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Search of human proteins with 209364600
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209364600 acyl-Coenzyme A binding domain containing 4
isoform 3 [Homo sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform... 576 e-165
gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform... 495 e-140
gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform... 495 e-140
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform... 413 e-116
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ... 413 e-116
gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform... 149 3e-36
gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform... 149 3e-36
gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens] 73 3e-13
gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens] 73 3e-13
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 73 3e-13
gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens] 71 9e-13
gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sa... 61 1e-09
gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sa... 55 5e-08
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 50 3e-06
gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens] 41 0.001
gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens] 41 0.001
gi|89038414 PREDICTED: similar to diazepam binding inhibitor [Ho... 41 0.001
gi|134031945 SCO-spondin [Homo sapiens] 34 0.15
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 34 0.15
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa... 33 0.20
gi|150417975 RhoA/RAC/CDC42 exchange factor isoform 1 [Homo sapi... 33 0.34
gi|162287076 RhoA/RAC/CDC42 exchange factor isoform 3 [Homo sapi... 33 0.34
gi|189181750 human immunodeficiency virus type I enhancer bindin... 32 0.45
gi|116089331 human immunodeficiency virus type I enhancer bindin... 32 0.45
gi|157694497 zinc finger and BTB domain containing 10 isoform b ... 32 0.45
gi|157694499 zinc finger and BTB domain containing 10 isoform a ... 32 0.45
gi|130502140 NEZHA isoform 2 [Homo sapiens] 32 0.58
gi|122937255 NEZHA isoform 1 [Homo sapiens] 32 0.58
gi|193211603 pleckstrin homology domain containing, family G (wi... 32 0.58
gi|193211598 pleckstrin homology domain containing, family G (wi... 32 0.58
>gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform 3
[Homo sapiens]
Length = 268
Score = 576 bits (1484), Expect = e-165
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
Query: 181 CDSLEQLEPELSSGQHLEESVIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHYRRA 240
CDSLEQLEPELSSGQHLEESVIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHYRRA
Sbjct: 181 CDSLEQLEPELSSGQHLEESVIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHYRRA 240
Query: 241 CRRCRRGCRAWRACPGPLSSLTLSVRLE 268
CRRCRRGCRAWRACPGPLSSLTLSVRLE
Sbjct: 241 CRRCRRGCRAWRACPGPLSSLTLSVRLE 268
>gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform 1
[Homo sapiens]
Length = 341
Score = 495 bits (1274), Expect = e-140
Identities = 240/277 (86%), Positives = 242/277 (87%), Gaps = 20/277 (7%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPES----------- 169
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSP S
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPASLWAVTLPTPPQ 180
Query: 170 -------HSPRDLDSEVFCDSLEQLEPELSSGQHLEESVIPGTAPCPPQRKRGCGAARRG 222
+PR S + S SSGQHLEESVIPGTAPCPPQRKRGCGAARRG
Sbjct: 181 SPIHPGTWTPRF--SVIPWSSWSLSWFGQSSGQHLEESVIPGTAPCPPQRKRGCGAARRG 238
Query: 223 PRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLS 259
PRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLS
Sbjct: 239 PRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLS 275
>gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform 1
[Homo sapiens]
Length = 341
Score = 495 bits (1274), Expect = e-140
Identities = 240/277 (86%), Positives = 242/277 (87%), Gaps = 20/277 (7%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPES----------- 169
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSP S
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPASLWAVTLPTPPQ 180
Query: 170 -------HSPRDLDSEVFCDSLEQLEPELSSGQHLEESVIPGTAPCPPQRKRGCGAARRG 222
+PR S + S SSGQHLEESVIPGTAPCPPQRKRGCGAARRG
Sbjct: 181 SPIHPGTWTPRF--SVIPWSSWSLSWFGQSSGQHLEESVIPGTAPCPPQRKRGCGAARRG 238
Query: 223 PRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLS 259
PRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLS
Sbjct: 239 PRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLS 275
>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 413 bits (1061), Expect = e-116
Identities = 203/260 (78%), Positives = 215/260 (82%), Gaps = 3/260 (1%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
Query: 181 CDSLEQLEPELSSGQHLEES---VIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHY 237
CDSLEQLEPEL + S P +P PP +K G + GP+ G
Sbjct: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
Query: 238 RRACRRCRRGCRAWRACPGP 257
+ + + + ++ + P P
Sbjct: 241 QESMQEVQARVQSLESMPRP 260
>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 413 bits (1061), Expect = e-116
Identities = 203/260 (78%), Positives = 215/260 (82%), Gaps = 3/260 (1%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
Query: 181 CDSLEQLEPELSSGQHLEES---VIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHY 237
CDSLEQLEPEL + S P +P PP +K G + GP+ G
Sbjct: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
Query: 238 RRACRRCRRGCRAWRACPGP 257
+ + + + ++ + P P
Sbjct: 241 QESMQEVQARVQSLESMPRP 260
>gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform 2
[Homo sapiens]
Length = 490
Score = 149 bits (376), Expect = 3e-36
Identities = 66/113 (58%), Positives = 89/113 (78%), Gaps = 4/113 (3%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
+ +F+AAV VIQ+LPKNGS++P+ E ML+FYS+YKQAT GPC + RPGFWDPIGRYKWDA
Sbjct: 9 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 68
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPD 125
W+SLG M++EEAM AY+ EMK K+I+T+P+ E E++ P Y+++ D
Sbjct: 69 WSSLGDMTKEEAMIAYVEEMK----KIIETMPMTEKVEELLRVIGPFYEIVED 117
Score = 29.3 bits (64), Expect = 3.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 170 HSPRDLDSEVFCDSLEQLEPELS 192
H D DSEV+CDS+EQ E S
Sbjct: 256 HLTSDSDSEVYCDSMEQFGQEES 278
>gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1
[Homo sapiens]
Length = 525
Score = 149 bits (376), Expect = 3e-36
Identities = 66/113 (58%), Positives = 89/113 (78%), Gaps = 4/113 (3%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
+ +F+AAV VIQ+LPKNGS++P+ E ML+FYS+YKQAT GPC + RPGFWDPIGRYKWDA
Sbjct: 44 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 103
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPD 125
W+SLG M++EEAM AY+ EMK K+I+T+P+ E E++ P Y+++ D
Sbjct: 104 WSSLGDMTKEEAMIAYVEEMK----KIIETMPMTEKVEELLRVIGPFYEIVED 152
Score = 29.3 bits (64), Expect = 3.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 170 HSPRDLDSEVFCDSLEQLEPELS 192
H D DSEV+CDS+EQ E S
Sbjct: 291 HLTSDSDSEVYCDSMEQFGQEES 313
>gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens]
Length = 87
Score = 72.8 bits (177), Expect = 3e-13
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
WN L S+E+AM AYI +++ + +K
Sbjct: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
>gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens]
Length = 104
Score = 72.8 bits (177), Expect = 3e-13
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 7 SPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIG 66
+P + +F+ A +++L +PS EEML Y +YKQAT+G RPG D G
Sbjct: 14 NPGTGTEAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTG 69
Query: 67 RYKWDAWNSLGKMSREEAMSAYITEMKLVAQK 98
+ KWDAWN L S+E+AM AYI +++ + +K
Sbjct: 70 KAKWDAWNELKGTSKEDAMKAYINKVEELKKK 101
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 72.8 bits (177), Expect = 3e-13
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
Query: 73 WNSLGKMSREEAMSAYI 89
WN+LG + +E A Y+
Sbjct: 66 WNALGSLPKEAARQNYV 82
>gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens]
Length = 88
Score = 71.2 bits (173), Expect = 9e-13
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
Query: 75 SLGKMSREEAMSAYITEMKLVAQK 98
L S+E+AM AYI +++ + +K
Sbjct: 62 ELKGTSKEDAMKAYINKVEELKKK 85
>gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo
sapiens]
Length = 282
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 6 ESPEPDCQKQ-FQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDP 64
E E C + F+ A + +Q L + S E++L Y+ YKQ +G C P+P F+D
Sbjct: 35 EIEETSCLAELFEKAAAHLQGLIQVASR----EQLLYLYARYKQVKVGNCNTPKPSFFDF 90
Query: 65 IGRYKWDAWNSLGKMSREEAMSAYITEMK 93
G+ KW+AW +LG S +AM YI +K
Sbjct: 91 EGKQKWEAWKALGDSSPSQAMQEYIAVVK 119
>gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo
sapiens]
Length = 88
Score = 55.5 bits (132), Expect = 5e-08
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Q F A ++ L RP E+ Y YKQA +G + PG D G+ KW+A
Sbjct: 4 QADFDRAAEDVRKLKA----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEA 59
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
WN +S E+A SAYI++ K + +K
Sbjct: 60 WNLKKGLSTEDATSAYISKAKELIEK 85
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 49.7 bits (117), Expect = 3e-06
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 31 SYRPSYEEMLRFYSYYKQATMGPC---LVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSA 87
++ P+YEE L+ + +KQ MGP P GF+D +G + W +LG MS+E+AM
Sbjct: 101 AFHPTYEEKLKLVALHKQVLMGPYNPDTCPEVGFFDVLGNDRRREWAALGNMSKEDAMVE 160
Query: 88 YI 89
++
Sbjct: 161 FV 162
>gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RP EE+ Y YKQA +G + + G+ KW+A N +S E+ M A+I++
Sbjct: 20 RPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQKGLSEEDMMRAFISKA 79
Query: 93 KLVAQK 98
+ + +K
Sbjct: 80 EELIEK 85
>gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RP EE+ Y YKQA +G + + G+ KW+A N +S E+ M A+I++
Sbjct: 20 RPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQKGLSEEDMMRAFISKA 79
Query: 93 KLVAQK 98
+ + +K
Sbjct: 80 EELIEK 85
>gi|89038414 PREDICTED: similar to diazepam binding inhibitor
[Homo sapiens]
Length = 88
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RP EE+ Y YKQA +G + + G+ KW+A N +S E+ M A+I++
Sbjct: 20 RPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQKGLSEEDMMRAFISKA 79
Query: 93 KLVAQK 98
+ + +K
Sbjct: 80 EELIEK 85
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 33.9 bits (76), Expect = 0.15
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Query: 209 PPQRKRGCGA----ARRGPRSWTCGCWGQFEHYRRACRRCR-RGCRAWRACPGP 257
P ++GCGA + GP S TCG WGQ RRC G + CPGP
Sbjct: 1687 PSPEEQGCGAWGPWSPWGPCSRTCGPWGQ-----GRSRRCSPLGLLVLQNCPGP 1735
>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
Length = 621
Score = 33.9 bits (76), Expect = 0.15
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 12/101 (11%)
Query: 159 PKEPAPPSPESHSPRDLDSEVFCDSLEQLEPELSSGQHLEESVIPGT----APCPPQRKR 214
P+ P SPE+H+ E C+ + + PE+ S ++ ++ G+ +P P +
Sbjct: 516 PERPMNNSPEAHTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRS 575
Query: 215 GCGAARRGPRSWTCGCWGQFEHYRRAC--RRCRRGCRAWRA 253
GC + W E+ C + CR AW A
Sbjct: 576 GCENPPIVSKDW------DNEYCSNECVVKHCRDVFLAWVA 610
>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Homo sapiens]
Length = 269
Score = 33.5 bits (75), Expect = 0.20
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 149 VGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFCDSLEQLEPELSSGQHLEESVIPGTAPC 208
+G +PP LP++ PP+ +S++P S SL QL + SS + G
Sbjct: 173 MGTTEQPP-LPQQTQPPAKQSNNPPLQRS----SSLIQLTSQNSSPNQQRTPQVIGV--- 224
Query: 209 PPQRKRGCGAARRGPR---SWTCGCWGQFEHYRRACRR 243
+ + A RGPR TC G+ HY C +
Sbjct: 225 --MQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTK 260
>gi|150417975 RhoA/RAC/CDC42 exchange factor isoform 1 [Homo
sapiens]
Length = 580
Score = 32.7 bits (73), Expect = 0.34
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 24/89 (26%)
Query: 146 NGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFCDSLE--------------QLEPEL 191
+G +S PC P PP P S R LD C S+E LEP L
Sbjct: 56 SGPSSGLSSGPC---SPGPPGPVSGLRRWLDHSKHCLSVETEADSGQAGPYENWMLEPAL 112
Query: 192 SSGQHLEESVI-------PGTAPCPPQRK 213
++G+ L E + PG PP+ +
Sbjct: 113 ATGEELPELTLLTTLLEGPGDKTQPPEEE 141
>gi|162287076 RhoA/RAC/CDC42 exchange factor isoform 3 [Homo
sapiens]
Length = 619
Score = 32.7 bits (73), Expect = 0.34
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 24/89 (26%)
Query: 146 NGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFCDSLE--------------QLEPEL 191
+G +S PC P PP P S R LD C S+E LEP L
Sbjct: 95 SGPSSGLSSGPC---SPGPPGPVSGLRRWLDHSKHCLSVETEADSGQAGPYENWMLEPAL 151
Query: 192 SSGQHLEESVI-------PGTAPCPPQRK 213
++G+ L E + PG PP+ +
Sbjct: 152 ATGEELPELTLLTTLLEGPGDKTQPPEEE 180
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 32.3 bits (72), Expect = 0.45
Identities = 54/216 (25%), Positives = 71/216 (32%), Gaps = 19/216 (8%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RPS E + +A P L P+P P + +S+ + R A S ++
Sbjct: 1876 RPSSEAPPPGPPHALRADSSPILGPQPPD-APASGTEATRGSSVSEAERLTASSCSMSSQ 1934
Query: 93 KLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPDMPRPP--ETFLRRVTGWKEQVVNGDVG 150
+ + PLG V +D G V P P P E R K + D
Sbjct: 1935 SMPGLPWLGPAPLGSVEKDT-GSALSYKPVSPRRPWSPSKEAGSRPPLARKHSLTKNDSS 1993
Query: 151 AVSEPPCL-PKEPAPPSPESH-------------SPR-DLDSEVFCDSLEQLEPELSSGQ 195
P P+ AP P H SPR L C +L P
Sbjct: 1994 PQRCSPAREPQASAPSPPGLHVDPGRGMGALPCGSPRLQLSPLTLCPLGRELAPRAHVLS 2053
Query: 196 HLEESVIPGTAPCPPQRKRGCGAARRGPRSWTCGCW 231
LE + PG P R+ G A PRS G W
Sbjct: 2054 KLEGTTDPGLPRYSPTRRWSPGQAESPPRSAPPGKW 2089
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 32.3 bits (72), Expect = 0.45
Identities = 54/216 (25%), Positives = 71/216 (32%), Gaps = 19/216 (8%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RPS E + +A P L P+P P + +S+ + R A S ++
Sbjct: 1876 RPSSEAPPPGPPHALRADSSPILGPQPPD-APASGTEATRGSSVSEAERLTASSCSMSSQ 1934
Query: 93 KLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPDMPRPP--ETFLRRVTGWKEQVVNGDVG 150
+ + PLG V +D G V P P P E R K + D
Sbjct: 1935 SMPGLPWLGPAPLGSVEKDT-GSALSYKPVSPRRPWSPSKEAGSRPPLARKHSLTKNDSS 1993
Query: 151 AVSEPPCL-PKEPAPPSPESH-------------SPR-DLDSEVFCDSLEQLEPELSSGQ 195
P P+ AP P H SPR L C +L P
Sbjct: 1994 PQRCSPAREPQASAPSPPGLHVDPGRGMGALPCGSPRLQLSPLTLCPLGRELAPRAHVLS 2053
Query: 196 HLEESVIPGTAPCPPQRKRGCGAARRGPRSWTCGCW 231
LE + PG P R+ G A PRS G W
Sbjct: 2054 KLEGTTDPGLPRYSPTRRWSPGQAESPPRSAPPGKW 2089
>gi|157694497 zinc finger and BTB domain containing 10 isoform b
[Homo sapiens]
Length = 847
Score = 32.3 bits (72), Expect = 0.45
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 155 PPCLPKEPAPPSPESHSP---RDLDSEVFCDSLEQLEPELSSG------QHLEESVIPGT 205
P P++P PP+P + P R D EV + LE + E S+G + +E ++P
Sbjct: 40 PQPQPRQPPPPAPPALQPPNGRGADEEVELEGLEPQDLEASAGPAAGAAEEAKELLLPQD 99
Query: 206 APCPPQRKRGCG 217
A P G G
Sbjct: 100 AGGPTSLGGGAG 111
>gi|157694499 zinc finger and BTB domain containing 10 isoform a
[Homo sapiens]
Length = 871
Score = 32.3 bits (72), Expect = 0.45
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 155 PPCLPKEPAPPSPESHSP---RDLDSEVFCDSLEQLEPELSSG------QHLEESVIPGT 205
P P++P PP+P + P R D EV + LE + E S+G + +E ++P
Sbjct: 40 PQPQPRQPPPPAPPALQPPNGRGADEEVELEGLEPQDLEASAGPAAGAAEEAKELLLPQD 99
Query: 206 APCPPQRKRGCG 217
A P G G
Sbjct: 100 AGGPTSLGGGAG 111
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 32.0 bits (71), Expect = 0.58
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 118 PLYQVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDS 177
P+Y P+ P P L VG S+PP P E +P + S SP +S
Sbjct: 517 PVYMPHPETPSKPSPCL--------------VGEASKPPA-PSEGSPKAVAS-SPAATNS 560
Query: 178 EVFCDSLEQLEPELSSGQHLEESVIPGTAPCPPQ 211
EV S + + +L + + P + P PP+
Sbjct: 561 EVKMTSFAERKKQLVKAEAEAGAGSPTSTPAPPE 594
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 32.0 bits (71), Expect = 0.58
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 118 PLYQVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDS 177
P+Y P+ P P L VG S+PP P E +P + S SP +S
Sbjct: 544 PVYMPHPETPSKPSPCL--------------VGEASKPPA-PSEGSPKAVAS-SPAATNS 587
Query: 178 EVFCDSLEQLEPELSSGQHLEESVIPGTAPCPPQ 211
EV S + + +L + + P + P PP+
Sbjct: 588 EVKMTSFAERKKQLVKAEAEAGAGSPTSTPAPPE 621
>gi|193211603 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 2 [Homo sapiens]
Length = 1110
Score = 32.0 bits (71), Expect = 0.58
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 106 GEVAEDMF----GYFEPLYQVIPDMPRPPETFLRRVTGWK 141
GE + DM G F+ LYQV + R E FL+ +TGW+
Sbjct: 400 GEPSLDMLLQAQGSFQELYQVAQEQVRQGEKFLQPLTGWE 439
>gi|193211598 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 32.0 bits (71), Expect = 0.58
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 106 GEVAEDMF----GYFEPLYQVIPDMPRPPETFLRRVTGWK 141
GE + DM G F+ LYQV + R E FL+ +TGW+
Sbjct: 481 GEPSLDMLLQAQGSFQELYQVAQEQVRQGEKFLQPLTGWE 520
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,581,754
Number of Sequences: 37866
Number of extensions: 735642
Number of successful extensions: 4330
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 4130
Number of HSP's gapped (non-prelim): 256
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.