Guide to the Human Genome
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Name: WTAP Sequence: fasta or formatted (151aa) NCBI GI: 23199974
Description:

Wilms' tumour 1-associating protein isoform 2

Referenced in:

Capping and Splicing

Other entries for this name:
alt prot [396aa] Wilms' tumour 1-associating protein isoform 1
alt mRNA [151aa] Wilms' tumour 1-associating protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0          9           1
 C cysteine            0.7          1           1
 D aspartate           4.6          7           1
 E glutamate          11.9         18           2
 F phenylalanine       2.6          4           2
 G glycine             2.0          3           1
 H histidine           0.0          0           0
 I isoleucine          2.6          4           1
 K lysine              9.3         14           2
 L leucine            11.3         17           1
 M methionine          4.0          6           1
 N asparagine          4.0          6           1
 P proline             3.3          5           1
 Q glutamine          11.3         17           4
 R arginine            6.0          9           2
 S serine              4.6          7           1
 T threonine           6.6         10           2
 V valine              5.3          8           1
 W tryptophan          1.3          2           1
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Wilms' tumour 1-associating protein isoform 2 
WTAP                  1.000   Wilms' tumour 1-associating protein isoform 2 
WTAP                  0.993   Wilms' tumour 1-associating protein isoform 1 
GOLGA4                0.048   golgi autoantigen, golgin subfamily a, 4 
LZTS1                 0.044   leucine zipper, putative tumor suppressor 1 
KIF3B                 0.040   kinesin family member 3B 
DEF6                  0.040   differentially expressed in FDCP 6 homolog 
FAM107B               0.040   hypothetical protein LOC83641 
EPS15                 0.040   epidermal growth factor receptor pathway substrate 15...
RASAL2                0.037   RAS protein activator like 2 isoform 2 
RASAL2                0.037   RAS protein activator like 2 isoform 1 
EPS15                 0.037   epidermal growth factor receptor pathway substrate ...
FHAD1                 0.037   forkhead-associated (FHA) phosphopeptide binding do...
TNIP2                 0.037   A20-binding inhibitor of NF-kappaB activation 2 iso...
EZR                   0.037   ezrin 
EZR                   0.037   ezrin 
LOC100289289          0.033   PREDICTED: hypothetical protein XP_002343409 
CENPF                 0.033   centromere protein F 
MYH9                  0.033   myosin, heavy polypeptide 9, non-muscle 
CUX1                  0.033   cut-like homeobox 1 isoform a 
CUX1                  0.033   cut-like homeobox 1 isoform c 
CUX1                  0.033   cut-like homeobox 1 isoform b 
GRIPAP1               0.033   GRIP1 associated protein 1 isoform 2 
EPB41L2               0.029   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.029   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.029   erythrocyte membrane protein band 4.1-like 2 isoform ...
ZNF853                0.029   zinc finger protein 853 
HOMER1                0.029   homer 1 
CCDC158               0.029   coiled-coil domain containing 158 
NUMA1                 0.029   nuclear mitotic apparatus protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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