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Search of human proteins with 212549593
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
(330 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 662 0.0
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 608 e-174
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 605 e-173
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 578 e-165
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 527 e-150
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens] 147 2e-35
gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens] 143 2e-34
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens] 99 5e-21
gi|239758137 PREDICTED: hypothetical protein [Homo sapiens] 69 8e-12
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 63 3e-10
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 63 3e-10
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 50 2e-06
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 50 2e-06
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 50 3e-06
gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens] 46 5e-05
gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens] 46 5e-05
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 38 0.011
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 38 0.011
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 38 0.014
gi|13376109 hypothetical protein LOC79823 [Homo sapiens] 36 0.054
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 33 0.27
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 33 0.46
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 33 0.46
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 33 0.46
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 32 0.60
gi|23397642 GREB1 protein isoform a [Homo sapiens] 30 2.3
gi|188035871 SET and MYND domain containing 2 [Homo sapiens] 30 3.9
gi|46255049 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens] 30 3.9
gi|46255047 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens] 30 3.9
gi|227908867 protein arginine methyltransferase 6 [Homo sapiens] 29 5.1
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 662 bits (1709), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
Query: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ
Sbjct: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD
Sbjct: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
Query: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL
Sbjct: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 608 bits (1568), Expect = e-174
Identities = 304/330 (92%), Positives = 313/330 (94%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAGTELLLQ FERRFLA RTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
VKHPPSVKYA CFLSELIKKHEAVHTEPLD+LYE LAETLMAKESTQGHRSYLL SGGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
Query: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
TLS+STAIIS+GTTGLVTWDAALYLAEWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
PRAYIFSD HSR+LEQLRGNVLLNGLSLEADIT LDSPRVTVAQLDWDVA VHQLSAFQ
Sbjct: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELGR
Sbjct: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
Query: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 605 bits (1559), Expect = e-173
Identities = 304/330 (92%), Positives = 311/330 (94%), Gaps = 1/330 (0%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
M PEENAGT+LLLQ FE RFL RTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC
Sbjct: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
VK PPSVKYA CFLSELIKKHEAVHTEPLD+LYE LAETLMAKESTQGH+SYLL GGSV
Sbjct: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
Query: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
T S+STAIISHGTTG VTWD ALYL EWAIENPAAFINRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
PRAYIFSDPHSR+LEQL+GNVLLNGLSLEADITGN SPRVTVAQLDWDVA VHQLSAF
Sbjct: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGN-XSPRVTVAQLDWDVATVHQLSAFH 239
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELG+
Sbjct: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
Query: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL
Sbjct: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 578 bits (1489), Expect = e-165
Identities = 295/330 (89%), Positives = 296/330 (89%), Gaps = 34/330 (10%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
VKHPPSVKYAWCFLSELIKK SSGGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKK----------------------------------SSGGSV 86
Query: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR
Sbjct: 87 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 146
Query: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
PRAYIFSDPHSR+LEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ
Sbjct: 147 PRAYIFSDPHSRVLEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 206
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD
Sbjct: 207 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 266
Query: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL
Sbjct: 267 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 296
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 527 bits (1357), Expect = e-150
Identities = 272/330 (82%), Positives = 280/330 (84%), Gaps = 34/330 (10%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAGTELLLQ FERRFLA RTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
VKHPPSVKYA CFLSELIKK SGGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKK----------------------------------PSGGSV 86
Query: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
TLS+STAIIS+GTTGLVTWDAALYLAEWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 87 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 146
Query: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
PRAYIFSD HSR+LEQLRGNVLLNGLSLEADIT LDSPRVTVAQLDWDVA VHQLSAFQ
Sbjct: 147 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 206
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELGR
Sbjct: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
Query: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 267 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo
sapiens]
Length = 158
Score = 147 bits (370), Expect = 2e-35
Identities = 73/88 (82%), Positives = 78/88 (88%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAG+ELLLQ F+RRFLA R LRSF WQSLEAKLRDSSDSELLRDILQKTV+HPVC
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTVKHPVC 60
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEP 88
VKHPPSVKYA CFLSELIKK + +P
Sbjct: 61 VKHPPSVKYARCFLSELIKKTCCIAQKP 88
>gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens]
Length = 165
Score = 143 bits (360), Expect = 2e-34
Identities = 79/115 (68%), Positives = 83/115 (72%), Gaps = 27/115 (23%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAG+ELLLQ F+RRFLA R LRSF WQSLEAKLRDSSDSELLRDILQ
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQ-------- 52
Query: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLS 115
KHEAVHTEPLD+LYEVL ETLMAKESTQGHRSYLL+
Sbjct: 53 -------------------KHEAVHTEPLDELYEVLVETLMAKESTQGHRSYLLT 88
>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo
sapiens]
Length = 131
Score = 99.0 bits (245), Expect = 5e-21
Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
MAPEENAG+ELLLQ F+RRFLA R LRSF WQSLEAKLRDSSDSELLRDILQKT C
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
Query: 61 VKHPPSVKYA 70
+ PS +++
Sbjct: 57 IAQKPSCRWS 66
>gi|239758137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 89
Score = 68.6 bits (166), Expect = 8e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 32
MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ
Sbjct: 25 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 56
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 63.2 bits (152), Expect = 3e-10
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 32
MAPEENAGTEL LQGFERRFLA R+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 63.2 bits (152), Expect = 3e-10
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 32
MAPEENAGTEL LQGFERRFLA R+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 50.4 bits (119), Expect = 2e-06
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 131 HGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPH 190
H V WDAA+ L+ + R+ +ELG+G GL G+ + A++
Sbjct: 39 HLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDR 95
Query: 191 SRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQP---DVVIAA 247
LE L+ NV +A++ ++ + + V +L W L +F P D+++ A
Sbjct: 96 KVALEFLKSNV-------QANLPPHIQT-KTVVKELTWG----QNLGSFSPGEFDLILGA 143
Query: 248 DVLYCPEAIVSLVGVLQRLAACREH 272
D++Y E L+ L+ L C H
Sbjct: 144 DIIYLEETFTDLLQTLEHL--CSNH 166
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 50.4 bits (119), Expect = 2e-06
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 131 HGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPH 190
H V WDAA+ L+ + R+ +ELG+G GL G+ + A++
Sbjct: 39 HLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDR 95
Query: 191 SRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQP---DVVIAA 247
LE L+ NV +A++ ++ + + V +L W L +F P D+++ A
Sbjct: 96 KVALEFLKSNV-------QANLPPHIQT-KTVVKELTWG----QNLGSFSPGEFDLILGA 143
Query: 248 DVLYCPEAIVSLVGVLQRLAACREH 272
D++Y E L+ L+ L C H
Sbjct: 144 DIIYLEETFTDLLQTLEHL--CSNH 166
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 50.1 bits (118), Expect = 3e-06
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 139 WDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILEQLR 198
WDAAL L + F + V+ELG+G G+ G+ + + I P + LEQ++
Sbjct: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI-LAALQGGDVTITDLPLA--LEQIQ 113
Query: 199 GNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQPDVVIAADVLYCPEAIVS 258
GNV N + + V L W + H + D+V+ AD++Y
Sbjct: 114 GNVQANVPA----------GGQAQVRALSWGID--HHVFPANYDLVLGADIVYLEPTFPL 161
Query: 259 LVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTEL 297
L+G LQ L CR H +Y+A +R + F L
Sbjct: 162 LLGTLQHL--CRPH---GTIYLASKMRKEHGTESFFQHL 195
>gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens]
Length = 194
Score = 45.8 bits (107), Expect = 5e-05
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 26/147 (17%)
Query: 130 SHGTTGLVTWDAALYLAEWAIENPA-------AFINRTVLELGSGAGLTGLAICKMCRPR 182
S G G V WDAA+ L+++ +E P A R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 183 AYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAF--Q 240
A + +D LE+L+ + L + ++ +L + V L W ++ F
Sbjct: 86 ATLGADVVVTDLEELQ-----DLLKMNINMNKHLVTGSVQAKVLKWG----EEIEGFPSP 136
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLA 267
PD ++ AD +Y E++ L+ L+ ++
Sbjct: 137 PDFILMADCIYYEESLEPLLKTLKDIS 163
>gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens]
Length = 229
Score = 45.8 bits (107), Expect = 5e-05
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 26/147 (17%)
Query: 130 SHGTTGLVTWDAALYLAEWAIENPA-------AFINRTVLELGSGAGLTGLAICKMCRPR 182
S G G V WDAA+ L+++ +E P A R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 183 AYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAF--Q 240
A + +D LE+L+ + L + ++ +L + V L W ++ F
Sbjct: 86 ATLGADVVVTDLEELQ-----DLLKMNINMNKHLVTGSVQAKVLKWG----EEIEGFPSP 136
Query: 241 PDVVIAADVLYCPEAIVSLVGVLQRLA 267
PD ++ AD +Y E++ L+ L+ ++
Sbjct: 137 PDFILMADCIYYEESLEPLLKTLKDIS 163
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 38.1 bits (87), Expect = 0.011
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 12/128 (9%)
Query: 136 LVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILE 195
+ W A+ LA++ + + + +LE+G+G L G+ K S LE
Sbjct: 1 MYVWPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAKCGAEVILSDSSELPHCLE 60
Query: 196 QLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQPDVVIAADVLYCPEA 255
R + +N L P + V L W L+ D+++A+DV + PE
Sbjct: 61 VCRQSCQMNNL------------PHLQVVGLTWGHISWDLLALPPQDIILASDVFFEPED 108
Query: 256 IVSLVGVL 263
++ +
Sbjct: 109 FEDILATI 116
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 135 GLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRIL 194
G W AL LA++ + F T LELG+G GL + M R +D + +L
Sbjct: 183 GKQVWRGALLLADYILFRQDLFRGCTALELGAGTGLASIIAATMA--RTVYCTDVGADLL 240
Query: 195 EQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDW 228
+ N+ LN S A G + V V +LDW
Sbjct: 241 SMCQRNIALN--SHLAATGGGI----VRVKELDW 268
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 37.7 bits (86), Expect = 0.014
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 135 GLVTWDAALYLAEWAIENPAA--FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSR 192
G V W A+ L ++ E+ F + +LE+G+G GL + + A + +
Sbjct: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASIL---GAQVTATDLPD 144
Query: 193 ILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDW--DVAMVHQLSAFQPDVVIAADVL 250
+L L+ N+L N L A + V +L W D+ SAF D V+A+DV+
Sbjct: 145 VLGNLQYNLLKNTLQCTAHLP--------EVKELVWGEDLDKNFPKSAFYYDYVLASDVV 196
Query: 251 Y 251
Y
Sbjct: 197 Y 197
>gi|13376109 hypothetical protein LOC79823 [Homo sapiens]
Length = 323
Score = 35.8 bits (81), Expect = 0.054
Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Query: 119 SVTLSKSTAIISHGTTGLVT-WDAALYLAEWAIENPAAFINRTVLELGSGAG-LTGLAIC 176
S +L+ + S TG V W + LA + +++ F V ELG G L GL +
Sbjct: 107 SGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVA 166
Query: 177 KMCRPRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAM-VHQ 235
+ + +D + + + ++ + N + G + +++ L WD V Q
Sbjct: 167 ISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKTQKISSCVLRWDNETDVSQ 220
Query: 236 LSAFQPDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTT 295
L D+V+ AD L+ + SLV ++RL R + F R T F
Sbjct: 221 LEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA------MVFAPRRGNTLNQFCN 273
Query: 296 ELGRDGIRWEAEAHHDQKLFPYGEHLE 322
+ G + ++D+ + + L+
Sbjct: 274 LAEKAGFCIQRHENYDEHISNFHSKLK 300
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 33.5 bits (75), Expect = 0.27
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 96 LAETLMAKESTQGHRSYLLSSGGSVTLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAA 155
+ +T++ KE+ G ++S S S S I GL W+ L + +
Sbjct: 131 VVKTILLKENFPGEN--IVSKSFS---SHSDLITGVYEGGLKIWECTFDLLAYFTKAKVK 185
Query: 156 FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILEQLR-GNVLLN 204
F + VL+LG G+GL G+ K + F D +S +++++ NV+ N
Sbjct: 186 FAGKKVLDLGCGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 32.7 bits (73), Expect = 0.46
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 137 VTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLA 174
+ W L+ + ++NP ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 32.7 bits (73), Expect = 0.46
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 137 VTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLA 174
+ W L+ + ++NP ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 32.7 bits (73), Expect = 0.46
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 137 VTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLA 174
+ W L+ + ++NP ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 32.3 bits (72), Expect = 0.60
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 139 WDAALYLAEWAIENPAAFINRTVLELGSGAGLTGL 173
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
>gi|23397642 GREB1 protein isoform a [Homo sapiens]
Length = 1949
Score = 30.4 bits (67), Expect = 2.3
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 260 VGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELG-RDGIRWEAEA-------HHD 311
VG++ RL CRE K AP + P Q T + + I W A H +
Sbjct: 792 VGLVDRLLNCREVKEAPNIVTLHVTSFPYALQTQHTLISPYNEIHWPASCSNGVDLYHEN 851
Query: 312 QKLFPYGEHLEMAM 325
+K F E +E +
Sbjct: 852 KKYFGLSEFIESTL 865
>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 3.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 229 DVAMVHQLSAFQPDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAF 282
D + H SA PDV + CP IV+ G L + A +E K EV+ ++
Sbjct: 188 DEELSHLGSAIFPDVALMNHSC-CPNVIVTYKGTLAEVRAVQEIKPGEEVFTSY 240
>gi|46255049 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 3.9
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 150 IENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILEQLRGNVLLNGLS 207
++N + ++ +L++G G G+ L RPRA +++ S + + VL NG +
Sbjct: 130 LQNKESLTDKVILDVGCGTGIISLFCAHYARPRA-VYAVEASEMAQHTGQLVLQNGFA 186
>gi|46255047 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 3.9
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 150 IENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILEQLRGNVLLNGLS 207
++N + ++ +L++G G G+ L RPRA +++ S + + VL NG +
Sbjct: 130 LQNKESLTDKVILDVGCGTGIISLFCAHYARPRA-VYAVEASEMAQHTGQLVLQNGFA 186
>gi|227908867 protein arginine methyltransferase 6 [Homo sapiens]
Length = 375
Score = 29.3 bits (64), Expect = 5.1
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 150 IENPAAFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILEQLRGNVLLNGL 206
+ N AA +TVL++G+G G+ + C R +++ S I +Q R V NGL
Sbjct: 75 LRNWAALRGKTVLDVGAGTGILSI-FCAQAGARR-VYAVEASAIWQQAREVVRFNGL 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,227,604
Number of Sequences: 37866
Number of extensions: 498168
Number of successful extensions: 1152
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1120
Number of HSP's gapped (non-prelim): 39
length of query: 330
length of database: 18,247,518
effective HSP length: 103
effective length of query: 227
effective length of database: 14,347,320
effective search space: 3256841640
effective search space used: 3256841640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.