Guide to the Human Genome
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Name: ZNF41 Sequence: fasta or formatted (779aa) NCBI GI: 23510457
Description:

zinc finger protein 41

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [779aa] zinc finger protein 41
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         34           2
 C cysteine            5.4         42           1
 D aspartate           3.1         24           1
 E glutamate           7.7         60           2
 F phenylalanine       4.0         31           2
 G glycine             6.9         54           2
 H histidine           8.1         63           2
 I isoleucine          5.4         42           2
 K lysine             10.9         85           2
 L leucine             5.1         40           2
 M methionine          1.0          8           1
 N asparagine          4.0         31           2
 P proline             4.0         31           2
 Q glutamine           5.9         46           3
 R arginine            3.9         30           2
 S serine              7.1         55           2
 T threonine           6.5         51           2
 V valine              2.8         22           1
 W tryptophan          0.9          7           1
 Y tyrosine            3.0         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 41 
ZNF41                 1.000   zinc finger protein 41 
ZNF484                0.560   zinc finger protein 484 isoform a 
ZNF484                0.534   zinc finger protein 484 isoform b 
ZNF585B               0.492   zinc finger protein 585B 
ZNF81                 0.470   zinc finger protein 81 
ZNF585A               0.460   zinc finger protein 585A 
ZNF585A               0.460   zinc finger protein 585A 
LOC100287429          0.437   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.437   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.437   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.437   zinc finger protein 84 
ZNF84                 0.437   zinc finger protein 84 
ZNF175                0.435   zinc finger protein 175 
ZNF268                0.429   zinc finger protein 268 
ZNF569                0.424   zinc finger protein 569 
ZNF184                0.419   zinc finger protein 184 
ZNF160                0.413   zinc finger protein 160 
ZNF160                0.413   zinc finger protein 160 
ZNF160                0.413   zinc finger protein 160 
ZNF624                0.407   zinc finger protein 624 
ZNF33B                0.406   zinc finger protein 33B 
ZNF615                0.401   zinc finger protein 615 
ZNF420                0.398   zinc finger protein 420 
ZNF347                0.398   zinc finger protein 347 
ZNF33A                0.397   zinc finger protein 33A isoform b 
ZNF658                0.397   zinc finger protein 658 
ZNF616                0.394   zinc finger protein 616 
ZNF546                0.394   zinc finger protein 546 
ZNF43                 0.393   zinc finger protein 43 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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