SCN4B 13288

Name: SCN4B	Sequence: fasta or formatted (94aa)		NCBI GI: 215272332
Description: sodium channel, voltage-gated, type IV, beta isoform 2		Referenced in: Sodium Channels
Other entries for this name: alt prot [118aa] sodium channel, voltage-gated, type IV, beta isoform 3 alt prot [228aa] sodium channel, voltage-gated, type IV, beta isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 5 1 C cysteine 1.1 1 1 D aspartate 3.2 3 1 E glutamate 7.4 7 2 F phenylalanine 1.1 1 1 G glycine 12.8 12 2 H histidine 0.0 0 0 I isoleucine 9.6 9 2 K lysine 11.7 11 3 L leucine 14.9 14 2 M methionine 1.1 1 1 N asparagine 4.3 4 1 P proline 5.3 5 2 Q glutamine 0.0 0 0 R arginine 2.1 2 1 S serine 5.3 5 3 T threonine 5.3 5 1 V valine 8.5 8 2 W tryptophan 1.1 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type IV, beta isofor... SCN4B 0.725 sodium channel, voltage-gated, type IV, beta isoform... SCN4B 0.725 sodium channel, voltage-gated, type IV, beta isofor... SCN2B 0.044 sodium channel, voltage-gated, type II, beta CDCP1 0.025 CUB domain-containing protein 1 isoform 1 CDH1 0.019 cadherin 1, type 1 preproprotein PTPRH 0.019 protein tyrosine phosphatase, receptor type, H isof... PTPRH 0.019 protein tyrosine phosphatase, receptor type, H isof... PVRL1 0.019 poliovirus receptor-related 1 isoform 1 MPZ 0.019 myelin protein zero SLC19A3 0.019 solute carrier family 19, member 3 ITGB2 0.019 integrin, beta 2 precursor ITGB2 0.019 integrin, beta 2 precursor SDC2 0.019 syndecan 2 precursor SDC3 0.019 syndecan 3 AUTS2 0.019 autism susceptibility candidate 2 isoform 3 AUTS2 0.019 autism susceptibility candidate 2 isoform 2 AUTS2 0.019 autism susceptibility candidate 2 isoform 1 TGM4 0.019 transglutaminase 4 (prostate) CDH12 0.019 cadherin 12, type 2 preproprotein CXADR 0.019 coxsackie virus and adenovirus receptor precursor [Ho... CNTNAP3 0.013 cell recognition molecule CASPR3 CDH7 0.013 cadherin 7, type 2 preproprotein CDH7 0.013 cadherin 7, type 2 preproprotein LOC100293077 0.013 PREDICTED: hypothetical protein LOC100288791 0.013 PREDICTED: hypothetical protein LOC100288791 0.013 PREDICTED: hypothetical protein XP_002343306 PTPRM 0.013 protein tyrosine phosphatase, receptor type, M isof... PTPRM 0.013 protein tyrosine phosphatase, receptor type, M isof... FLJ32682 0.013 hypothetical protein LOC220081 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.