELWETPDVSLITGDL 417
G P A P+S + E+PDV+L+T L
Sbjct: 690 GLPPPDAGGAPQSSMSESPDVNLVTQQL 717
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.053
Identities = 54/204 (26%), Positives = 69/204 (33%), Gaps = 29/204 (14%)
Query: 243 PGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGL--------LAGTLGVA 294
P +P ++ + + R R + R + ER R R G LAG +
Sbjct: 504 PRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSD 563
Query: 295 QHREALAHLRNLTQAAGKR--SYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSG 352
R L + + A S PTP P +A P G PQ +G
Sbjct: 564 NDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGP-QPQSAG 622
Query: 353 SFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSL 412
S P+ PA PPPG APH T P P V PP + T L
Sbjct: 623 STSGPVP---------QPACPPPGPAPHPTG-----PPGPIPVPAPPQIA----TSTSLL 664
Query: 413 ITGDLRPPPAWKSSNDHGSLALTP 436
L PPP S+ G L P
Sbjct: 665 AAQSLVPPPGLPGSSTPGVLPYFP 688
Score = 32.7 bits (73), Expect = 0.77
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 340 ACPLGALAPQLSGSFFQ-PILAPCELEA-----ACNPAWPPPGL----APHLTHYADLLP 389
ACP AP +G P+ AP ++ A PPPGL P + Y P
Sbjct: 632 ACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFP--P 689
Query: 390 GSPFHVALPPPESELWETPDVSLITGDL 417
G P A P+S + E+PDV+L+T L
Sbjct: 690 GLPPPDAGGAPQSSMSESPDVNLVTQQL 717
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.053
Identities = 54/204 (26%), Positives = 69/204 (33%), Gaps = 29/204 (14%)
Query: 243 PGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGL--------LAGTLGVA 294
P +P ++ + + R R + R + ER R R G LAG +
Sbjct: 504 PRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSD 563
Query: 295 QHREALAHLRNLTQAAGKR--SYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSG 352
R L + + A S PTP P +A P G PQ +G
Sbjct: 564 NDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGP-QPQSAG 622
Query: 353 SFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSL 412
S P+ PA PPPG APH T P P V PP + T L
Sbjct: 623 STSGPVP---------QPACPPPGPAPHPTG-----PPGPIPVPAPPQIA----TSTSLL 664
Query: 413 ITGDLRPPPAWKSSNDHGSLALTP 436
L PPP S+ G L P
Sbjct: 665 AAQSLVPPPGLPGSSTPGVLPYFP 688
Score = 32.7 bits (73), Expect = 0.77
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 340 ACPLGALAPQLSGSFFQ-PILAPCELEA-----ACNPAWPPPGL----APHLTHYADLLP 389
ACP AP +G P+ AP ++ A PPPGL P + Y P
Sbjct: 632 ACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFP--P 689
Query: 390 GSPFHVALPPPESELWETPDVSLITGDL 417
G P A P+S + E+PDV+L+T L
Sbjct: 690 GLPPPDAGGAPQSSMSESPDVNLVTQQL 717
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 36.6 bits (83), Expect = 0.053
Identities = 54/204 (26%), Positives = 69/204 (33%), Gaps = 29/204 (14%)
Query: 243 PGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVERARDARVVGL--------LAGTLGVA 294
P +P ++ + + R R + R + ER R R G LAG +
Sbjct: 365 PRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSD 424
Query: 295 QHREALAHLRNLTQAAGKR--SYVLALGRPTPAKLANFPEVDVFVLLACPLGALAPQLSG 352
R L + + A S PTP P +A P G PQ +G
Sbjct: 425 NDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGP-QPQSAG 483
Query: 353 SFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSL 412
S P+ PA PPPG APH T P P V PP + T L
Sbjct: 484 STSGPVP---------QPACPPPGPAPHPTG-----PPGPIPVPAPPQIA----TSTSLL 525
Query: 413 ITGDLRPPPAWKSSNDHGSLALTP 436
L PPP S+ G L P
Sbjct: 526 AAQSLVPPPGLPGSSTPGVLPYFP 549
Score = 32.7 bits (73), Expect = 0.77
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 340 ACPLGALAPQLSGSFFQ-PILAPCELEA-----ACNPAWPPPGL----APHLTHYADLLP 389
ACP AP +G P+ AP ++ A PPPGL P + Y P
Sbjct: 493 ACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFP--P 550
Query: 390 GSPFHVALPPPESELWETPDVSLITGDL 417
G P A P+S + E+PDV+L+T L
Sbjct: 551 GLPPPDAGGAPQSSMSESPDVNLVTQQL 578
>gi|239757093 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 35.8 bits (81), Expect = 0.091
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 337 VLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVA 396
V L C L A S S P P E ++ PP P H ++PGS FHV+
Sbjct: 60 VQLPCCLTIAATTESPS---PPPLPTEKQSHRVAGSPPEVAGPAGRHR--VMPGSCFHVS 114
Query: 397 LPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESS-PAASFLSSR 455
++ L TP S + G P AW S G P P ELA ++ P S S
Sbjct: 115 CSKHQALLGNTPSASGLGGTC-PASAWPSVRVKGP---NPGPLEELARTAFPTHSETSET 170
Query: 456 SWQGLEPRLGQ 466
+ + R+G+
Sbjct: 171 AQMSINTRMGK 181
>gi|239751599 PREDICTED: hypothetical protein XP_002347926 [Homo
sapiens]
Length = 192
Score = 35.8 bits (81), Expect = 0.091
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 337 VLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVA 396
V L C L A S S P P E ++ PP P H ++PGS FHV+
Sbjct: 60 VQLPCCLTIAATTESPS---PPPLPTEKQSHRVAGSPPEVAGPAGRHR--VMPGSCFHVS 114
Query: 397 LPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESS-PAASFLSSR 455
++ L TP S + G P AW S G P P ELA ++ P S S
Sbjct: 115 CSKHQALLGNTPSASGLGGTC-PASAWPSVRVKGP---NPGPLEELARTAFPTHSETSET 170
Query: 456 SWQGLEPRLGQ 466
+ + R+G+
Sbjct: 171 AQMSINTRMGK 181
>gi|239746114 PREDICTED: hypothetical protein XP_002344193 [Homo
sapiens]
Length = 192
Score = 35.8 bits (81), Expect = 0.091
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 337 VLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVA 396
V L C L A S S P P E ++ PP P H ++PGS FHV+
Sbjct: 60 VQLPCCLTIAATTESPS---PPPLPTEKQSHRVAGSPPEVAGPAGRHR--VMPGSCFHVS 114
Query: 397 LPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESS-PAASFLSSR 455
++ L TP S + G P AW S G P P ELA ++ P S S
Sbjct: 115 CSKHQALLGNTPSASGLGGTC-PASAWPSVRVKGP---NPGPLEELARTAFPTHSETSET 170
Query: 456 SWQGLEPRLGQ 466
+ + R+G+
Sbjct: 171 AQMSINTRMGK 181
>gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform 3
[Homo sapiens]
Length = 462
Score = 35.4 bits (80), Expect = 0.12
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 301 AHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLL---ACPLGALAPQLSGSFFQP 357
AH R+ + +A R+ P+ A++ P V + A PL L P P
Sbjct: 180 AHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP-------P 232
Query: 358 ILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDL 417
I P L ++ PPPG+ H H P P H+A+PPP + P +
Sbjct: 233 IPPPPPLSSSFGVPPPPPGI--HYQHLMPPPPRLPPHLAVPPPGA----IPPALHLNPAF 286
Query: 418 RPPP--AWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPR---LGQTPVTEA 472
PPP D A P +S P S +S ++ + R + + +++A
Sbjct: 287 FPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSSAISKA 346
Query: 473 VSG 475
VSG
Sbjct: 347 VSG 349
>gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform 2
[Homo sapiens]
Length = 471
Score = 35.4 bits (80), Expect = 0.12
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 301 AHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLL---ACPLGALAPQLSGSFFQP 357
AH R+ + +A R+ P+ A++ P V + A PL L P P
Sbjct: 189 AHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP-------P 241
Query: 358 ILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDL 417
I P L ++ PPPG+ H H P P H+A+PPP + P +
Sbjct: 242 IPPPPPLSSSFGVPPPPPGI--HYQHLMPPPPRLPPHLAVPPPGA----IPPALHLNPAF 295
Query: 418 RPPP--AWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPR---LGQTPVTEA 472
PPP D A P +S P S +S ++ + R + + +++A
Sbjct: 296 FPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSSAISKA 355
Query: 473 VSG 475
VSG
Sbjct: 356 VSG 358
>gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform 1
[Homo sapiens]
Length = 514
Score = 35.4 bits (80), Expect = 0.12
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 301 AHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVDVFVLL---ACPLGALAPQLSGSFFQP 357
AH R+ + +A R+ P+ A++ P V + A PL L P P
Sbjct: 232 AHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP-------P 284
Query: 358 ILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDL 417
I P L ++ PPPG+ H H P P H+A+PPP + P +
Sbjct: 285 IPPPPPLSSSFGVPPPPPGI--HYQHLMPPPPRLPPHLAVPPPGA----IPPALHLNPAF 338
Query: 418 RPPP--AWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLEPR---LGQTPVTEA 472
PPP D A P +S P S +S ++ + R + + +++A
Sbjct: 339 FPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSSAISKA 398
Query: 473 VSG 475
VSG
Sbjct: 399 VSG 401
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 35.4 bits (80), Expect = 0.12
Identities = 42/152 (27%), Positives = 55/152 (36%), Gaps = 35/152 (23%)
Query: 320 GRPTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNP-AWPPPGLA 378
G P P + P + P + P LS + P+L P L +A P PPP L+
Sbjct: 559 GMPPPVMPPSLPT-------SVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLS 611
Query: 379 PHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRP 438
T ++P P A PPP PPP P
Sbjct: 612 S--TAPPPVMPLPPLSSATPPPGI----------------PPPGVPQGIP---------P 644
Query: 439 QLELAESSPAASFLSSRSWQGLEPRLGQTPVT 470
QL A PA+S SS+ + P L TPV+
Sbjct: 645 QLTAAPVPPASSSQSSQVPEKPRPALLPTPVS 676
Score = 34.7 bits (78), Expect = 0.20
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 19/135 (14%)
Query: 342 PLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPE 401
P + P L + P + P + + + PPPG+ P L+ G P LPPP
Sbjct: 543 PPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSS-----AGPP--PVLPPPS 595
Query: 402 SELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAASFLSSRSWQGLE 461
P V PPP+ S+ + L P L+ ++P QG+
Sbjct: 596 LSSAGPPPV-------LPPPSLSSTAPPPVMPLPP-----LSSATPPPGIPPPGVPQGIP 643
Query: 462 PRLGQTPVTEAVSGR 476
P+L PV A S +
Sbjct: 644 PQLTAAPVPPASSSQ 658
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 34.7 bits (78), Expect = 0.20
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 342 PLGALAPQLS---GSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALP 398
PL +PQLS G F P L P + + P A L LPGSP P
Sbjct: 791 PLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLPGSP---RPP 847
Query: 399 PPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAASFLS--SRS 456
P L +P S + R P W+ ++ + A+ P+ +L A ++ +
Sbjct: 848 SPPLGLCHSPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRAPLEHR 907
Query: 457 WQGLEPRLGQTPVT 470
EP +TP T
Sbjct: 908 ESPREPEDSETPWT 921
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1760 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1811
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1812 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1861
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1737 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1788
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1789 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1838
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1740 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1791
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1792 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1841
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1720 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1771
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1772 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1821
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1757 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1808
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1809 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1858
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1691 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1742
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1743 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1792
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1762 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1813
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1814 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1863
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 33.9 bits (76), Expect = 0.34
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 322 PTPAKLANFPEVDVFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHL 381
P PA LA P++ F L CP P S P+ P + + + PP P L
Sbjct: 1767 PAPAPLAPPPDISPFSLF-CP-----PPSPPSIPLPLPPPTFFPLSVSTSGPPT--PPLL 1818
Query: 382 THYADLLPGSPFHVALPPPESELWETPDVSLITG-----DLRPPPAWKSS 426
+ LP P + PPP S + + + ITG +L P KSS
Sbjct: 1819 PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKSS 1868
>gi|126517478 peroxidasin homolog-like [Homo sapiens]
Length = 1463
Score = 33.5 bits (75), Expect = 0.45
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 152 LSEPACAHALEALATLLRPRYLDLLVSSPAFPQPVGSLSPEPMP---LERFGRRFPLAPG 208
L +P AL A A LL+P Y D + + PVGS P P P + R + P
Sbjct: 737 LQQPTWGAALTAFARLLQPAYRDGIRAPRGLGLPVGSRQPLPPPRLVATVWARAAAVTPD 796
Query: 209 ----RRLEEYGAFYVGGSKASPDPDLDPDLSRLLLG-WAPGQPFSSCC 251
R L +G F + DLD + L ++ G+P SS C
Sbjct: 797 HSYTRMLMHWGWFL--------EHDLDHTVPALSTARFSDGRPCSSVC 836
>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
Length = 1445
Score = 33.5 bits (75), Expect = 0.45
Identities = 39/130 (30%), Positives = 48/130 (36%), Gaps = 30/130 (23%)
Query: 74 GSKMFILGDTAYGSCCVDVLG-AEQAGAQALIHFGPACLSPPARPLPVAFVLRQRSVALE 132
GS LG G C V A Q + + PA LSPPA P P+A L
Sbjct: 151 GSSHLPLGGDPLGDVCKPVPAKAHQPHGKCMQDPSPASLSPPAPPAPLASTL-------- 202
Query: 133 LCVKAFEAQNPDPKAPVVLLSEPACAHAL-------EALATLLRPRYLDLLVSSPAFPQP 185
+P P + SEP H+ E L L P +V P+ PQP
Sbjct: 203 ---------SPGP----MTFSEPFGPHSTLSASGPPEPLLPLKCPATQPHVVFPPS-PQP 248
Query: 186 VGSLSPEPMP 195
G L+ P P
Sbjct: 249 HGPLASSPPP 258
Score = 30.0 bits (66), Expect = 5.0
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 11/64 (17%)
Query: 395 VALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAASFLSS 454
+A PPPE E G RPP +S++ HG P S P L
Sbjct: 920 LAAPPPEQE-----------GVQRPPRGSQSADTHGRSEAFPTGHKGRGCSQPPTCSLVG 968
Query: 455 RSWQ 458
R+WQ
Sbjct: 969 RTWQ 972
>gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 959
Score = 32.7 bits (73), Expect = 0.77
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 316 VLALGRPTPAKLANFPEVD-VFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPP 374
+L LG P L VD + ++L PL + P +G+ A + E P P
Sbjct: 183 LLVLGLKLPVSLMLALLVDGLLLVLHAPLSNVVPTWAGA-----TAGTQREGPSQPGIQP 237
Query: 375 PGLAPHLTHYADLLPGSPFHVALPPPESELWETPDVSLITGDLRPPPAWKSS 426
P P + P S PP LW + SL TG P +W +S
Sbjct: 238 PAPLPQHRDLPTVAPSSQALFLTPPHHVCLWSSGVPSLATGP-SPKLSWLTS 288
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 32.3 bits (72), Expect = 1.0
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 357 PILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSPFHVALPPPES-ELWETPDVSLITG 415
P LAP AC PP APH+T +A PG P H PP + E P L G
Sbjct: 301 PALAPAP---ACPLPTSPPVPAPHVTPHA---PGPPDHPNQPPMMTCERLPCPTAGL--G 352
Query: 416 DLRPPPAWKSSNDHGSLALTPRPQLELAESSPAA 449
LR A K L P P L ++ P A
Sbjct: 353 PLR-EEAMKPGAASSPLQQVPAPPLPAKKNLPTA 385
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 32.0 bits (71), Expect = 1.3
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 143 PDPKAPVVLLSEPACAHA---LEALATLLRPRYLDLLVSSPAFPQ-PVGSLSP 191
P P+AP L + PA A L A TL PR +L+S PA Q P+G+L+P
Sbjct: 2411 PAPEAPPALKAPPATTPASMPLGAAPTL--PRLAPVLLSGPALAQPPLGNLAP 2461
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 32.0 bits (71), Expect = 1.3
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 143 PDPKAPVVLLSEPACAHA---LEALATLLRPRYLDLLVSSPAFPQ-PVGSLSP 191
P P+AP L + PA A L A TL PR +L+S PA Q P+G+L+P
Sbjct: 2327 PAPEAPPALKAPPATTPASMPLGAAPTL--PRLAPVLLSGPALAQPPLGNLAP 2377
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,109,858
Number of Sequences: 37866
Number of extensions: 1332837
Number of successful extensions: 3966
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 3893
Number of HSP's gapped (non-prelim): 132
length of query: 489
length of database: 18,247,518
effective HSP length: 106
effective length of query: 383
effective length of database: 14,233,722
effective search space: 5451515526
effective search space used: 5451515526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.