Guide to the Human Genome
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Search of human proteins with 21314720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21314720 Smad nuclear interacting protein [Homo sapiens]
         (396 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21314720 Smad nuclear interacting protein [Homo sapiens]           811   0.0  
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ...    68   2e-11
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [...    68   2e-11
gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8...    67   4e-11
gi|155722990 solute carrier family 4 (anion exchanger), member 1...    65   1e-10
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          60   3e-09
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...    60   4e-09
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s...    60   4e-09
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     58   1e-08
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    58   2e-08
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ...    57   3e-08
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi...    57   3e-08
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]        54   2e-07
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]     54   3e-07
gi|153251865 hypothetical protein LOC84226 [Homo sapiens]              54   3e-07
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        54   3e-07
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap...    53   4e-07
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap...    53   4e-07
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]            53   5e-07
gi|50083281 KIAA1853 protein [Homo sapiens]                            53   5e-07
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                52   9e-07
gi|60097902 filaggrin [Homo sapiens]                                   52   1e-06
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            52   1e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             52   1e-06
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]            51   2e-06
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  50   3e-06
gi|40068059 CBF1 interacting corepressor [Homo sapiens]                50   5e-06
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]        49   6e-06
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora...    49   8e-06
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              49   8e-06

>gi|21314720 Smad nuclear interacting protein [Homo sapiens]
          Length = 396

 Score =  811 bits (2094), Expect = 0.0
 Identities = 396/396 (100%), Positives = 396/396 (100%)

Query: 1   MKAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEP 60
           MKAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEP
Sbjct: 1   MKAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEP 60

Query: 61  ARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120
           ARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE
Sbjct: 61  ARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120

Query: 121 DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
           DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE
Sbjct: 121 DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180

Query: 181 FYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFR 240
           FYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFR
Sbjct: 181 FYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFR 240

Query: 241 GVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCS 300
           GVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCS
Sbjct: 241 GVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCS 300

Query: 301 KQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKF 360
           KQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKF
Sbjct: 301 KQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKF 360

Query: 361 GFSSREYVLLHESSDTSEIDRKDDEDEEEEEEVSDS 396
           GFSSREYVLLHESSDTSEIDRKDDEDEEEEEEVSDS
Sbjct: 361 GFSSREYVLLHESSDTSEIDRKDDEDEEEEEEVSDS 396


>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
           [Homo sapiens]
          Length = 624

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 10/195 (5%)

Query: 31  QERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR-RS 89
           Q  +S  + P + +  +  GG     T   +RS  + +  R   RS  K ++++  R RS
Sbjct: 286 QSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRR--KRSQSKHRSRSHNRSRS 343

Query: 90  KSPRSKRNRSPHHSTVKVKQEREDHPR-RGREDRQHREPSEQEHRRARNSDRDRHRGHSH 148
           +    +R++SPH    K ++ R+   R   R+ R+      +E  R +  DR++ R    
Sbjct: 344 RQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREK 403

Query: 149 QRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPR 208
           +R    ER   G+ + RD++ +  + +++E++    R +EH +  D      E ++   +
Sbjct: 404 EREKEKER---GKNKDRDKEREKDREKDKEKDREREREKEHEKDRD---KEKEKEQDKEK 457

Query: 209 PGGNNKEKEVPAKEK 223
               ++ KE+  K K
Sbjct: 458 EREKDRSKEIDEKRK 472



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 36/210 (17%)

Query: 42  AHRRPDHSGGSPSPPTSEPARSGHRG---NRARGV------SRSPPKKKNKASGRRSKSP 92
           +H R      S S    + ++S HR    NR+R        S+SP KK++K+  RR    
Sbjct: 310 SHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRS 369

Query: 93  RSKRNRSPHHSTVKVKQ-----------------EREDHPRRGR---------EDRQHRE 126
           RS        +  K+K+                 ERE    RG+         +DR+  +
Sbjct: 370 RSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK 429

Query: 127 PSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARR 186
             ++E  R +  ++DR +    ++    ER      +  ++  ++ +++   R  YNA R
Sbjct: 430 EKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS-YNASR 488

Query: 187 REHRQRNDVGGGGSESQELVPRPGGNNKEK 216
           R      +     S S    PR     K K
Sbjct: 489 RSRSSSRERRRRRSRSSSRSPRTSKTIKRK 518



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 18/121 (14%)

Query: 60  PARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGR 119
           P RS +   R+R  SR   ++++++S   S+SPR+ +       T+K K  R   P R R
Sbjct: 480 PPRSYNASRRSRSSSRERRRRRSRSS---SRSPRTSK-------TIKRKSSRSPSP-RSR 528

Query: 120 EDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEER 179
             +  +   E++H   R   R+R R  S  R++SN+R G    +  ++++ +L+ +E  +
Sbjct: 529 NKKDKKREKERDHISER---RERERSTS-MRKSSNDRDGK---EKLEKNSTSLKEKEHNK 581

Query: 180 E 180
           E
Sbjct: 582 E 582



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 52/232 (22%), Positives = 84/232 (36%), Gaps = 26/232 (11%)

Query: 2   KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
           K  KS   R SR R    D        +K++    E      R  +           E  
Sbjct: 357 KRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERERE----------KERE 406

Query: 62  RSGHRG-NRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120
           +   RG N+ R   R   ++K+K   R  +  +            +  +E+E    R +E
Sbjct: 407 KEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKE 466

Query: 121 -------DRQHREP--SEQEHRRARNSDRDRH----RGHSHQRRTSN--ERPGSGQGQGR 165
                  D++ R P  S    RR+R+S R+R     R  S   RTS   +R  S     R
Sbjct: 467 IDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPR 526

Query: 166 DRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKE 217
            R+ ++ + ++E       R RE            + +E + +   + KEKE
Sbjct: 527 SRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 578



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 44  RRPDHSGGSP--SPPTSEPARSG---HRGNRARGVSRSPPKKKN-KASGRRSKSPRS--- 94
           R+ D    +P  S   S  +RS     R  R+R  SRSP   K  K    RS SPRS   
Sbjct: 471 RKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK 530

Query: 95  ---KRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRR 151
              KR +   H + + ++ER    R+   DR  +E  E+     +  + ++    S  + 
Sbjct: 531 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKE 590

Query: 152 TSNERPGSGQGQGRDRDTQNLQAQEE 177
             +++      + + +   N Q  EE
Sbjct: 591 V-DDKDAPRTEENKIQHNGNCQLNEE 615


>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
           [Homo sapiens]
          Length = 508

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 10/195 (5%)

Query: 31  QERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR-RS 89
           Q  +S  + P + +  +  GG     T   +RS  + +  R   RS  K ++++  R RS
Sbjct: 170 QSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRR--KRSQSKHRSRSHNRSRS 227

Query: 90  KSPRSKRNRSPHHSTVKVKQEREDHPR-RGREDRQHREPSEQEHRRARNSDRDRHRGHSH 148
           +    +R++SPH    K ++ R+   R   R+ R+      +E  R +  DR++ R    
Sbjct: 228 RQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREK 287

Query: 149 QRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPR 208
           +R    ER   G+ + RD++ +  + +++E++    R +EH +  D      E ++   +
Sbjct: 288 EREKEKER---GKNKDRDKEREKDREKDKEKDREREREKEHEKDRD---KEKEKEQDKEK 341

Query: 209 PGGNNKEKEVPAKEK 223
               ++ KE+  K K
Sbjct: 342 EREKDRSKEIDEKRK 356



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 36/210 (17%)

Query: 42  AHRRPDHSGGSPSPPTSEPARSGHRG---NRARGV------SRSPPKKKNKASGRRSKSP 92
           +H R      S S    + ++S HR    NR+R        S+SP KK++K+  RR    
Sbjct: 194 SHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRS 253

Query: 93  RSKRNRSPHHSTVKVKQ-----------------EREDHPRRGR---------EDRQHRE 126
           RS        +  K+K+                 ERE    RG+         +DR+  +
Sbjct: 254 RSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK 313

Query: 127 PSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARR 186
             ++E  R +  ++DR +    ++    ER      +  ++  ++ +++   R  YNA R
Sbjct: 314 EKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS-YNASR 372

Query: 187 REHRQRNDVGGGGSESQELVPRPGGNNKEK 216
           R      +     S S    PR     K K
Sbjct: 373 RSRSSSRERRRRRSRSSSRSPRTSKTIKRK 402



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 18/121 (14%)

Query: 60  PARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGR 119
           P RS +   R+R  SR   ++++++S   S+SPR+ +       T+K K  R   P R R
Sbjct: 364 PPRSYNASRRSRSSSRERRRRRSRSS---SRSPRTSK-------TIKRKSSRSPSP-RSR 412

Query: 120 EDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEER 179
             +  +   E++H   R   R+R R  S  R++SN+R G    +  ++++ +L+ +E  +
Sbjct: 413 NKKDKKREKERDHISER---RERERSTS-MRKSSNDRDGK---EKLEKNSTSLKEKEHNK 465

Query: 180 E 180
           E
Sbjct: 466 E 466



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 52/232 (22%), Positives = 84/232 (36%), Gaps = 26/232 (11%)

Query: 2   KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
           K  KS   R SR R    D        +K++    E      R  +           E  
Sbjct: 241 KRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERERE----------KERE 290

Query: 62  RSGHRG-NRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120
           +   RG N+ R   R   ++K+K   R  +  +            +  +E+E    R +E
Sbjct: 291 KEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKE 350

Query: 121 -------DRQHREP--SEQEHRRARNSDRDRH----RGHSHQRRTSN--ERPGSGQGQGR 165
                  D++ R P  S    RR+R+S R+R     R  S   RTS   +R  S     R
Sbjct: 351 IDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPR 410

Query: 166 DRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKE 217
            R+ ++ + ++E       R RE            + +E + +   + KEKE
Sbjct: 411 SRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 462



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 44  RRPDHSGGSP--SPPTSEPARSG---HRGNRARGVSRSPPKKKN-KASGRRSKSPRS--- 94
           R+ D    +P  S   S  +RS     R  R+R  SRSP   K  K    RS SPRS   
Sbjct: 355 RKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK 414

Query: 95  ---KRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRR 151
              KR +   H + + ++ER    R+   DR  +E  E+     +  + ++    S  + 
Sbjct: 415 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKE 474

Query: 152 TSNERPGSGQGQGRDRDTQNLQAQEE 177
             +++      + + +   N Q  EE
Sbjct: 475 V-DDKDAPRTEENKIQHNGNCQLNEE 499


>gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8
           isoform alpha [Homo sapiens]
          Length = 351

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 249 PPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQY 308
           P  A  P     L   K D+++  + I  +  YL GR+  + D  IDH SCS+ HA   Y
Sbjct: 17  PTWAGKPPPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVY 76

Query: 309 RLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYV 368
                           + ++IDL S +GTFL + R+EP +  ++     + FG S+R Y 
Sbjct: 77  HK-----------HLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYT 125

Query: 369 LLHESSDTSEIDRKDDEDEEEEEEV 393
           L  +        + D++   E++E+
Sbjct: 126 LREKPQTLPSAVKGDEKMGGEDDEL 150


>gi|155722990 solute carrier family 4 (anion exchanger), member 1,
           adaptor protein [Homo sapiens]
          Length = 796

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 27/173 (15%)

Query: 246 YSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAV 305
           Y EPP        + L   K   +L    +   S  L GR     D+ ++HPS S+ HAV
Sbjct: 154 YQEPPWGGPATAPYSLETLKGGTILGTRSLKGTSYCLFGRLSG-CDVCLEHPSVSRYHAV 212

Query: 306 FQYRLVEYTRADGTVGRRVKP-YIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSS 364
            Q+R    +  DG         Y+ DLGS +GTFLN  RI P+ Y  +    V++FG S+
Sbjct: 213 LQHRA---SGPDGECDSNGPGFYLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGST 269

Query: 365 REYVLLHESSDTSE-------------------IDRK---DDEDEEEEEEVSD 395
           R ++L     D                      +++K   +D DEEEE + S+
Sbjct: 270 RLFILQGPEEDREAESELTVTQLKELRKQQQILLEKKMLGEDSDEEEEMDTSE 322


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 32/222 (14%)

Query: 47  DHSGGSPSPPTSEPARSGHRGN-RARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTV 105
           DH G S     S  ++SG     R    SRSP K ++++   RS+SP   R+RS   S  
Sbjct: 376 DHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRS---RSRSPYKARDRSRSRSPN 432

Query: 106 KVKQ-EREDHPRRGREDRQHREPSE-QEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQ 163
           K +   R   P + R+  + R P++ ++H R+R+ ++ R R  S  R  S ER  S  G 
Sbjct: 433 KARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDR--SRSRSPSKERDHSQLGS 490

Query: 164 -GRDRDTQNLQAQEEEREFYNAR----RREHRQRNDVGGGGSESQELVPRPGGNNKEKEV 218
             ++RD +  ++  +ER+   +R     R+HR+           Q   P     NKE++ 
Sbjct: 491 PSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSP-----NKERDR 545

Query: 219 PAKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWR 260
                PS E                 + S  P     ++RWR
Sbjct: 546 SQSRSPSEEREH--------------RQSRSPSKERDRRRWR 573



 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 25/221 (11%)

Query: 69  RARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQERE-DHPRRGREDRQHREP 127
           R R  SRSP K ++ +   RS+SP   R+RS   S  K +   +   P + R+ R+ R P
Sbjct: 447 RDRSRSRSPNKARDHS---RSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSP 503

Query: 128 S-EQEHRRARNSDRDRHRGHSHQRRTSNERP-GSGQGQGRDRDTQNLQAQEEEREFYNAR 185
           S E++ R++R+S ++  R H   R  S ER     +   ++RD    ++  EERE   +R
Sbjct: 504 SKERQCRQSRSSSKE--RDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSR 561

Query: 186 ----------------RREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELS 229
                            RE RQ          S+   P            +KEK      
Sbjct: 562 SPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSR 621

Query: 230 GALLEDTNTFRGVVIKYSEPPEARIPKK-RWRLYPFKNDEV 269
               E  ++      K S+P ++ +P+   W+  P +   +
Sbjct: 622 TPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSL 662



 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 12/152 (7%)

Query: 45  RPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSK---SPRSKRNRSPH 101
           RP     S SP  S         +R R  S S  +  ++A  R  K   S   + ++S  
Sbjct: 277 RPQSHSQSRSPRRSRSGSQKRTHSRVR--SHSWKRNHSRARSRTRKGILSQMGRHSQSRS 334

Query: 102 HSTVKVKQEREDHPRRGREDRQHREPS-EQEHRRARNSDRDR-HRGHSHQR----RTSNE 155
           HS  K  Q +   PRRGR     R PS E+ H  +R+S ++R HRG S  R    R+ + 
Sbjct: 335 HSKGK-SQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSG 393

Query: 156 RPGSGQGQGRDRDTQNLQAQEEEREFYNARRR 187
            P   +   R R     + +   R  Y AR R
Sbjct: 394 SPNKQRDHSRSRSPNKARDRSRSRSPYKARDR 425



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 54/188 (28%), Positives = 73/188 (38%), Gaps = 26/188 (13%)

Query: 41  PAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRS-KRNRS 99
           P   R      SPS              R    SRSP K++     R S   R  +R+RS
Sbjct: 467 PNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRS 526

Query: 100 PHHSTVKVKQEREDH-PRRGREDRQHREPSEQ-EHRRAR--NSDRDRHRGHS-------H 148
           P     K +Q R+   P + R+  Q R PSE+ EHR++R  + +RDR R  S        
Sbjct: 527 PS----KERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERR 582

Query: 149 QRRTSNER--------PGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGS 200
           Q R+S+E         P    G  R R +   +A    R    ++   H Q         
Sbjct: 583 QSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRT--PSKEGNHSQSRTSSKESD 640

Query: 201 ESQELVPR 208
            SQ  VPR
Sbjct: 641 PSQSTVPR 648



 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 74  SRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPS--EQE 131
           SRS  K K++    +S++PR  R RS + S    K+    H R   ++R HR  S   +E
Sbjct: 332 SRSHSKGKSQ---NQSRTPR--RGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKE 386

Query: 132 HRRARNSDRDRHRGHSHQR-------RTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNA 184
             R+++   ++ R HS  R       R+ +  P   + + R R     +     R  Y A
Sbjct: 387 SGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKA 446

Query: 185 RRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFEL 228
           R R   +  +     S S+   P    +      P+KE+   +L
Sbjct: 447 RDRSRSRSPNKARDHSRSRS--PNKARDRSRSRSPSKERDHSQL 488



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 31  QERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSK 90
           +ER   +    +  R      SPS              R R  SRSP +++     R+S+
Sbjct: 505 KERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREH---RQSR 561

Query: 91  SPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQH---REPSEQE-HRRARNSDRDRHRGH 146
           SP  +R+R    S  K ++ R+   R   E+R H   R P++Q  + R R S ++  + H
Sbjct: 562 SPSKERDRRRWRSPSKERERRQS--RSSSEERDHSRSRSPNKQSGYSRPRASSKE--KAH 617

Query: 147 SHQRRTSNE 155
           S  R  S E
Sbjct: 618 SRSRTPSKE 626



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 11/180 (6%)

Query: 48  HSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKV 107
           HS G     +  P R      R+   SR+P K+++ +  R S   R  R  S      + 
Sbjct: 335 HSKGKSQNQSRTPRRG-----RSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRK--ES 387

Query: 108 KQEREDHPRRGREDRQHREPSEQEHRRARNSD---RDRHRGHSHQRRTSNERPGSG-QGQ 163
            + +   P + R+  + R P++   R    S    RDR R  S  +     R  S  + +
Sbjct: 388 GRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKAR 447

Query: 164 GRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
            R R     +A++  R     + R+  +          SQ   P    +++    P+KE+
Sbjct: 448 DRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKER 507



 Score = 37.4 bits (85), Expect = 0.024
 Identities = 53/232 (22%), Positives = 82/232 (35%), Gaps = 45/232 (19%)

Query: 30  KQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNK----AS 85
           +  + S  +AP     P      P PP S  +      NR+  V   P   +N     +S
Sbjct: 6   RSSKPSMSLAPSGSSMPT---ADPKPPASLKSTKSATPNRSL-VPTKPATSRNSVMSPSS 61

Query: 86  GRRSKSPRSKR---NRSPHHSTVKVK-------------------------QEREDHPRR 117
            + +KS  +KR   NR    S V+ K                         Q R  H R 
Sbjct: 62  SKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRG 121

Query: 118 GREDRQHREPSEQEHRRARNSDRDRHRG-----HSHQRRTSNERPGS-GQGQGRDRDTQN 171
               R+    S++   RA    R R  G      S  R  ++++ GS G+  GR R +  
Sbjct: 122 RTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNR 181

Query: 172 LQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
            ++  + R   N  ++ +R     G G S    + P          +P+KEK
Sbjct: 182 ERSDSQPR---NLSKKSYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEK 230



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 43/173 (24%)

Query: 52  SPSPPTSEPARS-GHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQE 110
           +PSP +S   +S G     +R  S SP +  ++    +S +  S R+R   HS     Q 
Sbjct: 233 NPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRV---KSYNQASTRSRPQSHS-----QS 284

Query: 111 REDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQ 170
           R   PRR R   Q R  S             R R HS +R  S                 
Sbjct: 285 RS--PRRSRSGSQKRTHS-------------RVRSHSWKRNHS----------------- 312

Query: 171 NLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
             +A+   R+   ++   H Q      G S++Q   PR G ++     P+KE+
Sbjct: 313 --RARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKER 363



 Score = 30.4 bits (67), Expect = 2.9
 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 13/101 (12%)

Query: 30  KQERLSPEVAPPAHRR-PDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRR 88
           +Q R S E    +  R P+   G   P  S   ++  R       SR+P K+     G  
Sbjct: 582 RQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSR-------SRTPSKE-----GNH 629

Query: 89  SKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSE 129
           S+S  S +   P  STV    + +  P R     Q+R PS+
Sbjct: 630 SQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSK 670


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 7/179 (3%)

Query: 61  ARSGHRGNRARGVSRSPPKKKNK-ASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGR 119
           A  G  G+R+R  SRSP  K++K    RRS+S    R R    S  K +    D  R  R
Sbjct: 13  ASRGRSGSRSR--SRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRR 70

Query: 120 EDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPG--SGQGQGRDRDTQNLQAQEE 177
              + R+ S +E RR+R+ DR R R  S  RR+ +  PG  S + + R R  +     E 
Sbjct: 71  SRSRERDRS-RERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGES 129

Query: 178 EREFYNAR-RREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLED 235
            +E    +  +E  +  D G       E   R      EK    + K + E  G L ++
Sbjct: 130 SKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKE 188



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 28/184 (15%)

Query: 83  KASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDR 142
           K S  R +S    R+RSP           +   +RG +DR+ R   +++ RR R+  RD+
Sbjct: 10  KRSASRGRSGSRSRSRSP----------SDKRSKRG-DDRRSRS-RDRDRRRERSRSRDK 57

Query: 143 HRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSES 202
            R  S  R+    R    + + RDR  +  +++  +R    +R R  R R+   G  S+ 
Sbjct: 58  RRSRSRDRK----RLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKK 113

Query: 203 QELVPRP------GGNNKEKEVPAKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPK 256
            E   R       G ++KEK+    +K   +   A   D N     + K  E  E     
Sbjct: 114 TENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVE----- 168

Query: 257 KRWR 260
            +WR
Sbjct: 169 -KWR 171



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 9/155 (5%)

Query: 67  GNRARGVSRSPPKKKNKASGRRSKSPRSKRN-RSPHHSTVKVKQEREDHPRRGREDRQHR 125
           G  +R   +    +    S  RS+SP  KR+ R     +    ++R     R R+ R+ R
Sbjct: 2   GRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR 61

Query: 126 EPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNAR 185
               +  RR+R+ +RDR    S +RR S  R    + + R R  ++  +    +      
Sbjct: 62  SRDRKRLRRSRSRERDR----SRERRRSRSR-DRRRSRSRSRGRRSRSSSPGNKSKKTEN 116

Query: 186 RREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPA 220
           R   +++ D   GG  S+E          EKE  A
Sbjct: 117 RSRSKEKTD---GGESSKEKKKDKDDKEDEKEKDA 148



 Score = 34.3 bits (77), Expect = 0.20
 Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 40/175 (22%)

Query: 69  RARGVSRSPPKKKNKASGRRSKS--PRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHRE 126
           R R  SR   + ++++ GRRS+S  P +K  ++ + S  K K +  +  +  ++D+  +E
Sbjct: 82  RRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKE 141

Query: 127 PSEQ------------EHRRARNSDRDRHRGHSHQRRTSN-------------------- 154
             ++            E  R R    ++ R    ++   N                    
Sbjct: 142 DEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLE 201

Query: 155 ------ERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQ 203
                 + P   + +G + + + L   +   E      ++   R+  GGGG+E +
Sbjct: 202 DDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKK 256



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 20/208 (9%)

Query: 52  SPSPPTSEPARSGHRGNRARGV------SRSPPKKKNKASGR------RSKSPRSKRNRS 99
           S SP      R   R +R+R        SRS  K+++++  R      RS+     R R 
Sbjct: 24  SRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERR 83

Query: 100 PHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGS 159
              S  + +       RR R      +  + E+R       D       +++  +++   
Sbjct: 84  RSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDE 143

Query: 160 GQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGG-------N 212
            +    + D   L+ +  +R+    + RE +++  +   G   +E+     G       +
Sbjct: 144 KEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDD 203

Query: 213 NKEKEVPAK-EKPSFELSGALLEDTNTF 239
           + +++ PA+ EK   E+ G  L+  + +
Sbjct: 204 DDDEDDPAEAEKEGNEMEGEELDPLDAY 231



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 44  RRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSK----RNRS 99
           RR + S       +    R   R +R+R   RS  ++++++  RR    RS+    R+ S
Sbjct: 47  RRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSS 106

Query: 100 PHHSTVKVK-----QEREDHPRRGREDRQHREPSEQEHRR-ARNSDRDRHRGHSHQRRTS 153
           P + + K +     +E+ D     +E ++ ++  E E  + A N D+++      +R+  
Sbjct: 107 PGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRK-- 164

Query: 154 NERPGSGQGQGRDRDTQNLQAQEEERE 180
            ER    + + R +  +N+   ++E E
Sbjct: 165 -ERVEKWREEQRKKAMENIGELKKEIE 190


>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
           sapiens]
          Length = 434

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 22/171 (12%)

Query: 30  KQERLSPE-VAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR- 87
           +++ L+PE  +P   ++ + S  S SP  S+     H  +R+R  SR   K+K+   GR 
Sbjct: 7   ERDGLAPEKTSPDRDKKKEQSEVSVSPRASK-----HHYSRSRSRSRER-KRKSDNEGRK 60

Query: 88  ---RSKSPRSKRNRSPHHSTVKVKQE----REDHPRRGREDRQHREPSEQEHRRARNSDR 140
              RS+S   +R+ S   S+ K K E    +E    +GRE     E  E  H+R    +R
Sbjct: 61  HRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKR---KER 117

Query: 141 DRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQ 191
              RG SH R  S ER    + + R R+ +  +++  ER+   +R RE ++
Sbjct: 118 KSSRGRSHSRSRSRER----RHRSRSRERKKSRSRSRERKKSRSRSRERKK 164



 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 30  KQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRS 89
           K+E+    V+P A +   H   S S       +S + G + R  SRS   +++++  + S
Sbjct: 23  KKEQSEVSVSPRASKH--HYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSS 80

Query: 90  KSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQ 149
           K  +S+ +    HS+ K  +ER +    G EDR  R+  E++  R R+  R R R   H+
Sbjct: 81  KKHKSEEHNDKEHSSDK-GRERLNSSENG-EDRHKRK--ERKSSRGRSHSRSRSRERRHR 136

Query: 150 RRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQR 192
            R S ER  S   + R R+ +  +++  ER+   +R RE ++R
Sbjct: 137 SR-SRERKKS---RSRSRERKKSRSRSRERKKSRSRSRERKRR 175



 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 18/167 (10%)

Query: 7   ERERGSR---RRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSG--GSPSPPTSEPA 61
           ER+R S    R+HR             +++ S +     H   +HS   G     +SE  
Sbjct: 49  ERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENG 108

Query: 62  RSGH-RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120
              H R  R     RS  + +++    RS+S   K++RS         +ER+    R RE
Sbjct: 109 EDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSR-------SRERKKSRSRSRE 161

Query: 121 DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDR 167
            ++ R  S +  RR R+  R R R H H+ R+ +      + + RDR
Sbjct: 162 RKKSRSRSRERKRRIRSRSRSRSR-HRHRTRSRSRT----RSRSRDR 203



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 16/165 (9%)

Query: 31  QERL-SPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRS 89
           +ERL S E     H+R +      S      +RS  R  R R  SRS  +KK+++  R  
Sbjct: 99  RERLNSSENGEDRHKRKERK----SSRGRSHSRSRSRERRHR--SRSRERKKSRSRSRER 152

Query: 90  KSPRSK-RNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSH 148
           K  RS+ R R    S  + ++ R     R R   +HR  S     R R+  RDR +    
Sbjct: 153 KKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRS---RTRSRSRDRKKRIEK 209

Query: 149 QRRTSNE-----RPGSGQGQGRDRDTQNLQAQEEEREFYNARRRE 188
            RR S        P   +G+    D Q   A+  ER      +RE
Sbjct: 210 PRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQRE 254


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 7/166 (4%)

Query: 43  HRRPDHSGGSPSPPTSEPARSGHR-GNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPH 101
           H R   S    S  +   +RS  R G+R+R  SRS  + ++++   +S+SP  +++RS  
Sbjct: 200 HSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRS 259

Query: 102 HSTVKVKQEREDHPRRGREDRQHREPSEQEHRR--ARNSDRDRHRGHSHQRRTSNERPGS 159
           HS  K + + +D   +  E  Q+ +   +   R  +R+  + + R  S +RR   E+ GS
Sbjct: 260 HSAGKSRSKSKD---QAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGS 316

Query: 160 -GQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQE 204
             +G+ +++  +  +++   +    +R R   +  D   G   S+E
Sbjct: 317 VSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSRE 362



 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 16/182 (8%)

Query: 38  VAPPAHRRPD-HSGGSPSPPTSEPAR--SGHRGNRARGVSRSPPKKKNKASGRRSKSPRS 94
           V  P  R P  H   S S   S+  R     RG+ +RG S+   +K  + S  RS+S   
Sbjct: 283 VGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQ---EKSLRQSRSRSRSKGG 339

Query: 95  KRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSN 154
            R+RS   S  K K       R+GR  ++ RE S    R    S+R R RG     +  +
Sbjct: 340 SRSRSRSRSKSKDK-------RKGR--KRSREESRSRSRSRSKSERSRKRGSKRDSKAGS 390

Query: 155 ERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNK 214
            +    +   R +     ++  +ERE   +   +   R +    G+ +QE   R   N+K
Sbjct: 391 SKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGT-NQETRSRSRSNSK 449

Query: 215 EK 216
            K
Sbjct: 450 SK 451



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 56  PTSEPARSGHRG-NRARGVSRSPPKKKNKASGRRSKSPRSK-RNRSPHHSTVKVKQERED 113
           P S   RS  R  + +R  SRS   +K+++    SKS  SK R+RS   S  + K     
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRS 236

Query: 114 HPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQ 173
             R   +  + R PS+ E  R+R+    + R  S  +     +     G+ + R     +
Sbjct: 237 QSRSRSKKEKSRSPSK-EKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHK 295

Query: 174 AQEEEREFYNARRREHRQRNDVGGGGSESQEL 205
           ++ + R     RR E  +R  V  G S+ + L
Sbjct: 296 SKSKSRSRSQERRVEEEKRGSVSRGRSQEKSL 327



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 30  KQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHR---GNRARGVSRSPPKKKNKASG 86
           K    S E      +R   S G     +   +RS  R   G+R+R  SRS  K K K   
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGR- 357

Query: 87  RRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGH 146
           +RS+     R+RS   S    K+  +   + G   ++ +E +++   R+ +    + R H
Sbjct: 358 KRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREH 417

Query: 147 SHQRRTSNERPGSGQGQGRDRDTQN 171
           +    +  E  G  +  G +++T++
Sbjct: 418 AKSESSQREGRGESENAGTNQETRS 442



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 40/192 (20%), Positives = 70/192 (36%), Gaps = 4/192 (2%)

Query: 12  SRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRAR 71
           SR R ++  V       V + R   +    +  R    GGS S   S       R  R R
Sbjct: 300 SRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKR 359

Query: 72  GVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQE 131
               S  + ++++   RS+   SKR+     S    K+++ED  R            E+E
Sbjct: 360 SREESRSRSRSRSKSERSRKRGSKRDSKAGSSK---KKKKEDTDRSQSRSPSRSVSKERE 416

Query: 132 HRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQ 191
           H ++ +S R+  RG S    T+ E     +   + +     +++   +     R R   +
Sbjct: 417 HAKSESSQRE-GRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSR 475

Query: 192 RNDVGGGGSESQ 203
                   S S+
Sbjct: 476 SRSASRSPSRSR 487



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)

Query: 56  PTSEPARS-GHRGNRARGVSRSPPKKK--NKASGRRSKSPRSKRNRSPHHSTVKVKQERE 112
           P+ E +RS  H   ++R  S+   ++K  N  +  + KS    R++S   S  + ++ R 
Sbjct: 250 PSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRV 309

Query: 113 DHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNL 172
           +  +RG   R   +       R+R+  +   R  S  R  S ++      +GR R  +  
Sbjct: 310 EEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDK-----RKGRKRSREES 364

Query: 173 QAQEEEREFYNARRREHRQRNDVGGGGSESQE 204
           +++   R   + R R+   + D   G S+ ++
Sbjct: 365 RSRSRSRS-KSERSRKRGSKRDSKAGSSKKKK 395



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 112 EDHPRRGREDRQHREPSEQEHR-RARNSDRDRHRG----HSHQRRTSNERPGSGQGQGRD 166
           ED P   R     R  S    R R+R+S + R R      SH +  S  R GS       
Sbjct: 174 EDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 233

Query: 167 RDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPS 225
             +Q+    ++E+    ++ +   + +  G   S+S++       NN     P    PS
Sbjct: 234 SRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 292


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 17/193 (8%)

Query: 69  RARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPS 128
           R R   R   K++ +   R+++  R +  ++      + ++ERE    R R+  + RE  
Sbjct: 329 RQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREER 388

Query: 129 EQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRRE 188
           E+        DRDR R    +R+T  +R G        R+T+  + +E++RE    R R 
Sbjct: 389 ER--------DRDRDRQKERERQTEKDRDG-------QRETEKQREREKDRESERGRERG 433

Query: 189 HRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTN-TFRGVVIKYS 247
             +    G      ++   + G   K   +     P    SG +  D N   RG+  K S
Sbjct: 434 REREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKSS 493

Query: 248 -EPPEARIPKKRW 259
            E P+A   +  W
Sbjct: 494 PEDPKAASTRFPW 506



 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 1/126 (0%)

Query: 69  RARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPS 128
           R R   R   +K+ +    R +  R++R+R       + ++   +  R  + +R+     
Sbjct: 266 RDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERER 325

Query: 129 EQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQ-GQGRDRDTQNLQAQEEEREFYNARRR 187
           E+E +R    DR++ R    +R+T  +R  + Q G+   R  +  + +E ER+  +AR R
Sbjct: 326 ERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSARER 385

Query: 188 EHRQRN 193
           E R+R+
Sbjct: 386 EERERD 391



 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 15/196 (7%)

Query: 69  RARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPS 128
           R  G +       ++   R+ +  R +  R     T + ++ R +  R  + DR      
Sbjct: 40  RGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQR 99

Query: 129 EQEHRRARNSD--RDRHRGHSHQRRTSNERPGSGQGQ-GRDRDTQNLQAQEEEREFYNAR 185
           ++E  R R +D  RDR R     R+   ER    +G+ GRDR T   + +E +R+    R
Sbjct: 100 DREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKER 159

Query: 186 RRE---HRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFRGV 242
            R+    RQR        E +    R     +E++   + K          ED ++ RG 
Sbjct: 160 ERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENK---------TEDRHSERGR 210

Query: 243 VIKYSEPPEARIPKKR 258
             +     E    +KR
Sbjct: 211 ERERERETETETERKR 226



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 50/233 (21%), Positives = 87/233 (37%), Gaps = 16/233 (6%)

Query: 2   KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
           +  + E ERG R R  DG          ++     +      R+ D      +    +  
Sbjct: 129 RETEREGERG-RDRQTDGQ---------RERERQRDAEKERERQTDRERQRQTERNRQKE 178

Query: 62  RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSK-RNRSPHHSTVKVKQEREDHPRRGRE 120
           R   +  + R       +K+NK   R S+  R + R R     T + +Q   +  R+ + 
Sbjct: 179 REREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKT 238

Query: 121 DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
           +R+  + +E+E    R ++RD+ R     R    +R    + +  DR  Q    ++ E E
Sbjct: 239 EREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETE 298

Query: 181 FYNARRRE-----HRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFEL 228
               R+RE      R R        E +    R    ++EKE   K K   E+
Sbjct: 299 RKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEM 351



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 88  RSKSPRSKRNRSPHHSTVKVKQ-EREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGH 146
           R +  +++R R+    T + K+ ERE    R R+ RQ     + + +R R ++RDR    
Sbjct: 240 REREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETER 299

Query: 147 SHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRRE-HRQRNDVGGGGSESQEL 205
             +R+   ER    + + R+R+ +  + +E +RE    R +E  R+R        E    
Sbjct: 300 KRERQRERERERE-RNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQ 358

Query: 206 VPRPGGNNKEKE 217
             R G    E+E
Sbjct: 359 TGREGRRQAERE 370



 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 18/212 (8%)

Query: 7   ERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHR 66
           ER R  R+  R+ D         K+ER   +     HR+ D           E  R   R
Sbjct: 63  ERRREKRQTERETDR--------KRERRREK---DRHRKRDRHRERQRDREKERERQTDR 111

Query: 67  G-NRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
             +R R   R+  K++ + + R  +  R ++         +   E+E   +  RE ++  
Sbjct: 112 ERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQT 171

Query: 126 EPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNAR 185
           E + Q+ R  R  +R   R    QR   N+       +GR+R+ +     E ER+    R
Sbjct: 172 ERNRQKERE-REKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDR 230

Query: 186 RREHRQRNDVGGGGSESQELVPRPGGNNKEKE 217
            R+ +++ +      E ++   R   + +E E
Sbjct: 231 ERDRQRKTE-----REREKQAERERASERETE 257



 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 11/154 (7%)

Query: 59  EPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG 118
           E  R   R  R +   R   +K+ + + R  ++ R +  +       +  ++RE    R 
Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERE 324

Query: 119 REDRQHREPS-----EQEHRRARNS--DRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQN 171
           RE  + RE       E+E +R R +  DR+R+R    + R   ER    + + R+RD Q+
Sbjct: 325 RERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERE---RERERERDRQS 381

Query: 172 LQAQEE-EREFYNARRREHRQRNDVGGGGSESQE 204
            + +EE ER+    R++E  ++ +    G    E
Sbjct: 382 AREREERERDRDRDRQKERERQTEKDRDGQRETE 415



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 3/108 (2%)

Query: 62  RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRED 121
           ++G  G R     R   +++++ S R  +     R+R       +  ++  D  R   + 
Sbjct: 358 QTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQ 417

Query: 122 RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDT 169
           R+  +  E E  R R  +R++ +G    R    +R     G+ R R T
Sbjct: 418 REREKDRESERGRERGREREKQKGRERDRERQTDRQA---GRQRKRST 462



 Score = 35.8 bits (81), Expect = 0.069
 Identities = 40/162 (24%), Positives = 55/162 (33%), Gaps = 9/162 (5%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARS- 63
           +S RER  R R RD D         K+     E      R  +          SE  R  
Sbjct: 380 QSAREREERERDRDRDRQ-------KERERQTEKDRDGQRETEKQREREKDRESERGRER 432

Query: 64  GHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG-REDR 122
           G    + +G  R   ++ ++ +GR+ K      N  P  +   V Q   + P RG R   
Sbjct: 433 GREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKS 492

Query: 123 QHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQG 164
              +P     R          RG    RR    R G  +GQG
Sbjct: 493 SPEDPKAASTRFPWGRPAKASRGRVAGRRRWEPRLGEKRGQG 534


>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing B [Homo sapiens]
          Length = 546

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 29/286 (10%)

Query: 34  LSPEVAPPAHRRPDH--SGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKS 91
           LSP  +P   R   H   G   S    E  R   R    R       +++   S  R   
Sbjct: 267 LSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLE 326

Query: 92  PRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRR 151
            R  R+R  H S  + +  + D  RR R DR+  + +E+  RR R+ D++R      +R 
Sbjct: 327 RRRSRSRERHRSRSRSRDRKGD--RRDR-DREREKENERGRRRDRDYDKERGNEREKERE 383

Query: 152 TSNERPGSGQGQG--------------RDRDTQNLQAQEEEREFYNARRREHRQRNDVGG 197
            S ER    + +G              R RD +    +E++     +R R+HR R+    
Sbjct: 384 RSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443

Query: 198 GGSESQELVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKK 257
            G  S+         +K +      K S   SG+     +  +    ++S   E    + 
Sbjct: 444 AGKRSRSRSKEKSSKHKNESKEKSNKRS--RSGSQGRTDSVEKSKKREHSPSKEKSRKRS 501

Query: 258 RWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQH 303
           R +    K D        H  S     +H R     I+  S  KQH
Sbjct: 502 RSKERSHKRD--------HSDSKDQSDKHDRRRSQSIEQESQEKQH 539



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 53/230 (23%), Positives = 86/230 (37%), Gaps = 15/230 (6%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           +S R   SR  HR+G         +++E+    +   A  R      S S       R  
Sbjct: 271 RSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRS 330

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVK-----QEREDHPRRGR 119
               R R  SRS  +K ++    R +   ++R R       K +     +ERE    R +
Sbjct: 331 RSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSK 390

Query: 120 EDRQHREPSEQEH------RRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQ 173
           E R   E  E++H      RR R+  RD  +   H R  S ER    + + R+   ++  
Sbjct: 391 EQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRS 450

Query: 174 AQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
             +E+   +    +E   +    G    SQ        + K +  P+KEK
Sbjct: 451 RSKEKSSKHKNESKEKSNKRSRSG----SQGRTDSVEKSKKREHSPSKEK 496



 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 46/165 (27%), Positives = 64/165 (38%), Gaps = 16/165 (9%)

Query: 32  ERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHR-GNRARGVSRSPPKKKNKASGRRSK 90
           E +   V     R P  S      P    +RS HR G+ +    R   ++K +    R  
Sbjct: 249 EEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREA 308

Query: 91  SPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQR 150
             R K  R           +R    RR R   +HR  S    R+    DRDR      +R
Sbjct: 309 KEREKERRRSR------SIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDR------ER 356

Query: 151 RTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDV 195
              NER   G+ + RD D +    +E+ERE    R +E R R +V
Sbjct: 357 EKENER---GRRRDRDYDKERGNEREKERERSRERSKEQRSRGEV 398



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 42/203 (20%)

Query: 5   KSERERGSRRRHRDGDVVLP---------AGVVVKQERLSPEVAPPAH-------RRPDH 48
           + E ERG RRR RD D             +    K++R   EV    H       R  D 
Sbjct: 357 EKENERG-RRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDD 415

Query: 49  SGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVK 108
              S        +RS  R +R+R  SR+        +G+RS+S RSK   S H +  K K
Sbjct: 416 KRDSKKEKKHSRSRSRERKHRSRSRSRN--------AGKRSRS-RSKEKSSKHKNESKEK 466

Query: 109 -QEREDHPRRGRED-------RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSG 160
             +R     +GR D       R+H    E+  +R+R+ +R   R HS  +  S++     
Sbjct: 467 SNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHD--- 523

Query: 161 QGQGRDRDTQNLQAQEEEREFYN 183
                 R +Q+++ + +E++  N
Sbjct: 524 -----RRRSQSIEQESQEKQHKN 541



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 16/134 (11%)

Query: 2   KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
           K  K  R R   R+HR       AG   K+ R   +     H+            +++ +
Sbjct: 421 KEKKHSRSRSRERKHRSRSRSRNAG---KRSRSRSKEKSSKHKNESKE------KSNKRS 471

Query: 62  RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSK-RNRSPHHSTVKVKQEREDHPR---- 116
           RSG +G R   V +S  ++ + +  +  K  RSK R+    HS  K + ++ D  R    
Sbjct: 472 RSGSQG-RTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSI 530

Query: 117 -RGREDRQHREPSE 129
            +  +++QH+   E
Sbjct: 531 EQESQEKQHKNKDE 544



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 21/164 (12%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           K  +E    RRHRD      +    K  R          R    + G  S   S+   S 
Sbjct: 401 KKHKEDKDDRRHRDDK--RDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSK 458

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQH 124
           H+        +S  + ++ + GR     +SK+              RE  P +  + R+ 
Sbjct: 459 HKNESKE---KSNKRSRSGSQGRTDSVEKSKK--------------REHSPSK-EKSRKR 500

Query: 125 REPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRD 168
               E+ H+R  +  +D+   H  +R  S E+  S + Q +++D
Sbjct: 501 SRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQE-SQEKQHKNKD 543


>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo
           sapiens]
          Length = 1554

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 11/94 (11%)

Query: 276 HRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGN 335
           HR    L+   R   ++ +   S  KQHAV  Y              R + ++ DLGS N
Sbjct: 16  HRLPRELIFVGREECELMLQSRSVDKQHAVINYDQ-----------DRDEHWVKDLGSLN 64

Query: 336 GTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVL 369
           GTF+N+ RI  Q+Y  LK  DV++FG+ S  YVL
Sbjct: 65  GTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVL 98


>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
          Length = 1564

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 45/185 (24%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 40  PPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRS 99
           P   R P+      +  +S   R G R  R        P    +  GR  +  R +R   
Sbjct: 603 PERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREE 662

Query: 100 PHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGS 159
                V    +R D   R R DR+     E+E  R R  DR+R +    +R  + ER   
Sbjct: 663 RRVDRV---DDRRDERARER-DRERERDRERERERERERDREREKERELERERARERERE 718

Query: 160 GQGQ-------GRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGN 212
            + +        RD D +  + +E +RE    R RE R+R        E +    R    
Sbjct: 719 REKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERAR 778

Query: 213 NKEKE 217
            ++KE
Sbjct: 779 ERDKE 783



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 7/149 (4%)

Query: 53  PSPPTSEPARSGH----RGNRARGVSRSPPKKKNKASGR---RSKSPRSKRNRSPHHSTV 105
           PS P     R+           R V R   ++  +A  R   R +    +R R       
Sbjct: 641 PSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDRE 700

Query: 106 KVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGR 165
           + K+   +  R    +R+  +  ++E  R R+ DR+R R     R    ER    + + R
Sbjct: 701 REKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERER 760

Query: 166 DRDTQNLQAQEEEREFYNARRREHRQRND 194
           +R+ +  + +E ERE    R +E  ++ D
Sbjct: 761 ERERERERERERERERARERDKERERQRD 789



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 5/165 (3%)

Query: 31  QERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSK 90
           Q  L+P +   A   P HS  SP    S P    HR +  R   R   ++ +++  RR +
Sbjct: 360 QRTLTPPLRRSASPYPSHSLSSPQRKQSPPR---HR-SPMREKGRHDHERTSQSHDRRHE 415

Query: 91  SPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHR-GHSHQ 149
                R +       + ++E E      R+ R  REP +   RR     RDR     S  
Sbjct: 416 RREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRD 475

Query: 150 RRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRND 194
            R S E     +     RD ++ ++  +  ++ +   R+  ++ D
Sbjct: 476 MRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRKED 520



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 11/147 (7%)

Query: 68  NRARGVSRSPPKKKNKASGRRSKSPRSK-RNRSPHHSTVKVKQEREDHPRRGREDRQHRE 126
           +R R   R   +++ +   R  +  R + R+R   H   + ++   D  +    +R+ RE
Sbjct: 698 DREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERE 757

Query: 127 PSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE-----EEREF 181
             E+E  R R  +R+R R  + +R    ER    + + + RD +  + +E       R+ 
Sbjct: 758 -RERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDG 816

Query: 182 YNARRREHRQRNDVGGGGSESQELVPR 208
           ++ R+ + R RN+    GS S    P+
Sbjct: 817 HDERKSKKRYRNE----GSPSPRQSPK 839



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 44   RRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHS 103
            +R  HSG      T     +G R +R   + R  P +   +  + S+S  S+R+ SP   
Sbjct: 1225 KRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRS-SP--- 1280

Query: 104  TVKVKQEREDHPRRGREDRQHR--EPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQ 161
                + +R+ H R G  D + R  E    EH R R  +R   R     R    + P    
Sbjct: 1281 ----ESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWP---- 1332

Query: 162  GQGRDRDTQNLQAQEEEREFYNARRREHRQR 192
               R+RD   L+ +E ERE  + RR   R+R
Sbjct: 1333 ---RNRDRDRLRERERERE-RDKRRDLDRER 1359



 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQER 111
           +PSP          R + +   S S    + K S  R +SP  ++ R  H  T +    R
Sbjct: 354 TPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRR 413

Query: 112 ED--HPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRD-RD 168
            +     RG+ DR+     E+E+ + ++S RD HR     R   + R        R+ RD
Sbjct: 414 HERREDTRGKRDREKDSREEREYEQDQSSSRD-HRDDREPRDGRDRRDARDTRDRRELRD 472

Query: 169 TQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKE 217
           +++++   E R+ Y+   +E R   D      ++ +   R G +   KE
Sbjct: 473 SRDMRDSREMRD-YSRDTKESRDPRD-SRSTRDAHDYRDREGRDTHRKE 519



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 49/194 (25%), Positives = 71/194 (36%), Gaps = 28/194 (14%)

Query: 39  APPAHRRP-------DHSGGSPSPPTSEPARSGHRGNRARGV-SRSPPKKKNKASGRRS- 89
           +PP HR P       DH   S S       R   RG R R   SR   + +   S  R  
Sbjct: 387 SPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDH 446

Query: 90  ---KSPRSKRNRSPHHSTVKVKQEREDHPRR--------GREDRQHREPSEQEHRRARNS 138
              + PR  R+R     T   ++ R+    R         R+ ++ R+P +    R  + 
Sbjct: 447 RDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHD 506

Query: 139 DRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQ--RNDVG 196
            RDR    +H  R  +  P   +  GR+    +L+ +    E  N  R E R   RND  
Sbjct: 507 YRDREGRDTH--RKEDTYPEESRSYGRN----HLREESSRTEIRNESRNESRSEIRNDRM 560

Query: 197 GGGSESQELVPRPG 210
           G        +P  G
Sbjct: 561 GRSRGRVPELPEKG 574



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 17/189 (8%)

Query: 43  HRRPDHSGGSPSPPTSEPARSGHRGNR-ARGVSRSPPKKKNKASGRRSKSPRSKRNRSPH 101
           H R + S       +   +RS  R +R  R   R P   +  + G R     S  + S +
Sbjct: 533 HLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNY 592

Query: 102 HSTVKVKQ---EREDHPRRGREDRQHREPSEQEH---RRARNSDRD-------RHRGHSH 148
           H + + +    ER+ +P R   D+      E+ H    R  N +RD       RH+G + 
Sbjct: 593 HDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRND 652

Query: 149 QRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPR 208
           +      R      +  DR  +  + ++ ERE    R RE  +  D      E +  + R
Sbjct: 653 ELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERD---REREKERELER 709

Query: 209 PGGNNKEKE 217
                +E+E
Sbjct: 710 ERARERERE 718



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 6/166 (3%)

Query: 66  RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
           R  RAR   R   + + +    R +     R R       + +    +  R    DR+  
Sbjct: 672 RDERARERDRERERDRER---ERERERERDREREKERELERERAREREREREKERDRERD 728

Query: 126 EPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNAR 185
              + +  R R  +RDR +    +R          + + R+R+ +  +A+E ++E    R
Sbjct: 729 RDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDKE--RER 786

Query: 186 RREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGA 231
           +R+   ++       E +E + R   N ++     K K  +   G+
Sbjct: 787 QRDWEDKDKGRDDRREKREEI-REDRNPRDGHDERKSKKRYRNEGS 831



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 14/185 (7%)

Query: 51   GSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQE 110
            GSPSP  S   R  H  +     S     +K++   +  + P+  R+ SP H T   +  
Sbjct: 830  GSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVR-PQESRSLSPSHLTEDRQGR 888

Query: 111  REDHPRRGREDRQHREPSEQEHRRARNS-DRDRHRGHSHQRRTSNERPGSGQGQGRDRDT 169
             ++  R+       R   EQE +   +S D+ R +    +      +   G  Q  DR+T
Sbjct: 889  WKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRET 948

Query: 170  QNLQAQEEEREFYNARRR--EHRQRNDVG-------GGGSESQELVPRPGGNNKEKEVPA 220
             + +A +E ++    +++  + ++ +DVG           + Q   P+ G   K+K +  
Sbjct: 949  SD-RAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKG--QKKKSIEK 1005

Query: 221  KEKPS 225
            K K S
Sbjct: 1006 KRKKS 1010



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 58/264 (21%), Positives = 94/264 (35%), Gaps = 30/264 (11%)

Query: 7   ERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRP---DHSGGSPSPPTSEPARS 63
           ERER  R R R+ +         ++ER          +R       G        E  R 
Sbjct: 750 EREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIRE 809

Query: 64  GHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR------R 117
                      +S  + +N+ S    +SP+ +R  SP         ++ +  R      R
Sbjct: 810 DRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVR 869

Query: 118 GREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEE 177
            +E R        E R+ R  + DR      +R+ S+ R    + Q       ++  Q E
Sbjct: 870 PQESRSLSPSHLTEDRQGRWKEEDR----KPERKESSRR---YEEQELKEKVSSVDKQRE 922

Query: 178 EREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEK----EVPAKEKPSFELSGALL 233
           + E   + R   R ++ +G   SE +E   R    NK+K    + P K+K          
Sbjct: 923 QTEILESSRM--RAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKE-------- 972

Query: 234 EDTNTFRGVVIKYSEPPEARIPKK 257
           +D    RG +   SE  +   PKK
Sbjct: 973 DDVGIERGNIETTSEDGQVFSPKK 996



 Score = 37.4 bits (85), Expect = 0.024
 Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 27/183 (14%)

Query: 16   HRDGDV------VLPAGVVVKQERLSPEVAPPAHRRPDH-SGGSPSPPTSEPARSGHRGN 68
            HR GD       VL +G   +++  S E+      R D    G PS  TS   R   R +
Sbjct: 1215 HRSGDDQSGRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSD-RQDSRSH 1273

Query: 69   RARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQERE------------DHPR 116
             +R  S    ++ +  SG      R +      H   + ++ R+            D PR
Sbjct: 1274 SSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPR 1333

Query: 117  RGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
                DR      E+E  + R+ DR+R R  S       +R        RDR  ++ Q + 
Sbjct: 1334 NRDRDRLRERERERERDKRRDLDRERERLISDSVERDRDR-------DRDRTFESSQIES 1386

Query: 177  EER 179
             +R
Sbjct: 1387 VKR 1389



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 19/84 (22%), Positives = 35/84 (41%)

Query: 97   NRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNER 156
            N   H    + + E+ + P    ED QHR+P +Q+   +  S+R      S + R+ +  
Sbjct: 1153 NEDSHRKCHRTRVEKVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSND 1212

Query: 157  PGSGQGQGRDRDTQNLQAQEEERE 180
                 G  +    + L +   +RE
Sbjct: 1213 SAHRSGDDQSGRKRVLHSGSRDRE 1236



 Score = 28.9 bits (63), Expect = 8.5
 Identities = 48/196 (24%), Positives = 70/196 (35%), Gaps = 32/196 (16%)

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKN--KASGRRSKSPRSKRNR----SP---HH 102
           SP PP  E    G +      V     +K    K  GR  +  R KR++    SP   HH
Sbjct: 265 SPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHH 324

Query: 103 STVKVK------------QEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQR 150
           S +  +            Q     PRR R      + +     R   S    H   S QR
Sbjct: 325 SPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQR 384

Query: 151 RTSNERPGSG-QGQGR---DRDTQNLQAQEEEREFYNARR------REHRQ-RNDVGGGG 199
           + S  R  S  + +GR   +R +Q+   + E RE    +R      RE R+   D     
Sbjct: 385 KQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSR 444

Query: 200 SESQELVPRPGGNNKE 215
               +  PR G + ++
Sbjct: 445 DHRDDREPRDGRDRRD 460


>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
          Length = 484

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)

Query: 60  PARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHST-VKVKQEREDHPRRG 118
           P+ S HR +R+R   RS  K +++   RRSKSPR +R+ S       +   +  D  +  
Sbjct: 261 PSSSRHRRSRSRSRRRSHSKSRSR---RRSKSPRRRRSHSRERGRRSRSTSKTRDKKKED 317

Query: 119 REDRQHREP--SEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
           +E ++ + P  S    RR+R++ R+R R  S     S ++P S + +     +     +E
Sbjct: 318 KEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKE 377

Query: 177 EEREFYNARRREHRQRN 193
           ++++    R R+ R+R+
Sbjct: 378 KKKDKDKERSRDERERS 394



 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 61/250 (24%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPAR-- 62
           K E+ R SR R R      P+    ++ R          RR  HS       +  P R  
Sbjct: 242 KEEKRRHSRSRSRSRRRRTPSSSRHRRSR-------SRSRRRSHSKSRSRRRSKSPRRRR 294

Query: 63  --SGHRGNRARGVSRSPPKKKNKASGRRSKSP-----------------RSKRNRSPHHS 103
             S  RG R+R  S++  KKK     +RSK+P                 R +R+RS   S
Sbjct: 295 SHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRS 354

Query: 104 -----TVKVKQEREDHPRRGRED----------RQHREPSEQEHRRARNSDRDRHRGHSH 148
                + K K  R   PRR +++          R  RE S  + +++++ ++DR R    
Sbjct: 355 PKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE- 413

Query: 149 QRRTSNERPGSGQGQGRDRDTQNL-QAQEEEREFYNARRREHRQRNDVGGGGSESQELVP 207
                            D+D + + +  +EE + Y++ + +  ++  +  G  +++E   
Sbjct: 414 ----------------SDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSV 457

Query: 208 RPGGNNKEKE 217
             G  +  +E
Sbjct: 458 EKGTGDSLRE 467



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 77  PPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRAR 136
           P KK+ K    RS+S RS+R R+P  S            RR R   + R  S+   RR  
Sbjct: 239 PDKKEEKRRHSRSRS-RSRRRRTPSSS----------RHRRSRSRSRRRSHSKSRSRRRS 287

Query: 137 NSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARR-----REHRQ 191
            S R R R HS + R    R  S     +  D +  +++   + +  ARR     RE R+
Sbjct: 288 KSPR-RRRSHSRE-RGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRR 345

Query: 192 RNDVGGGGSESQELVPR--------PGGNNKEKE 217
           R    G  S  +   P+        P  + KEK+
Sbjct: 346 RRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKK 379


>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
          Length = 1984

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 54/194 (27%), Positives = 78/194 (40%), Gaps = 22/194 (11%)

Query: 32   ERLSPEVAPPAHRRP-DHSGGSPSPPTSE-PARSGHRGNRARGVSRSPPKKKNKASGRRS 89
            ER     +  +HR P + S  SPS      P++  HRG   R    SP K+ +++  RRS
Sbjct: 1667 ERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERR-HHSPSKRSHRSPARRS 1725

Query: 90   -KSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEH-----RRARNSDRDRH 143
             +SP  + + SP   +     ER  H      +R H  PSE+ H     RR R+    RH
Sbjct: 1726 HRSPSERSHHSPSERSHHSPSERRHH---SPSERSHCSPSERSHCSPSERRHRSPSERRH 1782

Query: 144  RG------HSHQRRT----SNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRN 193
                    HS   R+    S  R  S   + R    +       ER  + +  R HR+ +
Sbjct: 1783 HSPSEKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRIS 1842

Query: 194  DVGGGGSESQELVP 207
            +     SE   L P
Sbjct: 1843 ERSHSPSEKSHLSP 1856



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 14/162 (8%)

Query: 43   HRRP-DHSGGSPSPPT--SEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRS 99
            H  P + S  SPS     S P RS H  +  RG+     +     S RR  SP  + +RS
Sbjct: 1598 HSSPSERSWRSPSQRNHCSPPERSCHSLSE-RGLHSPSQRSHRGPSQRRHHSPSERSHRS 1656

Query: 100  PHHSTVKVKQERE-----DHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSN 154
            P   + +   ER          RG  +R H  PSE+ H   R+  +  HRG S +R  S 
Sbjct: 1657 PSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERRH---RSPSQRSHRGPSERRHHSP 1713

Query: 155  ERPGSGQGQGRDRDTQNLQAQE--EEREFYNARRREHRQRND 194
             +        R   + + ++     ER  ++   R H   ++
Sbjct: 1714 SKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRHHSPSE 1755



 Score = 36.6 bits (83), Expect = 0.041
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 56   PTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHP 115
            P S   R+ HR  +     +   K+ N  S  R ++PR    R+ H+ + +  +   +  
Sbjct: 1518 PGSPVKRTWHRHLK----DKLTHKEHNHPSFYRERTPRGPSERTRHNPSWRNHRSPSERS 1573

Query: 116  RRGREDRQHREPSEQEH----RRARNSDRDRHRGHSHQRRTSNERPGSGQG---QGRDRD 168
            +R   +R+H  PS++ H    R+  +S  +R      QR   +    S      +G    
Sbjct: 1574 QRSSLERRHHSPSQRSHCSPSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSP 1633

Query: 169  TQNLQAQEEEREFYNARRREHRQRND 194
            +Q       +R  ++   R HR  ++
Sbjct: 1634 SQRSHRGPSQRRHHSPSERSHRSPSE 1659



 Score = 33.1 bits (74), Expect = 0.45
 Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 23/167 (13%)

Query: 13   RRRHRDGDVVLPAGVVVKQERL---------SPEVAPPAHRRPDHSGGSPSPPTSEPA-- 61
            +R  R  D + PAG  +KQE +         S +    A+         P P  S+    
Sbjct: 1406 KRDKRSADKLTPAGSTIKQEDILWGGTVQCRSAQQPRRAYSFQPRPLRLPKPTDSQSGIA 1465

Query: 62   -RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVK----------VKQE 110
             ++   G   R V +    +  K   R   S +  +N S   + V+          VK+ 
Sbjct: 1466 FQTASVGQPLRTVQKDSSSRSKKNFYRNETSSQESKNLSTPGTRVQARGRILPGSPVKRT 1525

Query: 111  REDHPRRGREDRQHREPSEQEHRRARN-SDRDRHRGHSHQRRTSNER 156
               H +     ++H  PS    R  R  S+R RH       R+ +ER
Sbjct: 1526 WHRHLKDKLTHKEHNHPSFYRERTPRGPSERTRHNPSWRNHRSPSER 1572



 Score = 33.1 bits (74), Expect = 0.45
 Identities = 36/146 (24%), Positives = 50/146 (34%), Gaps = 24/146 (16%)

Query: 5    KSERERGSRRRH----RDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEP 60
            +S      RRRH    R    +L        ER S      +HRR      SPS      
Sbjct: 1796 RSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISERSHSPS------ 1849

Query: 61   ARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSP------------HHSTVKVK 108
                H     R       ++ + +SG+   SP  + +RSP            H S+ +  
Sbjct: 1850 -EKSHLSPLERSRCSPSERRGHSSSGKTCHSPSERSHRSPSGMRQGRTSERSHRSSCERT 1908

Query: 109  QEREDHPRRGR-EDRQHREPSEQEHR 133
            +      R GR   R H  PSE+  R
Sbjct: 1909 RHSPSEMRPGRPSGRNHCSPSERSRR 1934


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 20/202 (9%)

Query: 30   KQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRR- 88
            +  R SPE+   A         S SP T       HR  R+  VS   P +K+++S RR 
Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHR--RSPSVSSPEPAEKSRSSRRRR 1746

Query: 89   -SKSPR----SKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRH 143
             + SPR    S+R RSP      +++ R     R R ++            ++++ R R 
Sbjct: 1747 SASSPRTKTTSRRGRSPSPKPRGLQRSRS----RSRREKTRTTRRRDRSGSSQSTSRRRQ 1802

Query: 144  RGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQ 203
            R  S  R T   R GSG        +++   QE  R   ++RRR  R R           
Sbjct: 1803 RSRSRSRVTRRRRGGSGY------HSRSPARQESSRT--SSRRRRGRSRTPPTSRKRSRS 1854

Query: 204  ELVPRPGGNNKEKEVPAKEKPS 225
               P P   ++ +  PA  + S
Sbjct: 1855 RTSPAPWKRSRSRASPATHRRS 1876



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 43/200 (21%), Positives = 71/200 (35%), Gaps = 11/200 (5%)

Query: 35   SPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRS 94
            SPEV   +   P  S    SP   +  R+  R       S  P     +A  RRS+S  S
Sbjct: 1582 SPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSS 1641

Query: 95   KRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQ----- 149
             + R P        +   +HP + R  R+    S +   ++R   R R    S +     
Sbjct: 1642 SKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKA 1701

Query: 150  RRTSNERPGSGQGQGRDRD------TQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQ 203
            R +   R  S   + R R       + ++ + E   +  ++RRR               +
Sbjct: 1702 RLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761

Query: 204  ELVPRPGGNNKEKEVPAKEK 223
               P+P G  + +    +EK
Sbjct: 1762 SPSPKPRGLQRSRSRSRREK 1781



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 18/192 (9%)

Query: 35  SPEVAPPAHRRPD---HSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKS 91
           S E +PP+ +      H+  SP  P   PA   HR   +   S++    + K     S +
Sbjct: 417 SSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHT 476

Query: 92  PRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRR 151
           P  +  RS   +T K  + R   P +    R H      + RR+R++ R   R  S QRR
Sbjct: 477 PSRRMGRSRSPATAKRGRSRSRTPTK----RGHSRSRSPQWRRSRSAQR-WGRSRSPQRR 531

Query: 152 TSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGG 211
             +  P    G  R R+TQ            +ARR     R+    G S S+   P   G
Sbjct: 532 GRSRSP-QRPGWSRSRNTQRRGRSR------SARRGRSHSRSPATRGRSRSR--TPARRG 582

Query: 212 NNKEKEVPAKEK 223
            ++ +  PA+ +
Sbjct: 583 RSRSR-TPARRR 593



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 59/220 (26%), Positives = 87/220 (39%), Gaps = 38/220 (17%)

Query: 35   SPEVAPPAHR---RPDHSGGS-----PSPPTSEPARSG----HRGNRARGVSRSPPKKKN 82
            SPE   PA R   R   SG S     PSP  S    S      +   AR  SRS P+ K 
Sbjct: 1621 SPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKT 1680

Query: 83   KASGRRSKSPRSKRNRSPHHSTVKVKQEREDH------PRRGREDRQHR--------EPS 128
            K+       PR + +RS    T K +  R           R R   +HR        EP+
Sbjct: 1681 KS----RTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPA 1736

Query: 129  EQEH--RRARNSDRDRHRGHSHQRRTSNERP-GSGQGQGRDRDTQNLQAQEEEREFYNAR 185
            E+    RR R++   R +  S + R+ + +P G  + + R R  +    +  +R   +  
Sbjct: 1737 EKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQS 1796

Query: 186  RREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPS 225
                RQR+      S S+    R GG+      PA+++ S
Sbjct: 1797 TSRRRQRS-----RSRSRVTRRRRGGSGYHSRSPARQESS 1831



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 16/190 (8%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            +E+ R SRRR        P      +   SP   P   +R      S S    E  R+  
Sbjct: 1736 AEKSRSSRRRRSASS---PRTKTTSRRGRSPSPKPRGLQR------SRSRSRREKTRTTR 1786

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
            R +R+ G S+S  +++ + S  RS+  R +R  S +HS    +QE      R R  R   
Sbjct: 1787 RRDRS-GSSQSTSRRRQR-SRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRT 1844

Query: 126  EPSEQEHRRARNSDRDRHRGHSH-----QRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
             P+ ++  R+R S     R  S       RR+ +  P   + + R R +   + +   R 
Sbjct: 1845 PPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRT 1904

Query: 181  FYNARRREHR 190
                RR   R
Sbjct: 1905 SVTRRRSRSR 1914



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 16/167 (9%)

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKNK--------------ASGRRSKSPRSKRN 97
           S SP T   +RS     R R  SR+P +++++              A   RS+S    R 
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623

Query: 98  RSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARN-SDRDRHRGHSHQRRTSNER 156
           RS   S V+ ++ R   P R     + R P+ +   R+R  + R R R  +  RR+   R
Sbjct: 624 RSRTRSPVR-RRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSR 682

Query: 157 PGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQ 203
             +   +GR R     + +   R      R   R     G  GS S+
Sbjct: 683 SRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSE 729



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 46  PDHSGGSPSPPTSEPARSGHRGNRARGVSRSPP-----KKKNKASGRRSKSPRSKRNRSP 100
           P         P  EP +  +   R    SRSP      KKK K  GRRS+S   +R R  
Sbjct: 153 PQRRAREAKQPAPEPPKP-YSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKK 211

Query: 101 HHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRG--------HSHQRRT 152
                K + E E       + R+HR P+ +  R++++  R R R          +H+  +
Sbjct: 212 SSKKKKHRSESES------KKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTS 265

Query: 153 SNERPGSGQGQGRDR 167
           ++    S   + R R
Sbjct: 266 ADSASSSDTSRSRSR 280



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 29/206 (14%)

Query: 42  AHRRPDHSGGSPSPPTSE--------PARSGHRGNRAR-----------GVSRSPPKKKN 82
           +H      G S SP T++        P + GH  +R+            G SRSP ++  
Sbjct: 474 SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGR 533

Query: 83  KASGRRSKSPRSK--RNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDR 140
             S +R    RS+  + R    S  + +        RGR   + R P+ +   R+R   R
Sbjct: 534 SRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS--RSRTPARRGRSRSRTPAR 591

Query: 141 DRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNAR-----RREHRQRNDV 195
            R R  +  RR S  R  + +G+ R R     +++        +R     RR  R R+  
Sbjct: 592 RRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRT 651

Query: 196 GGGGSESQELVPRPGGNNKEKEVPAK 221
                 S+   P   G ++ +  PA+
Sbjct: 652 PARRGRSRSRTPARRGRSRSR-TPAR 676



 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 17/161 (10%)

Query: 41  PAHRR-----PDHSGGSPSPPTSEPARSGHRGNRARGVSRS-PPKKKNKASGRRSKSPRS 94
           PA RR     P         P     RS  R    RG SRS  P ++ ++   RS++P  
Sbjct: 620 PARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRS---RSRTPAR 676

Query: 95  KRNRSPHHSTVKVKQEREDHPRRGRE--------DRQHREPSEQEHRRARNSDRDRHRGH 146
           +  RS   +  +  + R   PRRGR          R H    ++  R   +S+R      
Sbjct: 677 RSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRT 736

Query: 147 SHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRR 187
           S +R  SN  P   + +   R +++L +   + +   + RR
Sbjct: 737 SQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRR 777



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 26/191 (13%)

Query: 36  PEVAPPAHRRPDHSGGSPSP----PTS-EPARSGHRGNRARGVSRSPPKKKNK---ASGR 87
           PE   P     +  GGSP P    P S EP       +  R   RSPPK   K   +S  
Sbjct: 361 PEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTR--DRSPPKSPEKLPQSSSS 418

Query: 88  RSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSE---QEHRRARNSDRDRHR 144
            S  P  +  +   H++        + P+       HRE S     ++R    + RD+  
Sbjct: 419 ESSPPSPQPTKVSRHAS-----SSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSH 473

Query: 145 GHSHQRRTSNERPGSGQGQGRDRD---TQNLQAQEEEREFYNAR--RREHRQRNDVGGGG 199
            H+  RR    R  +   +GR R    T+   ++    ++  +R  +R  R R+    G 
Sbjct: 474 SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGR 533

Query: 200 SESQELVPRPG 210
           S S +   RPG
Sbjct: 534 SRSPQ---RPG 541



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 23/155 (14%)

Query: 60  PARSGHRGNRA----RGVSRSPPKKKNKA------SGR-RSKSPRSKRNRSPHHSTVKVK 108
           PAR G   +R     R  +RSP ++++++      SGR RS++P ++R RS   +  +  
Sbjct: 609 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTP-ARRGRSRSRTPARRG 667

Query: 109 QEREDHPRRGREDRQHREPSEQEHRRARNSDRDR-------HRGHSHQRRTSNERPGSG- 160
           + R   P R     + R P+ +   R+R   R R        RG SH  RT   R  SG 
Sbjct: 668 RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHS-RTPQRRGRSGS 726

Query: 161 --QGQGRDRDTQNLQAQEEEREFYNARRREHRQRN 193
             + + + R +Q         E   +R    R R+
Sbjct: 727 SSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS 761



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 14/159 (8%)

Query: 5   KSERER---GSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHR-RPDHSGGSPSPPTSEP 60
           K+ER R   G    + DG    P     + ++ +PE   P    R   S  SP+P   + 
Sbjct: 131 KNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKK 190

Query: 61  ARSGHRGNRARGVSRSPPKKKNKASGRRSK--SPRSKRNRSPHHSTVKVKQEREDHPRRG 118
            +   RG R+     S P+++ K S ++ K  S    + R     T K K++ +D  R+ 
Sbjct: 191 KKKKDRGRRSES---SSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKR 247

Query: 119 REDRQHREPSEQEHR-----RARNSDRDRHRGHSHQRRT 152
                    S + HR      A +SD  R R  S   +T
Sbjct: 248 SRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKT 286



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 53/223 (23%), Positives = 82/223 (36%), Gaps = 38/223 (17%)

Query: 49  SGGSPSPP-------------TSEP-ARSGHRGNRARGVSRSPPKKKNKASGRRSKS--- 91
           SG SP P              +S+P A+S     R+R  S  PPK+K+K   R+S S   
Sbjct: 780 SGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSS 839

Query: 92  --PRSKRNRSPHHSTVKVKQEREDH--PRRGREDRQHREPSEQEHRRARNSDRDRHRGHS 147
             P+ K    P   ++   Q  E    P+R    R   E S     ++R   R    G S
Sbjct: 840 PHPKVKSGTPPRQGSITSPQANEQSVTPQR----RSCFESSPDPELKSRTPSRHSCSGSS 895

Query: 148 HQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVP 207
             R  S+  P       R   +++   Q + +   + R+R H   +        S+    
Sbjct: 896 PPRVKSSTPP-------RQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPR 948

Query: 208 RPGGNNKEKEVPAKEKPSFELSGALLEDTNTFRGVVIKYSEPP 250
           R    +    V ++  P +  SG+   DT       +K   PP
Sbjct: 949 RSRSVSPCSNVESRLLPRYSHSGSSSPDTK------VKPETPP 985



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 54/216 (25%), Positives = 78/216 (36%), Gaps = 28/216 (12%)

Query: 5    KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
            K  R R S   HR      P   ++ + R     +P + RR      S S  +    RS 
Sbjct: 1862 KRSRSRASPATHRRSRSRTP---LISRRRSRSRTSPVSRRR------SRSRTSVTRRRSR 1912

Query: 65   HRGN---RARGVSRSPPKKKNKASGRRSKSPRSKRNRSP-------HHSTVKVKQER--- 111
             R +   R R  SR+PP  + ++  R   + R  R+R+P          T  V + R   
Sbjct: 1913 SRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRS 1972

Query: 112  EDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSH-----QRRTSNERPGSGQGQGRD 166
               P   R  R    P  +   R+R S   R R  S      +RR+ +  P + + + R 
Sbjct: 1973 RTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRS 2032

Query: 167  RDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSES 202
            R T  L  +        A RR  R R      G  S
Sbjct: 2033 R-TPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRS 2067



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 12/105 (11%)

Query: 44  RRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSK---SPRSKR---- 96
           R P   G S S  +SE         R    + SP  KK++ S RRS+   SPRSK     
Sbjct: 716 RTPQRRGRSGS--SSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRL 773

Query: 97  --NRSPHHSTVKVKQEREDHPRRGRE-DRQHREPSEQEHRRARNS 138
              RS   S+   KQ+ +  PRR R    Q +  S    RR+R+S
Sbjct: 774 SLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSS 818



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 9/119 (7%)

Query: 29   VKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRG-NRARGVSRSPPKKKNKASGR 87
            + + R     +P   RR   S    SP T   +RS      R R  SR+PP  + ++   
Sbjct: 1977 ITRRRSRSRTSPVTRRR---SRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRS--- 2030

Query: 88   RSKSPRSKRNRSPHHSTVKV-KQEREDHPRRGREDRQ-HREPSEQEHRRARNSDRDRHR 144
            RS++P   R RS   S + + ++ R   PR  R  R   R P     R A  S  DR R
Sbjct: 2031 RSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSR 2089



 Score = 35.8 bits (81), Expect = 0.069
 Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 24   PAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSP------ 77
            P     K++R S   +  +      S  S S  +S  + S    + +   S SP      
Sbjct: 2596 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPG 2655

Query: 78   PKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQERE------DHPRRGREDRQHREPSEQE 131
            P+   K +  +   P  +R+RSP      ++  R       +  R   +     + S   
Sbjct: 2656 PQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSS 2715

Query: 132  HRRARNSDRDRHRGHSHQRRTSNERP 157
             R +R   R   R  SH+RR     P
Sbjct: 2716 ERGSRRGQRGDSRSPSHKRRRETPSP 2741



 Score = 35.8 bits (81), Expect = 0.069
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 15/114 (13%)

Query: 49   SGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRS-----KRNRSPHHS 103
            S  S S  +  PA+ G      + + +    KK     RRS+SPR      + +RS  +S
Sbjct: 2640 SSSSSSSSSPSPAKPG-----PQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYS 2694

Query: 104  TVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERP 157
             V   + R   P+    D+Q    SE+  RR +  D  R   H  +R T + RP
Sbjct: 2695 PV---ERRRPSPQPSPRDQQ-SSSSERGSRRGQRGD-SRSPSHKRRRETPSPRP 2743



 Score = 34.7 bits (78), Expect = 0.15
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 12/64 (18%)

Query: 39   APPAHRRPDHSGGSPSP-PTSEPARSGHRGNR--ARGVSRSPPKKKNKASGRRSKSPRSK 95
            +P   RRP     SP P P  + + S  RG+R   RG SRSP  K+     R + SPR  
Sbjct: 2694 SPVERRRP-----SPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRR----RETPSPRPM 2744

Query: 96   RNRS 99
            R+RS
Sbjct: 2745 RHRS 2748



 Score = 30.0 bits (66), Expect = 3.8
 Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKS-----PRSKRNRSPHHSTVK 106
           S S P  + +R   R  R+R +S    K K++ S RRS S     P+ K    P  S   
Sbjct: 743 SNSSPEMKKSRISSR--RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSG 800

Query: 107 VKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHS-HQRRTSNERPGSGQGQGR 165
             Q +       R  R    P  ++  +++   R  H   S H +  S   P  G     
Sbjct: 801 SSQPKAKSRTPPRRSRSSSSPPPKQ--KSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSP 858

Query: 166 DRDTQNLQAQ 175
             + Q++  Q
Sbjct: 859 QANEQSVTPQ 868


>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 20/189 (10%)

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHST------- 104
           S S   S  + S   G+       S PK+K + S  RS + +++R+RS  +S        
Sbjct: 526 STSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESN 585

Query: 105 ---VKVKQEREDHPRR-GREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSG 160
              VK++  R  +     RE R++R PS +E RR+R+  RDR    + + R+ + R    
Sbjct: 586 RARVKIRDRRRSNRNSIERERRRNRSPS-RERRRSRSRSRDRRTNRASRSRSRDRRKIDD 644

Query: 161 QGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPA 220
           Q      ++   + + +E+E     R++ R R+       + +E   R    +K KE   
Sbjct: 645 QRGNLSGNSHKHKGEAKEQE-----RKKERSRSIDKDRKKKDKE---REREQDKRKEKQK 696

Query: 221 KEKPSFELS 229
           +E+  F+ S
Sbjct: 697 REEKDFKFS 705



 Score = 38.1 bits (87), Expect = 0.014
 Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 24/201 (11%)

Query: 6   SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSG---GSPSPPTSEPAR 62
           S   R SR R RD           +  R S   +    +  D  G   G+      E   
Sbjct: 613 SRERRRSRSRSRDR----------RTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKE 662

Query: 63  SGHRGNRARGVSRSPPKK----KNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG 118
              +  R+R + +   KK    + +   R+ K  R +++        ++K++RE      
Sbjct: 663 QERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFS 722

Query: 119 RED----RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQ--GRDRDTQNL 172
           R      +  R  S Q+ +++   D  +H G     R+S+E PGS + +   + + +++ 
Sbjct: 723 RSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSR 782

Query: 173 QAQEEEREFYNARRREHRQRN 193
             ++ +R    A R+ H+ ++
Sbjct: 783 SVEKSQRSGKKASRK-HKSKS 802


>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 20/189 (10%)

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHST------- 104
           S S   S  + S   G+       S PK+K + S  RS + +++R+RS  +S        
Sbjct: 526 STSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESN 585

Query: 105 ---VKVKQEREDHPRR-GREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSG 160
              VK++  R  +     RE R++R PS +E RR+R+  RDR    + + R+ + R    
Sbjct: 586 RARVKIRDRRRSNRNSIERERRRNRSPS-RERRRSRSRSRDRRTNRASRSRSRDRRKIDD 644

Query: 161 QGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPA 220
           Q      ++   + + +E+E     R++ R R+       + +E   R    +K KE   
Sbjct: 645 QRGNLSGNSHKHKGEAKEQE-----RKKERSRSIDKDRKKKDKE---REREQDKRKEKQK 696

Query: 221 KEKPSFELS 229
           +E+  F+ S
Sbjct: 697 REEKDFKFS 705



 Score = 38.1 bits (87), Expect = 0.014
 Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 24/201 (11%)

Query: 6   SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSG---GSPSPPTSEPAR 62
           S   R SR R RD           +  R S   +    +  D  G   G+      E   
Sbjct: 613 SRERRRSRSRSRDR----------RTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKE 662

Query: 63  SGHRGNRARGVSRSPPKK----KNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG 118
              +  R+R + +   KK    + +   R+ K  R +++        ++K++RE      
Sbjct: 663 QERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFS 722

Query: 119 RED----RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQ--GRDRDTQNL 172
           R      +  R  S Q+ +++   D  +H G     R+S+E PGS + +   + + +++ 
Sbjct: 723 RSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSR 782

Query: 173 QAQEEEREFYNARRREHRQRN 193
             ++ +R    A R+ H+ ++
Sbjct: 783 SVEKSQRSGKKASRK-HKSKS 802


>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 275

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 25/191 (13%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           K  RER  R+R R+ +     G   K++R   E      R+             E  R  
Sbjct: 38  KERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKER---------EKQRKE 88

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQH 124
            R    R   +   K++ K  GRR +               K K+ER++  R  ++ R+ 
Sbjct: 89  RREKERRKRKKEKKKRERKQRGRRER---------------KKKKERKERERENKQRRER 133

Query: 125 REPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDR-DTQNLQAQEEEREFYN 183
           +    ++ +R +   R++ RG   ++R   ++    + + R+R + +  + ++E RE   
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKK 193

Query: 184 ARRREHRQRND 194
            R++E R++ +
Sbjct: 194 ERKKERRKKKE 204



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 32/165 (19%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 59  EPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG 118
           E  R   R  R +   R   K++ +  G++ K  R KR R       + ++E++   RR 
Sbjct: 33  ESERKKERREREKR-KREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91

Query: 119 REDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEE 178
           +E R+ ++  ++  R+ R     + +    +R   N++    + + R +  +  + + E+
Sbjct: 92  KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151

Query: 179 REFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
                 R+R+ R++        E +E         ++KE   KE+
Sbjct: 152 ERGKRERKRKKRKK--------EEREKKRERNRKERKKERERKER 188



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 30/166 (18%), Positives = 71/166 (42%), Gaps = 12/166 (7%)

Query: 58  SEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRR 117
           S+P        +     R   K++ +   +R +  + K+ R       K ++ +E   +R
Sbjct: 26  SKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRK------KRERGKERERKR 79

Query: 118 GREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEE 177
              ++Q +E  E+E R+ +   + R R    +R    ++      + ++R+ +N Q +E 
Sbjct: 80  KEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKK------ERKERERENKQRRER 133

Query: 178 EREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
           +R+    ++R   ++ +   G  E +    +     K++E   KE+
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKER 179


>gi|50083281 KIAA1853 protein [Homo sapiens]
          Length = 611

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 50/190 (26%), Positives = 73/190 (38%), Gaps = 21/190 (11%)

Query: 44  RRPDHSGGSPSPPTSEP-ARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNR-SPH 101
           R   HS  SP+P  S    +S    +  R  SRSP    +  SG+RS   RS R+R SP 
Sbjct: 399 RSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSP--SYSSKSGKRSPPSRSSRSRRSPS 456

Query: 102 HSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHR----GHSHQRRTSNER- 156
           +S     +ER+  P+   +D Q RE      RR   S   + R     H   RR ++ R 
Sbjct: 457 YSRYSPSRERD--PKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARK 514

Query: 157 ----------PGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELV 206
                       SG          +  ++   R +  +R R   +R       S S    
Sbjct: 515 RPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRS 574

Query: 207 PRPGGNNKEK 216
           P PG  ++ +
Sbjct: 575 PSPGSRSRSR 584



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 25/147 (17%)

Query: 30  KQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRAR-----GVSRSPPKKKNKA 84
           ++++   E+         H      PP+S   +   +  R +       S SP KKK K 
Sbjct: 78  ERDKTCRELGATRGHSASHDKDLTPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKK 137

Query: 85  SGRR--------------SKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQ 130
           S ++              S SP+SKR     H     K++    PR+    R HR PS  
Sbjct: 138 SSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRH-----KKQSRSRPRKSHRHRHHRCPSRS 192

Query: 131 EHRRAR-NSDRDRHRGHSHQRRTSNER 156
           +   +R +S   RHRG S +    + R
Sbjct: 193 QSSESRPSSCESRHRGRSPEEGQKSRR 219



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 61/250 (24%), Positives = 84/250 (33%), Gaps = 44/250 (17%)

Query: 5   KSERERGSRRRH---RDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
           K+ RE G+ R H    D D+  P     K+++          +R   S  SPSP   +  
Sbjct: 81  KTCRELGATRGHSASHDKDLTPPPSSRGKKKKKKST----RKKRRRSSSYSPSPVKKKKK 136

Query: 62  RSGHRGNRARGVSR------SPPKKKNKASGRRSKSPRS---KRNRSPHHSTVKVKQERE 112
           +S  +  R R  S+      S PK K +   R  K  RS   K +R  HH      Q  E
Sbjct: 137 KSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSE 196

Query: 113 DHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGS------------- 159
             P       + R P E +  R R+S R             + RP S             
Sbjct: 197 SRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTLCKDSPEAQSSRPPSQPLQMLGYLSARG 256

Query: 160 ---GQGQGRDRDTQNLQAQEEEREFYNARRREHRQRND--------VGGGGSESQELVPR 208
              G G   D  T+        R     R +E+   ND             S  QE    
Sbjct: 257 VITGSGSAADLFTKTASPLTTSR----GRSQEYDSGNDTSSPPSTQTSSARSRGQEKGSP 312

Query: 209 PGGNNKEKEV 218
            GG +K +E+
Sbjct: 313 SGGLSKSREL 322



 Score = 33.1 bits (74), Expect = 0.45
 Identities = 33/142 (23%), Positives = 48/142 (33%), Gaps = 20/142 (14%)

Query: 47  DHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVK 106
           D    + SPP+++ + +  RG      S    K +   SG  S S  S    SP +    
Sbjct: 286 DSGNDTSSPPSTQTSSARSRGQEKGSPSGGLSKSRELNSGNTSDSGNSFTTSSPQNKGAM 345

Query: 107 VKQEREDHPRRGREDRQHREP------------------SEQEHRRARNSDRDRHRGHSH 148
           +  E      RGRE R  + P                  S      +R+S     R  SH
Sbjct: 346 L--ENLSPTSRGRESRGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRSSSYASTRSSSH 403

Query: 149 QRRTSNERPGSGQGQGRDRDTQ 170
             R+ N R      Q R   ++
Sbjct: 404 SSRSPNPRASPRYTQSRSTSSE 425



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 40/157 (25%), Positives = 55/157 (35%), Gaps = 42/157 (26%)

Query: 7   ERERGSRRRH---------RDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPT 57
           ERER  RRR          RD    L A  +    +      P  + RP  S       T
Sbjct: 479 ERERARRRRRSYSPMRKRRRDSPSHLEARRITSARK-----RPIPYYRPSPSSSGSLSST 533

Query: 58  SEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRR 117
           S    S +  + +R  SRS  + ++     RS+S R  R R+   S+             
Sbjct: 534 S----SWYSSSSSRSASRSYSRSRS-----RSRSRRRSRTRTSSSSS------------- 571

Query: 118 GREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSN 154
                  R PS     R+R+  R R R  S  R  S+
Sbjct: 572 ------SRSPSPGSRSRSRSRSRSRSRSRSQSRSYSS 602



 Score = 30.4 bits (67), Expect = 2.9
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 56  PTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQE--RED 113
           PTS    S  RG ++  +  +  KK +        SP    +RS  +++ +      R  
Sbjct: 351 PTSRGRES--RGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRSSSYASTRSSSHSSRSP 408

Query: 114 HPRRGREDRQHREPSEQEHRRARNSDRDRHRG-HSHQRRTSNERPG---SGQGQGRDRDT 169
           +PR      Q R  S ++   +R+       G  S   R+S  R     S     R+RD 
Sbjct: 409 NPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDP 468

Query: 170 QNLQ--AQEEEREFYNARRREH 189
           +  +  +Q+ ERE    RRR +
Sbjct: 469 KYSEKDSQQRERERARRRRRSY 490


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)

Query: 75  RSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRR 134
           R   +K+ +   R  +  R +R R       + +++ ++  R    DR      E++  R
Sbjct: 302 RQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDR 361

Query: 135 ARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRND 194
            R  DRDR R  S  R     R    + + RDR+ +  + +E ERE    R RE  +  +
Sbjct: 362 DRERDRDRDRERSSDRNKDRSR---SREKSRDRERERERERERERERERERERERERERE 418



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)

Query: 68  NRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREP 127
           ++ R   +   ++K K    R +  + +R R       + ++ERE    R RE  + RE 
Sbjct: 282 SKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERE----RERERERERE- 336

Query: 128 SEQEHRRARNSDRDRHRGHSHQRRTSNERP-------GSGQGQGRDRDTQNLQAQEEERE 180
            E+E  R R  DRDR R     R    ER         S + + R R  +  + +E ERE
Sbjct: 337 KEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERE 396

Query: 181 FYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFE 227
               R RE R+R        E +    R    +K+++    E+ ++E
Sbjct: 397 RERERERE-REREREREREREREREREREREKDKKRDREEDEEDAYE 442



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 5/168 (2%)

Query: 30  KQERLSPEVAP--PAHRRPDHSGGSPSPPTSE--PARSGHRGNRARGVSRSPPKKKNKAS 85
           K++ +S E++     H++ +   G       E    R      R R   R   +++ +  
Sbjct: 273 KRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERE 332

Query: 86  GRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRG 145
             R K    +R R       + K+   D  R    DR     S++   R+R+ ++ R R 
Sbjct: 333 REREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRE 392

Query: 146 HSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRN 193
              +R    ER    + + R+R+ +  + +E ERE    R RE  + +
Sbjct: 393 RERERERERERERERERE-REREREREREREREREKDKKRDREEDEED 439



 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 9/178 (5%)

Query: 59  EPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG 118
           E  R   R  R R   R   ++K K   R  +  R  R+R+      + ++   D  R  
Sbjct: 315 ERERERERREREREREREREREKEKERERERERDRD-RDRTKERDRDRDRERDRDRDRER 373

Query: 119 REDR-----QHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQ 173
             DR     + RE S ++  R R  +R+R R    +R    ER    + +      +   
Sbjct: 374 SSDRNKDRSRSREKS-RDREREREREREREREREREREREREREREREREREREKDKKRD 432

Query: 174 AQEEEREFYNARRREHRQRNDVGGGGS--ESQELVPRPGGNNKEKEVPAKEKPSFELS 229
            +E+E + Y  R+ E + R          ++ E+  R      EKE   +E+   E++
Sbjct: 433 REEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMA 490



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 14/93 (15%)

Query: 106 KVKQEREDHPR----RGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQ 161
           ++ + R+ H +    +G+++++ +E  ++   R R  +R+R R    +R    ER     
Sbjct: 280 EISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERER---RERERERERE---- 332

Query: 162 GQGRDRDTQNLQAQEEEREFYNARRREHRQRND 194
              R+R+ +  + +E ER+    R +E  +  D
Sbjct: 333 ---REREKEKERERERERDRDRDRTKERDRDRD 362



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/82 (18%), Positives = 36/82 (43%)

Query: 107 VKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRD 166
           ++ E +      RE  + R+  ++        +++R      +R    ER    + + R+
Sbjct: 267 IEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERE 326

Query: 167 RDTQNLQAQEEEREFYNARRRE 188
           R+ +  + +E+E+E    R R+
Sbjct: 327 REREREREREKEKERERERERD 348


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 23/203 (11%)

Query: 43   HRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR-RSKSPRSKRNRSPH 101
            H + + + G   P T    R G R  +AR  SR    ++ + + R    S R  R  S H
Sbjct: 3717 HEQSESAHGRAGPSTG--GRQGSRHEQARDSSRHSASQEGQDTIRGHPGSRRGGRQGSYH 3774

Query: 102  HSTVKVKQEREDH----PRRGREDRQH-----REPSEQEHRRARNSDRDRHRGHSHQRRT 152
              +V        H      +GR D  H     R  S +     ++ D  RH G  H   +
Sbjct: 3775 EQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEAS 3834

Query: 153  ----SNERPGSGQGQG----RDRDTQNLQAQEEEREFY---NARRREHRQRNDVGGGGSE 201
                S+    SGQG+     R R   +  +Q+ + E Y   + RR E   RN  G    +
Sbjct: 3835 TQADSSRHSQSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDSERRSESASRNHHGSSREQ 3894

Query: 202  SQELVPRPGGNNKEKEVPAKEKP 224
            S++    PG ++++     +  P
Sbjct: 3895 SRDGSRHPGSSHRDTASHVQSSP 3917



 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 32/145 (22%)

Query: 63   SGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQERED--HPRRGRE 120
            SG R +R RG S S   + + + G    S R   + S +H     +Q R+   HPR   E
Sbjct: 2231 SGPRTSRPRGSSVS---QDSDSEGHSEDSERRSGSASRNHHGSAQEQSRDGSRHPRSHHE 2287

Query: 121  DR---------------QHREPSE-----QEHRRARNSDRDRHRGHSHQRRTSNERPGSG 160
            DR                H E S        H +AR+S  +RH  H  Q   S+   G G
Sbjct: 2288 DRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGIG 2347

Query: 161  QGQG----RD---RDTQNLQAQEEE 178
             GQ     RD   R +   QA + E
Sbjct: 2348 HGQASSAVRDSGHRGSSGSQASDSE 2372



 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 47/186 (25%), Positives = 67/186 (36%), Gaps = 31/186 (16%)

Query: 43  HRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR-RSKSPRSKRNRSPH 101
           H +PD + G     TS   R G    +AR  SR    ++ + + R    S R  R  S H
Sbjct: 475 HEQPDSAHGRTG--TSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHH 532

Query: 102 HSTVKVKQEREDH----PRRGREDRQH-----REPSEQEHRRARNSDRDRHRGHSH---- 148
             +V        H      +GR D  H     R  S Q     ++ D  RH G  H    
Sbjct: 533 EQSVNRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRNEEQSGDGTRHSGSRHHEAS 592

Query: 149 ------------QRRTSNERPGSGQGQ--GRDRDTQNLQAQEEEREFYNARRREHRQRND 194
                       Q ++S  R    QG    +D D+Q   +++ ER   +A R  H    +
Sbjct: 593 SQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQG-HSEDSERWSGSASRNHHGSAQE 651

Query: 195 VGGGGS 200
               GS
Sbjct: 652 QSRDGS 657



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 49/210 (23%), Positives = 70/210 (33%), Gaps = 56/210 (26%)

Query: 48   HSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKAS---------GRRSKSPR--SKR 96
            HSG      +S    SGH     +G S  P   +N  S         G    S R     
Sbjct: 2529 HSGSRHHEASSRADSSGH-SQVGQGQSEGPRTSRNWGSSFSQDSDSQGHSEDSERWSGSA 2587

Query: 97   NRSPHHSTVKVKQEREDHPRRGREDR---------------QHREPSE-----QEHRRAR 136
            +R+ H S  +  ++   HPR  +EDR               +H + S        H +AR
Sbjct: 2588 SRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQAR 2647

Query: 137  NSDRDRHRGHSHQRRTSNERPGSGQGQ------------------------GRDRDTQNL 172
            +S  +RH  H  Q   S+   G G GQ                          D DTQ++
Sbjct: 2648 SSAGERHGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDNEGHSEDSDTQSV 2707

Query: 173  QAQEEEREFYNARRREHRQRNDVGGGGSES 202
             A  +      + +   R R+    G S S
Sbjct: 2708 SAHGQAGSHQQSHQESARGRSGETSGHSGS 2737



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 45/198 (22%), Positives = 72/198 (36%), Gaps = 41/198 (20%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            SER  GS  R+  G           QE+L      P   + D +G   S  +S  + + H
Sbjct: 2904 SERWSGSASRNHHGSA---------QEQLRDGSRHPRSHQEDRAGHGHSADSSRQSGTRH 2954

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
                + G + S  ++   ++G R  S   +   S  HS +                    
Sbjct: 2955 TQTSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGI-------------------- 2994

Query: 126  EPSEQEHRRARNSDRDR-HRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNA 184
                  H +A ++ RD  HRG+S  + + NE      G   D DTQ++ A  +      +
Sbjct: 2995 -----GHGQASSAVRDSGHRGYSGSQASDNE------GHSEDSDTQSVSAHGQAGSHQQS 3043

Query: 185  RRREHRQRNDVGGGGSES 202
             +   R R+    G S S
Sbjct: 3044 HQESARGRSGETSGHSGS 3061



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 45/209 (21%), Positives = 69/209 (33%), Gaps = 18/209 (8%)

Query: 37   EVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARG----VSRSPPKKKNKASGRRSKSP 92
            E +  AH R   S G       E AR   R + ++     +   P   +    G   +  
Sbjct: 1773 EQSESAHGRTGPSTGGRQRSRHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHYEQS 1832

Query: 93   RSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSH---- 148
                  S  H +    QER D     R     R  S Q     ++ D  RH G  H    
Sbjct: 1833 VDSSGHSGSHHSHTTSQERSD---VSRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEAS 1889

Query: 149  QRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQ-------RNDVGGGGSE 201
             R  S+     GQGQ     T   Q     ++  +    E  +       RN +G    +
Sbjct: 1890 SRADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHLGSAWEQ 1949

Query: 202  SQELVPRPGGNNKEKEVPAKEKPSFELSG 230
            S++    PG +++++        S   SG
Sbjct: 1950 SRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 41/174 (23%), Positives = 58/174 (33%), Gaps = 33/174 (18%)

Query: 62  RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVK------VKQERED-- 113
           RSG R  R+          K   S      P +   +  HH   +        Q+ +D  
Sbjct: 782 RSGERSRRSGSFLYQVSTHKQSESSHGWTGPSTGVRQGSHHEQARDNSRHSASQDGQDTI 841

Query: 114 --HP---RRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQ----G 164
             HP   RRGR+   H +          + DR  H G  H   TS  R  + +GQ     
Sbjct: 842 RGHPGSSRRGRQGSHHEQ----------SVDRSGHSGSHHSHTTSQGRSDASRGQSGSRS 891

Query: 165 RDRDTQNLQAQEEEREFYNARRREHRQRNDV------GGGGSESQELVPRPGGN 212
             R T+N +   +      +R  E     D+      G G SE      R G +
Sbjct: 892 ASRTTRNEEQSRDGSRHSGSRHHEASSHADISRHSQAGQGQSEGSRTSRRQGSS 945



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 52/240 (21%), Positives = 87/240 (36%), Gaps = 44/240 (18%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            SER  GS  R+  G           QE+       P     D +G   S  +S  + + H
Sbjct: 2256 SERRSGSASRNHHGSA---------QEQSRDGSRHPRSHHEDRAGHGHSAESSRQSGTHH 2306

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTV---KVKQEREDHPRRGREDR 122
              N + G + S  ++   ++G R  S   +   S  HS +   +      D   RG    
Sbjct: 2307 AENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGSSGS 2366

Query: 123  Q------HREPSE-----------------QEHRRARNSDRDRHRGHSHQRRTSNERPGS 159
            Q      H E S+                 QE  R R++ R    G    + +++E+  S
Sbjct: 2367 QASDSEGHSEDSDTQSVSAHGQAGPHQQSHQESTRGRSAGRSGRSGSFLYQVSTHEQSES 2426

Query: 160  GQGQ-----GRDRDTQNLQAQEEEREFYNARRRE----HRQRNDVGGGGSESQELVPRPG 210
              G+     G  + + + QA++  R   +   ++    H   +  G  GS  ++LV R G
Sbjct: 2427 AHGRTGTSTGGRQGSHHKQARDSSRHSTSQEGQDTIHGHPGSSSGGRQGSHYEQLVDRSG 2486



 Score = 38.5 bits (88), Expect = 0.011
 Identities = 43/200 (21%), Positives = 69/200 (34%), Gaps = 31/200 (15%)

Query: 57   TSEPARSGHRGNRARGVSRSPPKKKNKASGRRSK-SPRSKRNRSPHHSTVKVKQEREDH- 114
            TS   R G    +AR  SR    ++ + + R    S R  R  S H  +V        H 
Sbjct: 1136 TSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHPGSRRGGRQGSHHEQSVDRSGHSGSHH 1195

Query: 115  ---PRRGREDRQH-----REPSEQEHRRARNSDRDRHRGHSH----------------QR 150
                 +GR D  H     R  S Q  +  ++ D  RH G  H                Q 
Sbjct: 1196 SHTTSQGRSDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAASWADSSRHSQVGQE 1255

Query: 151  RTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPG 210
            ++S  R    QG    +D+ + +  ++      +  R H      G    +S++    PG
Sbjct: 1256 QSSGSRTSRHQGSSVSQDSDSERHSDDSERLSGSASRNHH-----GSSREQSRDGSRHPG 1310

Query: 211  GNNKEKEVPAKEKPSFELSG 230
             + +++        S   SG
Sbjct: 1311 FHQEDRASHGHSADSSRQSG 1330



 Score = 38.1 bits (87), Expect = 0.014
 Identities = 39/140 (27%), Positives = 50/140 (35%), Gaps = 27/140 (19%)

Query: 47   DHSGGSPSPPTSEPARSGHRGNRARGVS-----RSPPKKKNKASGRRSKSPRSKRNRSPH 101
            D SGG          RSG  G+    VS      S   +   ++GRR  S   +   S  
Sbjct: 3374 DRSGG----------RSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSR 3423

Query: 102  HSTVKVKQER-EDHPRRGREDRQ--HREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPG 158
            HS  +  Q+    HP   R  RQ  H E S          DR  H G  H   TS  R  
Sbjct: 3424 HSASQEGQDTIRGHPGSSRRGRQGSHYEQSV---------DRSGHSGSHHSHTTSQGRSD 3474

Query: 159  SGQGQGRDRDTQNLQAQEEE 178
            + +GQ   R        +E+
Sbjct: 3475 ASRGQSGSRSASRQTRNDEQ 3494



 Score = 38.1 bits (87), Expect = 0.014
 Identities = 42/159 (26%), Positives = 55/159 (34%), Gaps = 38/159 (23%)

Query: 58   SEPARSGHRGNRARGVSRSPPKKKNKAS---------GRRSKSPRSKRNRSPHHSTVKVK 108
            S  A S       +G S  P   +N+ S         G    S R   + S +H     +
Sbjct: 3510 STQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHRGSAQE 3569

Query: 109  QERED--HPRRGREDR---------------QHREPSE-----QEHRRARNSDRDRHRGH 146
            Q R+   HP    EDR                H E S        H +AR+S  +RH  H
Sbjct: 3570 QSRDGSRHPTSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSH 3629

Query: 147  SHQRRTSNERPGSGQGQG----RD---RDTQNLQAQEEE 178
              Q   S+   G G GQ     RD   R +   QA + E
Sbjct: 3630 HQQSADSSRHSGIGHGQASSAVRDSGHRGSSGSQASDSE 3668



 Score = 37.7 bits (86), Expect = 0.018
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 15/150 (10%)

Query: 64   GHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQ 123
            G    ++R  SR P       +G    +  S+++ + H  +    Q    H  + R    
Sbjct: 1944 GSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSGTRHTESSSRGQAASSH-EQARSSAG 2002

Query: 124  HREPSEQEHRRARNSDRDRHRGHSHQR-----RTSNERPGSG------QGQGRDRDTQNL 172
             R  S   H + +++D  RH G  H +     R S  R  SG      +G   D DTQ++
Sbjct: 2003 ERHGS---HHQLQSADSSRHSGIGHGQASSAVRDSGHRGYSGSQASDSEGHSEDSDTQSV 2059

Query: 173  QAQEEEREFYNARRREHRQRNDVGGGGSES 202
             AQ +      + +   R ++    G S S
Sbjct: 2060 SAQGKAGPHQQSHKESARGQSGESSGRSGS 2089



 Score = 37.4 bits (85), Expect = 0.024
 Identities = 51/240 (21%), Positives = 82/240 (34%), Gaps = 44/240 (18%)

Query: 6   SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
           SER  GS  R+  G            E+       P     D +    S  +S  + + H
Sbjct: 310 SERHSGSASRNHHGSA---------WEQSRDGSRHPRSHDEDRASHGHSADSSRQSGTRH 360

Query: 66  RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTV---KVKQEREDHPRRGREDR 122
               +RG + S  ++   + G R  S   +   S  HS     +      D   RG    
Sbjct: 361 AETSSRGQTASSHEQARSSPGERHGSGHQQSADSSRHSATGRGQASSAVSDRGHRGSSGS 420

Query: 123 QH-----------------------REPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGS 159
           Q                        R+ S QE  R R+ +R    G S  + +++E+P S
Sbjct: 421 QASDSEGHSENSDTQSVSGHGKAGLRQQSHQESTRGRSGERSGRSGSSLYQVSTHEQPDS 480

Query: 160 GQGQ-----GRDRDTQNLQAQEEEREFYNARR----REHRQRNDVGGGGSESQELVPRPG 210
             G+     G  + + + QA++  R   +       R H   +  G  GS  ++ V R G
Sbjct: 481 AHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHHEQSVNRSG 540



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 17/125 (13%)

Query: 62   RSGHRGNRARGVS-----RSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQER-EDHP 115
            RSG  G+    VS      S   +   ++GRR  S   +   S  HS  +  Q+    HP
Sbjct: 1110 RSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHP 1169

Query: 116  --RRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQ 173
              RRG     H E S          DR  H G  H   TS  R  +  GQ   R      
Sbjct: 1170 GSRRGGRQGSHHEQSV---------DRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQT 1220

Query: 174  AQEEE 178
             ++++
Sbjct: 1221 RKDKQ 1225



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 50/238 (21%), Positives = 81/238 (34%), Gaps = 20/238 (8%)

Query: 5    KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRP--------DHSGGSPSPP 56
            +S R+R   R  R G  +       + E           RR         D S  S S  
Sbjct: 3370 ESARDRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQE 3429

Query: 57   TSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR 116
              +  R GH G+  RG   S  ++    SG  S S  S           + +       R
Sbjct: 3430 GQDTIR-GHPGSSRRGRQGSHYEQSVDRSGH-SGSHHSHTTSQGRSDASRGQSGSRSASR 3487

Query: 117  RGREDRQHREPSEQE----HRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNL 172
            + R D Q  + S       H  +  +D  RH   S Q +++  R    QG    +D+ + 
Sbjct: 3488 QTRNDEQSGDGSRHSWSHHHEASTQADSSRH-SQSGQGQSAGPRTSRNQGSSVSQDSDSQ 3546

Query: 173  QAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSG 230
               E+   +  +  R HR     G    +S++    P  +++++        S   SG
Sbjct: 3547 GHSEDSERWSGSASRNHR-----GSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599



 Score = 37.0 bits (84), Expect = 0.031
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 18/157 (11%)

Query: 45   RPDHSGGSPSPPTSEP-ARSGHRGNRARGVSRSPPKKKNKASGRRSKSPR---------- 93
            R  HSG   S  TS+  + + H  + +R  SR    ++    G R    R          
Sbjct: 3780 RSGHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEASTQADS 3839

Query: 94   SKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTS 153
            S+ ++S    +   ++ R       ++      P + E RR+ ++ R+ H     Q R  
Sbjct: 3840 SRHSQSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDSE-RRSESASRNHHGSSREQSRDG 3898

Query: 154  NERPGSGQGQGRDRDT-QNLQAQEEEREFYNARRREH 189
            +  PGS       RDT  ++Q+   + +   A+   H
Sbjct: 3899 SRHPGSSH-----RDTASHVQSSPVQSDSSTAKEHGH 3930



 Score = 36.6 bits (83), Expect = 0.041
 Identities = 50/246 (20%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 5    KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRP--------DHSGGSPSPP 56
            +S R+R   R  R G  +       + E       P    R         D+S  S S  
Sbjct: 777  ESARDRSGERSRRSGSFLYQVSTHKQSESSHGWTGPSTGVRQGSHHEQARDNSRHSASQD 836

Query: 57   TSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR 116
              +  R GH G+  RG   S  ++    SG  S S  S           + +       R
Sbjct: 837  GQDTIR-GHPGSSRRGRQGSHHEQSVDRSGH-SGSHHSHTTSQGRSDASRGQSGSRSASR 894

Query: 117  RGREDRQHREPSE----QEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNL 172
              R + Q R+ S     + H  + ++D  RH   + Q ++   R    QG    +D+ + 
Sbjct: 895  TTRNEEQSRDGSRHSGSRHHEASSHADISRH-SQAGQGQSEGSRTSRRQGSSVSQDSDSE 953

Query: 173  QAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFELSGAL 232
               E+   +  +  R HR     G    +S+     P  +++++        S   SG  
Sbjct: 954  GHSEDSERWSGSASRNHR-----GSAQEQSRHGSRHPRSHHEDRAGHGHSADSSRQSGTP 1008

Query: 233  LEDTNT 238
              +T++
Sbjct: 1009 HAETSS 1014



 Score = 36.6 bits (83), Expect = 0.041
 Identities = 43/178 (24%), Positives = 57/178 (32%), Gaps = 29/178 (16%)

Query: 45   RPDHSGGSPSPPTSEPARSGHRGNR-ARGVSRSPPKKKNKASGRRSKSPR----SKRNRS 99
            R  HSG   S  TS+      RG   +R  SR    K+    G R         S    S
Sbjct: 2160 RSGHSGSHHSHTTSQGRSDASRGQSGSRSASRKTYDKEQSGDGSRHSGSHHHEASSWADS 2219

Query: 100  PHHSTVKVKQEREDHPRRGR-----EDRQHREPSEQEHRRARNSDRDRHR--------GH 146
              HS V   Q       R R     +D      SE   RR+ ++ R+ H         G 
Sbjct: 2220 SRHSLVGQGQSSGPRTSRPRGSSVSQDSDSEGHSEDSERRSGSASRNHHGSAQEQSRDGS 2279

Query: 147  SHQRRTSNERPGSGQGQGRDRDT-----------QNLQAQEEEREFYNARRREHRQRN 193
             H R    +R G G      R +           Q   + E+ R     R   H Q++
Sbjct: 2280 RHPRSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQS 2337



 Score = 36.6 bits (83), Expect = 0.041
 Identities = 44/198 (22%), Positives = 70/198 (35%), Gaps = 41/198 (20%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            SER  GS  R+  G           QE+       P     D +G   S  +S  + + H
Sbjct: 3552 SERWSGSASRNHRGSA---------QEQSRDGSRHPTSHHEDRAGHGHSAESSRQSGTHH 3602

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
              N + G + S  ++   ++G R  S   +   S  HS +                    
Sbjct: 3603 AENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHSGI-------------------- 3642

Query: 126  EPSEQEHRRARNSDRDR-HRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNA 184
                  H +A ++ RD  HRG S  + + +E      G   D DTQ++ A  +      +
Sbjct: 3643 -----GHGQASSAVRDSGHRGSSGSQASDSE------GHSEDSDTQSVSAHGQAGPHQQS 3691

Query: 185  RRREHRQRNDVGGGGSES 202
             +   R R+    G S S
Sbjct: 3692 HQESTRGRSAGRSGRSGS 3709



 Score = 36.2 bits (82), Expect = 0.053
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 28/155 (18%)

Query: 57  TSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR 116
           TS+      R  + RG SR    + ++     S+      +R+ H S  +  ++   HPR
Sbjct: 279 TSQVPLQESRTRKRRG-SRVSQDRDSEGHSEDSERHSGSASRNHHGSAWEQSRDGSRHPR 337

Query: 117 RGREDR---------------QHREPSEQ-----EHRRARNSDRDRHRGHSHQRRTSNER 156
              EDR               +H E S +      H +AR+S  +RH     Q   S+  
Sbjct: 338 SHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHEQARSSPGERHGSGHQQSADSSRH 397

Query: 157 PGSGQGQGRD-------RDTQNLQAQEEEREFYNA 184
             +G+GQ          R +   QA + E    N+
Sbjct: 398 SATGRGQASSAVSDRGHRGSSGSQASDSEGHSENS 432



 Score = 36.2 bits (82), Expect = 0.053
 Identities = 51/253 (20%), Positives = 79/253 (31%), Gaps = 49/253 (19%)

Query: 2    KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
            +A  S  ER   R  +  D    +G+  +Q       A  A R   H G S S  T+   
Sbjct: 1348 QARSSPGERHGSRHQQSADSSRHSGIGHRQ-------ASSAVRDSGHRGSSGSQVTNSEG 1400

Query: 62   RSGHRGNRARGV--SRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRR-- 117
             S     ++        P ++ +K S R      S R+RS  +     +Q    H +   
Sbjct: 1401 HSEDSDTQSVSAHGQAGPHQQSHKESARGQSGESSGRSRSFLYQVSSHEQSESTHGQTAP 1460

Query: 118  ---GREDRQHREPSEQEHRRA-------------------------RNSDRDRHRGHSHQ 149
               GR+  +H +        A                         ++ DR  H G+ H 
Sbjct: 1461 STGGRQGSRHEQARNSSRHSASQDGQDTIRGHPGSSRGGRQGSYHEQSVDRSGHSGYHHS 1520

Query: 150  RRTSNERPGSGQGQGRDRDTQNLQAQEEE----------REFYNARRREHRQRNDVGGGG 199
              T   R  +  GQ   R        EE+          R    + R    + + VG G 
Sbjct: 1521 HTTPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEPSTRAGSSRHSQVGQGE 1580

Query: 200  SESQELVPRPGGN 212
            S   +   R G +
Sbjct: 1581 SAGSKTSRRQGSS 1593



 Score = 35.8 bits (81), Expect = 0.069
 Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 41/198 (20%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            SER  GS  R+  G           +E+       P   + D +    S  +S  + + H
Sbjct: 1283 SERLSGSASRNHHGS---------SREQSRDGSRHPGFHQEDRASHGHSADSSRQSGTHH 1333

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
              + + G + S  ++   + G R  S   +   S  HS +                    
Sbjct: 1334 TESSSHGQAVSSHEQARSSPGERHGSRHQQSADSSRHSGI-------------------- 1373

Query: 126  EPSEQEHRRARNSDRDR-HRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNA 184
                  HR+A ++ RD  HRG S  + T++E      G   D DTQ++ A  +      +
Sbjct: 1374 -----GHRQASSAVRDSGHRGSSGSQVTNSE------GHSEDSDTQSVSAHGQAGPHQQS 1422

Query: 185  RRREHRQRNDVGGGGSES 202
             +   R ++    G S S
Sbjct: 1423 HKESARGQSGESSGRSRS 1440



 Score = 35.4 bits (80), Expect = 0.091
 Identities = 40/176 (22%), Positives = 59/176 (33%), Gaps = 18/176 (10%)

Query: 45   RPDHSGGSPSPPTSEPARSGHRGNRA-RGVSRSPPKKKNKASGRRSKSPR----SKRNRS 99
            R  HSG   S  T +       G    R  SR    ++    G R    R    S R  S
Sbjct: 1511 RSGHSGYHHSHTTPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEPSTRAGS 1570

Query: 100  PHHSTVKVKQEREDHPRRGR-----EDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSN 154
              HS V   +       R +     +DR     SE   RR+ ++ R+ +     Q R  +
Sbjct: 1571 SRHSQVGQGESAGSKTSRRQGSSVSQDRDSEGHSEDSERRSESASRNHYGSAREQSRHGS 1630

Query: 155  ERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPG 210
              P S Q    DR +    A+   +         H + +  G   S  ++    PG
Sbjct: 1631 RNPRSHQ---EDRASHGHSAESSRQS-----GTRHAETSSGGQAASSQEQARSSPG 1678



 Score = 35.4 bits (80), Expect = 0.091
 Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 17/154 (11%)

Query: 74   SRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQER-EDHPRRGREDRQHREPSEQEH 132
            S S   +   ++G R  S   +   S  HS  +  Q+    HP   R  RQ    S QE 
Sbjct: 2100 SESTHGQSAPSTGGRQGSHYDQAQDSSRHSASQEGQDTIRGHPGPSRGGRQG---SHQE- 2155

Query: 133  RRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEE---------REFYN 183
               ++ DR  H G  H   TS  R  + +GQ   R        +E+            + 
Sbjct: 2156 ---QSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRKTYDKEQSGDGSRHSGSHHHE 2212

Query: 184  ARRREHRQRNDVGGGGSESQELVPRPGGNNKEKE 217
            A       R+ + G G  S     RP G++  ++
Sbjct: 2213 ASSWADSSRHSLVGQGQSSGPRTSRPRGSSVSQD 2246



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 57/230 (24%), Positives = 84/230 (36%), Gaps = 23/230 (10%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSP-EVAPPAHRRP-DHSGGSPSPPTSEPARS 63
            +E  R S  RH +      A    +Q R SP E     H++  D S  S +    + +  
Sbjct: 1647 AESSRQSGTRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSSTDSGTGRRQDSSVV 1706

Query: 64   GHRGNR-ARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDR 122
            G  GNR + G   S  +  ++ S  +S S   +    PH  + +     +   R GR   
Sbjct: 1707 GDSGNRGSSGSQASDSEGHSEESDTQSVSAHGQAG--PHQQSHQESTRGQSGERSGRSGS 1764

Query: 123  -----QHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQ-------GRDRDTQ 170
                    E SE  H R   S   R R    Q R S+    S +GQ       G  R  +
Sbjct: 1765 FLYQVSTHEQSESAHGRTGPSTGGRQRSRHEQARDSSRHSASQEGQDTIRGHPGSSRGGR 1824

Query: 171  NLQAQEEEREFYNARRREH-----RQRNDVGGGGSESQELVPRPGGNNKE 215
                 E+  +        H     ++R+DV  G S S+  V R   N K+
Sbjct: 1825 QGSHYEQSVDSSGHSGSHHSHTTSQERSDVSRGQSGSRS-VSRQTRNEKQ 1873



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 24/149 (16%)

Query: 48   HSGGSPSPPTSEPARSGHRGNR-ARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTV- 105
            HSG   S  TS+      RG   +R  SR+   +  + SG  S+   S+ + +  H+ + 
Sbjct: 3135 HSGSHHSHTTSQGRSDASRGQSGSRSASRTT--RNEEQSGDSSRHSVSRHHEASTHADIS 3192

Query: 106  ---KVKQEREDHPRRGR----------------EDRQHREPSEQEHRRARNSDRDRHRGH 146
               +  Q + +  RR R                ED +    S   + R    ++ RH G 
Sbjct: 3193 RHSQAVQGQSEGSRRSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSVQEQSRH-GS 3251

Query: 147  SHQRRTSNERPGSGQGQGRDRDTQNLQAQ 175
             H R    +R G G    R R +    A+
Sbjct: 3252 RHPRSHHEDRAGHGHSADRSRQSGTRHAE 3280



 Score = 34.7 bits (78), Expect = 0.15
 Identities = 46/199 (23%), Positives = 65/199 (32%), Gaps = 56/199 (28%)

Query: 51  GSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKAS---------GRRSKSPRSKRNRSPH 101
           GS     S  A S       +G S  P   +N+ S         G    S R   + S +
Sbjct: 585 GSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRN 644

Query: 102 HSTVKVKQERED--HPRRGREDR---------------QHREPSEQ-----EHRRARNS- 138
           H     +Q R+   HPR   EDR               +H + S        H +AR+S 
Sbjct: 645 HHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSSGQAASSHEQARSSA 704

Query: 139 -------------DRDRHRGHSHQR-----RTSNERPGSG------QGQGRDRDTQNLQA 174
                        D  RH G  H +     R S  R  SG      +G   D DTQ++  
Sbjct: 705 GERHGSRHQLQSADSSRHSGTGHGQASSAVRDSGHRGSSGSQATDSEGHSEDSDTQSVSG 764

Query: 175 QEEEREFYNARRREHRQRN 193
             +      + +   R R+
Sbjct: 765 HGQAGHHQQSHQESARDRS 783



 Score = 34.3 bits (77), Expect = 0.20
 Identities = 30/123 (24%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 62  RSGHRGNRARGVSRSPP------KKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHP 115
           RSG  G+    VS          +      GR+       R+ S H ++ + +     HP
Sbjct: 461 RSGRSGSSLYQVSTHEQPDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHP 520

Query: 116 RRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQ 175
              R  RQ        H ++ N  R  H G  H   TS  R  +  GQ   R        
Sbjct: 521 GSSRGGRQG-----SHHEQSVN--RSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRN 573

Query: 176 EEE 178
           EE+
Sbjct: 574 EEQ 576



 Score = 34.3 bits (77), Expect = 0.20
 Identities = 43/165 (26%), Positives = 57/165 (34%), Gaps = 8/165 (4%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSP-EVAPPAHRRPDHSGGSPSPPTSEPARSG 64
            ++R R S  RH +      A    +Q R SP E     H++   S      P  + A S 
Sbjct: 3268 ADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRGQ-ASSA 3326

Query: 65   HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRS-PHHSTVKVKQEREDHPRRGREDR- 122
             R +R  G S S        S        S   ++ PH  + +         R GR    
Sbjct: 3327 VRDSRHWGSSGSQASDSEGHSEESDTQSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSF 3386

Query: 123  ----QHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQ 163
                   E SE  H R R S   R   H  Q R S+    S +GQ
Sbjct: 3387 LYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQ 3431



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 26/241 (10%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            SER  GS  R+  G           QE+       P     D +G   S  +S  + + H
Sbjct: 959  SERWSGSASRNHRGSA---------QEQSRHGSRHPRSHHEDRAGHGHSADSSRQSGTPH 1009

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
                + G + S  ++   + G R  S   +   S  HS +  +Q        G       
Sbjct: 1010 AETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRRQASSAVRDSGHWGSSGS 1069

Query: 126  EPSEQEHRRARNSDRDRHRGHS-----HQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
            + S+ E   +  SD     GH       Q    + R  SG   GR        +  E+ E
Sbjct: 1070 QASDSE-GHSEESDTQSVSGHGQDGPHQQSHQESARDWSGGRSGRSGSFIYQVSTHEQSE 1128

Query: 181  FYNARRR---------EHRQRNDVG--GGGSESQELVPRPGGNNKEKEVPAKEKPSFELS 229
              + R R          H Q  D        E Q+ +    G+ +     +  + S + S
Sbjct: 1129 SAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHPGSRRGGRQGSHHEQSVDRS 1188

Query: 230  G 230
            G
Sbjct: 1189 G 1189



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 31/121 (25%), Positives = 42/121 (34%), Gaps = 9/121 (7%)

Query: 48   HSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKV 107
            HSG      +S    SGHRG+     S S    +  +    ++S  +     PH  + + 
Sbjct: 3639 HSGIGHGQASSAVRDSGHRGSSGSQASDS----EGHSEDSDTQSVSAHGQAGPHQQSHQE 3694

Query: 108  KQEREDHPRRGREDR-----QHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQG 162
                    R GR           E SE  H RA  S   R      Q R S+    S +G
Sbjct: 3695 STRGRSAGRSGRSGSFLYQVSTHEQSESAHGRAGPSTGGRQGSRHEQARDSSRHSASQEG 3754

Query: 163  Q 163
            Q
Sbjct: 3755 Q 3755



 Score = 33.1 bits (74), Expect = 0.45
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 63   SGHRGNRARGVSRSPPKKKN------KASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR 116
            SGH G+    VS     + +         GR+       ++ S H ++   +     HP 
Sbjct: 2732 SGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHSASQDGQDTIRGHPG 2791

Query: 117  RGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
              R  RQ        +    + D   H G  H   TS  R  + +GQ   R        E
Sbjct: 2792 SSRGGRQG-------YHHEHSVDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNE 2844

Query: 177  EE 178
            E+
Sbjct: 2845 EQ 2846



 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 4/116 (3%)

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQH 124
           HR +          +++NK + +R  S   + NR  +    K  +E          +++ 
Sbjct: 101 HRKHSHHDKHEDNKQEENKENRKRPSSLERRNNRKGNKGRSKSPRETGGKRHESSSEKKE 160

Query: 125 REPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
           R+     HR         +     + +T N R     G  R R ++ L+ +E+  E
Sbjct: 161 RKGYSPTHREEEYGKNHHNSSKKEKNKTENTR----LGDNRKRLSERLEEKEDNEE 212



 Score = 32.7 bits (73), Expect = 0.59
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 63   SGHRGNRARGVSRSPPKKKN------KASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR 116
            SGH G+    VS     + +         GR+       ++ S H ++   +     HP 
Sbjct: 3056 SGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGSRHEQAQDSSRHSASQYGQDTIRGHPG 3115

Query: 117  RGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
              R  RQ        +    + D   H G  H   TS  R  + +GQ   R        E
Sbjct: 3116 SSRGGRQG-------YHHEHSVDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNE 3168

Query: 177  EE 178
            E+
Sbjct: 3169 EQ 3170



 Score = 32.3 bits (72), Expect = 0.77
 Identities = 37/152 (24%), Positives = 51/152 (33%), Gaps = 17/152 (11%)

Query: 62   RSGHRGNRARGVS-----RSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQER-EDHP 115
            RSG  G+    VS      S   +   ++G R  S   +   S  HST +  Q+    HP
Sbjct: 2407 RSGRSGSFLYQVSTHEQSESAHGRTGTSTGGRQGSHHKQARDSSRHSTSQEGQDTIHGHP 2466

Query: 116  RRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQG----QGRDRDTQN 171
                  RQ     +         DR  H G  H   TS  R  +  G    +   R T+N
Sbjct: 2467 GSSSGGRQGSHYEQLV-------DRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRN 2519

Query: 172  LQAQEEEREFYNARRREHRQRNDVGGGGSESQ 203
             +   +      +R  E   R D  G     Q
Sbjct: 2520 DEQSGDGSRHSGSRHHEASSRADSSGHSQVGQ 2551



 Score = 32.3 bits (72), Expect = 0.77
 Identities = 49/241 (20%), Positives = 77/241 (31%), Gaps = 26/241 (10%)

Query: 6    SERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGH 65
            SER  GS  R+  G V         QE+       P     D +G   S   S  + + H
Sbjct: 3228 SERWSGSASRNHRGSV---------QEQSRHGSRHPRSHHEDRAGHGHSADRSRQSGTRH 3278

Query: 66   RGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHR 125
                + G + S  ++   + G R  S   +   S  HS +  + +     R  R      
Sbjct: 3279 AETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIP-RGQASSAVRDSRHWGSSG 3337

Query: 126  EPSEQEHRRARNSDRDRHRGHS-----HQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
              +      +  SD     GH       Q    + R  SG   GR        +  E+ E
Sbjct: 3338 SQASDSEGHSEESDTQSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSFLYQVSTHEQSE 3397

Query: 181  FYNARRR---------EHRQRNDVG--GGGSESQELVPRPGGNNKEKEVPAKEKPSFELS 229
              + R R          H Q  D        E Q+ +    G+++     +  + S + S
Sbjct: 3398 SAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRRGRQGSHYEQSVDRS 3457

Query: 230  G 230
            G
Sbjct: 3458 G 3458



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 8/123 (6%)

Query: 111 REDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDT- 169
           +E+ P  G + R+H    + E  +   +  +R R  S +RR  N R G+       R+T 
Sbjct: 91  KENLPISGHKHRKHSHHDKHEDNKQEENKENRKRPSSLERR--NNRKGNKGRSKSPRETG 148

Query: 170 ---QNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELV--PRPGGNNKEKEVPAKEKP 224
                  ++++ER+ Y+   RE     +      + +      R G N K      +EK 
Sbjct: 149 GKRHESSSEKKERKGYSPTHREEEYGKNHHNSSKKEKNKTENTRLGDNRKRLSERLEEKE 208

Query: 225 SFE 227
             E
Sbjct: 209 DNE 211


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 13/177 (7%)

Query: 54  SPPTSEPARSGHRGNRARGV-SRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQERE 112
           S P ++P        R R + +R   KK+ ++  ++ +  R KR R       + + ++E
Sbjct: 26  SKPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKE 85

Query: 113 DHPRRGREDRQHR------EPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRD 166
               R +E+R+ +      E  E E +  R     + RG + +     ER    + + R 
Sbjct: 86  KKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERK 145

Query: 167 RDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
              +  + +E+ERE    ++RE +Q       G + +E   +     K++E   KE+
Sbjct: 146 ERERKKEEREKERERKERKKRERKQ------VGEKEEERKEKERKERKKRERNRKER 196



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 7/138 (5%)

Query: 62  RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRED 121
           + G R    R   +   +K+NK    + K  R K+ +     T K  +ERE    R RE+
Sbjct: 86  KKGERKKEERERKKRRREKENKEGEEKEK--RKKKEKKERGRTSKEGKERERKEERKREE 143

Query: 122 RQHRE--PSEQEHRRARNSDRDRHR---GHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
           R+ RE    E+E  R R   + R R   G   + R   ER    + +   ++ +  + ++
Sbjct: 144 RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERK 203

Query: 177 EEREFYNARRREHRQRND 194
           E RE    R+++  ++ +
Sbjct: 204 ERRERKKERKKKEERKKE 221



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 27/194 (13%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           K  RER  R+R R+ +         K+ER           + +  G           R  
Sbjct: 61  KERREREKRKREREKE--------RKRER----------GKKEKKGERKKEERERKKRRR 102

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSK-----RNRSPHHSTVKVKQERE-DHPRRG 118
            + N+         KK+ K  GR SK  + +     R R       + K+ERE +  R+ 
Sbjct: 103 EKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKE 162

Query: 119 REDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEE 178
           R+ R+ ++  E+E  R     ++R +   +++    ER    + + R+R  +  + +E +
Sbjct: 163 RKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERE---RKERRERKKERKKKEERK 219

Query: 179 REFYNARRREHRQR 192
           +E    R+   R++
Sbjct: 220 KERQKDRQTNWREK 233



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 25/177 (14%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           K ERER  RRR +              E    E      ++     G  S    E  R  
Sbjct: 92  KEERERKKRRREK--------------ENKEGEEKEKRKKKEKKERGRTSKEGKERERKE 137

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQH 124
            R    R   +   +KK +    R +  R KR R       +V ++ E+   + R++R+ 
Sbjct: 138 ERKREER---KERERKKEEREKERERKERKKRERK------QVGEKEEERKEKERKERKK 188

Query: 125 REPSEQEHR--RARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEER 179
           RE + +E +  R R   R+R +    +     ER    Q   R+++    + +E ++
Sbjct: 189 RERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 68/255 (26%), Positives = 91/255 (35%), Gaps = 39/255 (15%)

Query: 24  PAG-VVVKQERLSPEVAPPAHRRP-DHSGGSPSPPTSEPARSGHRGNRARGVSRS----- 76
           P G +V +  RL+    P     P D   G            GHRG R +  S S     
Sbjct: 108 PGGHIVAETPRLTEGAEPGLEYAPFDDDDGPVDCDCPASCYRGHRGYRTKHWSSSSASPP 167

Query: 77  PPKKKNKASG-------RRSKSPRSKRNRSPHHSTVK-VKQEREDHPRRG-REDRQHREP 127
           P KKK K  G       RR +S  S  + SP     K VK+ R D    G R  R+HR  
Sbjct: 168 PKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHRSR 227

Query: 128 SEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQ--------GQGRDRDTQNLQAQEEER 179
           S +  R+ +N ++ R    S  RR+     GS             R     + + ++E R
Sbjct: 228 SSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGR 287

Query: 180 EFYNARRREHR-------------QRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSF 226
           +  + R    R             QRN  GG G  S     RPG  +   + P+   P  
Sbjct: 288 KTGSQRSSGSRSPSPSGGSGWGSPQRN--GGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345

Query: 227 ELSGALLEDTNTFRG 241
               A    T   RG
Sbjct: 346 RDKAAAAAPTPPARG 360



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 54/206 (26%), Positives = 73/206 (35%), Gaps = 46/206 (22%)

Query: 3   AVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAH--------RRPDHSG---G 51
           A +  R R  RRR R       A    ++ R  P  APP          R    SG   G
Sbjct: 383 AGRRRRRRRRRRRSRSS-----ASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRG 437

Query: 52  SPSPPTSEPARSGHRGNRARGVSRSPPKKKNKAS------GRRSKSPRSKRNRSPHHSTV 105
           +P P     +  GH G+  R   R P  +    S      GRR        +RSP     
Sbjct: 438 APGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPG---- 493

Query: 106 KVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGS----GQ 161
                   HPR     R    PS+   R A        R HS  R  S ++P S    G+
Sbjct: 494 -------PHPRSWSSSRS---PSKSRSRSAEK------RPHSPSRSPSPKKPLSRDKDGE 537

Query: 162 GQGRDRDTQNLQAQEEEREFYNARRR 187
           G+ R  + +  +A+   R +   R+R
Sbjct: 538 GRARHSEAEATRARRRSRSYSPIRKR 563



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 51/199 (25%), Positives = 69/199 (34%), Gaps = 49/199 (24%)

Query: 15  RHRDGDVVLPAGVVVKQERLSPEVAPPAHRRP------DHSGGSPSPPTS------EPAR 62
           RH  G    P+      +  SP    P HR          S GS SP  S       P R
Sbjct: 254 RHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQR 313

Query: 63  SGHRGNRAR------GVSRSPPKKKNKASGR-------RSKSPRSKRNRSPHHSTVKVKQ 109
           +G  G R+       G + SPP K +  S R        + +P ++   SP   +    Q
Sbjct: 314 NGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQ 373

Query: 110 EREDHP--------RRGREDRQHREPSEQEHRRARNSDRDRH-RGHSH---QRRTSNE-- 155
            R            RR R  R+ R  +    RR R   R    RG S    + R+S++  
Sbjct: 374 GRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSG 433

Query: 156 ----------RPGSGQGQG 164
                      PGS +G G
Sbjct: 434 SGRGAPGPGPEPGSERGHG 452



 Score = 33.1 bits (74), Expect = 0.45
 Identities = 44/151 (29%), Positives = 59/151 (39%), Gaps = 28/151 (18%)

Query: 9   ERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHS--GGSPSPPTSEPARSGHR 66
           E GS R H         G   K+ +  P  A PA   P     G    P     +RS   
Sbjct: 444 EPGSERGH---------GGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGP 494

Query: 67  GNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHRE 126
             R+   SRSP K +++++ +R  SP    +RSP  S  K     +D   R R       
Sbjct: 495 HPRSWSSSRSPSKSRSRSAEKRPHSP----SRSP--SPKKPLSRDKDGEGRARH------ 542

Query: 127 PSEQEHRRARNSDRDRHRGHSHQRRTSNERP 157
            SE E  RAR     R R +S  R+   + P
Sbjct: 543 -SEAEATRARR----RSRSYSPIRKRRRDSP 568



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 31/134 (23%), Positives = 43/134 (32%), Gaps = 15/134 (11%)

Query: 2   KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPA 61
           K +  +++   R RH + +         +  R S   +P   RR D      SP   EP 
Sbjct: 528 KPLSRDKDGEGRARHSEAEAT-------RARRRSRSYSPIRKRRRD------SPSFMEPR 574

Query: 62  RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRED 121
           R      R     R  P   +        +    R+ SP HS          H  R R  
Sbjct: 575 RITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPGHSHGSYSSR--SHGTRSRTR 632

Query: 122 RQHREPSEQEHRRA 135
              R PS   H R+
Sbjct: 633 SPSRTPSPSYHSRS 646



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 27/107 (25%), Positives = 36/107 (33%), Gaps = 7/107 (6%)

Query: 35  SPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRS 94
           S   +P AH R     G  S  +  P       +R+   SRS   +K   S  RS SP+ 
Sbjct: 469 STSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKK 528

Query: 95  K-------RNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRR 134
                     R+ H      +  R          R+   PS  E RR
Sbjct: 529 PLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRR 575


>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 18/172 (10%)

Query: 64  GHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR-RGRE-- 120
           G    R R   R    +  + +  R +    +R+R       + +Q+  D  R R RE  
Sbjct: 14  GKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETE 73

Query: 121 ---DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEE 177
              +RQ     ++E +R  + +RD+ R    +R T   R  + +G GR+RD Q  + ++ 
Sbjct: 74  RETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKG-GRERDKQTERERDR 132

Query: 178 EREFYNAR------RREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEK 223
           ERE    R      +RE ++  D      E Q    R     + K+   KE+
Sbjct: 133 ERERQRQRERERQRQRERKRETD-----RERQRWAEREERKKERKKERKKER 179



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 15/191 (7%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           ++ERER  R+R R+             ER +       HR  D           +  R  
Sbjct: 16  ETERER-DRQRERENQT----------ERENRHRQRDRHRERDRQTDREKERERQKERDR 64

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSK--SPRSKRNRSPHHSTVKVKQEREDHPRRGRE-D 121
            R  R R   R   +++ +   R  K  + R +          +  + RE + + GRE D
Sbjct: 65  QR-QRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERD 123

Query: 122 RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREF 181
           +Q     ++E  R R  +R+R R    +R T  ER    + + R ++ +  + +E + + 
Sbjct: 124 KQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKK 183

Query: 182 YNARRREHRQR 192
              +RRE ++R
Sbjct: 184 KEEKRREDKKR 194



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 20/174 (11%)

Query: 58  SEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRR 117
           ++  R      R R   R     + K   R+ +  R ++         + ++ER+    R
Sbjct: 29  NQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRER 88

Query: 118 GRE-DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
            R+ DR+  +  ++E +R  + +R+R+R    +R    ER        RDR+ +  + +E
Sbjct: 89  KRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERE-------RDRERERQRQRE 141

Query: 177 EEREFYNARRRE---HRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPSFE 227
            ER+    R+RE    RQR       +E +E   R     KE++   KEK   E
Sbjct: 142 RERQRQRERKRETDRERQR------WAEREE---RKKERKKERKKERKEKKKEE 186



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 11/129 (8%)

Query: 79  KKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE-DRQHREPSEQEHRRARN 137
           +++ K    R K    +R+R         ++ R     R RE DRQ     E+E ++ R 
Sbjct: 4   QRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER- 62

Query: 138 SDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRRE---HRQRND 194
            DR R R    +R T  +R    Q + R R T   + ++ +RE    R+RE   +R+RN 
Sbjct: 63  -DRQRQRERETERETERQRERQRQRE-RKRQTDRERDKDRDRE----RKRETDRNRERNR 116

Query: 195 VGGGGSESQ 203
            GG   + Q
Sbjct: 117 KGGRERDKQ 125



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 18/74 (24%), Positives = 31/74 (41%)

Query: 121 DRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEERE 180
           +RQ     E +  +    +RDR R   +Q    N      + + RDR T   + +E ++E
Sbjct: 2   ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61

Query: 181 FYNARRREHRQRND 194
               R+RE     +
Sbjct: 62  RDRQRQRERETERE 75



 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/69 (24%), Positives = 30/69 (43%)

Query: 149 QRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPR 208
           ++R        G+   R+RD Q  +  + ERE  + +R  HR+R+       E +    R
Sbjct: 3   RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER 62

Query: 209 PGGNNKEKE 217
                +E+E
Sbjct: 63  DRQRQRERE 71


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 73/308 (23%), Positives = 120/308 (38%), Gaps = 61/308 (19%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVV----VKQERLSPEVAPPAHRRPDHSGGSPSPPTS-- 58
           + E +R  R R   G+  +         +K+ + SP V     +  DH   S SP     
Sbjct: 363 RQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSP-VRVKERKITDHRNVSESPNRKNE 421

Query: 59  -EPARSGHRGN-RARGVSRSPPK--------KKNKASGRRSKS---PRSKRNRSPH---- 101
            E     H+ N + R + R+  K        KK   S  RSKS    +SK   S H    
Sbjct: 422 KEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNE 481

Query: 102 ------------HSTVKVKQEREDHPRRGREDRQHREPSEQ------EHRRARNSDRDRH 143
                       H  VK K+++ D   + +E  + +E S+Q      EH  +++ ++DR 
Sbjct: 482 EKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRR 541

Query: 144 R------------GHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQ 191
                         HS+  RT  ER  S     R R   + + +   +E++  R +E+R+
Sbjct: 542 AQSRSRECDITKGKHSYNSRT-RERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRR 600

Query: 192 RNDVGGGGSESQELVPRPG-GNNKEKEVPAKEKPSFELSGALLEDTNTFRGVVIKYSEPP 250
           R     G S S+E    PG   +K++    ++  S E   +   + + +R    K S   
Sbjct: 601 R-----GRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRK 655

Query: 251 EARIPKKR 258
           E    +KR
Sbjct: 656 ENSESEKR 663



 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 49/247 (19%), Positives = 91/247 (36%), Gaps = 30/247 (12%)

Query: 47  DHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVK 106
           DH         S+        +R++  S+    K N+     SKS    R          
Sbjct: 493 DHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHD--HSKSKEKDRRAQSRSRECD 550

Query: 107 VKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQR------------RTSN 154
           + + +  +  R RE  + R+ S +   R+R  DRDR R   + R            R+  
Sbjct: 551 ITKGKHSYNSRTRERSRSRDRSRRV--RSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRE 608

Query: 155 ERPGSGQGQGRDRDTQNLQAQEEEREFYNARRRE----------HRQRNDVGGGGSESQE 204
            R   G+ + +DR  +   ++  ERE   +R ++          HR+ N        S+ 
Sbjct: 609 RRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKS 668

Query: 205 LVPRPGGNNKEKEVPAKEKPSFELSGALLEDTNTFRGVVIKYSEPPEAR--IPKKRWRLY 262
                  N++EK+    + P  ++  +     N  +  ++K  E  + R  + K+  +  
Sbjct: 669 RDHNSSNNSREKKADRDQSPFSKIKQS--SQDNELKSSMLKNKEDEKIRSSVEKENQKSK 726

Query: 263 PFKNDEV 269
             +ND V
Sbjct: 727 GQENDHV 733



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 15/167 (8%)

Query: 7   ERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHR 66
           E+E   R R R  +   P G    ++R        +  R +    +     ++ ++S HR
Sbjct: 595 EQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHR 654

Query: 67  GNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHP-----RRGRED 121
              +    R   K ++  S   S+  ++ R++SP     K+KQ  +D+       + +ED
Sbjct: 655 KENSESEKRMYSKSRDHNSSNNSREKKADRDQSPFS---KIKQSSQDNELKSSMLKNKED 711

Query: 122 RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRD 168
            + R   E+E+++++  + D    H H++   N++       G D D
Sbjct: 712 EKIRSSVEKENQKSKGQEND----HVHEK---NKKFDHESSPGTDED 751



 Score = 38.5 bits (88), Expect = 0.011
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 12/153 (7%)

Query: 75  RSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQER-----EDHPRRGREDRQHREPSE 129
           +SPPK   K   R+++    +R  +P +S     Q R          +GR  R++R PS 
Sbjct: 289 KSPPKADEKE--RKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSR 346

Query: 130 QEHR-RARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRR- 187
              R R R S+   H      +R    R  SG+   +   ++  + +E +R     + R 
Sbjct: 347 SRSRDRFRRSETPPH-WRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERK 405

Query: 188 --EHRQRNDVGGGGSESQELVPRPGGNNKEKEV 218
             +HR  ++     +E ++ V     N+KE+++
Sbjct: 406 ITDHRNVSESPNRKNEKEKKVKDHKSNSKERDI 438



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 42/187 (22%), Positives = 66/187 (35%), Gaps = 25/187 (13%)

Query: 57  TSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRN-RSPHHSTVKVKQ-----E 110
           T E ++   + +R         KKK K S + + S     N  +   STV+ ++     E
Sbjct: 223 TEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPE 282

Query: 111 REDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRR---TSNERPGSGQG----- 162
                R+       +E   +E  R R  +    +  S+QRR   T + R   G+G     
Sbjct: 283 NRFLMRKSPPKADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYR 342

Query: 163 -QGRDRDTQNLQAQEEEREFYNARRREHRQRNDVG-----GGGSESQELVPRPGGNNKEK 216
              R R     +  E    +    +R  R R   G     G  SE  E+       N+  
Sbjct: 343 TPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEI-----KENQRS 397

Query: 217 EVPAKEK 223
            V  KE+
Sbjct: 398 PVRVKER 404


>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
          Length = 450

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%)

Query: 49  SGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRS----KSPRSKRNR------ 98
           S  S S  TSE +      N+ + + R   +KKNK SG  +    +  +SK+ +      
Sbjct: 265 SSSSSSTETSESSSESESNNKEKKIQRKK-RKKNKCSGHNNSDSEEKDKSKKRKLHEELS 323

Query: 99  SPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPG 158
           S HH+  K K++      R  +    RE S+  H  + +  + R   HS ++R S  + G
Sbjct: 324 SSHHNREKAKEK-----PRFLKHESSREDSKWSH--SDSDKKSRTHKHSPEKRGSERKEG 376

Query: 159 SGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNN 213
           S +  GR+  ++    +   R   + ++RE R+R     G  +S+    R  G +
Sbjct: 377 SSRSHGREERSR----RSRSRSPGSYKQRETRKRAQRNPGEEQSRRNDSRSHGTD 427



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 59  EPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRG 118
           E + S H   +A+   R    + ++   + S S   K++R+  HS  K   ER++     
Sbjct: 321 ELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEG---- 376

Query: 119 REDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEE 178
              R H         R+R+    + R     R+ +   PG  Q +  D  +        E
Sbjct: 377 -SSRSHGREERSRRSRSRSPGSYKQR---ETRKRAQRNPGEEQSRRNDSRSHGTDLYRGE 432

Query: 179 REFYNARRREH 189
           + +     REH
Sbjct: 433 KMY-----REH 438


>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
          Length = 1374

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 49/187 (26%), Positives = 68/187 (36%), Gaps = 18/187 (9%)

Query: 46  PDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKS-PRSKRNRSPH--- 101
           P  S   P PP   P +  ++          PP   N      S   P +  + SPH   
Sbjct: 147 PPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRH 206

Query: 102 ---HSTVKVKQEREDHPR-RGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERP 157
              +   K   ER    R +  +D +HR+ S     R R+ DR R RG S  RR  + R 
Sbjct: 207 LPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDR-RERGRSPDRRRQDSRY 265

Query: 158 GSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRNDV---------GGGGSESQELVPR 208
            S   +GR         +  ERE    R R++R+   +           G S    +VP 
Sbjct: 266 RSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRSYGLSVVPE 325

Query: 209 PGGNNKE 215
           P G   E
Sbjct: 326 PAGCTPE 332



 Score = 36.2 bits (82), Expect = 0.053
 Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 41/127 (32%)

Query: 32  ERLSPEVAP--PAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRS 89
           ER SPE       HR  DHS G              RG R R + R            R 
Sbjct: 218 ERRSPERLKHYDDHRHRDHSHG--------------RGERHRSLDRR----------ERG 253

Query: 90  KSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQ 149
           +SP  +R  S + S             RGR   +HR      + R+R  +R+RHR   ++
Sbjct: 254 RSPDRRRQDSRYRSDYD----------RGRTPSRHRS-----YERSRERERERHRHRDNR 298

Query: 150 RRTSNER 156
           R  S ER
Sbjct: 299 RSPSLER 305


>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 1 [Homo sapiens]
          Length = 559

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 53/249 (21%), Positives = 83/249 (33%), Gaps = 28/249 (11%)

Query: 2   KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHS------------ 49
           K+   E ER   +  +D    L  G + K+E+  P  A  A + P  +            
Sbjct: 212 KSSSKELEREQAKSSKDTSRKLGEGRLPKEEKAPPPKA--AFKEPKMALKETKLESTSPK 269

Query: 50  GGSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQ 109
           GG P PP   P  S  R   A     S  K+K  +S     +P +    S   S    K 
Sbjct: 270 GGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKP 329

Query: 110 EREDHPRRGREDRQHREPSEQ----EHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGR 165
            ++    RG + +   EP E     E   + + D    +  S Q   SN    S      
Sbjct: 330 AKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDS 389

Query: 166 DRDTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVP----------RPGGNNKE 215
           D +     +Q   R      + E    +D   G   + +  P              N+ +
Sbjct: 390 DFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSAD 449

Query: 216 KEVPAKEKP 224
             +P++E P
Sbjct: 450 SSLPSREPP 458



 Score = 36.6 bits (83), Expect = 0.041
 Identities = 44/228 (19%), Positives = 79/228 (34%), Gaps = 14/228 (6%)

Query: 5   KSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSG 64
           K++   GS+  +++         V K+ R  P       R+   S  S      E A+S 
Sbjct: 174 KTKPSHGSKDANKESSKTSKPHKVTKEHRERP-------RKDSESKSSSKELEREQAKSS 226

Query: 65  HRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQH 124
              +R  G  R P ++K        K P+     +   ST          P   R   + 
Sbjct: 227 KDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASSKR 286

Query: 125 R----EPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDT---QNLQAQEE 177
                 P     ++ ++S +          RTS+    S +   +D+ +   + ++A+ E
Sbjct: 287 PATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESE 346

Query: 178 EREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKEKPS 225
            RE   A   E     D     SES +  P    ++ +    +  +PS
Sbjct: 347 PREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPS 394



 Score = 34.3 bits (77), Expect = 0.20
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 76  SPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRA 135
           S PKK   + G +  +  S +   PH  T       ++H  R R+D + +  S++  R  
Sbjct: 170 SDPKKTKPSHGSKDANKESSKTSKPHKVT-------KEHRERPRKDSESKSSSKELEREQ 222

Query: 136 RNSDRDRHRGHSHQRRTSNER 156
             S +D  R     R    E+
Sbjct: 223 AKSSKDTSRKLGEGRLPKEEK 243


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 55/226 (24%), Positives = 82/226 (36%), Gaps = 51/226 (22%)

Query: 37   EVAPPAHRRPDHSGGSPSPP-----------TSEPARSGHRGNRARGVSRS-----PPKK 80
            E+ PP+  R   S  S               T    RS  R   +R  S S     P ++
Sbjct: 985  ELRPPSRSRSTSSSRSRKKAKRKRVSREHGRTRSGTRSESRDRSSRSASPSVGEERPRRQ 1044

Query: 81   KNKASGRRSKSPRSKRNRSPHHSTVKVKQERE-----DHPRR---------GREDRQHRE 126
            ++KA  RRS S RS           K K          H RR         G    +H E
Sbjct: 1045 RSKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYEHYE 1104

Query: 127  PSEQEHRRARNSDRDRHRG----------HSHQRRTSNERPGSGQGQGRDRDTQNLQAQE 176
              +++ RR+ +  R R             H HQR  S+ERP   +     RD +  +++ 
Sbjct: 1105 SRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKESVAWPRDRRKRRSRS 1164

Query: 177  EEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEKEVPAKE 222
               E    R REHR+          S+E  P+   ++ E++   +E
Sbjct: 1165 PSSEH---RAREHRR--------PRSREKWPQTRSHSPERKGAVRE 1199



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 14/149 (9%)

Query: 56   PTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHP 115
            P + P+    +    R V   PP +    S  RS+    ++  S  H   +     E   
Sbjct: 967  PEAPPSPDVLQAATHRVVELRPPSRSRSTSSSRSRKKAKRKRVSREHGRTRSGTRSESRD 1026

Query: 116  RRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQ 175
            R  R       PS  E R  R   + + R  S  R +S ER    + + + R        
Sbjct: 1027 RSSRS----ASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSR-------- 1074

Query: 176  EEEREFYNARRREHRQRNDVGGGGSESQE 204
            E  R  +   RR  R R+  G  GS S E
Sbjct: 1075 EHRRGPWGHSRRTSRSRS--GSPGSSSYE 1101


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.131    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,842,912
Number of Sequences: 37866
Number of extensions: 1079707
Number of successful extensions: 14355
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 560
Number of HSP's that attempted gapping in prelim test: 8284
Number of HSP's gapped (non-prelim): 3844
length of query: 396
length of database: 18,247,518
effective HSP length: 104
effective length of query: 292
effective length of database: 14,309,454
effective search space: 4178360568
effective search space used: 4178360568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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