Guide to the Human Genome
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Name: NFKBIL1 Sequence: fasta or formatted (366aa) NCBI GI: 222352175
Description:

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {381aa} nuclear factor of kappa light polypeptide gene enhancer in B-cell...
alt prot {358aa} nuclear factor of kappa light polypeptide gene enhancer in B-cell...
alt prot {343aa} nuclear factor of kappa light polypeptide gene enhancer in B-cell...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         44           3
 C cysteine            1.6          6           1
 D aspartate           4.9         18           2
 E glutamate          10.1         37           5
 F phenylalanine       2.2          8           2
 G glycine             7.4         27           3
 H histidine           3.0         11           1
 I isoleucine          0.8          3           1
 K lysine              2.5          9           1
 L leucine             8.5         31           3
 M methionine          1.4          5           1
 N asparagine          0.8          3           1
 P proline             8.2         30           3
 Q glutamine           7.4         27           4
 R arginine           13.9         51           2
 S serine              6.8         25           2
 T threonine           2.5          9           1
 V valine              2.7         10           1
 W tryptophan          2.5          9           1
 Y tyrosine            0.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of kappa light polypeptide gene enha... 
NFKBIL1               0.986   nuclear factor of kappa light polypeptide gene enha...
NFKBIL1               0.937   nuclear factor of kappa light polypeptide gene enha...
NFKBIL1               0.923   nuclear factor of kappa light polypeptide gene enha...
TCHH                  0.033   trichohyalin 
MAP7                  0.033   microtubule-associated protein 7 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 3 
NFKB2                 0.030   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.030   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.030   nuclear factor of kappa light polypeptide gene enha...
TNIK                  0.030   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.030   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.030   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.030   TRAF2 and NCK interacting kinase isoform 1 
BAT2D1                0.030   HBxAg transactivated protein 2 
LOC100288837          0.030   PREDICTED: hypothetical protein XP_002343931, parti...
EIF3A                 0.029   eukaryotic translation initiation factor 3, subunit 1...
LOC100286959          0.027   PREDICTED: hypothetical protein XP_002343921 
CALD1                 0.027   caldesmon 1 isoform 1 
INCENP                0.027   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.027   inner centromere protein antigens 135/155kDa isofor...
LOC400352             0.027   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.027   PREDICTED: similar to Putative golgin subfamily A m...
PPP1R12B              0.026   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.026   protein phosphatase 1, regulatory (inhibitor) subunit...
LOC100133599          0.026   PREDICTED: hypothetical protein 
LOC100133599          0.026   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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