Search of human proteins with 21361884

Search of human proteins with 21361884

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
         (216 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    434   e-122
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           364   e-101
gi|254281345 RAB2B protein isoform 2 [Homo sapiens]                   340   4e-94
gi|19923483 GTPase Rab14 [Homo sapiens]                               244   3e-65
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          224   6e-59
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         218   2e-57
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           197   4e-51
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        192   2e-49
gi|16933567 mel transforming oncogene [Homo sapiens]                  191   4e-49
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 190   9e-49
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           185   3e-47
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   183   8e-47
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]         183   1e-46
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   182   2e-46
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            182   2e-46
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            182   2e-46
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      181   4e-46
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          181   4e-46
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]          180   7e-46
gi|50234889 RAB43 protein [Homo sapiens]                              175   3e-44
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   174   4e-44
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]          173   1e-43
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   172   2e-43
gi|116812567 RAB25 [Homo sapiens]                                     168   4e-42
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          168   4e-42
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         167   5e-42
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          167   5e-42
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]           158   4e-39
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           156   1e-38
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...   155   2e-38

>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  434 bits (1115), Expect = e-122
 Identities = 216/216 (100%), Positives = 216/216 (100%)

Query: 1   MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
           MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW
Sbjct: 1   MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120

Query: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
           SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180

Query: 181 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
           EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  364 bits (934), Expect = e-101
 Identities = 182/218 (83%), Positives = 196/218 (89%), Gaps = 8/218 (3%)

Query: 1   MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
           M YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDGKQIKLQIW
Sbjct: 1   MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLT+WLEDARQHS+SNMVIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120

Query: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
           SDLESRR+VK+EEGEAFAREHGLIFMETSAKTA NVEEAFINTAKEIY KIQ+G+FD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180

Query: 181 EANGIKIGPQQSI--STSVGPSASQRNSRDIGSNSGCC 216
           EANGIKIGPQ +   +T  G    Q+      +  GCC
Sbjct: 181 EANGIKIGPQHAATNATHAGNQGGQQ------AGGGCC 212


>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
          Length = 170

 Score =  340 bits (873), Expect = 4e-94
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 47  MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 106
           MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ
Sbjct: 1   MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60

Query: 107 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 166
           HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE
Sbjct: 61  HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120

Query: 167 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
           IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
Sbjct: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 170


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  244 bits (624), Expect = 3e-65
 Identities = 121/213 (56%), Positives = 155/213 (72%), Gaps = 7/213 (3%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R++ + G++IKLQIWDT
Sbjct: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR  ++ N VI+LIGNK+D
Sbjct: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEA 182
           LE++RDV  EE + FA E+GL+F+E SAKT  NVE+AF+  AK+IY+ IQ G  D++   
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187

Query: 183 NGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC 215
           +G++  P         P   +  S       GC
Sbjct: 188 SGVQHKPS-------APQGGRLTSEPQPQREGC 213


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  224 bits (570), Expect = 6e-59
 Identities = 109/187 (58%), Positives = 143/187 (76%)

Query: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
           TY +LFK+++IG+ G GKSCLL QF +K+F+   + TIGVEFG++++N+ GK +KLQIWD
Sbjct: 9   TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
           TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LT+WL DAR  +S N+VI+L GNK 
Sbjct: 69  TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128

Query: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
           DL++ R+V   E   FA+E+ L+F+ETSA T  NVEEAF+  A++I  KI+ G  D    
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188

Query: 182 ANGIKIG 188
            +GI+ G
Sbjct: 189 GSGIQYG 195


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  218 bits (556), Expect = 2e-57
 Identities = 108/187 (57%), Positives = 137/187 (73%)

Query: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
           TY +LFK+++IG  G GKSCLL QF + +F+   + TIGVEFG+R+VN+ GK +KLQIWD
Sbjct: 4   TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
           TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR  +S N+V++L GNK 
Sbjct: 64  TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123

Query: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
           DL+  R+V   E   FA+E+ L+F+ETSA T  NVEEAF+  A+ I  KI  G  D    
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183

Query: 182 ANGIKIG 188
            +GI+ G
Sbjct: 184 GSGIQYG 190


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  197 bits (502), Expect = 4e-51
 Identities = 93/197 (47%), Positives = 140/197 (71%), Gaps = 2/197 (1%)

Query: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
           TY YLFK ++IGD+GVGK+CLL +F++  F      TIG++F  R + +DGK+IKLQIWD
Sbjct: 4   TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
           TAGQE FR+IT +YYRGA G +LVYDIT  ++F+++ +W+ +  +H+SS++  M++GNK 
Sbjct: 64  TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123

Query: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
           D+  +R V +E GE  A ++G+ F+ETSAK++ NVEEAF   A++I  K+ + + D ++ 
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSA 183

Query: 182 ANG--IKIGPQQSISTS 196
             G  +KI   +S  TS
Sbjct: 184 GAGGPVKITENRSKKTS 200


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  192 bits (488), Expect = 2e-49
 Identities = 96/171 (56%), Positives = 120/171 (70%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +DGK IK QIWDT
Sbjct: 8   YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R H+ SN+VIML+GNKSD
Sbjct: 68  AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 173
           L   R V  +E  AFA ++ L F+ETSA  + NVEEAF N   EIYR + Q
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  191 bits (485), Expect = 4e-49
 Identities = 91/197 (46%), Positives = 134/197 (68%), Gaps = 2/197 (1%)

Query: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
           TY YLFK ++IGD+GVGK+C+L +F++  F      TIG++F  R + +DGK+IKLQIWD
Sbjct: 4   TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
           TAGQE FR+IT +YYRGA G +LVYDIT  ++F+++ +W+ +  +H+S+++  M++GNK 
Sbjct: 64  TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKC 123

Query: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL--FDVH 179
           D+  +R V +E GE  A ++G+ FMETSAK   NVE AF   A++I  K+ + L      
Sbjct: 124 DVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183

Query: 180 NEANGIKIGPQQSISTS 196
               G+KI P Q   +S
Sbjct: 184 GSNQGVKITPDQQKRSS 200


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  190 bits (482), Expect = 9e-49
 Identities = 95/171 (55%), Positives = 119/171 (69%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +DGK IK QIWDT
Sbjct: 8   YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R H+ SN+VIML+GNKSD
Sbjct: 68  AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 173
           L   R V  +E  AFA ++GL F+ETSA  + NVE AF     EIYR + Q
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 178


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  185 bits (469), Expect = 3e-47
 Identities = 81/168 (48%), Positives = 130/168 (77%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R V+I+GK+IKLQ+WDT
Sbjct: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  ++++S+ +  +L+GNK D
Sbjct: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
           +E++R V++E+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  183 bits (465), Expect = 8e-47
 Identities = 90/185 (48%), Positives = 129/185 (69%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R + +DGK IKLQIWDT
Sbjct: 8   YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE FR+IT SYYRGA G ++VYD+T +E+FN++  WL++  +++S N+  +L+GNK D
Sbjct: 68  AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEA 182
           L +++ V     + FA   G+ F+ETSAK A NVE++F+  A EI +++  G      E 
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187

Query: 183 NGIKI 187
           + +KI
Sbjct: 188 SNVKI 192


>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
          Length = 213

 Score =  183 bits (464), Expect = 1e-46
 Identities = 89/188 (47%), Positives = 132/188 (70%), Gaps = 2/188 (1%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNID-GKQIKLQIWD 61
           + Y F+ I+IGD+ VGKSCL+ +FT+ RF  V D T+GV+F +R+V I+ GK+IKLQIWD
Sbjct: 5   WLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWD 64

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-SSSNMVIMLIGNK 120
           TAGQE FRSITR+YYR + G LL++DIT R +F ++  WLE+ + H     +V +L+G+K
Sbjct: 65  TAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHK 124

Query: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
            DL+++R V R E E  A  +G+ ++ETSA+ A NVE+AF +  ++IY  +++G   +  
Sbjct: 125 CDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184

Query: 181 EANGIKIG 188
              G+K G
Sbjct: 185 GWEGVKSG 192


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  182 bits (462), Expect = 2e-46
 Identities = 80/168 (47%), Positives = 128/168 (76%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R V+I+GK+IKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE F++IT +YYRGA G +L YDIT  ++F ++ +W++   +++S+ +  +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
           +E++R V++E+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  182 bits (462), Expect = 2e-46
 Identities = 80/168 (47%), Positives = 128/168 (76%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R V+I+GK+IKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE F++IT +YYRGA G +L YDIT  ++F ++ +W++   +++S+ +  +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
           +E++R V++E+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  182 bits (462), Expect = 2e-46
 Identities = 80/168 (47%), Positives = 128/168 (76%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R V+I+GK+IKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE F++IT +YYRGA G +L YDIT  ++F ++ +W++   +++S+ +  +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
           +E++R V++E+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  181 bits (459), Expect = 4e-46
 Identities = 84/169 (49%), Positives = 121/169 (71%)

Query: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
           TY  LFK ++IGD+GVGK+C+L +F+D  F      TIG++F  + V + GK+IKLQIWD
Sbjct: 5   TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
           TAGQE F +IT SYYRGA G +LVYDIT  ++F +++ WL +  +H++ ++  ML+GNK 
Sbjct: 65  TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124

Query: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
           D++ +R V + +G   AREHG+ F ETSAK   N+E+AF+  A++I RK
Sbjct: 125 DMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  181 bits (459), Expect = 4e-46
 Identities = 87/172 (50%), Positives = 124/172 (72%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R + +DGK IKLQIWDT
Sbjct: 5   YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE FR+IT SYYRGA G ++VYD+T +E++ ++  WL++  +++S N+  +L+GNKSD
Sbjct: 65  AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQG 174
           L +++ V     + FA   G+ F+ETSAK A NVE+AF+  A EI +++  G
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 176


>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  180 bits (457), Expect = 7e-46
 Identities = 93/192 (48%), Positives = 131/192 (68%), Gaps = 6/192 (3%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMVNID-GKQIKL 57
           + Y F+ I+IGD+ VGKSCLL +FT  RF     P  D T+GV+F +R++ I+ GK+IKL
Sbjct: 5   WIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKL 64

Query: 58  QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-SSSNMVIML 116
           Q+WDTAGQE FRSITRSYYR + G  LV+DIT R +F H+  WLE+A+ +     +V +L
Sbjct: 65  QLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRIVFLL 124

Query: 117 IGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLF 176
           +G+K DL S+R V REE E  + + G+ ++ETSAK A NVEE+F    ++IY  I++G  
Sbjct: 125 VGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIKKGEI 184

Query: 177 DVHNEANGIKIG 188
            + +   G+K G
Sbjct: 185 CIQDGWEGVKSG 196


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  175 bits (443), Expect = 3e-44
 Identities = 92/214 (42%), Positives = 130/214 (60%), Gaps = 19/214 (8%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y +LFK +++GD  VGK+C++ +F    F      TIGV+F  + + I GK++KLQIWDT
Sbjct: 15  YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE FR+IT+SYYR A GA+L YDIT+R +F  +  W+ED R+++ SN+V +LIGNKSD
Sbjct: 75  AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134

Query: 123 LESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
           L   R+V   E ++ A  + ++  +ETSAK + NVEEAF+  A E+  +    LF     
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLF----- 189

Query: 182 ANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC 215
                        +   P   Q NS+DIG   GC
Sbjct: 190 -------------SEKSPDHIQLNSKDIGEGWGC 210


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  174 bits (442), Expect = 4e-44
 Identities = 81/167 (48%), Positives = 121/167 (72%), Gaps = 1/167 (0%)

Query: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF-QPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
           +Y    K +++GDTGVGK+C L+QF D  F       T+G++F  ++V +DG ++KLQIW
Sbjct: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
           DTAGQE FRS+T +YYR A   LL+YDIT + +F+++ +WL +  +++  ++VIML+GNK
Sbjct: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144

Query: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
           +D+ S R ++ E+GE  ARE+G+ F+ETSAKT  NVE AF+  AKE+
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score =  173 bits (438), Expect = 1e-43
 Identities = 91/187 (48%), Positives = 129/187 (68%), Gaps = 8/187 (4%)

Query: 8   KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67
           K +IIG++GVGKS LLL+FTD  F P    TIGV+F  + +++DG + KL IWDTAGQE 
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69

Query: 68  FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVI-MLIGNKSDLESR 126
           FR++T SYYRGA G +LVYD+TRR+TF  L +WL +   + + N ++ ML+GNK D E+ 
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN- 128

Query: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ--GLFDVHNEANG 184
           R+V R EG  FAR+H ++F+E SAKT   V+ AF    +E+  KI Q  GL++  N+  G
Sbjct: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EELVEKIIQTPGLWESENQNKG 184

Query: 185 IKIGPQQ 191
           +K+  ++
Sbjct: 185 VKLSHRE 191


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  172 bits (436), Expect = 2e-43
 Identities = 81/163 (49%), Positives = 120/163 (73%), Gaps = 1/163 (0%)

Query: 6   LFKYIIIGDTGVGKSCLLLQFTDKRFQP-VHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
           L K I++GD+GVGK+ LL+QF   +F P     T+G+ F  ++V +DG ++KLQIWDTAG
Sbjct: 22  LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81

Query: 65  QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
           QE FRS+T +YYR A   LL+YDIT + +F+++ +WL +  +++  ++VIML+GNK+D+ 
Sbjct: 82  QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141

Query: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
           S R ++ E+GE  ARE+G+ F+ETSAKT  NVE AF+  AKE+
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184


>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score =  168 bits (425), Expect = 4e-42
 Identities = 81/171 (47%), Positives = 115/171 (67%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y ++FK ++IG++GVGK+ LL +FT   F      TIGVEF  R V +    +K QIWDT
Sbjct: 9   YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AG E +R+IT +YYRGA GALLV+D+T+ +T+  +  WL++   H+ + +V+ML+GNKSD
Sbjct: 69  AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 173
           L   R+V  EE   FA  +GL+F+ETSA  + NVE AF    KEI+ K+ +
Sbjct: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK 179


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  168 bits (425), Expect = 4e-42
 Identities = 85/192 (44%), Positives = 128/192 (66%), Gaps = 2/192 (1%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           Y +LFK ++IG+ GVGK+CL+ +FT   F P    TIGV+F  + V I+G+++KLQIWDT
Sbjct: 6   YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 65

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE FRSIT+SYYR A   +L YDIT  E+F  L  WL +  Q++S+ ++ +L+GNK D
Sbjct: 66  AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 125

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEA 182
           L  RR+V ++  E F+    + ++ETSAK + NVE+ F++ A  +  + +Q    V+N +
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL-VNNVS 184

Query: 183 NGIKIGPQQSIS 194
           + +  G  +SIS
Sbjct: 185 SPLP-GEGKSIS 195


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  167 bits (424), Expect = 5e-42
 Identities = 85/199 (42%), Positives = 129/199 (64%), Gaps = 3/199 (1%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           + YLFK I+IGD+ VGK+C++  F    +      TIGV+F  R ++IDGK++K+Q+WDT
Sbjct: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE FR+IT+SYYR A  A++ YD+TRR TF  +  W+ +  ++ ++N+VIMLIGNK D
Sbjct: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133

Query: 123 LESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
           L  +R V  E+    A ++GL+  +ETSAK + N+EE F+  AKE+  +    L+   + 
Sbjct: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYG-ESA 192

Query: 182 ANGIKIGPQQSISTSVGPS 200
            NG+ +     +  + GPS
Sbjct: 193 LNGLPL-DSSPVLMAQGPS 210


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  167 bits (424), Expect = 5e-42
 Identities = 78/169 (46%), Positives = 122/169 (72%), Gaps = 1/169 (0%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMVNIDGKQIKLQIWD 61
           Y   FK +++GD+GVGK+CLL++F D  F     + T+G++F  +++++DG ++KLQ+WD
Sbjct: 60  YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119

Query: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
           TAGQE FRS+T +YYR A   LL+YD+T + +F+++ +WL +  +++  ++ +ML+GNK 
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179

Query: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
           D    R VKRE+GE  A+E+GL FMETSAKT  NV+ AF   AKE+ ++
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 228


>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  158 bits (399), Expect = 4e-39
 Identities = 77/190 (40%), Positives = 122/190 (64%)

Query: 7   FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 66
           FK +++G++ VGKS L+L+F   +F    + TIG  F  + V +D   +K +IWDTAGQE
Sbjct: 21  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80

Query: 67  SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 126
            + S+   YYRGA  A++VYDIT +ETF    +W+++ ++ +S ++VI L GNK+DL ++
Sbjct: 81  RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140

Query: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIK 186
           R V+ EE +A+A ++ L+FMETSAKTA NV + F+  AK++ +   Q L      + G+ 
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVD 200

Query: 187 IGPQQSISTS 196
           +  Q   + S
Sbjct: 201 LHEQSQQNKS 210


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  156 bits (394), Expect = 1e-38
 Identities = 78/190 (41%), Positives = 110/190 (57%)

Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
           + Y+FK +IIG++ VGK+  L ++ D  F P    T+G++F  + +  + K+IKLQIWDT
Sbjct: 19  FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
           AGQE +R+IT +YYRGA G +L+YDIT  E+FN +  W    + +S  N  ++L+GNK D
Sbjct: 79  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138

Query: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEA 182
           +E  R V  E G   A   G  F E SAK   NV++ F      I  K+ + L       
Sbjct: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAV 198

Query: 183 NGIKIGPQQS 192
            G K GPQ S
Sbjct: 199 TGAKQGPQLS 208


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score =  155 bits (393), Expect = 2e-38
 Identities = 77/190 (40%), Positives = 118/190 (62%)

Query: 7   FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 66
           FK +++G++ VGKS L+L+F   +F    + TIG  F  + V +D   +K +IWDTAGQE
Sbjct: 22  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81

Query: 67  SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 126
            + S+   YYRGA  A++VYDIT  +TF    +W+++ ++ +S N+VI L GNK+DL S+
Sbjct: 82  RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141

Query: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIK 186
           R V+ +E +A+A ++ L+FMETSAKTA NV E F+  AK++ +   Q          G+ 
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVD 201

Query: 187 IGPQQSISTS 196
           +      S S
Sbjct: 202 LQENNPASRS 211


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,024,932
Number of Sequences: 37866
Number of extensions: 258122
Number of successful extensions: 1108
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 731
Number of HSP's gapped (non-prelim): 256
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.