Guide to the Human Genome
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Name: LOC731312 Sequence: fasta or formatted (150aa) NCBI GI: 113430753
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {150aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         21           2
 C cysteine            8.0         12           2
 D aspartate           3.3          5           1
 E glutamate           1.3          2           1
 F phenylalanine       2.0          3           1
 G glycine             7.3         11           2
 H histidine           0.7          1           1
 I isoleucine          1.3          2           1
 K lysine              1.3          2           1
 L leucine             4.0          6           1
 M methionine          1.3          2           1
 N asparagine          2.0          3           1
 P proline            14.0         21           3
 Q glutamine           4.7          7           1
 R arginine            8.7         13           1
 S serine             13.3         20           1
 T threonine           7.3         11           1
 V valine              2.7          4           1
 W tryptophan          2.0          3           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100287641          1.000   PREDICTED: hypothetical protein XP_002343929 
LOC731312             0.990   PREDICTED: hypothetical protein 
SP5                   0.050   Sp5 transcription factor 
HOXB4                 0.043   homeobox B4 
ANKRD43               0.040   ankyrin repeat domain 43 
SAMD1                 0.040   sterile alpha motif domain containing 1 
LOC100292349          0.040   PREDICTED: hypothetical protein 
LOC100288261          0.040   PREDICTED: hypothetical protein 
LOC100288261          0.040   PREDICTED: hypothetical protein XP_002343181 
MUC7                  0.037   mucin 7, secreted precursor 
LOC100130360          0.037   PREDICTED: hypothetical protein 
LOC100288686          0.037   PREDICTED: hypothetical protein XP_002342615 
MUC7                  0.037   mucin 7, secreted precursor 
MUC7                  0.037   mucin 7, secreted precursor 
KRTAP10-6             0.037   keratin associated protein 10-6 
SFPQ                  0.037   splicing factor proline/glutamine rich (polypyrimidin...
C17orf39              0.037   hypothetical protein LOC79018 
TAF4                  0.033   TBP-associated factor 4 
NOTCH4                0.033   notch4 preproprotein 
PHYHD1                0.033   phytanoyl-CoA dioxygenase domain containing 1 isofo...
HOXA3                 0.033   homeobox A3 isoform a 
HOXA3                 0.033   homeobox A3 isoform a 
LOC100130506          0.033   PREDICTED: hypothetical protein 
LOC100288911          0.033   PREDICTED: hypothetical protein XP_002342241 
INF2                  0.033   inverted formin 2 isoform 2 
INF2                  0.033   inverted formin 2 isoform 1 
TRIOBP                0.033   TRIO and F-actin binding protein isoform 6 
C9orf69               0.033   hypothetical protein LOC90120 
PSRC1                 0.030   proline/serine-rich coiled-coil 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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