Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21536320
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
(756 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 1607 0.0
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 1607 0.0
gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b ... 584 e-166
gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a ... 584 e-166
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 476 e-134
gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens] 112 2e-24
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 99 2e-20
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 75 3e-13
gi|47132519 Ras association and pleckstrin homology domains 1 is... 74 4e-13
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 71 3e-12
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 70 6e-12
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 70 6e-12
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho... 70 7e-12
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom... 70 7e-12
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 69 1e-11
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 69 2e-11
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 69 2e-11
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 69 2e-11
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 68 4e-11
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 68 4e-11
gi|150417989 cyclin K isoform 1 [Homo sapiens] 67 6e-11
gi|150170670 piccolo isoform 2 [Homo sapiens] 67 8e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 67 8e-11
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 66 1e-10
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 65 2e-10
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 65 2e-10
gi|146134388 YLP motif containing 1 [Homo sapiens] 65 2e-10
gi|55750053 atrophin-1 [Homo sapiens] 65 2e-10
gi|55750041 atrophin-1 [Homo sapiens] 65 2e-10
gi|8923842 forkhead box J2 [Homo sapiens] 65 2e-10
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 1607 bits (4162), Expect = 0.0
Identities = 756/756 (100%), Positives = 756/756 (100%)
Query: 1 MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ 60
MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ
Sbjct: 1 MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ 60
Query: 61 LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDL 120
LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDL
Sbjct: 61 LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDL 120
Query: 121 HFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 180
HFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH
Sbjct: 121 HFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 180
Query: 181 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 240
VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND
Sbjct: 181 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 240
Query: 241 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI 300
VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI
Sbjct: 241 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI 300
Query: 301 QHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD 360
QHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD
Sbjct: 301 QHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD 360
Query: 361 KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP 420
KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP
Sbjct: 361 KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP 420
Query: 421 FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFI 480
FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFI
Sbjct: 421 FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFI 480
Query: 481 ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG 540
ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG
Sbjct: 481 ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG 540
Query: 541 GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ 600
GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ
Sbjct: 541 GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ 600
Query: 601 PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP 660
PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP
Sbjct: 601 PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP 660
Query: 661 PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYA 720
PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYA
Sbjct: 661 PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYA 720
Query: 721 QQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ 756
QQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ
Sbjct: 721 QQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ 756
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 1607 bits (4162), Expect = 0.0
Identities = 756/756 (100%), Positives = 756/756 (100%)
Query: 1 MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ 60
MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ
Sbjct: 101 MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ 160
Query: 61 LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDL 120
LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDL
Sbjct: 161 LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDL 220
Query: 121 HFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 180
HFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH
Sbjct: 221 HFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 280
Query: 181 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 240
VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND
Sbjct: 281 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 340
Query: 241 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI 300
VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI
Sbjct: 341 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI 400
Query: 301 QHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD 360
QHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD
Sbjct: 401 QHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMD 460
Query: 361 KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP 420
KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP
Sbjct: 461 KMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRP 520
Query: 421 FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFI 480
FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFI
Sbjct: 521 FEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFI 580
Query: 481 ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG 540
ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG
Sbjct: 581 ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG 640
Query: 541 GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ 600
GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ
Sbjct: 641 GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ 700
Query: 601 PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP 660
PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP
Sbjct: 701 PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP 760
Query: 661 PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYA 720
PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYA
Sbjct: 761 PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYA 820
Query: 721 QQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ 756
QQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ
Sbjct: 821 QQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ 856
>gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b
[Homo sapiens]
Length = 806
Score = 584 bits (1505), Expect = e-166
Identities = 304/555 (54%), Positives = 383/555 (69%), Gaps = 47/555 (8%)
Query: 72 KRPYEENRGRGYFEHREDR---RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDR 128
KRP E++ GRGYFE+ E+ R +SPQPP EE+++ FDDT+V +DTYNCDLHFK++RDR
Sbjct: 228 KRPREDH-GRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDR 286
Query: 129 SSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL 188
S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWSL
Sbjct: 287 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 346
Query: 189 DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKN 248
+ LGEE FSYGY G K+ N E+YG+KF ENDVI CFA+FE ++VELS+ KN
Sbjct: 347 TTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFE-SDEVELSYAKN 405
Query: 249 GKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSER 308
G+ +G+AF+I KE L G+ L+PHVL NCAVEFNFGQ+ +PY + +TFIQ++PL +R
Sbjct: 406 GQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDR 465
Query: 309 IRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLR 368
+RG GP+ K +CE++MM+GLP AGKTTW KHAA NP K YNILGTN IMDKM V G +
Sbjct: 466 VRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKMMVAGFK 524
Query: 369 RQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKA 428
+Q G+ + L+Q+A QCL + I+IAARKKRN+ILDQTNV +AQRRKM F GFQRKA
Sbjct: 525 KQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKA 584
Query: 429 IVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEAD 488
+V+CP DED K RT K+ + EGKD+P+HAVL+MK NFTLP+V + DE+ ++ELQ+EEA
Sbjct: 585 VVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQ 644
Query: 489 KLVRQYNEEGRKAGPPPEKRFDNRG----------------GGGFRGRGG----GGGFQR 528
KL+ QY EE +KA PP +K+ N G GGG RGRGG GG F
Sbjct: 645 KLLEQYKEESKKALPPEKKQ--NTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNF-- 700
Query: 529 YENRGPPGGNRGGFQ------NRGGGSGGGGNYRGGFNRS----GGGGYSQ----NRWGN 574
RG GNRGG+ RGGG GG G + R+ G G YS NR G
Sbjct: 701 ---RGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVFPGRGSYSNRGNYNRGGM 757
Query: 575 NNRDNNNSNNRGSYN 589
NR N N N RG N
Sbjct: 758 PNRGNYNQNFRGRGN 772
>gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a
[Homo sapiens]
Length = 825
Score = 584 bits (1505), Expect = e-166
Identities = 304/555 (54%), Positives = 383/555 (69%), Gaps = 47/555 (8%)
Query: 72 KRPYEENRGRGYFEHREDR---RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDR 128
KRP E++ GRGYFE+ E+ R +SPQPP EE+++ FDDT+V +DTYNCDLHFK++RDR
Sbjct: 247 KRPREDH-GRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDR 305
Query: 129 SSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL 188
S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWSL
Sbjct: 306 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 365
Query: 189 DSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKN 248
+ LGEE FSYGY G K+ N E+YG+KF ENDVI CFA+FE ++VELS+ KN
Sbjct: 366 TTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFE-SDEVELSYAKN 424
Query: 249 GKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSER 308
G+ +G+AF+I KE L G+ L+PHVL NCAVEFNFGQ+ +PY + +TFIQ++PL +R
Sbjct: 425 GQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDR 484
Query: 309 IRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLR 368
+RG GP+ K +CE++MM+GLP AGKTTW KHAA NP K YNILGTN IMDKM V G +
Sbjct: 485 VRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGK-YNILGTNTIMDKMMVAGFK 543
Query: 369 RQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKA 428
+Q G+ + L+Q+A QCL + I+IAARKKRN+ILDQTNV +AQRRKM F GFQRKA
Sbjct: 544 KQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKA 603
Query: 429 IVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEAD 488
+V+CP DED K RT K+ + EGKD+P+HAVL+MK NFTLP+V + DE+ ++ELQ+EEA
Sbjct: 604 VVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQ 663
Query: 489 KLVRQYNEEGRKAGPPPEKRFDNRG----------------GGGFRGRGG----GGGFQR 528
KL+ QY EE +KA PP +K+ N G GGG RGRGG GG F
Sbjct: 664 KLLEQYKEESKKALPPEKKQ--NTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNF-- 719
Query: 529 YENRGPPGGNRGGFQ------NRGGGSGGGGNYRGGFNRS----GGGGYSQ----NRWGN 574
RG GNRGG+ RGGG GG G + R+ G G YS NR G
Sbjct: 720 ---RGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVFPGRGSYSNRGNYNRGGM 776
Query: 575 NNRDNNNSNNRGSYN 589
NR N N N RG N
Sbjct: 777 PNRGNYNQNFRGRGN 791
Score = 30.0 bits (66), Expect = 8.3
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 25/101 (24%)
Query: 503 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNR- 561
PP ++ + GG + GGGGG G PG G G GG+ + G R
Sbjct: 200 PPGARQGQQQAGGKKKAEGGGGG-------GRPGAPAAG---DGKTEQKGGDKKRGVKRP 249
Query: 562 --SGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQ 600
G GY + N Y+RA QPP ++
Sbjct: 250 REDHGRGYFEYIEEN------------KYSRAKSPQPPVEE 278
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 476 bits (1226), Expect = e-134
Identities = 253/529 (47%), Positives = 346/529 (65%), Gaps = 30/529 (5%)
Query: 71 RKRPYEENRGRGYFEHREDR---RGRSPQPPAEEDEDDFDD-TLVAIDTYNCDLHFKVAR 126
R+R ++ GR Y+E RE+ R +SP PP EE +D+ +D TLV +DTY DLHF+V++
Sbjct: 202 RQRDEKDEHGRAYYEFREEAYHSRSKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 261
Query: 127 DRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGW 186
DR G PL E F LWSGAR++YGV +G+VCFE K+ + + +K TE ++R+GW
Sbjct: 262 DRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKE-GCTEVS--LLRVGW 318
Query: 187 SLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFT 246
S+D QLGE+ FSYG+ G G K+ N +FE +G F ENDVIGCFA+FE +VELSF+
Sbjct: 319 SVDFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFET-EEVELSFS 377
Query: 247 KNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLS 306
KNG+ +G+AF I K++L +AL PHVL KNC VE NFGQ+ EP+ F FI +P+
Sbjct: 378 KNGEDLGVAFWISKDSLADRALLPHVLCKNCVVELNFGQKEEPFFPPPEEFVFIHAVPVE 437
Query: 307 ERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMG 366
ER+R V PK+ ECE+++MVGLP +GKT WA+K+A NP K+YN+LG ++++MR+ G
Sbjct: 438 ERVRTAVPPKTIEECEVILMVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKG 497
Query: 367 LRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQR 426
L D+L+QQA+QCL++L+QIA+R KRN+ILDQ NVY S QRRK+ F+ F R
Sbjct: 498 LEEPEMDPKSRDLLVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSR 557
Query: 427 KAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREE 486
K +V+ P +ED K R R + EG DVP+ +LEMKANF+LP+ D++DEV + EL++EE
Sbjct: 558 KVVVVVPNEEDWKKRLELRKEVEGDDVPESIMLEMKANFSLPEKCDYMDEVTYGELEKEE 617
Query: 487 ADKLVRQYNEEGRKAGPPPEKRFDNRGG-------GGFRGRGGGGGFQR-YENR------ 532
A +V +Y EE RK PP EKR + R RG+G GG +R Y+NR
Sbjct: 618 AQPIVTKYKEEARKLLPPSEKRTNRRNNRNKRNRQNRSRGQGYVGGQRRGYDNRAYGQQY 677
Query: 533 -GPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNN 580
G P GNRGG++N YRG ++R G Y NR+ + R N
Sbjct: 678 WGQP-GNRGGYRN------FYDRYRGDYDRFYGRDYEYNRYRDYYRQYN 719
>gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
Length = 740
Score = 112 bits (279), Expect = 2e-24
Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 23/165 (13%)
Query: 127 DRSSGYPLTIEGFAYL------WSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 180
DR S + + +G W G RA+ G+ +G+ +E+ + D
Sbjct: 97 DRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCH-------------DQG 143
Query: 181 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 240
+ R+GWS S LG + F +G+GGTGKKS N +F+NYG++F +D IGC+ D + G+
Sbjct: 144 LCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH- 202
Query: 241 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQ 285
+ F+KNGK +G+AF I + QAL+P ++KN ++FNFG+
Sbjct: 203 --VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGE 244
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 98.6 bits (244), Expect = 2e-20
Identities = 80/218 (36%), Positives = 91/218 (41%), Gaps = 42/218 (19%)
Query: 517 FRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGG--NYRGGFNRSGGGGYSQNRWGN 574
FR RGGGGG GF RGGG G GG ++R + G G +QNR G
Sbjct: 6 FRSRGGGGG---------------GFHRRGGGGGRGGLHDFR---SPPPGMGLNQNR-GP 46
Query: 575 NNRDNNNSNNRGSYNRAP----QQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYN 630
S + P QQQPPPQQPPP QPPP QPPP P + PP +
Sbjct: 47 MGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDS 106
Query: 631 KNSNI---PGSSANT-STPTVSSYSPP--QPSYSQPPYNQGGYSQGYTAPPPP-----PP 679
+ PG + S P SS +PP P+ PP G G T PPP PP
Sbjct: 107 SKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPP----GSGPGPTPTPPPAVTSAPP 162
Query: 680 --PPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 715
PPP P PPPPP A P P Q
Sbjct: 163 GAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200
Score = 37.7 bits (86), Expect = 0.040
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 16/92 (17%)
Query: 597 PPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPS 656
PPQ PP PP P P P P G K +PG P +S+
Sbjct: 178 PPQAGGPPPPPAAVPGPGPGPKQGPGPGGP----KGGKMPGGPKPGGGPGLST----PGG 229
Query: 657 YSQPPYNQGGYSQGYTAPPPP--------PPP 680
+ +PP+ GG +G PP PPP
Sbjct: 230 HPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPP 261
Score = 32.3 bits (72), Expect = 1.7
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 19/99 (19%)
Query: 503 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRS 562
PPP G G +G G GG P GG G GGG G +
Sbjct: 185 PPPPAAVPGPGPGPKQGPGPGG---------PKGGKMPGGPKPGGGPG--------LSTP 227
Query: 563 GGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQP 601
GG +R G R + Y++ Q PPP P
Sbjct: 228 GGHPKPPHRGGGEPRGGRQ--HHPPYHQQHHQGPPPGGP 264
Score = 31.6 bits (70), Expect = 2.8
Identities = 30/105 (28%), Positives = 36/105 (34%), Gaps = 21/105 (20%)
Query: 483 QREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGG---------------FRGRGGGGGFQ 527
QRE +++ RQ E + G + D R GGG F GGGGG
Sbjct: 582 QREMEEQMRRQREESYSRMGYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIG 641
Query: 528 RYENRGPPGGNRGG------FQNRGGGSGGGGNYRGGFNRSGGGG 566
N G P G + G GG G G R G G
Sbjct: 642 YEANPGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQGPRGMGPG 686
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 74.7 bits (182), Expect = 3e-13
Identities = 74/287 (25%), Positives = 103/287 (35%), Gaps = 76/287 (26%)
Query: 511 NRGGGGFRGRGGGGGFQRYENRGPPGGN-RGGFQNRGGGSGGGGNYR--------GGFNR 561
+RGG G G+G GG + +G GG+ GG Q GGG G GG GG N
Sbjct: 529 SRGGQGSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPGDGHGSGGGKNS 588
Query: 562 SGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPS----- 616
GG G + + + + S + SY Q Q PPPP PP PPPPP+
Sbjct: 589 GGGKGSGSGKGSDGDGERGKSLKKRSYFGKLTQSKQQQMPPPPPPP---PPPPPAGGTGG 645
Query: 617 ----------------------------------YSPARNPPGASTYNKNSNIP--GSSA 640
AR P A ++++ + P
Sbjct: 646 KGKSGGRFRLYFCVDRGATKECKEAKEVKDAEIPEGAARGPHRARAFDEDEDDPYVPMRP 705
Query: 641 NTSTPTVSS--YSPPQPS--------YSQPPYNQGGYSQGY------TAPPPPPPPPPAY 684
+TP VSS Y P P +S+ P+ S+GY +PPP P PP A
Sbjct: 706 GVATPLVSSSDYMPMAPQNVSASKKRHSRSPFED---SRGYMMMFPRVSPPPAPSPPKAP 762
Query: 685 NYG----SYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYY 727
+ S + + Y P P Q ++ W+ Y+
Sbjct: 763 DTNKEDDSKDNDSESDYMFMAPGAGAIPKNPRNPQGGSSSKSWSSYF 809
Score = 48.1 bits (113), Expect = 3e-05
Identities = 44/174 (25%), Positives = 54/174 (31%), Gaps = 12/174 (6%)
Query: 521 GGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNN 580
G GG + P N G RG G G G N +G + S GG G +R
Sbjct: 482 GSGGDYM-------PMNNWGSGNGRGSGGGQGSNGQGSSSHSSGGNQCSGE-GQGSRGGQ 533
Query: 581 NSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSA 640
SN +GS + Q+P + P N G
Sbjct: 534 GSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPGDGHGSGGGKNSGGGKG 593
Query: 641 NTSTPTVSSYSPPQPSYSQPPY----NQGGYSQGYTAPPPPPPPPPAYNYGSYG 690
+ S S + Y Q Q PPPPPPPPPA G G
Sbjct: 594 SGSGKGSDGDGERGKSLKKRSYFGKLTQSKQQQMPPPPPPPPPPPPAGGTGGKG 647
Score = 30.4 bits (67), Expect = 6.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 90 RRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHF 122
R R P+PP ED D+ DDT V +D D F
Sbjct: 1218 RSRRVPRPPEREDSDNDDDTHVRMDFARRDNQF 1250
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 74.3 bits (181), Expect = 4e-13
Identities = 49/138 (35%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 591 APQQQPP-PQQPPPPQPPPQQPPPPPSYSPARNPPGAST----YNKNSNIPGSSANTSTP 645
A Q PP P PPPP PPP PPPPP P+++ P A + + K S I N S
Sbjct: 621 ASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTIT-RLQNASQH 679
Query: 646 TVSSYSPPQP--SYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPP 703
+ + + PP P SQ Q PPPPPPPPP + PAP P P
Sbjct: 680 SGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQ 739
Query: 704 TAQTYPQPSYNQYQQYAQ 721
+ P +Q Q Q
Sbjct: 740 FSAPPPPLKIHQVQHITQ 757
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/126 (30%), Positives = 46/126 (36%), Gaps = 35/126 (27%)
Query: 593 QQQPPPQQPPPPQP---PPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSS 649
Q PP PPPP P PPQ PP P PA +S T P V+
Sbjct: 757 QVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAP----------------TSTKTVAPVVTQ 800
Query: 650 YSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTY- 708
+PP P+ PP + PP PP P P P PP P Q++
Sbjct: 801 AAPPTPTPPVPPAKKQPAFPASYIPPSPPTP-------------PVPVPPPTLPKQQSFC 847
Query: 709 --PQPS 712
P PS
Sbjct: 848 AKPPPS 853
Score = 51.2 bits (121), Expect = 3e-06
Identities = 36/119 (30%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 591 APQQQPPPQQ------PPPPQPPPQQPPPPP---------SYSPARNPPGASTYNKNSNI 635
+P PPP + PPPP P P PPPPP S SP + S+
Sbjct: 913 SPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPP 972
Query: 636 PGSSANTSTPTVSSYSPPQP---------SYSQPPYNQGGYSQGYTAPPPPPPPPPAYN 685
P N+S + S P+P S PP G S+ PP PP P N
Sbjct: 973 PTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLN 1031
Score = 50.8 bits (120), Expect = 5e-06
Identities = 47/149 (31%), Positives = 52/149 (34%), Gaps = 40/149 (26%)
Query: 587 SYNRAPQQQPPPQQPPPPQPPPQ----QPPPPP------------SYSPARNPPGASTYN 630
SY PP PPP P Q +PPP P S P P A
Sbjct: 822 SYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQ 881
Query: 631 KNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPP-------PPPPPPPA 683
+P + A S P V + QPS P S + PP PPPPP P
Sbjct: 882 PLKPVPANVAPQSPPAVKAKPKWQPSSIPVP------SPDFPPPPPESSLVFPPPPPSPV 935
Query: 684 YNYGSYGGYNPAPYTPPPPPTAQTYPQPS 712
PAP PPPPPTA P S
Sbjct: 936 ----------PAP-PPPPPPTASPTPDKS 953
Score = 50.1 bits (118), Expect = 8e-06
Identities = 40/129 (31%), Positives = 46/129 (35%), Gaps = 34/129 (26%)
Query: 591 APQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSY 650
AP PPP P P PPQ PP P PA +S T P V+
Sbjct: 759 APPTPPPPPPIPAPL-PPQAPPKPLVTIPA----------------PTSTKTVAPVVTQA 801
Query: 651 SPPQPSYSQPP-YNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTP------PPPP 703
+PP P+ PP Q + Y P PP PP P P P P PP
Sbjct: 802 APPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPV----------PPPTLPKQQSFCAKPP 851
Query: 704 TAQTYPQPS 712
+ P PS
Sbjct: 852 PSPLSPVPS 860
Score = 48.5 bits (114), Expect = 2e-05
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 33/118 (27%)
Query: 596 PPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQP 655
PP PPP PPP PPP P + A+ P + S P S+ PP
Sbjct: 704 PPNGVVPPPPPPP--PPPTPGSAMAQLKP-------------APCAPSLPQFSAPPPPLK 748
Query: 656 SYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTP-PPPPTAQTYPQPS 712
+ Q APP PPPPPP PAP P PP T P P+
Sbjct: 749 IHQVQHITQ-------VAPPTPPPPPPI----------PAPLPPQAPPKPLVTIPAPT 789
Score = 45.8 bits (107), Expect = 1e-04
Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 23/130 (17%)
Query: 592 PQQQP---PPQQPPPPQPPPQQ----PPPPPSYSPA---RNPPGASTYNKNSNIPGSSAN 641
P+ QP P P P PPP+ PPPPPS PA PP AS S PG +
Sbjct: 902 PKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTS 961
Query: 642 TSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPP---------PPPAYNYGSYGGY 692
++ PP P + + S G P P P PPA +
Sbjct: 962 KTSSPGGKKPPPTPQRNSSIKS----SSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKET 1017
Query: 693 NPAPYTPPPP 702
P P PP P
Sbjct: 1018 LPPPAAPPKP 1027
Score = 44.7 bits (104), Expect = 3e-04
Identities = 46/151 (30%), Positives = 54/151 (35%), Gaps = 44/151 (29%)
Query: 589 NRAPQQQP-----PPQQPPP-PQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANT 642
N APQ P P QP P P P PPPPP S PP S
Sbjct: 889 NVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPS--------------- 933
Query: 643 STPTVSSYSPPQPSYSQPPYNQG--GYSQGYTAPP--PPPPPPPAYN---YGSYGGYNPA 695
P + PP P+ S P G G T+ P PPP P N S G +P
Sbjct: 934 --PVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPE 991
Query: 696 P-----------YTPPP---PPTAQTYPQPS 712
P +TPP P+ +T P P+
Sbjct: 992 PKRPSVDSLVSKFTPPAESGSPSKETLPPPA 1022
Score = 35.4 bits (80), Expect = 0.20
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 642 TSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPP 701
+S + S + P S P Q YTA P PP PP P P PPP
Sbjct: 590 SSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPP---------PPPPPPPPP 640
Query: 702 PPTAQTYPQPS 712
PP P PS
Sbjct: 641 PPPPPPPPLPS 651
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 71.2 bits (173), Expect = 3e-12
Identities = 42/116 (36%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
Query: 596 PPPQQPPP----PQPPPQQ----PPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTV 647
PPP PPP P PPP + PPPPPS +P PP + +P N P
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPP 346
Query: 648 SSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPP 703
P PP G APPPPPPPPP P PPPPP
Sbjct: 347 PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP-------------PPGPPPPP 389
Score = 61.2 bits (147), Expect = 3e-09
Identities = 43/124 (34%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 599 QQPPPPQPPPQQPPPPPSYSPARN--PPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPS 656
+Q PPP PP + PPPP P + PP + P S A T+ P S P +
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVA 333
Query: 657 YSQPPYNQGGYSQGYTAPPP---------PPPPPPAYNYGSYGGYNPAPYTPPPPPTAQT 707
PP N + Y PPP PPPPPP S G P PPPPP
Sbjct: 334 VPPPPPN-----RMYPPPPPALPSSAPSGPPPPPP-----SVLGVGPVAPPPPPPPPPPP 383
Query: 708 YPQP 711
P P
Sbjct: 384 GPPP 387
Score = 35.4 bits (80), Expect = 0.20
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 10/40 (25%)
Query: 591 APQQQPPPQQ----------PPPPQPPPQQPPPPPSYSPA 620
AP PPP PPPP PPP PPPP P+
Sbjct: 354 APSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPS 393
Score = 34.3 bits (77), Expect = 0.44
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 592 PQQQPPPQQPPPPQ-----PPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSAN 641
P P PPPP P PPPPP P PP + + +P ++ N
Sbjct: 351 PSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGN 405
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 70.5 bits (171), Expect = 6e-12
Identities = 77/265 (29%), Positives = 98/265 (36%), Gaps = 74/265 (27%)
Query: 500 KAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGF 559
++ P +K GGG G GGGGGF GG GGG GGGG++ GG
Sbjct: 54 RSAPILDKPKGAGAGGGGGGFGGGGGF-------------GG----GGGGGGGGSFGGGG 96
Query: 560 NRSGGGGYSQNR---WGNNNRDNNNSNNR------GSYNRAPQQQPPPQQP---PPPQPP 607
GG + NRDN++ +R G + + + PP P P P P
Sbjct: 97 PPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPG 156
Query: 608 PQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSY----SPP--------QP 655
+ PP P + PP +K +IP +T P SS SPP P
Sbjct: 157 HRSGPPEPQRN-RMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSP 215
Query: 656 SYSQPPY--NQGG-----------------YSQGYTAPP---------PPPPPPPAYNYG 687
+ PP+ N+G +S PP PPPPPPP N
Sbjct: 216 GPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRP 275
Query: 688 SYGGYNPAPYTPPPPPTAQTYPQPS 712
S PPPPP P PS
Sbjct: 276 SIH----REAVPPPPPQNNKPPVPS 296
Score = 61.6 bits (148), Expect = 3e-09
Identities = 69/250 (27%), Positives = 82/250 (32%), Gaps = 56/250 (22%)
Query: 513 GGGGFRGRGGGGGFQRYENRGPPGGNRGGFQ-------------NRGGGS-------GGG 552
GGGGF G GGGGG + GPPG G FQ N GGS GG
Sbjct: 76 GGGGFGGGGGGGGGGSFGGGGPPGLG-GLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGR 134
Query: 553 GNYRGGFNR-SGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPP-------- 603
F+ SG G + G+ + NR R P PPP
Sbjct: 135 STSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPI 194
Query: 604 ------------------PQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTP 645
P P P PP P + A +S+ P S+ P
Sbjct: 195 QSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP 254
Query: 646 TVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPP----PPPPAYNYGSYGGYNPAPYTPPP 701
T S +P PP PPPPP PP P+ S P PPP
Sbjct: 255 TPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP----PPP 310
Query: 702 PPTAQTYPQP 711
PP ++ P P
Sbjct: 311 PPPSRPGPPP 320
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/145 (29%), Positives = 56/145 (38%), Gaps = 18/145 (12%)
Query: 583 NNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANT 642
NN+ P+ Q PPPP PP + PPP S + N +N ++ S+
Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL 348
Query: 643 STPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP-----------PPAYNYGSYGG 691
+P S PP PS PP + G + P PPPPP P S G
Sbjct: 349 PSPGRSGPLPPPPSERPPPPVRD--PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSG 406
Query: 692 YN-----PAPYTPPPPPTAQTYPQP 711
+ P P PP P+A P P
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPP 431
Score = 57.4 bits (137), Expect = 5e-08
Identities = 44/126 (34%), Positives = 48/126 (38%), Gaps = 21/126 (16%)
Query: 584 NRGSYNRAPQQQPPPQQPPPPQPPP-------QQPPPPPSYSPARNPPGASTYNKNSNIP 636
NR S +R PPPQ PP P Q PPPPP S PP P
Sbjct: 273 NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLP---------P 323
Query: 637 GSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAP 696
SS N TP + + S S PP G S PP PPPP + G P
Sbjct: 324 SSSGNDETPRLPQRNLSLSS-STPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG----P 378
Query: 697 YTPPPP 702
PPPP
Sbjct: 379 LPPPPP 384
Score = 54.7 bits (130), Expect = 3e-07
Identities = 43/148 (29%), Positives = 55/148 (37%), Gaps = 16/148 (10%)
Query: 573 GNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARN---PPGASTY 629
GN+ N + P P + P P PP ++PPPP P R+ PP
Sbjct: 327 GNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVS 386
Query: 630 NKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYN---- 685
S A P+ S P+ S +PP S G APPPPPP N
Sbjct: 387 RNGSTSRALPATPQLPSRSGVDSPR-SGPRPPLPPDRPSAG--APPPPPPSTSIRNGFQD 443
Query: 686 ------YGSYGGYNPAPYTPPPPPTAQT 707
+ S ++P PPP P QT
Sbjct: 444 SPCEDEWESRFYFHPISDLPPPEPYVQT 471
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 70.5 bits (171), Expect = 6e-12
Identities = 77/265 (29%), Positives = 98/265 (36%), Gaps = 74/265 (27%)
Query: 500 KAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGF 559
++ P +K GGG G GGGGGF GG GGG GGGG++ GG
Sbjct: 54 RSAPILDKPKGAGAGGGGGGFGGGGGF-------------GG----GGGGGGGGSFGGGG 96
Query: 560 NRSGGGGYSQNR---WGNNNRDNNNSNNR------GSYNRAPQQQPPPQQP---PPPQPP 607
GG + NRDN++ +R G + + + PP P P P P
Sbjct: 97 PPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPG 156
Query: 608 PQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSY----SPP--------QP 655
+ PP P + PP +K +IP +T P SS SPP P
Sbjct: 157 HRSGPPEPQRN-RMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSP 215
Query: 656 SYSQPPY--NQGG-----------------YSQGYTAPP---------PPPPPPPAYNYG 687
+ PP+ N+G +S PP PPPPPPP N
Sbjct: 216 GPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRP 275
Query: 688 SYGGYNPAPYTPPPPPTAQTYPQPS 712
S PPPPP P PS
Sbjct: 276 SIH----REAVPPPPPQNNKPPVPS 296
Score = 61.6 bits (148), Expect = 3e-09
Identities = 69/250 (27%), Positives = 82/250 (32%), Gaps = 56/250 (22%)
Query: 513 GGGGFRGRGGGGGFQRYENRGPPGGNRGGFQ-------------NRGGGS-------GGG 552
GGGGF G GGGGG + GPPG G FQ N GGS GG
Sbjct: 76 GGGGFGGGGGGGGGGSFGGGGPPGLG-GLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGR 134
Query: 553 GNYRGGFNR-SGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPP-------- 603
F+ SG G + G+ + NR R P PPP
Sbjct: 135 STSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPI 194
Query: 604 ------------------PQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTP 645
P P P PP P + A +S+ P S+ P
Sbjct: 195 QSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP 254
Query: 646 TVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPP----PPPPAYNYGSYGGYNPAPYTPPP 701
T S +P PP PPPPP PP P+ S P PPP
Sbjct: 255 TPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP----PPP 310
Query: 702 PPTAQTYPQP 711
PP ++ P P
Sbjct: 311 PPPSRPGPPP 320
Score = 59.3 bits (142), Expect = 1e-08
Identities = 43/145 (29%), Positives = 56/145 (38%), Gaps = 18/145 (12%)
Query: 583 NNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANT 642
NN+ P+ Q PPPP PP + PPP S + N +N ++ S+
Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL 348
Query: 643 STPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP-----------PPAYNYGSYGG 691
+P S PP PS PP + G + P PPPPP P S G
Sbjct: 349 PSPGRSGPLPPPPSERPPPPVRD--PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSG 406
Query: 692 YN-----PAPYTPPPPPTAQTYPQP 711
+ P P PP P+A P P
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPP 431
Score = 57.4 bits (137), Expect = 5e-08
Identities = 44/126 (34%), Positives = 48/126 (38%), Gaps = 21/126 (16%)
Query: 584 NRGSYNRAPQQQPPPQQPPPPQPPP-------QQPPPPPSYSPARNPPGASTYNKNSNIP 636
NR S +R PPPQ PP P Q PPPPP S PP P
Sbjct: 273 NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLP---------P 323
Query: 637 GSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAP 696
SS N TP + + S S PP G S PP PPPP + G P
Sbjct: 324 SSSGNDETPRLPQRNLSLSS-STPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG----P 378
Query: 697 YTPPPP 702
PPPP
Sbjct: 379 LPPPPP 384
Score = 54.7 bits (130), Expect = 3e-07
Identities = 43/148 (29%), Positives = 55/148 (37%), Gaps = 16/148 (10%)
Query: 573 GNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARN---PPGASTY 629
GN+ N + P P + P P PP ++PPPP P R+ PP
Sbjct: 327 GNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVS 386
Query: 630 NKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYN---- 685
S A P+ S P+ S +PP S G APPPPPP N
Sbjct: 387 RNGSTSRALPATPQLPSRSGVDSPR-SGPRPPLPPDRPSAG--APPPPPPSTSIRNGFQD 443
Query: 686 ------YGSYGGYNPAPYTPPPPPTAQT 707
+ S ++P PPP P QT
Sbjct: 444 SPCEDEWESRFYFHPISDLPPPEPYVQT 471
>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
sapiens]
Length = 898
Score = 70.1 bits (170), Expect = 7e-12
Identities = 58/196 (29%), Positives = 76/196 (38%), Gaps = 25/196 (12%)
Query: 503 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSG----GGGNYRGG 558
PPP R RGG RGRG G GF G N GG+ N G G G GG + G
Sbjct: 639 PPPNLRGRGRGGS-IRGRGRGRGF--------GGANHGGYMNAGAGYGSYGYGGNSATAG 689
Query: 559 FNR-SGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSY 617
+++ GG+S N G S+ GSY + P PP +QP +
Sbjct: 690 YSQFYSNGGHSGNASGGGGGGGGGSSGYGSYYQGDNYNSP---VPPKHAGKKQP-----H 741
Query: 618 SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP 677
+ P S Y + G + + S+Y PPQ + QG YS + P
Sbjct: 742 GGQQKPSYGSGYQSHQ---GQQQSYNQSPYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPG 798
Query: 678 PPPPPAYNYGSYGGYN 693
YNY S Y+
Sbjct: 799 GGGGSDYNYESKFNYS 814
Score = 44.7 bits (104), Expect = 3e-04
Identities = 50/207 (24%), Positives = 62/207 (29%), Gaps = 77/207 (37%)
Query: 494 YNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQR------------YENRGPPGGNRGG 541
Y + + PP+ + GG + G G+Q Y N GPP G + G
Sbjct: 721 YQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSPYSNYGPPQGKQKG 780
Query: 542 FQNR-------------GGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSY 588
+ + GGG G NY FN SG GG R NS G
Sbjct: 781 YNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGG----------RSGGNSYGSGG- 829
Query: 589 NRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVS 648
SY+P + G S S
Sbjct: 830 --------------------------ASYNP----------GSHGGYGGGSGGGS----- 848
Query: 649 SYSPPQPSYSQPPYNQGGYSQGYTAPP 675
SY Q YSQ YN G Q Y+ PP
Sbjct: 849 SYQGKQGGYSQSNYNSPGSGQNYSGPP 875
Score = 44.7 bits (104), Expect = 3e-04
Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 494 YNEEGRKAGPPP--EKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGG 551
YN G G E +F+ G GG R GG + G N G GGGSGG
Sbjct: 794 YNSPGGGGGSDYNYESKFNYSGSGG---RSGGNSY----GSGGASYNPGSHGGYGGGSGG 846
Query: 552 GGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSY 588
G +Y+G GGYSQ+ + + N S SY
Sbjct: 847 GSSYQGK-----QGGYSQSNYNSPGSGQNYSGPPSSY 878
>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
sapiens]
Length = 894
Score = 70.1 bits (170), Expect = 7e-12
Identities = 58/196 (29%), Positives = 76/196 (38%), Gaps = 25/196 (12%)
Query: 503 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSG----GGGNYRGG 558
PPP R RGG RGRG G GF G N GG+ N G G G GG + G
Sbjct: 635 PPPNLRGRGRGGS-IRGRGRGRGF--------GGANHGGYMNAGAGYGSYGYGGNSATAG 685
Query: 559 FNR-SGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSY 617
+++ GG+S N G S+ GSY + P PP +QP +
Sbjct: 686 YSQFYSNGGHSGNASGGGGGGGGGSSGYGSYYQGDNYNSP---VPPKHAGKKQP-----H 737
Query: 618 SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP 677
+ P S Y + G + + S+Y PPQ + QG YS + P
Sbjct: 738 GGQQKPSYGSGYQSHQ---GQQQSYNQSPYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPG 794
Query: 678 PPPPPAYNYGSYGGYN 693
YNY S Y+
Sbjct: 795 GGGGSDYNYESKFNYS 810
Score = 44.7 bits (104), Expect = 3e-04
Identities = 50/207 (24%), Positives = 62/207 (29%), Gaps = 77/207 (37%)
Query: 494 YNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQR------------YENRGPPGGNRGG 541
Y + + PP+ + GG + G G+Q Y N GPP G + G
Sbjct: 717 YQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSPYSNYGPPQGKQKG 776
Query: 542 FQNR-------------GGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSY 588
+ + GGG G NY FN SG GG R NS G
Sbjct: 777 YNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGG----------RSGGNSYGSGG- 825
Query: 589 NRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVS 648
SY+P + G S S
Sbjct: 826 --------------------------ASYNP----------GSHGGYGGGSGGGS----- 844
Query: 649 SYSPPQPSYSQPPYNQGGYSQGYTAPP 675
SY Q YSQ YN G Q Y+ PP
Sbjct: 845 SYQGKQGGYSQSNYNSPGSGQNYSGPP 871
Score = 44.7 bits (104), Expect = 3e-04
Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 494 YNEEGRKAGPPP--EKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGG 551
YN G G E +F+ G GG R GG + G N G GGGSGG
Sbjct: 790 YNSPGGGGGSDYNYESKFNYSGSGG---RSGGNSY----GSGGASYNPGSHGGYGGGSGG 842
Query: 552 GGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSY 588
G +Y+G GGYSQ+ + + N S SY
Sbjct: 843 GSSYQGK-----QGGYSQSNYNSPGSGQNYSGPPSSY 874
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 69.3 bits (168), Expect = 1e-11
Identities = 52/147 (35%), Positives = 60/147 (40%), Gaps = 51/147 (34%)
Query: 596 PPPQ--QPPPPQPPPQQPPPPPS----------YSPARNPPGASTYNKNSNIPGSSANTS 643
PPP PPPP PP QPPPPPS P PP +S+ ++ +P T+
Sbjct: 472 PPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTT 531
Query: 644 TPT---------------VSSYSP------------PQPSYSQPPYNQGGYSQGYTAPPP 676
T T ++ SP P P QPP G APPP
Sbjct: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG-------APPP 584
Query: 677 PPPPPPAYNYGSYGGYNPAPYTPPPPP 703
PPPPPP GS G AP PPPPP
Sbjct: 585 PPPPPP----GS-AGMMYAPPPPPPPP 606
Score = 58.5 bits (140), Expect = 2e-08
Identities = 59/210 (28%), Positives = 71/210 (33%), Gaps = 47/210 (22%)
Query: 534 PPGGNRGGFQNR------GGGSGGGGNYRGGFNR---SGGGGYSQNRWGNNNRDNNNSNN 584
PP N G ++R GGG GG G F S GG+ + +N
Sbjct: 366 PPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN--------- 416
Query: 585 RGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSP-------ARNPPGASTYNKNSNIPG 637
P PPP PPP P Q P PP + P P G+ Y + G
Sbjct: 417 -------PNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQ---G 466
Query: 638 SSANTSTPTVSSYSPPQPSYSQPPYNQGG----YSQGYTAPPPPPPPPPAYNYGSYGGYN 693
P PP P QPP G + Q PPPPPPP S
Sbjct: 467 KGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS-----SSMASST 521
Query: 694 PAPY---TPPPPPTAQTYPQPSYNQYQQYA 720
P P+ T +A T P + Q Q A
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAA 551
Score = 48.9 bits (115), Expect = 2e-05
Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 29/164 (17%)
Query: 591 APQQQPPPQQPPPPQ--PPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANT------ 642
AP+ P PPPP Q PP + P+ + P + PG ++
Sbjct: 343 APRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLP 402
Query: 643 -------STPTVSSYSPPQPSYSQPP---YNQGGYSQGYTAPPP-------PPPPPPAYN 685
P + + P P + QPP NQG + G+ PPP P Y
Sbjct: 403 SLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYR 462
Query: 686 YGSYGGYNPAP----YTPPPPPTAQTYPQPSYNQYQQYAQQWNQ 725
G P P PPPPP + P P + QQ Q
Sbjct: 463 LHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQ 506
Score = 45.4 bits (106), Expect = 2e-04
Identities = 45/168 (26%), Positives = 59/168 (35%), Gaps = 42/168 (25%)
Query: 597 PPQQPPPPQPPPQQPPPPP--SYSPARNP----------------------PGASTYNKN 632
P P P P PPPP S + +R P PG ++
Sbjct: 339 PLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFP 398
Query: 633 SNIPG-SSANTSTPTVSSYSPPQPSYSQ---PPYNQGGYSQGYTAPPP-------PPPPP 681
+P + + P + + P P + Q PP NQG + G+ PPP P
Sbjct: 399 HPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGS 458
Query: 682 PAYNYGSYGGYNPAP-----YTPPPPPTAQTYPQPS--YNQYQQYAQQ 722
Y G P P PPPPP+ Q P PS +QQ QQ
Sbjct: 459 GVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQ 506
Score = 45.4 bits (106), Expect = 2e-04
Identities = 38/125 (30%), Positives = 39/125 (31%), Gaps = 21/125 (16%)
Query: 572 WGNNNRDNNNSNNRGSYNRAPQQQP--------PPQQPPP---PQPPPQQPPPPPSYSPA 620
W N S GS QQQ P Q P P PP QPP PP P
Sbjct: 525 WQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPP 584
Query: 621 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP 680
PP PGS+ P P PS G PP PPP
Sbjct: 585 PPPPP----------PGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP 634
Query: 681 PPAYN 685
PP N
Sbjct: 635 PPPQN 639
Score = 40.4 bits (93), Expect = 0.006
Identities = 44/154 (28%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 604 PQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYN 663
P P P P+ +PA NPP S + + P P ++S PS S+P +
Sbjct: 335 PATTPLASAPRPA-APANNPPPPSLMSTTQSRP--------PWMNS----GPSESRPYHG 381
Query: 664 QGGYSQGYTAPPPPPPPPPAYNY-GSYGGYNPAPYTP--PPPPTAQTYPQPSYNQYQQYA 720
G G P P P + G +GG+ P + P PPPP Q P P
Sbjct: 382 MHGGGPGGPGGGPHSFPHPLPSLTGGHGGH-PMQHNPNGPPPPWMQPPPPP--------- 431
Query: 721 QQWNQYYQNQGQWPP-YYGNYDYGSYSGNTQGGT 753
NQG PP ++G Y G+T G+
Sbjct: 432 -------MNQGPHPPGHHGPPPMDQYLGSTPVGS 458
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 68.9 bits (167), Expect = 2e-11
Identities = 65/231 (28%), Positives = 82/231 (35%), Gaps = 28/231 (12%)
Query: 498 GRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRG 557
G+ GPPP+ G + R + + P GGN+ G G +G
Sbjct: 96 GKPQGPPPQ---------GDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 146
Query: 558 GFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPP-----PQQPPPPQPPPQQPP 612
G N+ G G + +N S + S PQ PP PQ PPPP PQ PP
Sbjct: 147 G-NKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 205
Query: 613 ---------PPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSY---SPPQPSYSQP 660
PPP P PP ++++ P P + PP P Q
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 265
Query: 661 PYNQGGYS-QGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQ 710
P QGG QG P P PPP S +P PPP PQ
Sbjct: 266 PPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQ 316
Score = 64.7 bits (156), Expect = 3e-10
Identities = 70/242 (28%), Positives = 89/242 (36%), Gaps = 35/242 (14%)
Query: 481 ELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRG 540
++ +EE+ L+ G G PP+ GG + +G + + P GGN+
Sbjct: 22 DVSQEESPSLIA-----GNPQGAPPQ--------GGNKPQGPPSPPGKPQGPPPQGGNQP 68
Query: 541 GFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPP--- 597
G G +GG N+ G G + + + + R + PQ PP
Sbjct: 69 QGPPPPPGKPQGPPPQGG-NKPQGPPPPGKPQGPPPQGDKSRSPRSPPGK-PQGPPPQGG 126
Query: 598 --PQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQP 655
PQ PPPP PQ PPP P PP K P N S SS SPP
Sbjct: 127 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG----KPQGPPPQGDNKSR---SSRSPPGK 179
Query: 656 SYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 715
PP QGG P PPPPP G P PPPP Q P N+
Sbjct: 180 PQGPPP--QGGNQ------PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 231
Query: 716 YQ 717
Q
Sbjct: 232 SQ 233
Score = 58.9 bits (141), Expect = 2e-08
Identities = 68/231 (29%), Positives = 83/231 (35%), Gaps = 41/231 (17%)
Query: 498 GRKAGPPPEKRFDNRGG---GGFRGRGGGGGFQRYENRGPPGGNRG-----GFQNRGG-- 547
G+ GPPP+ +G G +G G + R PPG +G G Q +G
Sbjct: 199 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP 258
Query: 548 --GSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPP-----PQQ 600
G G +GG N+ G G + + S + S PQ PP PQ
Sbjct: 259 PPGKPQGPPPQGG-NKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQG 317
Query: 601 PPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQP 660
PPPP PQ PPP P PP K P + S S PQ P
Sbjct: 318 PPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGGSKSRSARSPPGKPQ----GP 369
Query: 661 PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQP 711
P +G QG PPPPA G NP PP Q P+P
Sbjct: 370 PQQEGNNPQG--------PPPPA-------GGNPQQPQAPPAGQPQGPPRP 405
Score = 57.8 bits (138), Expect = 4e-08
Identities = 51/164 (31%), Positives = 57/164 (34%), Gaps = 34/164 (20%)
Query: 574 NNNRDNNNSNNRGSYNRAPQQQPP-----PQQPPPPQ-----PPPQ-----QPPPPPSYS 618
N N D + + PQ PP PQ PP P PPPQ Q PPPP
Sbjct: 18 NLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGK 77
Query: 619 PARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP- 677
P PP + PG PPQ S+ P + G QG PPP
Sbjct: 78 PQGPPPQGGNKPQGPPPPGKPQG---------PPPQGDKSRSPRSPPGKPQG---PPPQG 125
Query: 678 ------PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 715
PPPPP G P PPPP Q P N+
Sbjct: 126 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 169
Score = 40.0 bits (92), Expect = 0.008
Identities = 46/158 (29%), Positives = 58/158 (36%), Gaps = 34/158 (21%)
Query: 498 GRKAGPPPEKRFDNRGG---GGFRGRGGGGGFQRYENRGPPGGNRG-----GFQNRG--- 546
G+ GPPP+ +G G +G GG + +R PPG +G G Q +G
Sbjct: 261 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPP 320
Query: 547 ------GGSGGGGNYRGGFNRSG--------GGGYSQNRWGNNNRDNNNSNNRGSYNRAP 592
G GGN G G GG S++ + G+ P
Sbjct: 321 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN---P 377
Query: 593 QQQPPP-----QQPP-PPQPPPQQPPPPPSYSPARNPP 624
Q PPP QQP PP PQ PP PP PP
Sbjct: 378 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 68.9 bits (167), Expect = 2e-11
Identities = 62/170 (36%), Positives = 64/170 (37%), Gaps = 39/170 (22%)
Query: 578 DNNNSNNRGSYNRAPQQQPPPQ-QPPPPQPPPQQPPPPPS-YSPARNPPGASTYNKNSNI 635
DN N G Y PQ PP QPP P P QPP PS Y P G S Y
Sbjct: 12 DNYPPPNPG-YPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPY------ 64
Query: 636 PGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSY--GGYN 693
PQ Y Q PY QGGY QG P P Y G Y GGY
Sbjct: 65 -----------------PQGGYPQGPYPQGGYPQG-------PYPQEGYPQGPYPQGGYP 100
Query: 694 PAPYTPPP-PPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDY 742
PY P PP PQ Q Q N YQ +G P YY N D+
Sbjct: 101 QGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGN--YQEEGP-PSYYDNQDF 147
Score = 31.2 bits (69), Expect = 3.7
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 11/75 (14%)
Query: 678 PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYY 737
PPP P GY P P PP YP Y Q + Q G P
Sbjct: 15 PPPNP--------GYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQ 66
Query: 738 GNYDYGSYSGNTQGG 752
G Y G Y QGG
Sbjct: 67 GGYPQGPY---PQGG 78
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 68.9 bits (167), Expect = 2e-11
Identities = 62/170 (36%), Positives = 64/170 (37%), Gaps = 39/170 (22%)
Query: 578 DNNNSNNRGSYNRAPQQQPPPQ-QPPPPQPPPQQPPPPPS-YSPARNPPGASTYNKNSNI 635
DN N G Y PQ PP QPP P P QPP PS Y P G S Y
Sbjct: 12 DNYPPPNPG-YPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPY------ 64
Query: 636 PGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSY--GGYN 693
PQ Y Q PY QGGY QG P P Y G Y GGY
Sbjct: 65 -----------------PQGGYPQGPYPQGGYPQG-------PYPQEGYPQGPYPQGGYP 100
Query: 694 PAPYTPPP-PPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDY 742
PY P PP PQ Q Q N YQ +G P YY N D+
Sbjct: 101 QGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGN--YQEEGP-PSYYDNQDF 147
Score = 31.2 bits (69), Expect = 3.7
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 11/75 (14%)
Query: 678 PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYY 737
PPP P GY P P PP YP Y Q + Q G P
Sbjct: 15 PPPNP--------GYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQ 66
Query: 738 GNYDYGSYSGNTQGG 752
G Y G Y QGG
Sbjct: 67 GGYPQGPY---PQGG 78
>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
B1 [Homo sapiens]
Length = 353
Score = 67.8 bits (164), Expect = 4e-11
Identities = 40/101 (39%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 498 GRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGG-GGNYR 556
G GP P F G GRG G G+ Y GP GGN GG GGG GG GG
Sbjct: 216 GGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGY-GGGPGGGNFGGSPGYGGGRGGYGGGGP 274
Query: 557 GGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPP 597
G N+ GG G + +G N + N N+ G+YN+ P P
Sbjct: 275 GYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGP 315
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/63 (44%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 509 FDNRGGGGFRGRGGGGGFQRYE----NRGP-PGGNRGGFQNRGGGSGGGGNYRGGFNRSG 563
+DN GGG + G G F Y N GP GN GG +N GG GGG GG SG
Sbjct: 287 YDNYGGGNY-GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSG 345
Query: 564 GGG 566
G G
Sbjct: 346 GYG 348
Score = 31.6 bits (70), Expect = 2.8
Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 31/104 (29%)
Query: 498 GRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGG--------- 548
G GP + G GG RG GGGG Y N+G GG GG+ N GGG
Sbjct: 246 GYGGGPGGGNFGGSPGYGGGRGGYGGGG-PGYGNQG--GGYGGGYDNYGGGNYGSGNYND 302
Query: 549 ---------------SG--GGGNYRGGFNRSGGGGYSQNRWGNN 575
SG GG GG GGG Y G +
Sbjct: 303 FGNYNQQPSNYGPMKSGNFGGSRNMGG--PYGGGNYGPGGSGGS 344
>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
[Homo sapiens]
Length = 341
Score = 67.8 bits (164), Expect = 4e-11
Identities = 40/101 (39%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 498 GRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGG-GGNYR 556
G GP P F G GRG G G+ Y GP GGN GG GGG GG GG
Sbjct: 204 GGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGY-GGGPGGGNFGGSPGYGGGRGGYGGGGP 262
Query: 557 GGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPP 597
G N+ GG G + +G N + N N+ G+YN+ P P
Sbjct: 263 GYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGP 303
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/63 (44%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 509 FDNRGGGGFRGRGGGGGFQRYE----NRGP-PGGNRGGFQNRGGGSGGGGNYRGGFNRSG 563
+DN GGG + G G F Y N GP GN GG +N GG GGG GG SG
Sbjct: 275 YDNYGGGNY-GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSG 333
Query: 564 GGG 566
G G
Sbjct: 334 GYG 336
Score = 31.6 bits (70), Expect = 2.8
Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 31/104 (29%)
Query: 498 GRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGG--------- 548
G GP + G GG RG GGGG Y N+G GG GG+ N GGG
Sbjct: 234 GYGGGPGGGNFGGSPGYGGGRGGYGGGG-PGYGNQG--GGYGGGYDNYGGGNYGSGNYND 290
Query: 549 ---------------SG--GGGNYRGGFNRSGGGGYSQNRWGNN 575
SG GG GG GGG Y G +
Sbjct: 291 FGNYNQQPSNYGPMKSGNFGGSRNMGG--PYGGGNYGPGGSGGS 332
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 67.0 bits (162), Expect = 6e-11
Identities = 44/125 (35%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 594 QQPPPQQPPP---PQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSY 650
Q PPP P P P P P +PPPPP S S+Y + T SY
Sbjct: 400 QIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEG-PSY 458
Query: 651 SPPQPSYSQP---PYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQ- 706
P+Y P PY+ Y PPPPP PPP ++ P P PPPPPT
Sbjct: 459 GALPPAYGPPAHLPYHPHVYPPN---PPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNP 515
Query: 707 TYPQP 711
+P P
Sbjct: 516 NFPPP 520
Score = 58.5 bits (140), Expect = 2e-08
Identities = 42/115 (36%), Positives = 47/115 (40%), Gaps = 32/115 (27%)
Query: 592 PQQQPPPQQPPPPQ--PPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSS 649
P PPP PPPP PPP PPP P Y PP TYN N P
Sbjct: 479 PPNPPPPPVPPPPASFPPPAIPPPTPGY-----PPPPPTYNPNFPPP------------- 520
Query: 650 YSPPQ--PSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPP 702
PP+ P+++ PP+ G PP PPPA GG P P PPP
Sbjct: 521 --PPRLPPTHAVPPHPPPGLGL-----PPASYPPPAV---PPGGQPPVPPPIPPP 565
Score = 54.7 bits (130), Expect = 3e-07
Identities = 47/167 (28%), Positives = 58/167 (34%), Gaps = 22/167 (13%)
Query: 592 PQQQPPPQQPPPPQPPPQQP--PPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSS 649
PQQ+ P QQP Q P QQP P P SP + K N P + +
Sbjct: 302 PQQKDP-QQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIET 360
Query: 650 YSPPQPSYSQPPYNQGGYSQGYTAPPPPPP-----------PPPAYNYGSYGGYNPAPYT 698
PP P PP + + PP P PPPA+ + P P+
Sbjct: 361 THPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQP-PPLPHR 419
Query: 699 PPPPPTAQ-------TYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYG 738
PPPPP + T S YQ + G PP YG
Sbjct: 420 PPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYG 466
Score = 52.4 bits (124), Expect = 2e-06
Identities = 44/164 (26%), Positives = 61/164 (37%), Gaps = 50/164 (30%)
Query: 591 APQQQPPPQQPPPPQPPPQQ---PPPPPSYSPA-RNPPGASTYNKNSNIPGSSANTSTPT 646
+P+++ +PPPP+ P + PP PP++ P R PP A+ + + PG T P
Sbjct: 340 SPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGE-AEPPGPVDATDLPK 398
Query: 647 VSSYSP--PQPSYSQPPYNQGGYSQGYTAPPPPPPP------------------------ 680
V P P P + PP PPPPPP
Sbjct: 399 VQIPPPAHPAPVHQPPPLPH--------RPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSM 450
Query: 681 -----------PPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSY 713
PPAY ++ Y+P Y P PPP P S+
Sbjct: 451 MKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASF 494
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 66.6 bits (161), Expect = 8e-11
Identities = 37/109 (33%), Positives = 45/109 (41%)
Query: 595 QPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ 654
QPPP PPPP PPP PPPPP P P + K S T+TP + + +
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLE 2463
Query: 655 PSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPP 703
+ TAPPP PP P + G + P P PP P
Sbjct: 2464 TTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAP 2512
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 20/130 (15%)
Query: 590 RAPQQQPPPQQPPPPQPPPQQPPP--PPSYSPARNPPGASTYNKNSNIPGSSANTSTPTV 647
+ P Q P P +PPP QP P +PPP P S P PG+ + P
Sbjct: 468 KPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS-----------TKPPPQQPGP 516
Query: 648 SSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP------PPAYNYGSYGGYNPAPYTP-P 700
+ SP QP ++PP Q G ++ P P P P GS P +P
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSA 576
Query: 701 PPPTAQTYPQ 710
P +Q P+
Sbjct: 577 KQPPSQGLPK 586
Score = 50.8 bits (120), Expect = 5e-06
Identities = 45/172 (26%), Positives = 63/172 (36%), Gaps = 26/172 (15%)
Query: 590 RAPQQQPPPQQPP-----PPQPPPQQP---PPPPSYSPARNP---PGASTYNKNSNIPGS 638
+ P QQP P +PP P+P QQP P + P + P PG PG
Sbjct: 399 KTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGK 458
Query: 639 SANTST---------PTVSSYSPPQPSYSQPPYNQGGYSQ------GYTAPPPPPPPPPA 683
++ T P + P QP ++PP Q G ++ G T PPP P P
Sbjct: 459 TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAK 518
Query: 684 YNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPP 735
+ G P P + P P+ QQ + +Q + PP
Sbjct: 519 PSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
Score = 45.4 bits (106), Expect = 2e-04
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 636 PGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPA 695
P S + +P+VSS P+ +P + PPPPPPPPP P
Sbjct: 2372 PASQLPSGSPSVSSL----PAKPRPFFRSSSLDISAQPPPPPPPPPPP--------PPPP 2419
Query: 696 PYTPPPPPTAQTYPQPS 712
P PPPP T P+P+
Sbjct: 2420 PPPPPPPLPPPTSPKPT 2436
Score = 43.5 bits (101), Expect = 7e-04
Identities = 33/130 (25%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 586 GSYNRAPQQQP------PPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSS 639
G+ QQP PP P Q P Q P + P + + + G S
Sbjct: 234 GTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGES 293
Query: 640 ANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTP 699
S P+ S QP+ +PP Q G+ + P PP P P P
Sbjct: 294 VKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPL--AQQPGTVKP 351
Query: 700 PPPPTAQTYP 709
P P T P
Sbjct: 352 PVQPPGTTKP 361
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 16/128 (12%)
Query: 592 PQQQPPPQQPPPPQPPPQQPP------PPPSYSPARNPPGASTYNKNSNIPGSSANTSTP 645
P PP Q P P PP Q P P P+ PA+ P G + + PG+ P
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQ-PSGLT--KPLAQQPGTVKPPVQP 355
Query: 646 TVSSYSPPQP-SYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPP---- 700
++ P QP ++PP Q G + + P P G P P PP
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQV 415
Query: 701 --PPPTAQ 706
P P AQ
Sbjct: 416 GTPKPLAQ 423
Score = 41.6 bits (96), Expect = 0.003
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 17/132 (12%)
Query: 593 QQQPP---PQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSS 649
QQQPP P+Q P + P QQ P S S ++ P + + P + T +
Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSIS-SQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270
Query: 650 YSPPQPSYSQPPYNQGGYSQGYTAPP------------PPPPPPPAYNYGSYGGYNPAPY 697
P Q S+P Q +G + P P P PPA G + P P
Sbjct: 271 KLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPG-HEKSQPGPA 329
Query: 698 TPPPPPTAQTYP 709
PP P+ T P
Sbjct: 330 KPPAQPSGLTKP 341
Score = 38.9 bits (89), Expect = 0.018
Identities = 36/130 (27%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 595 QPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNI---PGSSANTSTPTVSSYS 651
+PP Q P +PP QQ S P+ PG + + P + P
Sbjct: 360 KPPAQPLGPAKPPAQQ---TGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 652 PPQPSYSQPPYNQGGYSQGYTAPPPPPPPP---PAYNYGSYGGYNPAPYTPPPPPTAQTY 708
P+P QP + G T P P P PA G G A T P P +Q
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGP--GKTSAQQTGPTKPPSQ-L 473
Query: 709 PQPSYNQYQQ 718
P P+ QQ
Sbjct: 474 PGPAKPPPQQ 483
Score = 38.1 bits (87), Expect = 0.030
Identities = 41/151 (27%), Positives = 52/151 (34%), Gaps = 38/151 (25%)
Query: 590 RAPQQQPPPQQPPPPQPPPQQPPPPPSY--SPARNPPGA-------STYNKNSNIPGSSA 640
+ P QQ ++P QP P+ PP +PA+ P A T + PG +
Sbjct: 370 KPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQS 429
Query: 641 NTSTPTVSSYSPPQPSYSQPPYNQGG------YSQGYTAPPP----PPPPPPAYNYGSYG 690
P + QP + P Q G G T PP P PPP
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP-------- 481
Query: 691 GYNPAPYTPPP-------PPTAQ---TYPQP 711
P P PPP PP+ Q T P P
Sbjct: 482 -QQPGPAKPPPQQPGSAKPPSQQPGSTKPPP 511
Score = 36.6 bits (83), Expect = 0.089
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 591 APQQQPPPQQPPPPQ----------------PPPQQPPPPPSYSPARNPPGASTYNKNSN 634
A Q P PQQ P PQ P Q P + + GAS +++ SN
Sbjct: 885 AGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASN 944
Query: 635 IPGSSANTSTPTVSSYSPPQ---PSYSQPPYNQGGYSQGYTAPPPPPPPPP 682
+ ++ + S P P+ SQPP +QG APP P P
Sbjct: 945 LISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIP 995
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 591 APQQQPPPQQ-----PPPPQPPPQQPPPPPSYSP---ARNPPGASTYNKNS--NIPGSSA 640
+P++ P+Q P P +PPP P SP A+ PP A + +K + P +
Sbjct: 683 SPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPS 742
Query: 641 NTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP 677
V+ P QP +P + S T P P
Sbjct: 743 EQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIP 779
Score = 32.0 bits (71), Expect = 2.2
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 639 SANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYT 698
+A +T + S S PQP + P Q + P P PPP + G A
Sbjct: 663 TAPVTTTSAVSKSSPQPQQTSPK-KDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAK 721
Query: 699 PPPPPTAQTYPQP 711
PP + + P P
Sbjct: 722 QPPEADSLSKPAP 734
Score = 30.4 bits (67), Expect = 6.3
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 593 QQQPPPQQPPPPQPPP----QQPPPPPSYSPARNPPGASTYNK 631
+Q P P QPP Q PP Q PP P P + A K
Sbjct: 965 KQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEK 1007
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 66.6 bits (161), Expect = 8e-11
Identities = 37/109 (33%), Positives = 45/109 (41%)
Query: 595 QPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ 654
QPPP PPPP PPP PPPPP P P + K S T+TP + + +
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLE 2463
Query: 655 PSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPP 703
+ TAPPP PP P + G + P P PP P
Sbjct: 2464 TTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAP 2512
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 20/130 (15%)
Query: 590 RAPQQQPPPQQPPPPQPPPQQPPP--PPSYSPARNPPGASTYNKNSNIPGSSANTSTPTV 647
+ P Q P P +PPP QP P +PPP P S P PG+ + P
Sbjct: 468 KPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS-----------TKPPPQQPGP 516
Query: 648 SSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPP------PPAYNYGSYGGYNPAPYTP-P 700
+ SP QP ++PP Q G ++ P P P P GS P +P
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSA 576
Query: 701 PPPTAQTYPQ 710
P +Q P+
Sbjct: 577 KQPPSQGLPK 586
Score = 50.8 bits (120), Expect = 5e-06
Identities = 45/172 (26%), Positives = 63/172 (36%), Gaps = 26/172 (15%)
Query: 590 RAPQQQPPPQQPP-----PPQPPPQQP---PPPPSYSPARNP---PGASTYNKNSNIPGS 638
+ P QQP P +PP P+P QQP P + P + P PG PG
Sbjct: 399 KTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGK 458
Query: 639 SANTST---------PTVSSYSPPQPSYSQPPYNQGGYSQ------GYTAPPPPPPPPPA 683
++ T P + P QP ++PP Q G ++ G T PPP P P
Sbjct: 459 TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAK 518
Query: 684 YNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPP 735
+ G P P + P P+ QQ + +Q + PP
Sbjct: 519 PSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
Score = 45.4 bits (106), Expect = 2e-04
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 636 PGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPA 695
P S + +P+VSS P+ +P + PPPPPPPPP P
Sbjct: 2372 PASQLPSGSPSVSSL----PAKPRPFFRSSSLDISAQPPPPPPPPPPP--------PPPP 2419
Query: 696 PYTPPPPPTAQTYPQPS 712
P PPPP T P+P+
Sbjct: 2420 PPPPPPPLPPPTSPKPT 2436
Score = 43.5 bits (101), Expect = 7e-04
Identities = 33/130 (25%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 586 GSYNRAPQQQP------PPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSS 639
G+ QQP PP P Q P Q P + P + + + G S
Sbjct: 234 GTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGES 293
Query: 640 ANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTP 699
S P+ S QP+ +PP Q G+ + P PP P P P
Sbjct: 294 VKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPL--AQQPGTVKP 351
Query: 700 PPPPTAQTYP 709
P P T P
Sbjct: 352 PVQPPGTTKP 361
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 16/128 (12%)
Query: 592 PQQQPPPQQPPPPQPPPQQPP------PPPSYSPARNPPGASTYNKNSNIPGSSANTSTP 645
P PP Q P P PP Q P P P+ PA+ P G + + PG+ P
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQ-PSGLT--KPLAQQPGTVKPPVQP 355
Query: 646 TVSSYSPPQP-SYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPP---- 700
++ P QP ++PP Q G + + P P G P P PP
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQV 415
Query: 701 --PPPTAQ 706
P P AQ
Sbjct: 416 GTPKPLAQ 423
Score = 41.6 bits (96), Expect = 0.003
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 17/132 (12%)
Query: 593 QQQPP---PQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSS 649
QQQPP P+Q P + P QQ P S S ++ P + + P + T +
Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSIS-SQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270
Query: 650 YSPPQPSYSQPPYNQGGYSQGYTAPP------------PPPPPPPAYNYGSYGGYNPAPY 697
P Q S+P Q +G + P P P PPA G + P P
Sbjct: 271 KLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPG-HEKSQPGPA 329
Query: 698 TPPPPPTAQTYP 709
PP P+ T P
Sbjct: 330 KPPAQPSGLTKP 341
Score = 38.9 bits (89), Expect = 0.018
Identities = 36/130 (27%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 595 QPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNI---PGSSANTSTPTVSSYS 651
+PP Q P +PP QQ S P+ PG + + P + P
Sbjct: 360 KPPAQPLGPAKPPAQQ---TGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 652 PPQPSYSQPPYNQGGYSQGYTAPPPPPPPP---PAYNYGSYGGYNPAPYTPPPPPTAQTY 708
P+P QP + G T P P P PA G G A T P P +Q
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGP--GKTSAQQTGPTKPPSQ-L 473
Query: 709 PQPSYNQYQQ 718
P P+ QQ
Sbjct: 474 PGPAKPPPQQ 483
Score = 38.1 bits (87), Expect = 0.030
Identities = 41/151 (27%), Positives = 52/151 (34%), Gaps = 38/151 (25%)
Query: 590 RAPQQQPPPQQPPPPQPPPQQPPPPPSY--SPARNPPGA-------STYNKNSNIPGSSA 640
+ P QQ ++P QP P+ PP +PA+ P A T + PG +
Sbjct: 370 KPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQS 429
Query: 641 NTSTPTVSSYSPPQPSYSQPPYNQGG------YSQGYTAPPP----PPPPPPAYNYGSYG 690
P + QP + P Q G G T PP P PPP
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP-------- 481
Query: 691 GYNPAPYTPPP-------PPTAQ---TYPQP 711
P P PPP PP+ Q T P P
Sbjct: 482 -QQPGPAKPPPQQPGSAKPPSQQPGSTKPPP 511
Score = 36.6 bits (83), Expect = 0.089
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 591 APQQQPPPQQPPPPQ----------------PPPQQPPPPPSYSPARNPPGASTYNKNSN 634
A Q P PQQ P PQ P Q P + + GAS +++ SN
Sbjct: 885 AGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASN 944
Query: 635 IPGSSANTSTPTVSSYSPPQ---PSYSQPPYNQGGYSQGYTAPPPPPPPPP 682
+ ++ + S P P+ SQPP +QG APP P P
Sbjct: 945 LISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIP 995
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 591 APQQQPPPQQ-----PPPPQPPPQQPPPPPSYSP---ARNPPGASTYNKNS--NIPGSSA 640
+P++ P+Q P P +PPP P SP A+ PP A + +K + P +
Sbjct: 683 SPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPS 742
Query: 641 NTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP 677
V+ P QP +P + S T P P
Sbjct: 743 EQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIP 779
Score = 32.0 bits (71), Expect = 2.2
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 639 SANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYT 698
+A +T + S S PQP + P Q + P P PPP + G A
Sbjct: 663 TAPVTTTSAVSKSSPQPQQTSPK-KDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAK 721
Query: 699 PPPPPTAQTYPQP 711
PP + + P P
Sbjct: 722 QPPEADSLSKPAP 734
Score = 30.4 bits (67), Expect = 6.3
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 593 QQQPPPQQPPPPQPPP----QQPPPPPSYSPARNPPGASTYNK 631
+Q P P QPP Q PP Q PP P P + A K
Sbjct: 965 KQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEK 1007
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 66.2 bits (160), Expect = 1e-10
Identities = 63/211 (29%), Positives = 78/211 (36%), Gaps = 29/211 (13%)
Query: 530 ENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYN 589
E R P GGN+ G G +GG G G + N S +
Sbjct: 37 EGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHP 96
Query: 590 RAPQQQPPPQ-------QPPPP----QPPPQ------QPPPPPSYSPARNPPGASTYNKN 632
P++ PPPQ PPPP +PPPQ +PPPPP P R PP N++
Sbjct: 97 GKPER-PPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPG-KPERPPPQGG--NQS 152
Query: 633 SNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPP------PPPAYNY 686
P P + + + S P QG Q P PPP PPPA
Sbjct: 153 QGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGN 212
Query: 687 GSYGGYNPA--PYTPPPPPTAQTYPQPSYNQ 715
PA P PPPPP P+P+ Q
Sbjct: 213 PQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQ 243
Score = 64.7 bits (156), Expect = 3e-10
Identities = 53/163 (32%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 590 RAPQQQPPPQQPPPPQ-----PPPQ-----QPPPPPSYSPARNPPGASTYNKNSNIPGSS 639
R PQ PQ+PPPP PPPQ Q PPPP P PP N++ P
Sbjct: 39 RRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGG--NQSQGPPPHP 96
Query: 640 ANTSTP-----TVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP--PPPPPAYNYGSYGGY 692
P S +PP P + P QGG +Q + PPPP P PP G
Sbjct: 97 GKPERPPPQGGNQSQGTPPPPGKPERPPPQGG-NQSHRPPPPPGKPERPPPQGGNQSQGP 155
Query: 693 NPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPP 735
P P P PP + S Q Q N+ Q PP
Sbjct: 156 PPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPP 198
Score = 55.5 bits (132), Expect = 2e-07
Identities = 58/183 (31%), Positives = 65/183 (35%), Gaps = 45/183 (24%)
Query: 594 QQPPPQ-----QPPPPQP------PPQ-----QPPPPPSYSPARNPPGASTYNKNSNIPG 637
Q PPPQ Q PPP P PPQ Q PPP P R PP ++ + P
Sbjct: 58 QGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPP 117
Query: 638 SSANTSTPTVSSYS---PPQPSYSQPPYNQGG-YSQGYTAPPPPPP-----PPPAYNYGS 688
P + S PP P + P QGG SQG PPP P PPP S
Sbjct: 118 GKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQG----PPPHPGKPEGPPPQEGNKS 173
Query: 689 YGGYNP-------------APYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPP 735
+P P PPPP Q P N Q A + QG PP
Sbjct: 174 RSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAG---KPQGPPPP 230
Query: 736 YYG 738
G
Sbjct: 231 PQG 233
Score = 51.2 bits (121), Expect = 3e-06
Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 595 QPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYS--- 651
+P ++P P Q PPPP P PP ++ P P + S
Sbjct: 35 KPEGRRPQGGNQP--QRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGP 92
Query: 652 PPQPSYSQPPYNQGGYSQGYTAPPP--PPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYP 709
PP P + P QGG T PPP P PPP G N + PPPP + P
Sbjct: 93 PPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQ-------GGNQSHRPPPPPGKPERPP 145
Query: 710 QPSYNQYQ 717
NQ Q
Sbjct: 146 PQGGNQSQ 153
Score = 32.0 bits (71), Expect = 2.2
Identities = 46/192 (23%), Positives = 60/192 (31%), Gaps = 65/192 (33%)
Query: 498 GRKAGPPPEKRFDNRGG----GGFRGRGGGGGFQ---------RYENRGPPGGNRG---- 540
G+ GPPP+ ++G G GR GG Q + E P GGN+
Sbjct: 55 GKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTP 114
Query: 541 ---GFQNRGGGSGGGGNYR--------------GGFNRSGGGGYSQNRWGNNNRDNNNSN 583
G R GG ++R GG G + G ++ N S
Sbjct: 115 PPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSR 174
Query: 584 NRGSYNRAPQQQPP-----PQQPPPP--------------------------QPPPQQPP 612
+ S PQ P PQ PPPP PPP Q
Sbjct: 175 SARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGG 234
Query: 613 PPPSYSPARNPP 624
PP + + PP
Sbjct: 235 RPPRPAQGQQPP 246
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 65.5 bits (158), Expect = 2e-10
Identities = 46/132 (34%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 588 YNRAPQQQPPPQQPPPPQPPP---QQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTST 644
+ +A QQPPPQ PPP PPP Q PPPPP +P R PPG S G
Sbjct: 371 FTQAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLA 430
Query: 645 PTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPT 704
TV S P PP N G S G P Y + G +PA +P P +
Sbjct: 431 VTVPSSLP-----QSPPENPGQPSMGIDI----ASAPALQQYRTSAG-SPANQSPTSPVS 480
Query: 705 AQTYPQPSYNQY 716
Q + S Q+
Sbjct: 481 NQGFSPGSSPQH 492
Score = 39.3 bits (90), Expect = 0.014
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 20/100 (20%)
Query: 615 PSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYS--------QPPYNQGG 666
P SP P G S + ++ A+ PT+S SP + + Q PY
Sbjct: 316 PGSSPQHRPAGVSPLSLSTEARRQQAS---PTLSPLSPITQAVAMDALSLEQQLPYAFFT 372
Query: 667 YSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQ 706
+ PP P PPPP PA PPPPP Q
Sbjct: 373 QAGSQQPPPQPQPPPPP---------PPASQQPPPPPPPQ 403
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 65.5 bits (158), Expect = 2e-10
Identities = 46/132 (34%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 588 YNRAPQQQPPPQQPPPPQPPP---QQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTST 644
+ +A QQPPPQ PPP PPP Q PPPPP +P R PPG S G
Sbjct: 355 FTQAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLA 414
Query: 645 PTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPT 704
TV S P PP N G S G P Y + G +PA +P P +
Sbjct: 415 VTVPSSLP-----QSPPENPGQPSMGIDI----ASAPALQQYRTSAG-SPANQSPTSPVS 464
Query: 705 AQTYPQPSYNQY 716
Q + S Q+
Sbjct: 465 NQGFSPGSSPQH 476
Score = 39.3 bits (90), Expect = 0.014
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 20/100 (20%)
Query: 615 PSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYS--------QPPYNQGG 666
P SP P G S + ++ A+ PT+S SP + + Q PY
Sbjct: 300 PGSSPQHRPAGVSPLSLSTEARRQQAS---PTLSPLSPITQAVAMDALSLEQQLPYAFFT 356
Query: 667 YSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQ 706
+ PP P PPPP PA PPPPP Q
Sbjct: 357 QAGSQQPPPQPQPPPPP---------PPASQQPPPPPPPQ 387
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 65.5 bits (158), Expect = 2e-10
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 606 PPPQQPPPPPSYSPARNP-PGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQ 664
PPP PPPPP P +P PG S+ S P + +++ + Q Q + +
Sbjct: 15 PPPPVPPPPPVALPEASPGPGYSS----STTPAAPSSSGFMSFREQHLAQLQQLQQMHQK 70
Query: 665 GGYS--QGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQ 722
Q + PPPP PPPP G YG + P P PPPP P SY + QQY
Sbjct: 71 QMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPG----PALSYQKQQQYK-- 124
Query: 723 WNQYYQNQGQWPP 735
+Q +Q PP
Sbjct: 125 -HQMLHHQRDGPP 136
Score = 64.7 bits (156), Expect = 3e-10
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 36/160 (22%)
Query: 592 PQQQPPPQQPPPP----------QPPPQQPPPPP----SYSPARNPPGASTYNKNSNIPG 637
P PPP PPPP QPPP PPPP SY + +++ PG
Sbjct: 78 PHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPG 137
Query: 638 SSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPY 697
+ SPP+ PP G Y + PPP PPP+Y Y + PY
Sbjct: 138 ------LVPMELESPPE----SPPVPPGSYMPPSQSYMPPPQPPPSY----YPPTSSQPY 183
Query: 698 TPPPPPT------AQTY--PQPSYNQYQQYAQQWNQYYQN 729
PP P+ +Q+Y P PSY+ +Q + + Q+
Sbjct: 184 LPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQS 223
Score = 57.8 bits (138), Expect = 4e-08
Identities = 50/167 (29%), Positives = 62/167 (37%), Gaps = 21/167 (12%)
Query: 575 NNRDNNNSNNRGSYNRAPQQQPPPQQPPP--PQPPPQQPP---------------PPPSY 617
N+ N + G+ + P P Q PPP PPP PP PPP
Sbjct: 501 NSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGM 560
Query: 618 SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPP 677
P PP T +P S ++ P V PP S + PP S TAPPP
Sbjct: 561 PPPVMPPSLPTSVPPPGMPPSLSSAGPPPV--LPPPSLSSAGPPPVLPPPSLSSTAPPPV 618
Query: 678 PPPPPAYNYGSYGGYNP--APYTPPPPPTAQTYPQPSYNQYQQYAQQ 722
P PP + G P P PP TA P S +Q Q ++
Sbjct: 619 MPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEK 665
Score = 57.0 bits (136), Expect = 6e-08
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 586 GSYNRAPQQQPPPQQPPPPQPPP--QQPPPPPSY-SPARNPPGASTYNKNSNIPGSSANT 642
GSY Q PP QPPP PP QP PP+ SP+++PP S + SS+++
Sbjct: 155 GSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSS 214
Query: 643 STPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPP 682
+ S S S + P G+S+ PPPP PP
Sbjct: 215 QSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPP 254
Score = 51.6 bits (122), Expect = 3e-06
Identities = 40/137 (29%), Positives = 54/137 (39%), Gaps = 12/137 (8%)
Query: 595 QPPPQQPPPP----QPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSY 650
+ PP+ PP P PP Q PPP P+ PP T ++ P + + +P SY
Sbjct: 144 ESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPP---TSSQPYLPPAQPSPSQSPPSQSY 200
Query: 651 SPPQPSYSQPPYNQGGY---SQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPP--PPTA 705
P PSYS + Y SQ Y P P+ + P P + PP T
Sbjct: 201 LAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTV 260
Query: 706 QTYPQPSYNQYQQYAQQ 722
Q P S + + QQ
Sbjct: 261 QQEPLESGAKNKSTEQQ 277
Score = 51.2 bits (121), Expect = 3e-06
Identities = 45/143 (31%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 592 PQQQPPPQQPPPPQPPP---QQPPP--PPSYS-----PARNPPGASTYNKNSNIPGSSAN 641
P PPP PPP PP PPP PPS S P PP S+ +P S +
Sbjct: 552 PATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLS 611
Query: 642 TSTPTVSSYSPPQPSYSQPP-YNQGGYSQGYTAPPP---PPPPPPAYNYGSYGGYNPAPY 697
++ P PP S + PP G QG PP P PP + + S P P
Sbjct: 612 STAPPPVMPLPPLSSATPPPGIPPPGVPQGI--PPQLTAAPVPPASSSQSSQVPEKPRPA 669
Query: 698 TPPPPPTAQTYPQPSYNQYQQYA 720
P P + + P +Y+ Q A
Sbjct: 670 LLPTPVSFGSAPPTTYHPPLQSA 692
Score = 49.3 bits (116), Expect = 1e-05
Identities = 43/165 (26%), Positives = 59/165 (35%), Gaps = 29/165 (17%)
Query: 592 PQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNS-------------NIPGS 638
P +PP PPPP PPP PPPPP P + ++++S N
Sbjct: 1538 PVTRPPVPIPPPPPPPP-LPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFK 1596
Query: 639 SANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYG-----SYGGYN 693
S + P+ PP S PP G G PPP +YG S
Sbjct: 1597 SETAAIPSAPVLPPPPVHSSIPP--PGPVPMGMPPMSKPPPVQQTVDYGHGRDISTNKVE 1654
Query: 694 PAPY------TPPPPPTAQTYPQPSYNQYQQYAQQWNQ--YYQNQ 730
PY P P P T+ Q +Y ++ ++ Y+ Q
Sbjct: 1655 QIPYGERITLRPDPLPERSTFETEHAGQRDRYDRERDREPYFDRQ 1699
Score = 48.9 bits (115), Expect = 2e-05
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 13/121 (10%)
Query: 596 PPPQQPPPP----QPPPQQPPP------PPSYSPARNPPGASTYNKNSNIPGSSANTSTP 645
PPP P PP PPP PPP PP + A PP +S +++S +P P
Sbjct: 615 PPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASS--SQSSQVPEKPRPALLP 672
Query: 646 TVSSYSPPQPSYSQPPYNQGGYSQGYTAPPP-PPPPPPAYNYGSYGGYNPAPYTPPPPPT 704
T S+ P+ PP G S+ + P P ++ S G + P P T
Sbjct: 673 TPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPIT 732
Query: 705 A 705
A
Sbjct: 733 A 733
Score = 37.4 bits (85), Expect = 0.052
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 660 PPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG-GYNPAPYTPPPPPTAQTYPQPSYNQYQQ 718
P + + G S Y PP PPPPP A S G GY+ + T P P++ + Q+
Sbjct: 3 PNWGRYGGSSHYPPPPVPPPPPVALPEASPGPGYSSS--TTPAAPSSSGF-MSFREQHLA 59
Query: 719 YAQQWNQYYQNQGQ 732
QQ Q +Q Q Q
Sbjct: 60 QLQQLQQMHQKQMQ 73
Score = 36.6 bits (83), Expect = 0.089
Identities = 45/195 (23%), Positives = 62/195 (31%), Gaps = 48/195 (24%)
Query: 579 NNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQP------PPPPSYSPARNPPGASTYNKN 632
+++S++ SY Q P Q P +P PPPPS PPG T +
Sbjct: 208 SSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSA-----PPGNKTTVQQ 262
Query: 633 SNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQ-------------------GGYSQGYTA 673
+ + N ST + P PS P Q G+ +G
Sbjct: 263 EPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVV 322
Query: 674 PPPPPPP------PPAYNYGSYGGYNPAPYTPP-----PPPTAQTYPQPS-------YNQ 715
P P PA + + P PP PPP PQ Q
Sbjct: 323 AKDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLKQ 382
Query: 716 YQQYAQQWNQYYQNQ 730
Q A W Q+ Q++
Sbjct: 383 LQAAAAHWQQHQQHR 397
Score = 35.4 bits (80), Expect = 0.20
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 502 GPPPEKRFDNRGGGGF-RGRG-----GGGGFQRYENRGPPGGNRGGFQ---NRGGGSGGG 552
GP + D R G RGRG G G ++ + R G R + NRG GS
Sbjct: 1022 GPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQEDFRDKMMGRREDSREKMNRGEGSRDR 1081
Query: 553 GNYRGGFNRS---GGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQ 609
G R G +R GG SQ+R +R+ GS R P ++ ++ PP+
Sbjct: 1082 GLVRPGSSREKVPGGLQGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGS 1141
Query: 610 QPPPPP 615
+ PP
Sbjct: 1142 RERGPP 1147
Score = 35.4 bits (80), Expect = 0.20
Identities = 32/117 (27%), Positives = 46/117 (39%), Gaps = 19/117 (16%)
Query: 643 STPTVSSYSPPQPSYSQPPYNQGGY--SQGYTAPPPP----------PPPPPAYNYGSYG 690
S P ++ + PPQ S Q ++ G G PPPP P PPA + S
Sbjct: 1481 SEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARS--SVP 1538
Query: 691 GYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSG 747
P PPPPP P P + Q A + ++ ++ +YG +D G
Sbjct: 1539 VTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDS-----FYGLWDTNDEQG 1590
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 65.1 bits (157), Expect = 2e-10
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 596 PPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSP--- 652
P P++ P P P PP S +PA PP Y+ +S+ +++++S+ + SS SP
Sbjct: 344 PGPEKGPTLAPSPHSLPPASSSAPA--PPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 653 --PQPSY-------------SQPP-YNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAP 696
PSY +QPP Y Q PPPPPP + +P P
Sbjct: 402 SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP 461
Query: 697 YTPPPPPTAQTYPQPS--YNQYQQYAQQWNQYYQNQGQWPPYYGNY---DYGSYSGNTQG 751
+ P + +P S ++ +QQ QQ Q Q Q Q ++GN G++ +G
Sbjct: 462 FPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 521
Query: 752 GTS 754
G+S
Sbjct: 522 GSS 524
Score = 57.0 bits (136), Expect = 6e-08
Identities = 50/189 (26%), Positives = 71/189 (37%), Gaps = 41/189 (21%)
Query: 574 NNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPP-------------------P 614
+++ ++++S ++GSY P P P Q P P P P P P
Sbjct: 569 SSSSNSSSSTSQGSY---PCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP 625
Query: 615 PSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ------PSY--SQPPYNQGG 666
Y A +PPG Y K + PG+ + P SPP P Y + PP G
Sbjct: 626 AGYKTA-SPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGT 684
Query: 667 YSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQY 726
+ G P P PP G + P PPPP + P S Q +Q + +Y
Sbjct: 685 FKPGSPTVGPGPLPP--------AGPSGLPSLPPPPAAPASGPPLSATQIKQ--EPAEEY 734
Query: 727 YQNQGQWPP 735
+ PP
Sbjct: 735 ETPESPVPP 743
Score = 47.0 bits (110), Expect = 7e-05
Identities = 45/151 (29%), Positives = 54/151 (35%), Gaps = 25/151 (16%)
Query: 587 SYNRAPQQQPPPQQPPPPQPPPQQPPPPP----SYSPA--RNPPGASTYNKNSNIPGSSA 640
S++ P P P PP PPP SYS A PP +S+ N +S+ S
Sbjct: 524 SHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSY 583
Query: 641 NTSTPTVSSYSPPQPSYSQPPYNQGGYSQ---------------GYTAPPPPPPPPPAYN 685
S P+ S P Y PP S GY PP PPP
Sbjct: 584 PCSHPSPSQ-GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKR 642
Query: 686 YGSYGGYN---PAPYTPPPPPTAQTYPQPSY 713
S G Y P Y P PP+ +T P Y
Sbjct: 643 APSPGAYKTATPPGYKPGSPPSFRTGTPPGY 673
Score = 46.6 bits (109), Expect = 9e-05
Identities = 48/161 (29%), Positives = 60/161 (37%), Gaps = 25/161 (15%)
Query: 593 QQQPPPQQPPPPQPPPQQPPPPPSYSPARNP-PGASTYNKNSNIPGSSANTSTPTVSSYS 651
QQQ QQ Q PPPP P +P G S+++ + S + P
Sbjct: 490 QQQQQQQQQQQQQHHGNSGPPPPGAFP--HPLEGGSSHHAHPYAMSPSLGSLRPY----- 542
Query: 652 PPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYN------YGSYGGYNP--------APY 697
PP P++ PP++Q YSQ A P PP + N GSY +P APY
Sbjct: 543 PPGPAHLPPPHSQVSYSQ---AGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY 599
Query: 698 TPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYG 738
PP PT T A Y PP YG
Sbjct: 600 PFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640
Score = 44.7 bits (104), Expect = 3e-04
Identities = 53/210 (25%), Positives = 74/210 (35%), Gaps = 42/210 (20%)
Query: 567 YSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQP---PPP-------QPPPQQPPPPPS 616
YS + + +++S++ S + P Q P P PPP QPP P PS
Sbjct: 375 YSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434
Query: 617 YSP-ARNPPGASTYNK---NSNIPGSSANTSTPTVSSYSPP-------------QPSYSQ 659
+ ++ PP Y + NSN ST S+ PP Q Q
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQ 494
Query: 660 PPYNQGGYSQGYTAPPPPPPPP---------PAYNY------GSYGGYNPAPYTPPPPPT 704
Q G + PPPP P A+ Y GS Y P P PPP +
Sbjct: 495 QQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHS 554
Query: 705 AQTYPQPSYNQYQQYAQQWNQYYQNQGQWP 734
+Y Q N + + +QG +P
Sbjct: 555 QVSYSQAGPNGPPVSSSSNSSSSTSQGSYP 584
Score = 44.3 bits (103), Expect = 4e-04
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 21/141 (14%)
Query: 580 NNSNNRGSYNRAPQQ--QPPPQQPPPPQPP---PQQP----PPPPSYSPA-----RNPPG 625
N+S++ ++ P + PPP PP PQPP P+QP P PS +P PP
Sbjct: 143 NDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPT 202
Query: 626 ASTYNKNSNIPGSSANT---STPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPP 682
+ + P T V S P P + GG + G PPP P
Sbjct: 203 SRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTP--- 259
Query: 683 AYNYGSYGGYNPAPYTPPPPP 703
+ S G P PP P
Sbjct: 260 -ISVSSSGASGAPPTKPPTTP 279
Score = 38.1 bits (87), Expect = 0.030
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 579 NNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGS 638
+N S + Y+ + Q P + PPP + P+ PP ++ ++
Sbjct: 127 DNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPH 186
Query: 639 SANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYT 698
+ T T + PP S+ + APP PPP P G GG P
Sbjct: 187 PSVTPTGYHAPMEPPT-------------SRMFQAPPGAPPPHPQLYPGGTGGVLSGPPM 233
Query: 699 PP 700
P
Sbjct: 234 GP 235
Score = 31.2 bits (69), Expect = 3.7
Identities = 37/133 (27%), Positives = 47/133 (35%), Gaps = 30/133 (22%)
Query: 529 YENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSY 588
Y+ PPG G + G+ G YRG +G G +
Sbjct: 649 YKTATPPGYKPGSPPSFRTGTPPG--YRGTSPPAGPGTFKPG------------------ 688
Query: 589 NRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVS 648
+P P P P P P PPPP + +PA PP ++T K P T V
Sbjct: 689 --SPTVGPGPLPPAGPSGLPSLPPPP-A-APASGPPLSATQIKQE--PAEEYETPESPV- 741
Query: 649 SYSPPQPSYSQPP 661
PP S S PP
Sbjct: 742 ---PPARSPSPPP 751
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 65.1 bits (157), Expect = 2e-10
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 596 PPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSP--- 652
P P++ P P P PP S +PA PP Y+ +S+ +++++S+ + SS SP
Sbjct: 344 PGPEKGPTLAPSPHSLPPASSSAPA--PPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 653 --PQPSY-------------SQPP-YNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAP 696
PSY +QPP Y Q PPPPPP + +P P
Sbjct: 402 SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP 461
Query: 697 YTPPPPPTAQTYPQPS--YNQYQQYAQQWNQYYQNQGQWPPYYGNY---DYGSYSGNTQG 751
+ P + +P S ++ +QQ QQ Q Q Q Q ++GN G++ +G
Sbjct: 462 FPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 521
Query: 752 GTS 754
G+S
Sbjct: 522 GSS 524
Score = 57.0 bits (136), Expect = 6e-08
Identities = 50/189 (26%), Positives = 71/189 (37%), Gaps = 41/189 (21%)
Query: 574 NNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPP-------------------P 614
+++ ++++S ++GSY P P P Q P P P P P P
Sbjct: 569 SSSSNSSSSTSQGSY---PCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP 625
Query: 615 PSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ------PSY--SQPPYNQGG 666
Y A +PPG Y K + PG+ + P SPP P Y + PP G
Sbjct: 626 AGYKTA-SPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGT 684
Query: 667 YSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQY 726
+ G P P PP G + P PPPP + P S Q +Q + +Y
Sbjct: 685 FKPGSPTVGPGPLPP--------AGPSGLPSLPPPPAAPASGPPLSATQIKQ--EPAEEY 734
Query: 727 YQNQGQWPP 735
+ PP
Sbjct: 735 ETPESPVPP 743
Score = 47.0 bits (110), Expect = 7e-05
Identities = 45/151 (29%), Positives = 54/151 (35%), Gaps = 25/151 (16%)
Query: 587 SYNRAPQQQPPPQQPPPPQPPPQQPPPPP----SYSPA--RNPPGASTYNKNSNIPGSSA 640
S++ P P P PP PPP SYS A PP +S+ N +S+ S
Sbjct: 524 SHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSY 583
Query: 641 NTSTPTVSSYSPPQPSYSQPPYNQGGYSQ---------------GYTAPPPPPPPPPAYN 685
S P+ S P Y PP S GY PP PPP
Sbjct: 584 PCSHPSPSQ-GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKR 642
Query: 686 YGSYGGYN---PAPYTPPPPPTAQTYPQPSY 713
S G Y P Y P PP+ +T P Y
Sbjct: 643 APSPGAYKTATPPGYKPGSPPSFRTGTPPGY 673
Score = 46.6 bits (109), Expect = 9e-05
Identities = 48/161 (29%), Positives = 60/161 (37%), Gaps = 25/161 (15%)
Query: 593 QQQPPPQQPPPPQPPPQQPPPPPSYSPARNP-PGASTYNKNSNIPGSSANTSTPTVSSYS 651
QQQ QQ Q PPPP P +P G S+++ + S + P
Sbjct: 490 QQQQQQQQQQQQQHHGNSGPPPPGAFP--HPLEGGSSHHAHPYAMSPSLGSLRPY----- 542
Query: 652 PPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYN------YGSYGGYNP--------APY 697
PP P++ PP++Q YSQ A P PP + N GSY +P APY
Sbjct: 543 PPGPAHLPPPHSQVSYSQ---AGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY 599
Query: 698 TPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYG 738
PP PT T A Y PP YG
Sbjct: 600 PFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640
Score = 44.7 bits (104), Expect = 3e-04
Identities = 53/210 (25%), Positives = 74/210 (35%), Gaps = 42/210 (20%)
Query: 567 YSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQP---PPP-------QPPPQQPPPPPS 616
YS + + +++S++ S + P Q P P PPP QPP P PS
Sbjct: 375 YSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434
Query: 617 YSP-ARNPPGASTYNK---NSNIPGSSANTSTPTVSSYSPP-------------QPSYSQ 659
+ ++ PP Y + NSN ST S+ PP Q Q
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQ 494
Query: 660 PPYNQGGYSQGYTAPPPPPPPP---------PAYNY------GSYGGYNPAPYTPPPPPT 704
Q G + PPPP P A+ Y GS Y P P PPP +
Sbjct: 495 QQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHS 554
Query: 705 AQTYPQPSYNQYQQYAQQWNQYYQNQGQWP 734
+Y Q N + + +QG +P
Sbjct: 555 QVSYSQAGPNGPPVSSSSNSSSSTSQGSYP 584
Score = 44.3 bits (103), Expect = 4e-04
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 21/141 (14%)
Query: 580 NNSNNRGSYNRAPQQ--QPPPQQPPPPQPP---PQQP----PPPPSYSPA-----RNPPG 625
N+S++ ++ P + PPP PP PQPP P+QP P PS +P PP
Sbjct: 143 NDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPT 202
Query: 626 ASTYNKNSNIPGSSANT---STPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPP 682
+ + P T V S P P + GG + G PPP P
Sbjct: 203 SRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTP--- 259
Query: 683 AYNYGSYGGYNPAPYTPPPPP 703
+ S G P PP P
Sbjct: 260 -ISVSSSGASGAPPTKPPTTP 279
Score = 38.1 bits (87), Expect = 0.030
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 579 NNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGS 638
+N S + Y+ + Q P + PPP + P+ PP ++ ++
Sbjct: 127 DNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPH 186
Query: 639 SANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYT 698
+ T T + PP S+ + APP PPP P G GG P
Sbjct: 187 PSVTPTGYHAPMEPPT-------------SRMFQAPPGAPPPHPQLYPGGTGGVLSGPPM 233
Query: 699 PP 700
P
Sbjct: 234 GP 235
Score = 31.2 bits (69), Expect = 3.7
Identities = 37/133 (27%), Positives = 47/133 (35%), Gaps = 30/133 (22%)
Query: 529 YENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSY 588
Y+ PPG G + G+ G YRG +G G +
Sbjct: 649 YKTATPPGYKPGSPPSFRTGTPPG--YRGTSPPAGPGTFKPG------------------ 688
Query: 589 NRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVS 648
+P P P P P P PPPP + +PA PP ++T K P T V
Sbjct: 689 --SPTVGPGPLPPAGPSGLPSLPPPP-A-APASGPPLSATQIKQE--PAEEYETPESPV- 741
Query: 649 SYSPPQPSYSQPP 661
PP S S PP
Sbjct: 742 ---PPARSPSPPP 751
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 65.1 bits (157), Expect = 2e-10
Identities = 50/150 (33%), Positives = 63/150 (42%), Gaps = 32/150 (21%)
Query: 568 SQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP-----QQPPPPQPPPQQPPPPPSYSPARN 622
SQ+ + + D SNN Y QQQPPP QQ PPQPPPQQ P +PA+
Sbjct: 270 SQHGFSSLLGDIPPSNNYYMYQ---QQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQG 326
Query: 623 PPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPP 682
P G + TP+ +PP Q G ++GY PP PP
Sbjct: 327 PSAV----------GGAPPLHTPSTDGCTPPGGK-------QAG-AEGYGPPPVMAMHPP 368
Query: 683 AYNYGSYGGY------NPAPYTPPPPPTAQ 706
+G Y + +PA PPP P AQ
Sbjct: 369 PLQHGGYHPHQHHPHSHPAQQPPPPQPQAQ 398
Score = 31.2 bits (69), Expect = 3.7
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 603 PPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPY 662
PPQ +PP P + + + S + S + P + Y P P Y P
Sbjct: 481 PPQGGTHRPPAPARIADSCALTSGKQESAMSQV-NSYGHPQAPHL--YPGPSPMYPIPTQ 537
Query: 663 NQGGYSQ-GYTAPPPPPPPPPAYN 685
+ GY++ + P P PPP N
Sbjct: 538 DSAGYNRPAHHMVPRPSVPPPGAN 561
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,763,373
Number of Sequences: 37866
Number of extensions: 2952761
Number of successful extensions: 75797
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 1512
Number of HSP's that attempted gapping in prelim test: 20338
Number of HSP's gapped (non-prelim): 22706
length of query: 756
length of database: 18,247,518
effective HSP length: 110
effective length of query: 646
effective length of database: 14,082,258
effective search space: 9097138668
effective search space used: 9097138668
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.