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Search of human proteins with 21450814
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21450814 ARKadia-like 1 isoform a [Homo sapiens]
(404 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21450814 ARKadia-like 1 isoform a [Homo sapiens] 789 0.0
gi|56549656 ARKadia-like 1 isoform b [Homo sapiens] 605 e-173
gi|37595553 ring finger protein 111 [Homo sapiens] 97 3e-20
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 58 1e-08
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 45 9e-05
gi|50962882 G patch domain containing 8 [Homo sapiens] 43 4e-04
gi|63176611 modulator of estrogen induced transcription isoform ... 42 8e-04
gi|217330641 IWS1 homolog [Homo sapiens] 42 0.001
gi|168229156 NFKB activating protein [Homo sapiens] 41 0.002
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 41 0.002
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 41 0.002
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 41 0.002
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 40 0.003
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 40 0.003
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 40 0.003
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 40 0.004
gi|54633315 deoxynucleotidyltransferase, terminal, interacting p... 40 0.005
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 40 0.005
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 39 0.006
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 39 0.008
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 39 0.008
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 39 0.008
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 39 0.008
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 39 0.011
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 39 0.011
gi|21361684 G patch domain containing 1 [Homo sapiens] 39 0.011
gi|157738619 smoothelin-like 1 [Homo sapiens] 39 0.011
gi|109809739 La ribonucleoprotein domain family, member 7 [Homo ... 38 0.019
gi|109809741 La ribonucleoprotein domain family, member 7 [Homo ... 38 0.019
gi|161016767 mucin 21 [Homo sapiens] 38 0.019
>gi|21450814 ARKadia-like 1 isoform a [Homo sapiens]
Length = 404
Score = 789 bits (2038), Expect = 0.0
Identities = 404/404 (100%), Positives = 404/404 (100%)
Query: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM
Sbjct: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
Query: 61 ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA 120
ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA
Sbjct: 61 ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA 120
Query: 121 ETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHK 180
ETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHK
Sbjct: 121 ETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHK 180
Query: 181 ERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDG 240
ERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDG
Sbjct: 181 ERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDG 240
Query: 241 PPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAG 300
PPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAG
Sbjct: 241 PPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAG 300
Query: 301 HLDPGFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHG 360
HLDPGFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHG
Sbjct: 301 HLDPGFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHG 360
Query: 361 SGTQYVSTRQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL 404
SGTQYVSTRQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL
Sbjct: 361 SGTQYVSTRQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL 404
>gi|56549656 ARKadia-like 1 isoform b [Homo sapiens]
Length = 343
Score = 605 bits (1561), Expect = e-173
Identities = 330/405 (81%), Positives = 334/405 (82%), Gaps = 63/405 (15%)
Query: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM
Sbjct: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
Query: 61 ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA 120
ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA
Sbjct: 61 ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA 120
Query: 121 ETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHK 180
ETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHK
Sbjct: 121 ETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHK 180
Query: 181 ERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDG 240
ERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSST
Sbjct: 181 ERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSST----------------------- 217
Query: 241 PPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEA- 299
S ++ D EV SG + + AE
Sbjct: 218 ---------SSSDDDEEV------------------------------SGSSKTITAEIP 238
Query: 300 GHLDPGFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKH 359
GHLDPGFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKH
Sbjct: 239 GHLDPGFLASDKTSAGNAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKH 298
Query: 360 GSGTQYVSTRQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL 404
GSGTQYVSTRQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL
Sbjct: 299 GSGTQYVSTRQTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL 343
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 97.1 bits (240), Expect = 3e-20
Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 70/322 (21%)
Query: 86 ESDSS-NHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRSR 144
++DSS + C+ SPSSS H DSDT++S E+ E S + + S + K R+
Sbjct: 129 DNDSSFSDCLSSPSSSLHFGDSDTVTSDEDKEVSVRHSQTILNAKSRSHSARSHKWPRTE 188
Query: 145 SESETSTMAAKKNRQSSDKQNGRVAK--VKGH---RSQKHKERIRLLRQKREAAARKKYN 199
+ES + + + S + K VK + R+QK KERI + R+KRE AR+KY
Sbjct: 189 TESVSGLLMKRPCLHGSSLRRLPCRKRFVKNNSSQRTQKQKERILMQRKKREVLARRKYA 248
Query: 200 LL-QDSSTSDSDLTCDSSTS-SSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTNSDPE 257
LL SS+S++DL+ +SS+S S++ +E+
Sbjct: 249 LLPSSSSSSENDLSSESSSSSSTEGEED-------------------------------- 276
Query: 258 VVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKTSAGNA 317
L + + H N+ +G +D + + +S
Sbjct: 277 -------LFVSASENHQNNPA------------------VPSGSIDEDVVVIEASSTPQV 311
Query: 318 PLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHGSGTQYVSTRQTQSWTAV 377
NEEIN+ S+DSEVEIV V E R R + S S W GS + ++ ++ + +
Sbjct: 312 TANEEINVTSTDSEVEIVTVGESYR---SRSTLGHSRSHWSQGSSSHASRPQEPRNRSRI 368
Query: 378 TP--QQTWASPAEVVDLTLDED 397
+ Q + AEVVDLT+DED
Sbjct: 369 STVIQPLRQNAAEVVDLTVDED 390
Score = 38.5 bits (88), Expect = 0.011
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 53 SSMPCLLMELRRDSSESQLASTESDKPT----TGRVYESDSSNHCMLSPSSSGHLADSDT 108
S + ++ LR++++E + + D+PT T ES +++ + + + S SDT
Sbjct: 366 SRISTVIQPLRQNAAEVVDLTVDEDEPTVVPTTSARMESQATSASINNSNPSTSEQASDT 425
Query: 109 LSSAEENEPSQ-AETAVEGDPSGVSGATVGRKSRRSRSESETST 151
S+ ++PS +ET+ + +G ++G SRR+ S + T T
Sbjct: 426 ASAVTSSQPSTVSETSATLTSNSTTGTSIGDDSRRTTSSAVTET 469
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 58.2 bits (139), Expect = 1e-08
Identities = 61/317 (19%), Positives = 127/317 (40%), Gaps = 15/317 (4%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
+S++ ++ +++ D S +S D +DS+ S DSS+S S
Sbjct: 592 DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSES----------DSSDSDSKSD 641
Query: 75 ESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA 134
SD ++ SDSS+ S +SS SD+ S++ + S + + + S S
Sbjct: 642 SSDSNSSDSSDNSDSSD----SSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSN 697
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAA 194
+ S+S++S + N SSD + + + +++
Sbjct: 698 SSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSD 757
Query: 195 RKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTNS 254
+ DSS S S++SSD ++ + S + ++ D D SD +S
Sbjct: 758 SSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSD-SS 816
Query: 255 DPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKTSA 314
D + N + ++ + SNS D+ + S +++ + +SD +++
Sbjct: 817 DSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNS 876
Query: 315 GNAPLNEEINIASSDSE 331
++ + + N +S+ S+
Sbjct: 877 SDSSDSSDSNESSNSSD 893
Score = 54.3 bits (129), Expect = 2e-07
Identities = 68/328 (20%), Positives = 134/328 (40%), Gaps = 14/328 (4%)
Query: 16 SEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLASTE 75
S++ + +++ DGS + +S + D S S DSS+S +S
Sbjct: 833 SDSSNSSDSSDSSDSSDGS-DSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNS 891
Query: 76 SDKPTTGRVYESDSSNHCMLSPSS-SGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA 134
SD + +SDSS+ S SS S + +DS S++ +N S ++++ D S S +
Sbjct: 892 SDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNS-SDSSNSSDSSDSSDS 950
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQK--HKERIRLLRQKREA 192
+ S S S +S + + SSD N + S + +
Sbjct: 951 SNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1010
Query: 193 AARKKYNLLQDSSTSDSDLTCDSSTS--------SSDDDEEVSGSSKTITAEIPDGPPVV 244
+ N S++SDS + DSS S SSD + S+ + +++ D
Sbjct: 1011 DSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1070
Query: 245 AHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELN-AEAGHLD 303
D SD++ E + + ++ + S+S D+ + +S + N +++
Sbjct: 1071 DSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1130
Query: 304 PGFLASDKTSAGNAPLNEEINIASSDSE 331
+SD +++ ++ + E + +S S+
Sbjct: 1131 DSSDSSDSSNSSDSSDSSESSDSSDSSD 1158
Score = 52.8 bits (125), Expect = 6e-07
Identities = 66/322 (20%), Positives = 124/322 (38%), Gaps = 15/322 (4%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
+S++ + ++ D S +S D S SS R DSS S +S
Sbjct: 817 DSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSN-------RSDSSNSSDSSD 869
Query: 75 ESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA 134
SD + +S SN S SS SD+ SS N ++++ D S S +
Sbjct: 870 SSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNS 929
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQ----SSDKQNGRVAKVKGHRSQKHKERIRLLRQKR 190
+ S S + S++S + N SSD N + S +
Sbjct: 930 SDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNS--SDSSDSNSSDSSDSSNSSDSSD 987
Query: 191 EAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMS 250
+ + + S++SDS + DSS SS+ D S S +++ D D S
Sbjct: 988 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSN-SSDSSDSSDSSDSSDSS 1046
Query: 251 DTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELN-AEAGHLDPGFLAS 309
D++ + N + ++ + S+S D+ + +S + N +++ +S
Sbjct: 1047 DSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSS 1106
Query: 310 DKTSAGNAPLNEEINIASSDSE 331
D + + ++ + + + +S S+
Sbjct: 1107 DSSDSSDSSDSSDSSNSSDSSD 1128
Score = 52.4 bits (124), Expect = 7e-07
Identities = 64/319 (20%), Positives = 126/319 (39%), Gaps = 21/319 (6%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
+S +S+ + + D S S +DS+ S DSS+S +S
Sbjct: 553 DSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSD 612
Query: 75 ESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLS-SAEENEPSQAETAVEGDPSGVSG 133
SD SDSS+ S S +DSD+ S S++ N ++ + D S S
Sbjct: 613 SSD--------SSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSN 664
Query: 134 ATVGRKSRRSRSESETSTMA-AKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREA 192
++ S S S +S + + + SSD N + S ++
Sbjct: 665 SSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDS---------DSSDS 715
Query: 193 AARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDT 252
+ N S++ SD + S++S S D + S SS +++ D D SD+
Sbjct: 716 SDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSD--SSDSSDSSNSSDSSDSSDS 773
Query: 253 NSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKT 312
+ + N + ++ + S+S D+ + +S + ++++ + +SD +
Sbjct: 774 SDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSS 833
Query: 313 SAGNAPLNEEINIASSDSE 331
+ N+ + + + +S S+
Sbjct: 834 DSSNSSDSSDSSDSSDGSD 852
Score = 51.2 bits (121), Expect = 2e-06
Identities = 63/318 (19%), Positives = 120/318 (37%), Gaps = 30/318 (9%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
+S + + +++ + S +S D S+ S DSS S +S
Sbjct: 644 DSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSD 703
Query: 75 ESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA 134
SD + SDSSN SS SD+ +S++ ++ S + + + S S
Sbjct: 704 SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSN 763
Query: 135 TVGRKSRRSRSESETSTMAAKKN--RQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREA 192
+ S+S S+ ++ N SSD + + + S
Sbjct: 764 SSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDS----------- 812
Query: 193 AARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDT 252
DSS SDS + DSS +SSD + + S + +++ DG SD+
Sbjct: 813 ---------SDSSDSDSSNSSDSS-NSSDSSDSSNSSDSSDSSDSSDGSD-------SDS 855
Query: 253 NSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKT 312
++ + N + ++ S+S D+ + +S + N+ +SD +
Sbjct: 856 SNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSS 915
Query: 313 SAGNAPLNEEINIASSDS 330
+ N+ + E + +S +S
Sbjct: 916 DSSNSSDSSESSNSSDNS 933
Score = 50.1 bits (118), Expect = 4e-06
Identities = 61/317 (19%), Positives = 123/317 (38%), Gaps = 10/317 (3%)
Query: 16 SEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLASTE 75
S++ + +++ D S +S D S S DSS+S +S
Sbjct: 983 SDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDS 1042
Query: 76 SDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA-ETAVEGDPSGVSGA 134
SD + +S +S+ S SS SD+ S++ +E S + +++ D S S +
Sbjct: 1043 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDS 1102
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAA 194
+ S S S++S + + SSD + + + S + +++
Sbjct: 1103 SDSSDSSDSSDSSDSSD--SSNSSDSSDSSDSSDSSDSSNSSDSSDSS-----ESSDSSD 1155
Query: 195 RKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTNS 254
+ DSS S S++SSD + S + +++ D D SD++
Sbjct: 1156 SSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1215
Query: 255 DPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKTSA 314
+ + + ++ E S+S D+ + +S + ++ D + ++ +
Sbjct: 1216 SSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKS 1275
Query: 315 GNAPLNEEINIASSDSE 331
GN N + + SDSE
Sbjct: 1276 GNG--NNNGSDSDSDSE 1290
Score = 45.4 bits (106), Expect = 9e-05
Identities = 57/267 (21%), Positives = 118/267 (44%), Gaps = 19/267 (7%)
Query: 75 ESDKPTTGR-------VYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGD 127
++DK +G+ SDSSN S SS +DS++ S ++ ++ ++++ + D
Sbjct: 536 DNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSS-DSD 594
Query: 128 PSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLR 187
S S ++ S S S++S + K+ S + + + K S +
Sbjct: 595 SSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNS 654
Query: 188 QKREAAARKKYNLLQDSS-TSDSDLTCDSSTSS-SDDDEEVSGSSKTITAEIPDGPPVVA 245
+++ + DSS +SDS + DSS SS S D + S SS++ +
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSD 714
Query: 246 HYDMSDTN-SDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDP 304
D S++N SD + N ++ + SNS D+ + +S + ++++ +
Sbjct: 715 SSDSSNSNSSDSDSSN------SSDSSDSSNSSDSSDSSDSSNSSDSSD--SSDSSNSSD 766
Query: 305 GFLASDKTSAGNAPLNEEINIASSDSE 331
+SD + + ++ + + N +S+ S+
Sbjct: 767 SSDSSDSSDSSDSSNSSDSNDSSNSSD 793
Score = 43.1 bits (100), Expect = 4e-04
Identities = 48/249 (19%), Positives = 94/249 (37%), Gaps = 1/249 (0%)
Query: 16 SEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLASTE 75
S++ + ++ D S +S D S S DSS+S +S
Sbjct: 1046 SDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDS 1105
Query: 76 SDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQA-ETAVEGDPSGVSGA 134
SD + +S S++ S SS SD+ +S++ ++ S++ +++ D S S +
Sbjct: 1106 SDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDS 1165
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAA 194
+ S S S +S + + S + S + + +
Sbjct: 1166 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1225
Query: 195 RKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTNS 254
+ + S +SDS + DSS SS D S S + + + D + + + ++S
Sbjct: 1226 SDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDS 1285
Query: 255 DPEVVNVDN 263
D + D+
Sbjct: 1286 DSDSEGSDS 1294
Score = 40.8 bits (94), Expect = 0.002
Identities = 54/280 (19%), Positives = 110/280 (39%), Gaps = 51/280 (18%)
Query: 63 RRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAET 122
+ DS + + S++SD SDSSN S SS +DS++ S ++ ++ +++
Sbjct: 539 KSDSGKGKSDSSDSDS--------SDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDS 590
Query: 123 AVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKER 182
+ + D S S ++ S S S++S + K+ S + + + K S +
Sbjct: 591 S-DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNS-- 647
Query: 183 IRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSS-----------SDDDEEVSGSSK 231
S +SD+ + DSS SS SD S+
Sbjct: 648 ---------------------SDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNS 686
Query: 232 TITAEIPDGPPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGL 291
+ +++ D D SD++ + D+ + + + SNS D+ + +S
Sbjct: 687 SDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDS 746
Query: 292 LEELNAEAGHLDPGFLASDKTSAGNAPLNEEINIASSDSE 331
+ N+ +SD + + N+ + + + +S S+
Sbjct: 747 SDSSNSSD--------SSDSSDSSNSSDSSDSSDSSDSSD 778
Score = 36.6 bits (83), Expect = 0.042
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 29/246 (11%)
Query: 98 SSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKN 157
S++G ++SD S + ++ S ++GD S + G S S++ +S+
Sbjct: 439 SNTGSDSNSDGYDSYDFDDKS-----MQGDDPNSSDESNGNDDANSESDNNSSSRGDASY 493
Query: 158 RQSSDKQNGRVAKVKG------------HRSQKHKERIRLLRQKREAAARKKYNLLQDSS 205
K NG + KG + S + ++ + K + DS
Sbjct: 494 NSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSD 553
Query: 206 TSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTNSDPEVVNVDNLL 265
+SDS + DSS SS D + + SS + +++ D SD +SD + + N
Sbjct: 554 SSDSSNSSDSSDSSDSDSSDSNSSSDSDSSD----------SDSSD-SSDSDSSDSSNSS 602
Query: 266 AAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKTSAGNAPLNEEINI 325
++ + S+S D+ + S E ++++ ++ S+ N+ ++ N
Sbjct: 603 DSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNS 662
Query: 326 A-SSDS 330
+ SSDS
Sbjct: 663 SNSSDS 668
Score = 35.4 bits (80), Expect = 0.093
Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 34/292 (11%)
Query: 13 LIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLA 72
+++ + P A + ED +E + + + + I+S R + E+++
Sbjct: 178 VVQEDGPQVAGSNNSTDNEDEIIENSCRNEGNTSEITPQINSK-------RNGTKEAEVT 230
Query: 73 STESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVS 132
P TG D+S+ SPS +G D D S +E+E + + G
Sbjct: 231 ------PGTGEDAGLDNSDG---SPSGNGADEDEDEGSGDDEDEEAGNGKDSSNNSKGQE 281
Query: 133 GATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREA 192
G G++ S + S + + + + V K +S+++ I +
Sbjct: 282 GQDHGKEDDHDSSIGQNSDSKEYYDPEGKEDPHNEVDGDKTSKSEENSAGIPEDNGSQRI 341
Query: 193 AARKKYNLLQDSSTSDSDLTCDSST----SSSDDDEEVSGSS---KTITAEI---PDGPP 242
+K N ++S ++ +T +S T S D E+ G S + IT E+ +G
Sbjct: 342 EDTQKLN-HRESKRVENRITKESETHAVGKSQDKGIEIKGPSSGNRNITKEVGKGNEGKE 400
Query: 243 VVAHYDM----SDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSG 290
+ M + + EVVN++ E N VG +TG+ + G
Sbjct: 401 DKGQHGMILGKGNVKTQGEVVNIE---GPGQKSEPGNKVGHSNTGSDSNSDG 449
Score = 33.5 bits (75), Expect = 0.35
Identities = 28/117 (23%), Positives = 45/117 (38%)
Query: 16 SEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLASTE 75
S++ + +++ D S +S D S S DS+ES +S
Sbjct: 1181 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDS 1240
Query: 76 SDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVS 132
SD + +S S+ S S S +DS + S N S +++ EG S S
Sbjct: 1241 SDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGSDSNHS 1297
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 45.4 bits (106), Expect = 9e-05
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 10/147 (6%)
Query: 96 SPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAK 155
S SSS + S + SS+ + S+ E EGD +G G G ++ + S S ++
Sbjct: 2557 SESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSS 2616
Query: 156 KNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDS 215
+ SS + + S +++ + SS+S S + S
Sbjct: 2617 SSSSSSSSSSSSSSSSSSSSSSSSSS----------SSSSSSSSSSSSSSSSSSSSSSSS 2666
Query: 216 STSSSDDDEEVSGSSKTITAEIPDGPP 242
S+SSS DE+ S SS A P P
Sbjct: 2667 SSSSSTTDEDSSCSSDDEAAPAPTAGP 2693
Score = 30.4 bits (67), Expect = 3.0
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 66 SSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVE 125
SS S +S+ S ++ S SS+ S SSS + S + SS+ + + +++
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCS 2680
Query: 126 GDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSS 161
D T G ++ + +T A K R S+
Sbjct: 2681 SDDEAAPAPTAGPSAQAALPTK--ATKQAGKARPSA 2714
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 43.1 bits (100), Expect = 4e-04
Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 73 STESDKPTTGRVYE-SDSSNHCMLSPSSSGHLADSDTLSSAEEN---------------- 115
S S K +G+ + H S H AD++ SS E+
Sbjct: 661 SLPSKKERSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAESGEKSKKRKKRKRKKNK 720
Query: 116 --EPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKG 173
P+ +E + +P G R+ RR++ +S+ ++ A++ + G + +
Sbjct: 721 SSAPADSERGPKPEPPGSGSPAPPRRRRRAQDDSQRRSLPAEEGSSGKKDEGGGGSSSQD 780
Query: 174 HRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTS-----------SSDD 222
H +KHK + +R A ++ S S D D ++S S ++
Sbjct: 781 HGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQPSSGDEDSDDASSHRLHQKSPSQYSEEE 840
Query: 223 DEEVSGS 229
+EE SGS
Sbjct: 841 EEEDSGS 847
Score = 31.6 bits (70), Expect = 1.3
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 19/148 (12%)
Query: 87 SDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGV----SGATVGRK--- 139
S S+H PSS +D + + PSQ E + SG S + GR+
Sbjct: 804 SSRSSH-RSQPSSGDEDSDDASSHRLHQKSPSQYSEEEEEEDSGSEHSRSRSRSGRRHSS 862
Query: 140 ---SRRSRSESETS----TMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREA 192
SRRS S S + + +++ S D + + + H + H +
Sbjct: 863 HRSSRRSYSSSSDASSDQSCYSRQRSYSDDSYSDYSDRSRRHSKRSHDSDDSDYASSKHR 922
Query: 193 AARKKYNLLQDSSTSDSDLTCDSSTSSS 220
+ R KY+ SS D L+C S S S
Sbjct: 923 SKRHKYS----SSDDDYSLSCSQSRSRS 946
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 42.4 bits (98), Expect = 8e-04
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 36/251 (14%)
Query: 9 KVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSE 68
+ ELIE+E ++ KE+ S E+E+Q +D T +++ E +D +
Sbjct: 150 RAHELIEAEGI-----EDIEKEDIESQEIEAQEGED----DTFLTAQDGEEEENEKDIAG 200
Query: 69 SQLASTESDKP--TTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEG 126
S + E KP + G + E+D + H + ++ A+ D +S QAE A+
Sbjct: 201 SGDGTQEVSKPLPSEGSLAEADHTAHEEMEAHTTVKEAEDDNISVT-----IQAEDAITL 255
Query: 127 DPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERI--- 183
D G G+ + + SE+ QS +K++ H+ K ++ +
Sbjct: 256 DFDGDDLLETGKNVKITDSEASKPKDGQDAIAQSPEKESKDYEMNANHKDGKKEDCVKGD 315
Query: 184 ------RLLRQKREAAARKKYNLLQDSST--------SDSDLTCDSSTSSSDD---DEEV 226
R +K E+ ++K L + S+ S S + DS TSS DD
Sbjct: 316 PVEKEARESSKKAESGDKEKDTLKKGPSSTGASGQAKSSSKESKDSKTSSKDDKGSTSST 375
Query: 227 SGSSKTITAEI 237
SGSS + T I
Sbjct: 376 SGSSGSSTKNI 386
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 41.6 bits (96), Expect = 0.001
Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 55/262 (20%)
Query: 15 ESEAPPKASEQETAKEEDGSVELES----QVQKDGVADSTVISSMPCLLMELRRDSSE-- 68
ESE PP+ ++ EE + ++ K V+DS S P ++ E
Sbjct: 186 ESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSE--SEEPPRHQASDSENEELP 243
Query: 69 -SQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENE------PSQAE 121
+++ +ES+ P R SDS N + P S ++ + A ++E P ++
Sbjct: 244 KPRISDSESEDPP--RHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSD 301
Query: 122 TAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNR----------------------Q 159
+ EG G + + + R + + E+ + ++N+
Sbjct: 302 SESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFH 361
Query: 160 SSD--KQNGRVAKVKGHRSQKHKERIRLLRQK---------REAAARKKYNLLQDSSTSD 208
SSD ++ + K+ +K E ++ ++K E A+ KK ++ D+ SD
Sbjct: 362 SSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSD 421
Query: 209 SDLTCDSS-----TSSSDDDEE 225
SD D S T +SD +EE
Sbjct: 422 SDAVSDKSGKREKTIASDSEEE 443
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 59 LMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPS 118
L++ R+ S Q +E + R+ E + LSP + DSD + E+ EP
Sbjct: 117 LLDKEREESLRQKRLSERE-----RIGELGAPEVWGLSPKNPE--PDSDEHTPVEDEEPK 169
Query: 119 QAETAV---EGDPSGVSGATVGRKSRRSRSES---------ETSTMAAKKNRQSSDKQNG 166
++ T+ E + S + R +R + +S E S + SSD+ N
Sbjct: 170 KSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNK 229
Query: 167 RVAKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDS 209
R AK + +K K R + ++KR +RK+ + DSS+ +S
Sbjct: 230 RRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESS---DSSSKES 269
Score = 37.0 bits (84), Expect = 0.032
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Query: 63 RRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSS---GHLADSDTLSSAEENEPSQ 119
R S S+ S ++P+ R S++ + S S G +L E E +
Sbjct: 68 RNQSYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPSLLDKEREESLR 127
Query: 120 AETAVEGDPSGVSGATV--GRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQ 177
+ E + G GA G + +S+ T + + S + K +S
Sbjct: 128 QKRLSERERIGELGAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSS 187
Query: 178 KHKERIRLLRQKREAAAR-KKYNLLQDSSTSDSDLTCDSSTSSSDDDEE 225
+ KER + R+K+ + + KKY+ DSD DS T SSD+D +
Sbjct: 188 RSKERSKKRRKKKSSKRKHKKYS-------EDSDSDSDSETDSSDEDNK 229
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 40.8 bits (94), Expect = 0.002
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
+ EAP K + +V +S K A + LL + DSS S+ S+
Sbjct: 373 DDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTR-KADSSSSEEESS 431
Query: 75 ESDKPTTGRVYESDS---------SNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVE 125
S++ T ++ + S +P S + SS+EE E +++AV+
Sbjct: 432 SSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVK 491
Query: 126 GDPSGVSGATVGRK---SRRSRSESETSTMAAKKNRQSSDKQNGR 167
P V+G K +++ ++ES S+ + + + +K G+
Sbjct: 492 KKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGK 536
Score = 38.5 bits (88), Expect = 0.011
Identities = 46/221 (20%), Positives = 82/221 (37%), Gaps = 43/221 (19%)
Query: 11 EELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQ 70
++ +E + P ++SE +++ E D S E E + V P +
Sbjct: 310 KKAVEKQQPVESSE-DSSDESDSSSEEEKKPPTKAVVSKATTKPPPA-----------KK 357
Query: 71 LASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSG 130
A + SD +SDSS +G +S + P+ A P G
Sbjct: 358 AAESSSDSS------DSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVG 411
Query: 131 VSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKR 190
+ RK+ S SE E+S+ S++ K + + K
Sbjct: 412 GGQKLLTRKADSSSSEEESSS------------------------SEEEKTKKMVATTKP 447
Query: 191 EAAARKKYNL-LQDSSTSDSDLTCDSSTSSSDDDEEVSGSS 230
+A A+ +L + + D + DS +SSS+++EE + S
Sbjct: 448 KATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKS 488
Score = 36.2 bits (82), Expect = 0.054
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 60 MELRRDSS-ESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPS 118
+E DSS ES +S E KP T V ++ ++ SD+ SS ++ PS
Sbjct: 319 VESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPS 378
Query: 119 QAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKK-----NRQSSDKQNGRVAKVKG 173
+ P+G + + + + ++S + A K+ + + K + ++ +
Sbjct: 379 K--------PAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEES 430
Query: 174 HRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTI 233
S++ K + + K +A A+ +L + S + S SSS ++EE S +
Sbjct: 431 SSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAV 490
Score = 32.0 bits (71), Expect = 1.0
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 49/239 (20%)
Query: 63 RRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENE----PS 118
++D++ S L S + +V E + ++ + + SD+ S+EE E P
Sbjct: 42 QQDANASSLLDIYSFWLKSAKVPERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPP 101
Query: 119 QAETAVEGDPSGVSGATVGRKSRRSRSESETS-----------------------TMAAK 155
+ AV G+ K+ S S E+S A
Sbjct: 102 AKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPP 161
Query: 156 KNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREA------AARKKYNLLQDSSTSDS 209
K +SSD + ++ + ++QK K ++ + +A AA K N SS+S S
Sbjct: 162 KKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSS 221
Query: 210 DLTCDSSTSSSDDDEEVSGSS--------KTITAEIP---DGPPVVAHYDMSDTNSDPE 257
SS+SSSDD EE ++ K + A+ P P D++SD E
Sbjct: 222 -----SSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEE 275
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 10/221 (4%)
Query: 14 IESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVI-SSMPCLLMELRRDSSESQLA 72
+E + E+ +EE L+ +++ D T+ +S+ ++ D++E++
Sbjct: 88 VEGDDEAAFLERLARREERRQKRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENETT 147
Query: 73 STESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVS 132
E + YE + + S + + +E E + E G G +
Sbjct: 148 EKEEKSESRQERYEIEETETVTKSYQKNDWRDAEENKKEDKEKEEEEEEKPKRGS-IGEN 206
Query: 133 GATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKH--------KERIR 184
V + + + S+ ET M+ K + SS++ + +G H KER
Sbjct: 207 QVEVMVEEKTTESQEETVVMSLKNGQISSEEPKQEEEREQGSDEISHHEKMEEEDKERAE 266
Query: 185 LLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEE 225
R + EA R++ QD +D ++ ++ + E
Sbjct: 267 AERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERE 307
Score = 32.0 bits (71), Expect = 1.0
Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 13/194 (6%)
Query: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
+K E+ +E EA KA+ QE + E E + +K + I
Sbjct: 280 IKAEQDKKIADERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAA 339
Query: 61 ELR-RDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQ 119
E R R E + A+ E + ++ + + EE + +
Sbjct: 340 EERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQKRNKQLEEKKHAM 399
Query: 120 AETAVEGDP--SGVSGATVGRKSR----------RSRSESETSTMAAKKNRQSSDKQNGR 167
ET ++G+ + G V K + + E + + + AK+ + DK +
Sbjct: 400 QETKIKGEKVEQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKPTFK 459
Query: 168 VAKVKGHRSQKHKE 181
++K + +K KE
Sbjct: 460 KEEIKDEKIKKDKE 473
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/260 (20%), Positives = 107/260 (41%), Gaps = 25/260 (9%)
Query: 2 KMEEAVGKVEELIESE-APPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
K E+ ++ +SE + +A++ KE+ G +E Q+ + S C
Sbjct: 797 KYSESRSSLDYSSDSEQSSVQATQSAQEKEKQGQMERTHNKQEKNRGEEKSKSERECPHS 856
Query: 61 ELR----RDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENE 116
+ R S + S K G ++S+S++ ++ +S S E
Sbjct: 857 KKRTLKENLSDHLRNGSKPKRKNYAGSKWDSESNSERDVTKNSKNDSHPSSDKEEGEATS 916
Query: 117 PSQAETA---VEGDPSGVS----------GATVGRKSRRSRSESETSTMAAKKNRQSSDK 163
S++E + ++ P+ S GA K R S S+SE S ++ NR K
Sbjct: 917 DSESEVSEIHIKVKPTTKSSTNTSLPDDNGAWKSSKQRTSTSDSEGSCSNSENNRGKPQK 976
Query: 164 -QNGRVAKVKGHRSQKHKERIRLLRQKREAAARKKYNL-----LQDSSTSDSDLTCDSST 217
++G +K ++K KE+++ + K+ A ++K L+ + ++ D
Sbjct: 977 HKHGSKENLKREHTKKVKEKLKGKKDKKHKAPKRKQAFHWQPPLEFGEEEEEEID-DKQV 1035
Query: 218 SSSDDDEEVSGSSKTITAEI 237
+ +++VS +++TI I
Sbjct: 1036 TQESKEKKVSENNETIKDNI 1055
Score = 32.3 bits (72), Expect = 0.78
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 26/204 (12%)
Query: 30 EEDGSVELESQVQKDGVADSTVISSMPCLLMELR-RDSSESQLASTESDKPTTGRVYESD 88
+E GS + +K+ +D + S E R S S + + S T R S
Sbjct: 656 KETGSSSSYHKREKNSESDQSTYSKYSDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASS 715
Query: 89 SSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESE 148
S SPSS H + S + S + T++ D R RR RS +
Sbjct: 716 HSRS--RSPSSRSH--SRNKYSDHSQCSRSSSYTSISSDDGR-------RAKRRLRSSGK 764
Query: 149 TSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSD 208
++++ KK+ SS+ K + K ++R +R+ E+ + Y +SD
Sbjct: 765 KNSVSHKKHSSSSE-------KTLHSKYVKGRDRSSCVRKYSESRSSLDY-------SSD 810
Query: 209 SDLTCDSSTSSSDDDEEVSGSSKT 232
S+ + +T S+ + E+ +T
Sbjct: 811 SEQSSVQATQSAQEKEKQGQMERT 834
Score = 32.0 bits (71), Expect = 1.0
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 27/243 (11%)
Query: 63 RRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAET 122
R SS S + SD R SS++ +S S G A SS ++N S +
Sbjct: 720 RSPSSRSHSRNKYSDHSQCSR-----SSSYTSIS-SDDGRRAKRRLRSSGKKNSVSHKKH 773
Query: 123 AVEGDPS-------GVSGATVGRKSRRSRS------ESETSTMAAKKNRQSSDKQNGRVA 169
+ + + G ++ RK SRS +SE S++ A ++ Q +KQ G++
Sbjct: 774 SSSSEKTLHSKYVKGRDRSSCVRKYSESRSSLDYSSDSEQSSVQATQSAQEKEKQ-GQME 832
Query: 170 KVKGHRSQKHKERIRLLRQKREAAARKKYNL---LQDSSTSDSDLTCDSSTSSSDDDEEV 226
+ H Q+ + +RE KK L L D + S + S D E
Sbjct: 833 RT--HNKQEKNRGEEKSKSERECPHSKKRTLKENLSDHLRNGSKPKRKNYAGSKWDSESN 890
Query: 227 SGSSKTITAEIPDGPPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATW 286
S T ++ P + ++S+ EV + ++ + +N+ D GA W
Sbjct: 891 SERDVTKNSKNDSHPSSDKEEGEATSDSESEVSEI-HIKVKPTTKSSTNTSLPDDNGA-W 948
Query: 287 RTS 289
++S
Sbjct: 949 KSS 951
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 40.4 bits (93), Expect = 0.003
Identities = 53/241 (21%), Positives = 95/241 (39%), Gaps = 29/241 (12%)
Query: 21 KASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSS-ESQLASTESDKP 79
+ SE++ E D + +E +V+ D +S +S L + RRDS +SQ S E+
Sbjct: 272 RISEEDDRSELDDNNTME-EVKSDSTENS---NSRDTGLSQPRRDSKGDSQEDSKENLSQ 327
Query: 80 TTGRVYE---SDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA-- 134
+ + S+SS LS + + + +S + + P + VE S
Sbjct: 328 EESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEED 387
Query: 135 ---TVGRKSRRSRSE------SETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRL 185
T+ SR E SE+ + + D+ + ++ H S
Sbjct: 388 SSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAES----- 442
Query: 186 LRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSG---SSKTITAEIPDGPP 242
Q E+ + + + QDSS S D S SSS++D ++ S+ +T + P
Sbjct: 443 --QSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEIESRKLTVDAYHNKP 500
Query: 243 V 243
+
Sbjct: 501 I 501
Score = 33.5 bits (75), Expect = 0.35
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 11/158 (6%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
ES S QE + E V ES+ S V DSSE + T
Sbjct: 339 ESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDS-------DSSEEDSSHT 391
Query: 75 ESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA 134
S + R ++DS + L+ S + D SS++E S + +A S
Sbjct: 392 LSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEE 451
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVK 172
SRS+ ++++ +K SS +++G++ ++
Sbjct: 452 DDSDSQDSSRSKEDSNSTESK----SSSEEDGQLKNIE 485
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 40.4 bits (93), Expect = 0.003
Identities = 53/241 (21%), Positives = 95/241 (39%), Gaps = 29/241 (12%)
Query: 21 KASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSS-ESQLASTESDKP 79
+ SE++ E D + +E +V+ D +S +S L + RRDS +SQ S E+
Sbjct: 256 RISEEDDRSELDDNNTME-EVKSDSTENS---NSRDTGLSQPRRDSKGDSQEDSKENLSQ 311
Query: 80 TTGRVYE---SDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA-- 134
+ + S+SS LS + + + +S + + P + VE S
Sbjct: 312 EESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEED 371
Query: 135 ---TVGRKSRRSRSE------SETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRL 185
T+ SR E SE+ + + D+ + ++ H S
Sbjct: 372 SSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAES----- 426
Query: 186 LRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSG---SSKTITAEIPDGPP 242
Q E+ + + + QDSS S D S SSS++D ++ S+ +T + P
Sbjct: 427 --QSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEIESRKLTVDAYHNKP 484
Query: 243 V 243
+
Sbjct: 485 I 485
Score = 33.5 bits (75), Expect = 0.35
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 11/158 (6%)
Query: 15 ESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSESQLAST 74
ES S QE + E V ES+ S V DSSE + T
Sbjct: 323 ESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDS-------DSSEEDSSHT 375
Query: 75 ESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGA 134
S + R ++DS + L+ S + D SS++E S + +A S
Sbjct: 376 LSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEE 435
Query: 135 TVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVK 172
SRS+ ++++ +K SS +++G++ ++
Sbjct: 436 DDSDSQDSSRSKEDSNSTESK----SSSEEDGQLKNIE 469
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 40.4 bits (93), Expect = 0.003
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 69 SQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDP 128
SQ E + TG Y +D+S S ++ G DS T+ E+ + ++ + D
Sbjct: 499 SQGYKKEGREQGTGNSY-TDTSGPKETSSATPGR--DSKTIQKGSESGRGRQKSPAQSD- 554
Query: 129 SGVSGATVGRKSRRS-------------RSESETSTMAAKKNRQSSDKQNGRVAKVKGHR 175
S TVG+K + + ESET A S K A KG R
Sbjct: 555 STTQRRTVGKKQPKKAEKAAAEEPRGGLKIESETPVDLASSMPSSRHK-----AATKGSR 609
Query: 176 SQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLT-CDSSTSSSDDDEEVSGSSKT 232
K+ + R A +KKY SS ++ D+S+S SD+ E + SS+T
Sbjct: 610 KPNIKKESK--SSPRPTAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESLPPSSQT 665
Score = 28.9 bits (63), Expect = 8.7
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 19 PPKASEQETAKEE-DGSVELESQVQKDGV--ADSTVISSMPCLLMELRRDSSESQLASTE 75
P K S +K ++L S DG D T+ S P S S+ +
Sbjct: 367 PSKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTP---------GSNSEPSHHN 417
Query: 76 SDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSS-AEENEPSQA 120
S+ R DSS+H S SSSG ++S++ SS +E NEPSQ+
Sbjct: 418 SEGADNSR---DDSSSHSG-SESSSGSDSESESSSSDSEANEPSQS 459
Score = 28.9 bits (63), Expect = 8.7
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 20 PKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSES---QLASTES 76
PK +E+ A+E G +++ES+ D + SSMP + S + S S
Sbjct: 567 PKKAEKAAAEEPRGGLKIESETPVD------LASSMPSSRHKAATKGSRKPNIKKESKSS 620
Query: 77 DKPTT-GRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPS 118
+PT + Y+S S S S + ++DT SS + S
Sbjct: 621 PRPTAEKKKYKSTSK-----SSQKSREIIETDTSSSDSDESES 658
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 110 SSAEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVA 169
S +EE E S ++ D SG+ G + S E +++ +++ + D ++GR +
Sbjct: 677 SESEEEEDSSDSSS---DSESESGSESGEQGE-SGEEGDSNEDSSEDSSSEQDSESGRES 732
Query: 170 KVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSS-SDDDEEVSG 228
++ R+ K + + + + + DSS +S DSS+ S S+ + E
Sbjct: 733 GLENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESES 792
Query: 229 SSKTITAE 236
S+ +T E
Sbjct: 793 ESRRVTKE 800
Score = 34.3 bits (77), Expect = 0.21
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 10/146 (6%)
Query: 65 DSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAV 124
DSS + + S+ G E SN SSS ++S S E ++ +
Sbjct: 687 DSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKA 746
Query: 125 EGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIR 184
+G G KS+ S S ++ S+ + S + + E R
Sbjct: 747 KGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESES----------EPESESESRR 796
Query: 185 LLRQKREAAARKKYNLLQDSSTSDSD 210
+ ++K + + + L +D S D D
Sbjct: 797 VTKEKEKKTKQDRTPLTKDVSLLDLD 822
>gi|54633315 deoxynucleotidyltransferase, terminal, interacting
protein 2 [Homo sapiens]
Length = 756
Score = 39.7 bits (91), Expect = 0.005
Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 16/281 (5%)
Query: 64 RDSSESQLAS-TESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAET 122
R +S Q S +E +KP D +H SS L + + E Q
Sbjct: 242 RQTSHLQARSLSEINKPNFYNNDFDDDFSH----RSSENILTVHEQANVESLKETKQNCK 297
Query: 123 AVEGDPSGVS--GATVGRKSRRSRSESETSTMAAKK--NRQSSDKQNGRVAKVKGHRSQK 178
++ D +G++ G + KS + ++ SE + ++ +++ S QN V H +
Sbjct: 298 DLDEDANGITDEGKEINEKSSQLKNLSELQDTSLQQLVSQRHSTPQNKNAVSV--HSNLN 355
Query: 179 HKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEE---VSGSSKTITA 235
+ ++ L Q ++N + S SDLT SDD+EE +S S +
Sbjct: 356 SEAVMKSLTQTFATVEVGRWNNNKKSPIKASDLTKFGDCGGSDDEEESTVISVSEDMNSE 415
Query: 236 EIPDGPPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEEL 295
D Y + S + +V +L++ Q+ NS +DT SG E L
Sbjct: 416 GNVDFECDTKLYTSAPNTSQGKDNSVLLVLSSDESQQSENSENEEDTLCFVENSGQRESL 475
Query: 296 NAEAGHL--DPGFLASDKTSAGNAPLNEEINIASSDSEVEI 334
+ + G L D D T +A N + SEV I
Sbjct: 476 SGDTGSLSCDNALFVIDTTPGMSADKNFYLEEEDKASEVAI 516
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 39.7 bits (91), Expect = 0.005
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 65 DSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAV 124
DSS S S + +K R N S SS H ++S++ S ++ + S+ ET
Sbjct: 112 DSSSSSSDSEDEEKKQGKR--RKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEK 169
Query: 125 EGDPSGVSG----ATVGRKSRRSRSESETS---TMAAKKNRQSSDKQNGRVAKVKGHRSQ 177
E D +S + K S S SE+ + AKK R+ +++ + KVK + +
Sbjct: 170 EKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAK-EKVKKKKKK 228
Query: 178 KHKERIRLLRQKREAAARKK 197
+HK+ + ++K ++ + +
Sbjct: 229 QHKKHSKKKKKKSGSSHKSR 248
Score = 32.7 bits (73), Expect = 0.60
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 66 SSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVE 125
S E L+ ES R + + C S SSS SD+ SS+ ++E + +
Sbjct: 76 SREKLLSGNESSSKKRERKKKRKKKS-CRSSSSSSS----SDSSSSSSDSEDEEKKQ--- 127
Query: 126 GDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRL 185
G++ ++ ++ S S+ ++ +S K++ + K ++K K+ +R
Sbjct: 128 -----------GKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKD-VRS 175
Query: 186 LRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEE 225
L +KR+ + L +SS S+SD D EE
Sbjct: 176 LSKKRKKSYPDDKPLSSESS-SESDYEEDVQAKKKRRCEE 214
Score = 30.0 bits (66), Expect = 3.9
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 144 RSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLR------QKREAAARKK 197
+ + E +K + +K N + + + K R +LL +KRE ++K
Sbjct: 45 KKQLENKKTGSKALAEFEEKMN------ENWKKELEKSREKLLSGNESSSKKRERKKKRK 98
Query: 198 YNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSK 231
+ SS+S S DSS+SSSD ++E K
Sbjct: 99 KKSCRSSSSSSSS---DSSSSSSDSEDEEKKQGK 129
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 39.3 bits (90), Expect = 0.006
Identities = 58/255 (22%), Positives = 88/255 (34%), Gaps = 33/255 (12%)
Query: 10 VEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSES 69
+E+L S+A +A +++ D + E+ + S D E
Sbjct: 4 MEDLFGSDADSEAERKDSDSGSDSDSDQENAASGSNASGS-------------ESDQDER 50
Query: 70 QLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPS 129
+ S+K G E + ++H S H SD S A E + + DPS
Sbjct: 51 GDSGQPSNKELFGDDSEDEGASH---HSGSDNHSERSDNRSEASERSDHE-----DNDPS 102
Query: 130 GV---SGATVGR----KSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKER 182
V SG+ + RS S S + S D++ GR K Q E+
Sbjct: 103 DVDQHSGSEAPNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDK----SDQSDDEK 158
Query: 183 IRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPP 242
I+ E A + LQ+S + D D+E S+ A D P
Sbjct: 159 IQN-SDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDERP 217
Query: 243 VVAHYDMSDTNSDPE 257
V + D NSD E
Sbjct: 218 VASDNDDEKQNSDDE 232
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 38.9 bits (89), Expect = 0.008
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 32/185 (17%)
Query: 37 LESQVQKDGVADSTVISSMPCLLMELR-------------RDSSESQLASTESDKPTTGR 83
L S V +D A S V+SSMP E +D+ E + DK +
Sbjct: 1757 LASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEK 1816
Query: 84 VYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRS 143
+S + S SS H + T S +++ KS RS
Sbjct: 1817 KRDSSLRSRSKRSKSSE-HKSRKRTSESRSRARKRSSKS----------------KSHRS 1859
Query: 144 RSESETSTMAAKKNRQSSDKQNGR--VAKVKGHRSQKHKERIRLLRQKREAAARKKYNLL 201
++ S + + +++ +S K GR V+K K RS KH+ + R ++KR ++ + +
Sbjct: 1860 QTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVR 1919
Query: 202 QDSST 206
S T
Sbjct: 1920 ARSRT 1924
Score = 29.3 bits (64), Expect = 6.6
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 23/258 (8%)
Query: 9 KVEELIESEAPPKASEQETAKEEDGSVELES-QVQKDGVADSTVISSMPCLLMELRRDSS 67
K E+ + + P+ SE +T +DG+++LES K S V +P S
Sbjct: 122 KKEKEKKYKRQPEESESKTKSHDDGNIDLESDSFLKFDSEPSAVALELPTRAF---GPSE 178
Query: 68 ESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGD 127
++ + + P V S H + + + A+ +S++ +E S+ AV +
Sbjct: 179 TNESPAVVLEPPV---VSMEVSEPHILETLKPATKTAELSVVSTSVISEQSEQSVAVMPE 235
Query: 128 PS------GVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKE 181
PS + A V + +S TM+ + +S +K S +
Sbjct: 236 PSMTKILDSFAAAPVPTTTLVLKSSEPVVTMSVEYQMKS---------VLKSVESTSPEP 286
Query: 182 RIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIP-DG 240
+L + A + L SS + +++ + STS++ D E S E P D
Sbjct: 287 SKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDV 346
Query: 241 PPVVAHYDMSDTNSDPEV 258
P +A M+ PE+
Sbjct: 347 PSEIADSSMTRPQELPEL 364
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 38.9 bits (89), Expect = 0.008
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 32/185 (17%)
Query: 37 LESQVQKDGVADSTVISSMPCLLMELR-------------RDSSESQLASTESDKPTTGR 83
L S V +D A S V+SSMP E +D+ E + DK +
Sbjct: 1757 LASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEK 1816
Query: 84 VYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRS 143
+S + S SS H + T S +++ KS RS
Sbjct: 1817 KRDSSLRSRSKRSKSSE-HKSRKRTSESRSRARKRSSKS----------------KSHRS 1859
Query: 144 RSESETSTMAAKKNRQSSDKQNGR--VAKVKGHRSQKHKERIRLLRQKREAAARKKYNLL 201
++ S + + +++ +S K GR V+K K RS KH+ + R ++KR ++ + +
Sbjct: 1860 QTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVR 1919
Query: 202 QDSST 206
S T
Sbjct: 1920 ARSRT 1924
Score = 29.3 bits (64), Expect = 6.6
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 23/258 (8%)
Query: 9 KVEELIESEAPPKASEQETAKEEDGSVELES-QVQKDGVADSTVISSMPCLLMELRRDSS 67
K E+ + + P+ SE +T +DG+++LES K S V +P S
Sbjct: 122 KKEKEKKYKRQPEESESKTKSHDDGNIDLESDSFLKFDSEPSAVALELPTRAF---GPSE 178
Query: 68 ESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGD 127
++ + + P V S H + + + A+ +S++ +E S+ AV +
Sbjct: 179 TNESPAVVLEPPV---VSMEVSEPHILETLKPATKTAELSVVSTSVISEQSEQSVAVMPE 235
Query: 128 PS------GVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKE 181
PS + A V + +S TM+ + +S +K S +
Sbjct: 236 PSMTKILDSFAAAPVPTTTLVLKSSEPVVTMSVEYQMKS---------VLKSVESTSPEP 286
Query: 182 RIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIP-DG 240
+L + A + L SS + +++ + STS++ D E S E P D
Sbjct: 287 SKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDV 346
Query: 241 PPVVAHYDMSDTNSDPEV 258
P +A M+ PE+
Sbjct: 347 PSEIADSSMTRPQELPEL 364
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 38.9 bits (89), Expect = 0.008
Identities = 64/293 (21%), Positives = 104/293 (35%), Gaps = 46/293 (15%)
Query: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
+KME K EE E P K E+E KE++ E E + +K + +S
Sbjct: 97 IKME----KKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEK----EKATVSENVAASA 148
Query: 61 ELRRDSSESQLASTESDKPTTGRVYESDSS---------NHCMLSPSSSGHLADSDTLSS 111
++ +T PTT E S N +L S L D D S
Sbjct: 149 AATTPATSPPAVNTSPSVPTTTTATEEQVSEPKKWNLRRNRPLLDFVSMEELNDMDDYDS 208
Query: 112 AEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKV 171
++N+ +G + G E E S +N + +D+ + A
Sbjct: 209 EDDNDWRPTVVKRKGRS---ASQKEGSDGDNEDDEDEGSGSDEDENDEGNDEDHSSPASE 265
Query: 172 KGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDS---STSSSDDDEEVSG 228
G +KK +L +S D +LT DS S S S++D +
Sbjct: 266 GG-------------------CKKKKSKVLSRNSADDEELTNDSLTLSQSKSNEDSLILE 306
Query: 229 SSKTITAEIPDGPPVVAHYDMSDTNSD-PEVVNVDNLLAAAVVQEHSNSVGGQ 280
S+ +++ D ++ + D + D E++ DN V E V G+
Sbjct: 307 KSQNWSSQKMD-HILICCVCLGDNSEDADEIIQCDN--CGITVHEGCYGVDGE 356
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 38.9 bits (89), Expect = 0.008
Identities = 64/293 (21%), Positives = 104/293 (35%), Gaps = 46/293 (15%)
Query: 1 MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLM 60
+KME K EE E P K E+E KE++ E E + +K + +S
Sbjct: 97 IKME----KKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEK----EKATVSENVAASA 148
Query: 61 ELRRDSSESQLASTESDKPTTGRVYESDSS---------NHCMLSPSSSGHLADSDTLSS 111
++ +T PTT E S N +L S L D D S
Sbjct: 149 AATTPATSPPAVNTSPSVPTTTTATEEQVSEPKKWNLRRNRPLLDFVSMEELNDMDDYDS 208
Query: 112 AEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKV 171
++N+ +G + G E E S +N + +D+ + A
Sbjct: 209 EDDNDWRPTVVKRKGRS---ASQKEGSDGDNEDDEDEGSGSDEDENDEGNDEDHSSPASE 265
Query: 172 KGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDS---STSSSDDDEEVSG 228
G +KK +L +S D +LT DS S S S++D +
Sbjct: 266 GG-------------------CKKKKSKVLSRNSADDEELTNDSLTLSQSKSNEDSLILE 306
Query: 229 SSKTITAEIPDGPPVVAHYDMSDTNSD-PEVVNVDNLLAAAVVQEHSNSVGGQ 280
S+ +++ D ++ + D + D E++ DN V E V G+
Sbjct: 307 KSQNWSSQKMD-HILICCVCLGDNSEDADEIIQCDN--CGITVHEGCYGVDGE 356
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 38.5 bits (88), Expect = 0.011
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 65 DSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAV 124
DSS S S + DK R + + +H S SS +SD+ S ++ + S+ T
Sbjct: 103 DSSSSSSDSEDEDKKQGKRRKKKKNRSH--KSSESSMSETESDSKDSLKKKKKSKDGTEK 160
Query: 125 EGDPSGVSGATVGRK--------SRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRS 176
E D + G + RK S S SESE K ++SS+++ K K +
Sbjct: 161 EKD---IKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTK--KK 215
Query: 177 QKHKERIRLLRQKREAAA 194
+KHK+ + ++K++AA+
Sbjct: 216 KKHKKHSK--KKKKKAAS 231
Score = 28.9 bits (63), Expect = 8.7
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 128 PSGVSGATVGRKSRRSRSESETSTMAAKKNRQSS-------DKQNGRVAKVKGHRSQKHK 180
P SG T+ R R E +K ++ S +K N K +KH+
Sbjct: 12 PIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKK----ELEKHR 67
Query: 181 ERI------RLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSK 231
E++ +++R+ +KK SS+S SD + SS+S S+D+++ G +
Sbjct: 68 EKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSS--SSSSDSEDEDKKQGKRR 122
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 38.5 bits (88), Expect = 0.011
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 65 DSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAV 124
DSS S S + DK R + + +H S SS +SD+ S ++ + S+ T
Sbjct: 113 DSSSSSSDSEDEDKKQGKRRKKKKNRSH--KSSESSMSETESDSKDSLKKKKKSKDGTEK 170
Query: 125 EGDPSGVSGATVGRK--------SRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRS 176
E D + G + RK S S SESE K ++SS+++ K K +
Sbjct: 171 EKD---IKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTK--KK 225
Query: 177 QKHKERIRLLRQKREAAA 194
+KHK+ + ++K++AA+
Sbjct: 226 KKHKKHSK--KKKKKAAS 241
Score = 28.9 bits (63), Expect = 8.7
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 128 PSGVSGATVGRKSRRSRSESETSTMAAKKNRQSS-------DKQNGRVAKVKGHRSQKHK 180
P SG T+ R R E +K ++ S +K N K +KH+
Sbjct: 22 PIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKK----ELEKHR 77
Query: 181 ERI------RLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSK 231
E++ +++R+ +KK SS+S SD + SS+S S+D+++ G +
Sbjct: 78 EKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSS--SSSSDSEDEDKKQGKRR 132
>gi|21361684 G patch domain containing 1 [Homo sapiens]
Length = 931
Score = 38.5 bits (88), Expect = 0.011
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 34/238 (14%)
Query: 2 KMEEAVGKVEELIESEA-PPKASEQETA-KEEDGSVELESQ--VQKDGVADSTVISSMPC 57
K E+++ + L S+A PPK KEE+ + EL + V KD A + S P
Sbjct: 691 KKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPS 750
Query: 58 LLM---------ELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDT 108
+ + + + SSE + +E D+ +G S + + SS H
Sbjct: 751 MDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHAL---- 806
Query: 109 LSSAEENEPS---QAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQN 165
+ + +E PS Q E + G V + R E +K++++ DK
Sbjct: 807 VPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQK----EKHKKNKDKHK 862
Query: 166 GRVAKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDD 223
+ K HR +K K++ +K + ++K + SS+S+S DSS S SD++
Sbjct: 863 AK----KEHRRKKEKKK---KHRKHKHKGKQKNKKPEKSSSSESS---DSSDSQSDEE 910
Score = 28.9 bits (63), Expect = 8.7
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 117 PSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQ-NGRVAKVKGHR 175
P A T+ V + G+ + + S+ A+K+ + G V
Sbjct: 379 PMVAATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAELLGETPIQGSATSVLEFL 438
Query: 176 SQKHKERIRLLRQKRE--AAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTI 233
SQK KERI+ ++Q + AA K +L Q++ +S + L+ ++ + + G + T+
Sbjct: 439 SQKDKERIKEMKQATDLKAAQLKARSLAQNAQSSRAQLSPAAAAGHCSWNMALGGGTATL 498
Query: 234 TA 235
A
Sbjct: 499 KA 500
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 38.5 bits (88), Expect = 0.011
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 39/280 (13%)
Query: 4 EEAVGKVEELIESEAPPKASEQETAKEEDG-------------SVELESQVQKDGVADST 50
EE G + I P ++ +QE A EDG V++ESQ + G D+
Sbjct: 50 EETKGTAGKAINEGPPTESGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKEDAE 109
Query: 51 VISSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLS 110
EL+++ E + +T + TGR E+ S S+ LA +
Sbjct: 110 A---------ELKKEDGEKE-ETTVGSQEMTGRKEETKSEPKEAEEKEST--LASEKQKA 157
Query: 111 SAEENEPSQAETAVEGD-PSGVSGATVGRKSRRSRSESET------STMAAKKNRQSSDK 163
+E +P + A D ATV + ++ S+ ET ST +K K
Sbjct: 158 EEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAK 217
Query: 164 QNGRVAKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDS-STSDSDLTCDSSTSSSDD 222
+ A V+ + KE +++ + A+++ + +++ +++ S D
Sbjct: 218 AESQKAVVEDEAKAEPKEPDG--KEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDV 275
Query: 223 DEEVSGSSKTITA---EIPDGPPVVAHYDMSDTNSDPEVV 259
++E G + I + E P+ P H ++S P+ V
Sbjct: 276 EKEPEGGAGVIPSSPEEWPESPTGEGH-NLSTDGLGPDCV 314
>gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
Length = 582
Score = 37.7 bits (86), Expect = 0.019
Identities = 40/208 (19%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 24 EQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSE-SQLASTESDKPTTG 82
E++ K++ G ++ E +Q ++ S+ M+ R +SE S + STE K +
Sbjct: 217 EKKKKKKKKGRMKKEDNIQAK--EENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
Query: 83 RVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRR 142
+ + D L +G S + + S+ + ++ D + +++
Sbjct: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKD--------IIKEASE 326
Query: 143 SRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKER---------IRLLRQKREAA 193
+ E+ ++ ++ + + D ++ + K K +KHKER +R+L +
Sbjct: 327 ASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMD 386
Query: 194 ARKKYNLLQDSSTSDSDLTCDSSTSSSD 221
+K+Y LQ +S + T S S+
Sbjct: 387 LKKEYLALQKASMASLKKTISQIKSESE 414
Score = 32.3 bits (72), Expect = 0.78
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 138 RKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAARKK 197
+K ++ R + E + A ++N +S N ++K+K R I +++ + +KK
Sbjct: 221 KKKKKGRMKKEDNIQAKEENMDTS---NTSISKMKRSRPTSEGSDIESTEPQKQCSKKKK 277
Query: 198 YNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSK 231
++S+ T SSS+D E ++ SK
Sbjct: 278 KRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSK 311
>gi|109809741 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
Length = 582
Score = 37.7 bits (86), Expect = 0.019
Identities = 40/208 (19%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 24 EQETAKEEDGSVELESQVQKDGVADSTVISSMPCLLMELRRDSSE-SQLASTESDKPTTG 82
E++ K++ G ++ E +Q ++ S+ M+ R +SE S + STE K +
Sbjct: 217 EKKKKKKKKGRMKKEDNIQAK--EENMDTSNTSISKMKRSRPTSEGSDIESTEPQKQCSK 274
Query: 83 RVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRR 142
+ + D L +G S + + S+ + ++ D + +++
Sbjct: 275 KKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKD--------IIKEASE 326
Query: 143 SRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKER---------IRLLRQKREAA 193
+ E+ ++ ++ + + D ++ + K K +KHKER +R+L +
Sbjct: 327 ASKENRDIEISTEEEKDTGDLKDSSLLKTKRKHKKKHKERHKMGEEVIPLRVLSKSEWMD 386
Query: 194 ARKKYNLLQDSSTSDSDLTCDSSTSSSD 221
+K+Y LQ +S + T S S+
Sbjct: 387 LKKEYLALQKASMASLKKTISQIKSESE 414
Score = 32.3 bits (72), Expect = 0.78
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 138 RKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAARKK 197
+K ++ R + E + A ++N +S N ++K+K R I +++ + +KK
Sbjct: 221 KKKKKGRMKKEDNIQAKEENMDTS---NTSISKMKRSRPTSEGSDIESTEPQKQCSKKKK 277
Query: 198 YNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSK 231
++S+ T SSS+D E ++ SK
Sbjct: 278 KRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSK 311
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 37.7 bits (86), Expect = 0.019
Identities = 70/336 (20%), Positives = 123/336 (36%), Gaps = 35/336 (10%)
Query: 66 SSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVE 125
S+ S AST ++ ++ E+ ++ + S +SSG S +S S+A TA
Sbjct: 141 STTSSGASTATNSDSSTTSSEASTATNSESSTTSSG---ASTATNSESSTVSSRASTATN 197
Query: 126 GDPSGVSGATVGRKSRRSRSESETSTMAA--KKNRQSSDKQNGRVAKVKGHRSQKHKERI 183
+ S S S + SES T++ A N +SS +G S
Sbjct: 198 SESSTTSSGA----STATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAG 253
Query: 184 RLLRQKREAAARKKYNLL-QDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPP 242
+ + +SST S ++ +++ SS + ++ + ++ G
Sbjct: 254 TATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGAN 313
Query: 243 VVAHYDMSDTNS------DPEVVNVDNLLAAAVVQEHSNSVGGQDT----GATWRTSGLL 292
+ D S T+S + E + + A E S + G T G++ +SG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTS 373
Query: 293 EELNAEAGHLDPGFL------ASDKTSAGNAPLNEEINIASSDSEV----EIVGVQEHAR 342
N+E+ + G +S +S + N E + SS + E A
Sbjct: 374 TATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGAN 433
Query: 343 CVHPRGGVIQSVSSWKHGSGTQYVSTRQTQSWTAVT 378
G + S GSGT ++ T S +A T
Sbjct: 434 TATNSGSSVTSA-----GSGTAALTGMHTTSHSAST 464
Score = 37.0 bits (84), Expect = 0.032
Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 15/263 (5%)
Query: 66 SSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSAEENEPSQAETAVE 125
S S ++ES P++G ++S + S +S+ +DS T SS E S A +
Sbjct: 115 SGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSS----EASTATNSES 170
Query: 126 GDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVAKVKGHRSQKHKERIRL 185
S SGA+ S S S ST A + S+ A R+ +
Sbjct: 171 STTS--SGASTATNSESSTVSSRAST--ATNSESSTTSSGASTATNSESRTTSNGAGTAT 226
Query: 186 LRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVA 245
+ ++ +SST S +++ SS ++ + ++ + G V
Sbjct: 227 NSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVT 286
Query: 246 HYDMSDTNSDPEVVNVDNLLAAAVVQEHSNSVGGQDTGATWRTSGLLEELNAEAGHLDPG 305
+ + S +S N ++ +N+ D+ T +SG N+E+ G
Sbjct: 287 NSESSTPSSG---ANTATNSESSTTSSGANTATNSDSSTT--SSGASTATNSESSTTSSG 341
Query: 306 FLASDKTSAGNAPLNEEINIASS 328
AS T++ ++ + + A++
Sbjct: 342 --ASTATNSESSTTSSGASTATN 362
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.302 0.119 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,325,322
Number of Sequences: 37866
Number of extensions: 678306
Number of successful extensions: 4394
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 3165
Number of HSP's gapped (non-prelim): 983
length of query: 404
length of database: 18,247,518
effective HSP length: 105
effective length of query: 299
effective length of database: 14,271,588
effective search space: 4267204812
effective search space used: 4267204812
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.