Guide to the Human Genome
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Name: MYOT Sequence: fasta or formatted (314aa) NCBI GI: 209693444
Description:

myotilin isoform b

Referenced in:

Muscle

Other entries for this name:
alt prot [498aa] myotilin isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         28           3
 C cysteine            1.3          4           1
 D aspartate           6.1         19           2
 E glutamate           5.4         17           2
 F phenylalanine       4.1         13           1
 G glycine             5.4         17           1
 H histidine           1.6          5           1
 I isoleucine          3.2         10           1
 K lysine              6.4         20           2
 L leucine             8.0         25           2
 M methionine          1.9          6           1
 N asparagine          5.4         17           2
 P proline             5.4         17           3
 Q glutamine           7.0         22           2
 R arginine            6.7         21           2
 S serine              7.0         22           1
 T threonine           4.8         15           2
 V valine              8.0         25           2
 W tryptophan          1.0          3           1
 Y tyrosine            2.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotilin isoform b 
MYOT                  1.000   myotilin isoform a 
MYPN                  0.369   myopalladin 
PALLD                 0.360   palladin 
TTN                   0.169   titin isoform novex-3 
TTN                   0.169   titin isoform N2-A 
TTN                   0.169   titin isoform novex-2 
TTN                   0.169   titin isoform novex-1 
TTN                   0.169   titin isoform N2-B 
MYLK                  0.116   myosin light chain kinase isoform 3A 
MYLK                  0.116   myosin light chain kinase isoform 1 
MYLK                  0.116   myosin light chain kinase isoform 3B 
MYLK                  0.116   myosin light chain kinase isoform 2 
OBSCN                 0.109   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.109   obscurin, cytoskeletal calmodulin and titin-interac...
HMCN1                 0.109   hemicentin 1 
ROBO2                 0.101   roundabout, axon guidance receptor, homolog 2 isofor...
ROBO2                 0.099   roundabout, axon guidance receptor, homolog 2 isofo...
PXDNL                 0.099   peroxidasin homolog-like 
PXDN                  0.098   peroxidasin 
SDK2                  0.094   sidekick 2 
LOC100134174          0.094   PREDICTED: similar to sidekick homolog 2 (chicken) ...
LRIG3                 0.094   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.094   leucine-rich repeats and immunoglobulin-like domain...
ROBO1                 0.093   roundabout 1 isoform b 
ROBO1                 0.093   roundabout 1 isoform a 
ROBO1                 0.093   roundabout 1 isoform d 
ROBO1                 0.093   roundabout 1 isoform c 
LOC642132             0.093   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.093   PREDICTED: similar to roundabout 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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