Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TEAD1 Sequence: fasta or formatted (411aa) NCBI GI: 11386151
Description:

TEA domain family member 1

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         30           2
 C cysteine            1.7          7           1
 D aspartate           4.9         20           2
 E glutamate           5.8         24           1
 F phenylalanine       5.1         21           2
 G glycine             6.1         25           2
 H histidine           3.2         13           2
 I isoleucine          5.8         24           2
 K lysine              6.8         28           2
 L leucine             6.6         27           2
 M methionine          2.9         12           2
 N asparagine          3.9         16           1
 P proline             6.3         26           2
 Q glutamine           5.6         23           2
 R arginine            5.4         22           2
 S serine              7.5         31           2
 T threonine           4.6         19           2
 V valine              6.1         25           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TEA domain family member 1 
TEAD4                 0.755   TEA domain family member 4 isoform 1 
TEAD3                 0.706   TEA domain family member 3 
TEAD4                 0.675   TEA domain family member 4 isoform 2 
TEAD2                 0.626   TEA domain family member 2 
TEAD4                 0.531   TEA domain family member 4 isoform 3 
KRTAP4-9              0.012   PREDICTED: keratin associated protein 4-9 
COL4A3                0.012   alpha 3 type IV collagen isoform 5 precursor 
COL4A3                0.012   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.012   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.012   alpha 3 type IV collagen isoform 1 precursor 
LOC100293375          0.012   PREDICTED: hypothetical protein 
LOC100288697          0.012   PREDICTED: hypothetical protein 
LOC100288697          0.012   PREDICTED: hypothetical protein XP_002342494 
DSCAML1               0.010   Down syndrome cell adhesion molecule like 1 
PRRT3                 0.010   proline-rich transmembrane protein 3 
ZNF207                0.010   zinc finger protein 207 isoform a 
CDKN1C                0.010   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.010   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.010   cyclin-dependent kinase inhibitor 1C isoform a 
TSC22D2               0.010   TSC22 domain family, member 2 
COL24A1               0.010   collagen, type XXIV, alpha 1 
SAMD4B                0.010   sterile alpha motif domain containing 4B 
LGALS3                0.010   galectin 3 
RBM42                 0.010   RNA binding motif protein 42 
RICH2                 0.010   Rho GTPase-activating protein RICH2 
ZBTB45                0.010   zinc finger and BTB domain containing 45 
MICAL3                0.009   microtubule associated monoxygenase, calponin and L...
PER2                  0.009   period 2 
ANXA11                0.009   annexin A11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press