Guide to the Human Genome
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Name: TMEM59 Sequence: fasta or formatted (323aa) NCBI GI: 20070191
Description:

thymic dendritic cell-derived factor 1

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         24           2
 C cysteine            3.7         12           2
 D aspartate           4.3         14           2
 E glutamate           7.4         24           3
 F phenylalanine       3.7         12           1
 G glycine             4.6         15           2
 H histidine           2.5          8           1
 I isoleucine          3.1         10           1
 K lysine              3.4         11           1
 L leucine            13.6         44           4
 M methionine          3.4         11           2
 N asparagine          2.8          9           1
 P proline             4.6         15           2
 Q glutamine           5.9         19           1
 R arginine            4.0         13           1
 S serine              9.9         32           2
 T threonine           5.9         19           3
 V valine              4.6         15           3
 W tryptophan          1.5          5           1
 Y tyrosine            3.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thymic dendritic cell-derived factor 1 
TMEM59L               0.207   brain-specific membrane-anchored protein precursor [H...
LOC100292811          0.011   PREDICTED: similar to proprotein convertase subtili...
LOC100290671          0.011   PREDICTED: hypothetical protein XP_002347099 
LOC100289618          0.011   PREDICTED: hypothetical protein XP_002342982 
RAD50                 0.011   RAD50 homolog isoform 2 
RAD50                 0.011   RAD50 homolog isoform 1 
PLEKHA2               0.011   pleckstrin homology domain containing, family A (ph...
TPM3                  0.008   tropomyosin 3 isoform 3 
TPM3                  0.008   tropomyosin 3 isoform 2 
GABRA5                0.008   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
C14orf145             0.008   hypothetical protein LOC145508 
FLCN                  0.006   folliculin isoform 2 
FLCN                  0.006   folliculin isoform 1 
LZTR1                 0.005   leucine-zipper-like transcription regulator 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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