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Search of human proteins with 209862871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209862871 tRNA methyltransferase 1 isoform 1 [Homo sapiens]
(659 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8923219 tRNA methyltransferase 1 isoform 1 [Homo sapiens] 1329 0.0
gi|209862871 tRNA methyltransferase 1 isoform 1 [Homo sapiens] 1329 0.0
gi|216548445 tRNA methyltransferase 1 isoform 2 [Homo sapiens] 1254 0.0
gi|163792194 N2,N2-dimethylguanosine tRNA methyltransferase-like... 78 3e-14
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 36 0.099
gi|123701326 zinc finger protein 831 [Homo sapiens] 36 0.099
gi|22035598 mitogen-activated protein kinase kinase kinase 8 [Ho... 35 0.17
gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens] 35 0.22
gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens] 35 0.22
gi|224591430 Ly1 antibody reactive homolog [Homo sapiens] 33 0.64
gi|8923398 Ly1 antibody reactive homolog [Homo sapiens] 33 0.64
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 33 0.64
gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens] 33 0.64
gi|5032243 makorin ring finger protein 3 [Homo sapiens] 32 1.4
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 32 1.4
gi|118150660 erythropoietin 4 immediate early response [Homo sap... 32 1.4
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 32 1.9
gi|110832843 TBP-associated factor 4 [Homo sapiens] 32 1.9
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 32 1.9
gi|158534059 formin binding protein 4 [Homo sapiens] 32 1.9
gi|40556370 PHD finger protein 15 [Homo sapiens] 32 1.9
gi|239755873 PREDICTED: hypothetical protein [Homo sapiens] 32 2.4
gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 32 2.4
gi|188536004 zinc finger protein 469 [Homo sapiens] 32 2.4
gi|156616294 peptidoglycan recognition protein 2 precursor [Homo... 32 2.4
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 32 2.4
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 32 2.4
gi|157785645 SPEG complex locus [Homo sapiens] 32 2.4
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 32 2.4
gi|32880199 makorin ring finger protein 2 [Homo sapiens] 32 2.4
>gi|8923219 tRNA methyltransferase 1 isoform 1 [Homo sapiens]
Length = 659
Score = 1329 bits (3439), Expect = 0.0
Identities = 659/659 (100%), Positives = 659/659 (100%)
Query: 1 MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG 60
MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG
Sbjct: 1 MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG 60
Query: 61 AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS 120
AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS
Sbjct: 61 AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS 120
Query: 121 EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV 180
EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV
Sbjct: 121 EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV 180
Query: 181 VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT 240
VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT
Sbjct: 181 VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT 240
Query: 241 FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD 300
FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD
Sbjct: 241 FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD 300
Query: 301 LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG 360
LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG
Sbjct: 301 LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG 360
Query: 361 KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG 420
KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG
Sbjct: 361 KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG 420
Query: 421 RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH 480
RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH
Sbjct: 421 RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH 480
Query: 481 ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN 540
ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN
Sbjct: 481 ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN 540
Query: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR
Sbjct: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
Query: 601 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID
Sbjct: 601 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
>gi|209862871 tRNA methyltransferase 1 isoform 1 [Homo sapiens]
Length = 659
Score = 1329 bits (3439), Expect = 0.0
Identities = 659/659 (100%), Positives = 659/659 (100%)
Query: 1 MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG 60
MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG
Sbjct: 1 MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG 60
Query: 61 AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS 120
AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS
Sbjct: 61 AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS 120
Query: 121 EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV 180
EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV
Sbjct: 121 EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV 180
Query: 181 VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT 240
VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT
Sbjct: 181 VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT 240
Query: 241 FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD 300
FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD
Sbjct: 241 FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD 300
Query: 301 LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG 360
LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG
Sbjct: 301 LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG 360
Query: 361 KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG 420
KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG
Sbjct: 361 KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG 420
Query: 421 RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH 480
RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH
Sbjct: 421 RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH 480
Query: 481 ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN 540
ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN
Sbjct: 481 ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN 540
Query: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR
Sbjct: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
Query: 601 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID
Sbjct: 601 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
>gi|216548445 tRNA methyltransferase 1 isoform 2 [Homo sapiens]
Length = 630
Score = 1254 bits (3246), Expect = 0.0
Identities = 630/659 (95%), Positives = 630/659 (95%), Gaps = 29/659 (4%)
Query: 1 MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG 60
MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG
Sbjct: 1 MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYGEERPREVQETTVTEG 60
Query: 61 AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS 120
AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS
Sbjct: 61 AAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKVVVDLS 120
Query: 121 EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV 180
EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV
Sbjct: 121 EQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALEVPGLRSV 180
Query: 181 VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT 240
VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT
Sbjct: 181 VANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPAT 240
Query: 241 FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD 300
FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD
Sbjct: 241 FLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLD 300
Query: 301 LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLG 360
LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASA
Sbjct: 301 LRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASA--------------------- 339
Query: 361 KASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG 420
RAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG
Sbjct: 340 --------RAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPG 391
Query: 421 RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH 480
RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH
Sbjct: 392 RFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSH 451
Query: 481 ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN 540
ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN
Sbjct: 452 ACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDAN 511
Query: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR
Sbjct: 512 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 571
Query: 601 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID
Sbjct: 572 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 630
>gi|163792194 N2,N2-dimethylguanosine tRNA methyltransferase-like
[Homo sapiens]
Length = 733
Score = 77.8 bits (190), Expect = 3e-14
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 34/281 (12%)
Query: 154 LHVLEGLAASGLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQPSQA-- 211
L L+ A+G+ +++A + V ND + +V LI+ N LN + +V +
Sbjct: 277 LECLDAFGATGIMGLQWAKHLGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEK 336
Query: 212 --------------------DARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSE 251
DA +LM+ FD I LDP+G+ +LD+A + +
Sbjct: 337 SDDILEEGEKNLGNIKVTKMDANVLMHLRS-----FDFIHLDPFGTSVNYLDSAFRNIRN 391
Query: 252 GGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVV 311
G++ VT TD++ L + YG +++ E+A RIV+ ++ A + +
Sbjct: 392 LGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIE 451
Query: 312 PLLSISADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAK 371
L +++ + +V V VRV G +A K + C C Q+ G R
Sbjct: 452 VLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYRQL 511
Query: 372 FSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVL 412
P G+ GP+W+ + + F+ R+L
Sbjct: 512 -------PCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRML 545
Score = 30.8 bits (68), Expect = 4.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 443 PLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAP 491
P YY + + S N P L + L A FRVS +H V+TDAP
Sbjct: 633 PFYYNIHR-HSIKGMNMPKLKKFLCYLSQAGFRVSRTHFDPMGVRTDAP 680
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 36.2 bits (82), Expect = 0.099
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 100 KGIQIKVPGEKDTQK--VVVDLSEQEEEKVEL--KESENLASGDQPRTAAVGE--ICEEG 153
K + +K E K V DL EQ+EE V KE E+ A GDQ R+ +GE + E+
Sbjct: 387 KNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQT 446
Query: 154 LHVL 157
H++
Sbjct: 447 NHII 450
>gi|123701326 zinc finger protein 831 [Homo sapiens]
Length = 1677
Score = 36.2 bits (82), Expect = 0.099
Identities = 48/174 (27%), Positives = 59/174 (33%), Gaps = 32/174 (18%)
Query: 503 EKECPVKRERLSET--SPAFRILSVEPRLQANFTIREDANPSSRQRGLKRFQANPEANWG 560
E C E SE SP + P L N +R +A P R EA W
Sbjct: 231 ESRCQGMHEGASERPLSPGAHV----PLLAKNLDVRTEAAPCPGSAFADR-----EAPWD 281
Query: 561 PRPRARPGGKAADEAMEERRRLLQNKRK----------------EPPEDVAQRAARLKTF 604
P A PG AA + + R+L + K E P D RL+
Sbjct: 282 SAPMASPGLPAA--STQPWRKLPEQKSPTAGKPCALQRQQATAAEKPWDAKAPEGRLRK- 338
Query: 605 PCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPG-AAAGPG 657
C+ G R D H+P +P S E PGPG A A PG
Sbjct: 339 -CESTDSGYLSRSDSAEQPHAPCSPLHSLSEHSAESEGEGGPGPGPGVAGAEPG 391
>gi|22035598 mitogen-activated protein kinase kinase kinase 8 [Homo
sapiens]
Length = 467
Score = 35.4 bits (80), Expect = 0.17
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 491 PASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDANPSSRQRG--- 547
P SA + K+ P + + SP R L +E L+ N P+ R R
Sbjct: 332 PRSAYPSYLYIIHKQAPPLEDIADDCSPGMREL-IEASLERN--------PNHRPRAADL 382
Query: 548 LKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVA 595
LK NP PR +P ++ D A+ ER+RLL K E PE++A
Sbjct: 383 LKHEALNP-----PR-EDQPRCQSLDSALLERKRLLSRKELELPENIA 424
>gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens]
Length = 329
Score = 35.0 bits (79), Expect = 0.22
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 606 CKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
CK F+ G C GD+C Y HS P + A A ++S + GP ++
Sbjct: 90 CKYFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSSLAASSSLSSIVGPLVE 143
Score = 31.2 bits (69), Expect = 3.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 602 KTFPCKRFKEGTCQRGDQCCYSH 624
K C+ F G C+ GD C YSH
Sbjct: 57 KQVTCRYFMHGVCKEGDNCRYSH 79
>gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens]
Length = 482
Score = 35.0 bits (79), Expect = 0.22
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 606 CKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGID 659
CK F+ G C GD+C Y HS P + A A ++S + GP ++
Sbjct: 90 CKYFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSSLAASSSLSSIVGPLVE 143
Score = 31.2 bits (69), Expect = 3.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 602 KTFPCKRFKEGTCQRGDQCCYSH 624
K C+ F G C+ GD C YSH
Sbjct: 57 KQVTCRYFMHGVCKEGDNCRYSH 79
>gi|224591430 Ly1 antibody reactive homolog [Homo sapiens]
Length = 379
Score = 33.5 bits (75), Expect = 0.64
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 486 VKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDANPSSRQ 545
+ T PAS + D + + KRER E + E +L+ + + P R+
Sbjct: 165 ISTKVPASKVKDAVEQQGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRK 224
Query: 546 RGLKRF-----QANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
+G + + PEAN R++ + D A EE R+ KRK +V + +
Sbjct: 225 KGQEADLEAGGEEVPEANGSAGKRSKKKKQRKDSASEEEARVGAGKRKRRHSEVETDSKK 284
Query: 601 LK 602
K
Sbjct: 285 KK 286
>gi|8923398 Ly1 antibody reactive homolog [Homo sapiens]
Length = 379
Score = 33.5 bits (75), Expect = 0.64
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 486 VKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDANPSSRQ 545
+ T PAS + D + + KRER E + E +L+ + + P R+
Sbjct: 165 ISTKVPASKVKDAVEQQGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRK 224
Query: 546 RGLKRF-----QANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
+G + + PEAN R++ + D A EE R+ KRK +V + +
Sbjct: 225 KGQEADLEAGGEEVPEANGSAGKRSKKKKQRKDSASEEEARVGAGKRKRRHSEVETDSKK 284
Query: 601 LK 602
K
Sbjct: 285 KK 286
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 33.5 bits (75), Expect = 0.64
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 521 RILSVEPRLQANFTIREDANPSSRQRGLKRF---QANPEANWGPRPRARPGGKAADEAME 577
R +S E R + + T R D +PS R+R L+R + +PE G P R A
Sbjct: 1347 RDVSPERRRERSPTRRRDGSPSRRRRSLERLLEQRRSPERRRGGSPERRAKSTDRRRARS 1406
Query: 578 ERRRLLQNKRKEPPEDVAQRAAR 600
RR ++ K ED A R
Sbjct: 1407 PERRRERSLDKRNREDRASHRER 1429
>gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]
Length = 291
Score = 33.5 bits (75), Expect = 0.64
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 604 FPCKRFKEGT-CQRGDQCCYSHSPPTP 629
+PCK + GT C +G+ C +SH+P TP
Sbjct: 247 YPCKFYHTGTKCYQGEYCKFSHAPLTP 273
>gi|5032243 makorin ring finger protein 3 [Homo sapiens]
Length = 507
Score = 32.3 bits (72), Expect = 1.4
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 602 KTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGP 656
K C+ + G C+ G+ C YSH +++ + +PPG A GP
Sbjct: 97 KQIICRYYIHGQCKEGENCRYSHDLSGRKMATE--------GGVSPPGASAGGGP 143
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 26/83 (31%)
Query: 574 EAMEERRRLLQNKRKEPPEDVAQRAARLKTFPCKRFKEG--TCQRGDQCCYSHSPPTPRV 631
E EE+++L+Q + E ++ +A C+ F EG C GD C Y H
Sbjct: 379 EEEEEKQKLIQQYK----EAMSNKA-------CRYFAEGRGNCPFGDTCFYKH------- 420
Query: 632 SADAAPDCPETSNQTPPGPGAAA 654
+ PE PPGPG +
Sbjct: 421 ------EYPEGWGDEPPGPGGGS 437
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 32.3 bits (72), Expect = 1.4
Identities = 39/143 (27%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Query: 4 SSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGP----YGEERPREVQETTVTE 59
SS WL T A+ L AR SP LP + + T P P + E E
Sbjct: 452 SSSWLEGTSTQAKELRLARITPTPSPKLPEPSVLSEVTKPPPCLENSSPPSRIPE---PE 508
Query: 60 GAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIKVPGEKDTQKV-VVD 118
AK P+A+ ++ R V E + Q A+ ++ + TQ V + D
Sbjct: 509 SPAKPNVPTASTAPPADSRDRRRSYQMPVRDEESESQRKARS-RLMRQSRRSTQGVTLTD 567
Query: 119 LSEQEEEKVELKESENLASGDQP 141
L E E+ + ESE A P
Sbjct: 568 LKEAEKAAGKAPESEKPAQSLDP 590
>gi|118150660 erythropoietin 4 immediate early response [Homo
sapiens]
Length = 426
Score = 32.3 bits (72), Expect = 1.4
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 561 PRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR---LKTFPCKRFKEGTCQRG 617
PR A+ + + ++++ L + P AQ+ ++ K+ C FK+G C +G
Sbjct: 57 PRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKG 116
Query: 618 DQCCYSH 624
D+C +SH
Sbjct: 117 DKCKFSH 123
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 32.0 bits (71), Expect = 1.9
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Query: 560 GPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAARLKTFPCKRFKE------GT 613
G RP++ K +E EE ++ + K KE E+VA+ A + KE
Sbjct: 394 GTRPQSTSDQKLWEEVGEEAKKEAEEKAKEEAEEVAEEEAEKEPQDWAETKEEPEAEAEA 453
Query: 614 CQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPP 648
G H P +V A CP + + PP
Sbjct: 454 ASSGVPATKQH--PEVQVEDTDADSCPLMAEENPP 486
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 32.0 bits (71), Expect = 1.9
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 561 PRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQC 620
P RARPGG +R +R P A AA+L+ P G+C
Sbjct: 91 PAGRARPGGGGP-----QRPGPPSPRRPLVPAGPAPPAAKLR--PPPEGSAGSCAPVPAA 143
Query: 621 CYSHSPPTPRVSADAAPDCPET-SNQTPPGPGAAAGPG 657
+ P P + A P P + + PGPG GPG
Sbjct: 144 AAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG 181
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 32.0 bits (71), Expect = 1.9
Identities = 38/149 (25%), Positives = 51/149 (34%), Gaps = 14/149 (9%)
Query: 515 ETSPAFRILSVEPRLQANFTIREDANPSSRQRGLKRFQANPEANWGPRPRARPGGKAADE 574
E +PA + PR P R GL+ P A P R+ A D
Sbjct: 1131 EDTPASEPAAALPRKSGRAAATRSRIP--RPIGLR--MPMPVAAQQPASRSHGAAPALDT 1186
Query: 575 AMEERRRLLQNKRKEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVS-- 632
A+ R +L + PP R K P + G Q G + SP P +
Sbjct: 1187 AITSRLQL-----QTPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSA 1241
Query: 633 ---ADAAPDCPETSNQTPPGPGAAAGPGI 658
A A+P S + P P A PG+
Sbjct: 1242 ARNASASPRSQSLSRRESPSPSHQARPGV 1270
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 32.0 bits (71), Expect = 1.9
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 46 EERPREVQETTVT-EGAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQI 104
EE EV+ET+ T E A I P E+ + +++ +++ C+V+ Q G +
Sbjct: 349 EEPVSEVKETSTTVEEATTIVKPQ--EIMLDNIEDPSQEDLCSVV------QSG----ES 396
Query: 105 KVPGEKDTQKVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVL 157
+ E+DT ++ + L ++ E L+E + SG PR+ ++G+ L
Sbjct: 397 EEEEEQDTLELELVLERKKAELRALEEGDGSVSGSSPRSDISQPASQDGMRRL 449
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 32.0 bits (71), Expect = 1.9
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 13/103 (12%)
Query: 563 PRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQCCY 622
P RPG D A + R R +K+PP Q +T P K K+ Q
Sbjct: 583 PSLRPG----DPARKARGRTRLPAKKKPPPPPPQDGPGSRTTPDKAPKKTWGQDAGSGKG 638
Query: 623 SHSPPT---PR------VSADAAPDCPETSNQTPPGPGAAAGP 656
PPT PR S+ AA DCP + P P A P
Sbjct: 639 GQGPPTRKPPRRTSSHLPSSPAAGDCPILATPESPPPLAPETP 681
>gi|239755873 PREDICTED: hypothetical protein [Homo sapiens]
Length = 577
Score = 31.6 bits (70), Expect = 2.4
Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 18/127 (14%)
Query: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
P+ RG R + PEA P R + + A E ++ Q +P
Sbjct: 289 PAGALRGRPRRKRYPEAGRVPGARVQEPQRGAGEQKDQSA---QGPAAQPHPRPG--ILM 343
Query: 601 LKTFPCKRFKEGTCQRGDQC------------CYSHSPPTPRVSADAAPDCPETSNQTPP 648
LKTF C+ F +R + +PPTP+ + P C S + P
Sbjct: 344 LKTFGCRGFDAAVRKRKSPALSGQWQSPSPPPALAGAPPTPQQRQNFGPGCAGLSPR-PE 402
Query: 649 GPGAAAG 655
GP A G
Sbjct: 403 GPHGAGG 409
>gi|239742580 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 897
Score = 31.6 bits (70), Expect = 2.4
Identities = 51/212 (24%), Positives = 76/212 (35%), Gaps = 19/212 (8%)
Query: 452 SSTIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRE 511
SS+ H +T L +L+ A L+H+ N V D P A+ RC K +
Sbjct: 667 SSSSHSSTEGLQELKRRRGPASSHCQLAHSSSNTVSEDGP-QAVSSGHRCENKAGTAPGQ 725
Query: 512 RLSETSPAFRILSVEPRLQANFTIRE----DANPSSRQRGLKRFQANPEANWGPRPRARP 567
L+ R + PR+ + + + D PS L A+ GP P
Sbjct: 726 TLAPRGGYPRSQASRPRINSALHVEDKAISDCRPSRPSHTLSSLATG--ASGGP-----P 778
Query: 568 GGKAAD-EAMEERRRLLQNKRKEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQCCYSHSP 626
KA +A ++R + P +A A T P G R +S S
Sbjct: 779 VSKAPTMDAQQDRPKSQDCLGLLAP--LASAAEVSSTAPV----SGKKHRPPGPLFSSSD 832
Query: 627 PTPRVSADAAPDCPETSNQTPPGPGAAAGPGI 658
P P S+ + +TS P A+ GI
Sbjct: 833 PLPATSSHSGDSAQDTSLIPAPFTPASRDAGI 864
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 31.6 bits (70), Expect = 2.4
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVAQRAAR 600
P ++ R + + P + G P + PG + + + R P + ++ A R
Sbjct: 61 PEAQPRQARDGELKPPSLRGQAPSSTPGKRGSPQTPPGR---------SPLQAPSRLAGR 111
Query: 601 LKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAAAGPGI 658
+ P +R+ G + +P P++ A PE PG GA PG+
Sbjct: 112 AEGSPPQRYILGIASSRTKPTLDETPENPQLEA---AQLPEVDTPQGPGTGAPLRPGL 166
>gi|156616294 peptidoglycan recognition protein 2 precursor [Homo
sapiens]
Length = 576
Score = 31.6 bits (70), Expect = 2.4
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 454 TIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCW 502
T+ PS +R+ LL D+ + L H + V+TD P AL+D++R W
Sbjct: 498 TVRDTLPSCA-VRAGLLRPDYAL-LGH--RQLVRTDCPGDALFDLLRTW 542
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 31.6 bits (70), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 632 SADAAPDCPETSNQTPPGPGAAAGPG 657
S+D+APDC + ++ PGPG G G
Sbjct: 23 SSDSAPDCWDQADMEAPGPGPCGGGG 48
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 31.6 bits (70), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 632 SADAAPDCPETSNQTPPGPGAAAGPG 657
S+D+APDC + ++ PGPG G G
Sbjct: 23 SSDSAPDCWDQADMEAPGPGPCGGGG 48
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 31.6 bits (70), Expect = 2.4
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 34/144 (23%)
Query: 541 PSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNK---------RKEPP 591
P + R L++ ++ A WG P A A ++ ERRRL Q K ++ P
Sbjct: 429 PLRKARSLEQPKSERGAPWGT-PGASQEELRAPGSVAERRRLFQQKAASLDERTRQRSPA 487
Query: 592 EDVAQRAARLKTFPCKRFKEGTCQRGDQCCYSHS--------PPTPRVSAD----AAPDC 639
D+ R A+ R + T + ++ SH P+PR + + P
Sbjct: 488 SDLELRFAQ----ELGRIRRSTSR--EELVRSHESLRATLQRAPSPREPGEPPLFSRPST 541
Query: 640 PETSNQT------PPGPGAAAGPG 657
P+TS PP P +A PG
Sbjct: 542 PKTSRAVSPAAAQPPSPSSAEKPG 565
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 31.6 bits (70), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 604 FPCKRFKE-GTCQRGDQCCYSHSPPT 628
FPCK + G C GD C +SH P T
Sbjct: 446 FPCKLYHTTGNCINGDDCMFSHDPLT 471
Score = 30.8 bits (68), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 606 CKRFKEGTCQRGDQCCYSHSPPTPR 630
CK F EG C GD C +SH P+
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPK 420
>gi|32880199 makorin ring finger protein 2 [Homo sapiens]
Length = 416
Score = 31.6 bits (70), Expect = 2.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 584 QNKRKEPPEDVAQRAARLKTFPCKRFKEG--TCQRGDQCCYSHSPPTPRVSADAAP 637
QNK+ E E Q + CK F++G TC G +C Y H+ P R++ P
Sbjct: 308 QNKKNELIEAFKQGMGKKA---CKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKP 360
Score = 30.4 bits (67), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 602 KTFPCKRFKEGTCQRGDQCCYSH 624
K C+ F G C+ G QC +SH
Sbjct: 4 KQITCRYFMHGVCREGSQCLFSH 26
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,573,724
Number of Sequences: 37866
Number of extensions: 1375682
Number of successful extensions: 6059
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 5903
Number of HSP's gapped (non-prelim): 217
length of query: 659
length of database: 18,247,518
effective HSP length: 109
effective length of query: 550
effective length of database: 14,120,124
effective search space: 7766068200
effective search space used: 7766068200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.