Guide to the Human Genome
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Name: ZNF780B Sequence: fasta or formatted (833aa) NCBI GI: 54291708
Description:

zinc finger protein 780B

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         26           1
 C cysteine            6.0         50           1
 D aspartate           1.3         11           1
 E glutamate           9.1         76           2
 F phenylalanine       5.9         49           2
 G glycine             6.6         55           2
 H histidine           7.3         61           2
 I isoleucine          5.4         45           2
 K lysine             11.0         92           2
 L leucine             6.8         57           2
 M methionine          0.8          7           1
 N asparagine          4.8         40           1
 P proline             4.1         34           1
 Q glutamine           6.1         51           1
 R arginine            4.9         41           2
 S serine              6.1         51           2
 T threonine           4.2         35           1
 V valine              3.0         25           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.9         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 780B 
ZNF780A               0.638   zinc finger protein 780A isoform b 
ZNF780A               0.638   zinc finger protein 780A isoform b 
ZNF780A               0.635   zinc finger protein 780A isoform a 
ZNF546                0.493   zinc finger protein 546 
ZNF208                0.471   zinc finger protein 208 
ZNF91                 0.459   zinc finger protein 91 
ZNF420                0.453   zinc finger protein 420 
ZNF99                 0.448   zinc finger protein 99 
ZNF43                 0.441   zinc finger protein 43 
ZNF268                0.431   zinc finger protein 268 
ZNF585B               0.430   zinc finger protein 585B 
LOC100292052          0.428   PREDICTED: similar to hCG1773661 
LOC100287226          0.428   PREDICTED: similar to hCG1773661 
LOC100287226          0.428   PREDICTED: hypothetical protein XP_002343677 
ZNF624                0.428   zinc finger protein 624 
ZNF160                0.423   zinc finger protein 160 
ZNF160                0.423   zinc finger protein 160 
ZNF160                0.423   zinc finger protein 160 
ZNF721                0.420   zinc finger protein 721 
ZNF184                0.416   zinc finger protein 184 
ZNF107                0.414   zinc finger protein 107 
ZNF107                0.414   zinc finger protein 107 
ZNF493                0.413   zinc finger protein 493 isoform 3 
ZNF347                0.411   zinc finger protein 347 
ZNF845                0.408   zinc finger protein 845 
ZNF726                0.408   PREDICTED: zinc finger protein 726 
ZNF726                0.408   PREDICTED: zinc finger protein 726 
ZNF726                0.408   PREDICTED: zinc finger protein 726 
ZNF540                0.406   zinc finger protein 540 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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