Guide to the Human Genome
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Name: FLCN Sequence: fasta or formatted (342aa) NCBI GI: 21389403
Description:

folliculin isoform 2

Referenced in:

Kidney

Other entries for this name:
alt prot [579aa] folliculin isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         26           2
 C cysteine            3.5         12           1
 D aspartate           3.2         11           2
 E glutamate           7.6         26           4
 F phenylalanine       4.7         16           2
 G glycine             9.1         31           2
 H histidine           4.1         14           1
 I isoleucine          4.4         15           2
 K lysine              3.2         11           2
 L leucine             9.6         33           2
 M methionine          2.3          8           2
 N asparagine          2.9         10           1
 P proline             6.7         23           2
 Q glutamine           5.0         17           1
 R arginine            5.6         19           1
 S serine              8.8         30           3
 T threonine           4.4         15           1
 V valine              3.8         13           1
 W tryptophan          2.3          8           1
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   folliculin isoform 2 
FLCN                  0.835   folliculin isoform 1 
ZNF446                0.013   zinc finger protein 446 
MUC4                  0.010   mucin 4 isoform a 
MUC4                  0.010   mucin 4 isoform e 
MUC4                  0.010   mucin 4 isoform d 
LRRC68                0.010   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.010   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.010   PREDICTED: leucine rich repeat containing 68 
LRRTM4                0.010   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.010   leucine rich repeat transmembrane neuronal 4 isofor...
ZBTB41                0.010   zinc finger and BTB domain containing 41 
FAM170A               0.009   family with sequence similarity 170, member A [Homo...
GORASP1               0.009   Golgi reassembly stacking protein 1 
SIX4                  0.009   sine oculis homeobox homolog 4 
GTF3C1                0.007   general transcription factor IIIC, polypeptide 1, a...
ZNF213                0.007   zinc finger protein 213 
ZNF213                0.007   zinc finger protein 213 
TBR1                  0.007   T-box, brain, 1 
PER1                  0.007   period 1 
PRSS36                0.007   protease, serine, 36 
UBE2Q2                0.006   ubiquitin-conjugating enzyme E2Q 2 isoform 2 
UBE2Q2                0.006   ubiquitin-conjugating enzyme E2Q 2 isoform 1 
RPGR                  0.006   retinitis pigmentosa GTPase regulator isoform C [Hom...
TMEM59                0.006   thymic dendritic cell-derived factor 1 
TIMELESS              0.006   timeless homolog 
PPRC1                 0.006   peroxisome proliferator-activated receptor gamma, co...
SUV420H1              0.006   suppressor of variegation 4-20 homolog 1 isoform 2 [...
SUV420H1              0.006   suppressor of variegation 4-20 homolog 1 isoform 1 [...
CTR9                  0.006   SH2 domain binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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