Guide to the Human Genome
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Name: AK3L1 Sequence: fasta or formatted (223aa) NCBI GI: 53832001
Description:

adenylate kinase 3-like 1 isoform 7

Referenced in:

Mitochondria
Nucleotide Pathways

Other entries for this name:
alt mRNA [223aa] adenylate kinase 3-like 1 isoform 5
alt mRNA [223aa] adenylate kinase 3-like 1 isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         12           2
 C cysteine            0.9          2           1
 D aspartate           4.9         11           2
 E glutamate           6.7         15           1
 F phenylalanine       3.1          7           1
 G glycine             6.7         15           1
 H histidine           3.6          8           1
 I isoleucine          6.3         14           1
 K lysine              6.3         14           1
 L leucine            10.8         24           2
 M methionine          1.8          4           2
 N asparagine          3.6          8           1
 P proline             6.3         14           2
 Q glutamine           4.9         11           2
 R arginine            6.3         14           2
 S serine              6.3         14           2
 T threonine           4.5         10           1
 V valine              7.2         16           1
 W tryptophan          1.3          3           1
 Y tyrosine            3.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenylate kinase 3-like 1 isoform 7 
AK3L1                 1.000   adenylate kinase 3-like 1 isoform 5 
AK3L1                 1.000   adenylate kinase 3-like 1 isoform 6 
AK3                   0.592   adenylate kinase 3 
AK2                   0.305   adenylate kinase 2 isoform a 
AK2                   0.305   adenylate kinase 2 isoform b 
C9orf98               0.156   putative adenylate kinase-like protein C9orf98 [Homo...
AK1                   0.145   adenylate kinase 1 
AK5                   0.145   adenylate kinase 5 isoform 1 
AK5                   0.145   adenylate kinase 5 isoform 2 
CMPK1                 0.133   UMP-CMP kinase 1 isoform a 
AKD1                  0.084   adenylate kinase domain containing 1 isoform 1 [Hom...
AKD1                  0.077   adenylate kinase domain containing 1 isoform 2 [Homo...
AK7                   0.044   adenylate kinase 7 
SPEF2                 0.030   KPL2 protein isoform 1 
CMPK1                 0.023   UMP-CMP kinase 1 isoform b 
SYTL5                 0.016   synaptotagmin-like 5 isoform 1 
SYTL5                 0.016   synaptotagmin-like 5 isoform 2 
SYTL5                 0.016   synaptotagmin-like 5 isoform 1 
KATNAL1               0.014   katanin p60 subunit A-like 1 
KATNAL1               0.014   katanin p60 subunit A-like 1 
SPTAN1                0.009   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.009   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
KATNA1                0.009   katanin p60 subunit A 1 
TAF9                  0.009   TAF9 RNA polymerase II, TATA box binding protein-asso...
BMS1                  0.007   BMS1-like, ribosome assembly protein 
CSF2RB                0.007   colony stimulating factor 2 receptor, beta precursor ...
PSMC6                 0.007   proteasome 26S ATPase subunit 6 
NLRC4                 0.007   caspase recruitment domain protein 12 
TRIP13                0.007   thyroid hormone receptor interactor 13 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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