Guide to the Human Genome
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Name: LOC731312 Sequence: fasta or formatted (150aa) NCBI GI: 169217677
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {150aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         21           2
 C cysteine            8.0         12           2
 D aspartate           4.0          6           1
 E glutamate           1.3          2           1
 F phenylalanine       2.0          3           1
 G glycine             6.7         10           2
 H histidine           0.7          1           1
 I isoleucine          1.3          2           1
 K lysine              1.3          2           1
 L leucine             4.0          6           1
 M methionine          1.3          2           1
 N asparagine          2.0          3           1
 P proline            14.0         21           3
 Q glutamine           4.7          7           1
 R arginine            8.7         13           1
 S serine             13.3         20           1
 T threonine           7.3         11           1
 V valine              2.7          4           1
 W tryptophan          2.0          3           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC731312             0.990   PREDICTED: hypothetical protein 
LOC100287641          0.990   PREDICTED: hypothetical protein XP_002343929 
SP5                   0.053   Sp5 transcription factor 
EVX2                  0.043   even-skipped homeobox 2 
SAMD1                 0.043   sterile alpha motif domain containing 1 
ANKRD43               0.040   ankyrin repeat domain 43 
LOC100288686          0.040   PREDICTED: hypothetical protein XP_002342615 
INF2                  0.037   inverted formin 2 isoform 2 
INF2                  0.037   inverted formin 2 isoform 1 
SFPQ                  0.037   splicing factor proline/glutamine rich (polypyrimidin...
MUC7                  0.037   mucin 7, secreted precursor 
LOC100292349          0.037   PREDICTED: hypothetical protein 
LOC100288261          0.037   PREDICTED: hypothetical protein 
LOC100288261          0.037   PREDICTED: hypothetical protein XP_002343181 
MUC7                  0.037   mucin 7, secreted precursor 
MUC7                  0.037   mucin 7, secreted precursor 
KRTAP10-6             0.037   keratin associated protein 10-6 
PHYHD1                0.037   phytanoyl-CoA dioxygenase domain containing 1 isofo...
C17orf39              0.037   hypothetical protein LOC79018 
LOC100130360          0.033   PREDICTED: hypothetical protein 
HOXB4                 0.033   homeobox B4 
DIAPH1                0.033   diaphanous 1 isoform 2 
DIAPH1                0.033   diaphanous 1 isoform 1 
HOXA3                 0.033   homeobox A3 isoform a 
HOXA3                 0.033   homeobox A3 isoform a 
PSRC1                 0.033   proline/serine-rich coiled-coil 1 isoform a 
PSRC1                 0.033   proline/serine-rich coiled-coil 1 isoform a 
MUC2                  0.033   mucin 2 precursor 
LOC100130506          0.033   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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