Guide to the Human Genome
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Name: ZFP90 Sequence: fasta or formatted (636aa) NCBI GI: 113680890
Description:

zinc finger protein 90

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         24           2
 C cysteine            4.7         30           1
 D aspartate           3.6         23           1
 E glutamate           8.8         56           2
 F phenylalanine       4.2         27           1
 G glycine             6.0         38           1
 H histidine           7.1         45           2
 I isoleucine          3.8         24           2
 K lysine              7.9         50           3
 L leucine             5.7         36           2
 M methionine          0.5          3           1
 N asparagine          4.1         26           2
 P proline             4.7         30           2
 Q glutamine           6.1         39           2
 R arginine            5.8         37           2
 S serine              9.4         60           3
 T threonine           6.9         44           1
 V valine              3.0         19           1
 W tryptophan          0.9          6           1
 Y tyrosine            3.0         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 90 
ZNF135                0.472   zinc finger protein 135 
ZNF184                0.452   zinc finger protein 184 
ZNF569                0.425   zinc finger protein 569 
ZNF568                0.422   zinc finger protein 568 
ZNF470                0.419   zinc finger protein 470 
ZNF624                0.418   zinc finger protein 624 
ZNF420                0.415   zinc finger protein 420 
ZNF471                0.415   zinc finger protein 471 
ZNF546                0.407   zinc finger protein 546 
LOC100287429          0.404   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.404   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.404   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.404   zinc finger protein 84 
ZNF84                 0.404   zinc finger protein 84 
ZNF780B               0.401   zinc finger protein 780B 
ZNF780A               0.396   zinc finger protein 780A isoform b 
ZNF780A               0.396   zinc finger protein 780A isoform b 
ZNF780A               0.393   zinc finger protein 780A isoform a 
ZNF12                 0.389   zinc finger protein 12 isoform b 
ZNF33B                0.387   zinc finger protein 33B 
ZNF665                0.387   zinc finger protein 665 
ZNF595                0.386   zinc finger protein 595 
ZNF85                 0.385   zinc finger protein 85 
ZNF93                 0.384   zinc finger protein 93 
ZNF41                 0.383   zinc finger protein 41 
ZNF41                 0.383   zinc finger protein 41 
ZNF99                 0.383   zinc finger protein 99 
ZNF33A                0.382   zinc finger protein 33A isoform a 
ZNF540                0.381   zinc finger protein 540 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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