Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 209364547
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
sapiens]
(677 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa... 1375 0.0
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi... 1286 0.0
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa... 1176 0.0
gi|149588643 zinc finger protein 283 [Homo sapiens] 56 1e-07
gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... 47 6e-05
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 42 0.002
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [... 41 0.004
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... 40 0.007
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 39 0.021
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 39 0.021
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 37 0.046
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 37 0.046
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 37 0.060
gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens] 37 0.060
gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens] 37 0.060
gi|4826870 nucleobindin 2 [Homo sapiens] 37 0.078
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 37 0.078
gi|18087817 coiled-coil domain containing 34 isoform 2 [Homo sap... 37 0.078
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 37 0.078
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 36 0.13
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 36 0.13
gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens] 35 0.23
gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens] 35 0.23
gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens] 35 0.23
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 35 0.30
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 35 0.30
gi|241982780 programmed cell death 6 interacting protein isoform... 35 0.30
gi|22027538 programmed cell death 6 interacting protein isoform ... 35 0.30
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 35 0.30
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 35 0.30
>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
sapiens]
Length = 677
Score = 1375 bits (3560), Expect = 0.0
Identities = 677/677 (100%), Positives = 677/677 (100%)
Query: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
Sbjct: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
Query: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
Sbjct: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
Query: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
Sbjct: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
Query: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
Sbjct: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
Query: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
Sbjct: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
Query: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
Sbjct: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
Query: 361 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL 420
EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL
Sbjct: 361 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL 420
Query: 421 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 480
TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
Sbjct: 421 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 480
Query: 481 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 540
YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
Sbjct: 481 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 540
Query: 541 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 600
LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
Sbjct: 541 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 600
Query: 601 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 660
VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
Sbjct: 601 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 660
Query: 661 QLPDNTDHRPTSKPTKN 677
QLPDNTDHRPTSKPTKN
Sbjct: 661 QLPDNTDHRPTSKPTKN 677
>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
sapiens]
Length = 644
Score = 1286 bits (3329), Expect = 0.0
Identities = 644/677 (95%), Positives = 644/677 (95%), Gaps = 33/677 (4%)
Query: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
Sbjct: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
Query: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
Sbjct: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
Query: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
Sbjct: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
Query: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
Sbjct: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
Query: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL
Sbjct: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
Query: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
Sbjct: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
Query: 361 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL 420
EMAENYFQLSVDWPE SSLAMSPGEEIL
Sbjct: 361 EMAENYFQLSVDWPE---------------------------------SSLAMSPGEEIL 387
Query: 421 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 480
TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
Sbjct: 388 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 447
Query: 481 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 540
YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
Sbjct: 448 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 507
Query: 541 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 600
LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
Sbjct: 508 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 567
Query: 601 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 660
VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
Sbjct: 568 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 627
Query: 661 QLPDNTDHRPTSKPTKN 677
QLPDNTDHRPTSKPTKN
Sbjct: 628 QLPDNTDHRPTSKPTKN 644
>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
sapiens]
Length = 601
Score = 1176 bits (3043), Expect = 0.0
Identities = 601/677 (88%), Positives = 601/677 (88%), Gaps = 76/677 (11%)
Query: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF
Sbjct: 1 MEETMKLATMEDTVEYCLFLIPDESRDSDKHKEILQKYIERIITRFAPMLVPYIWQNQPF 60
Query: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE
Sbjct: 61 NLKYKPGKGGVPAHMFGVTKFGDNIEDEWFIVYVIKQITKEFPELVARIEDNDGEFLLIE 120
Query: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK
Sbjct: 121 AADFLPKWLDPENSTNRVFFCHGELCIIPAPRKSGAESWLPTTPPTIPQALNIITAHSEK 180
Query: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP
Sbjct: 181 ILASESIRAAVNRRIRGYPEKIQASLHRAHCFLPAGIVAVLKQRPRLVAAAVQAFYLRDP 240
Query: 241 IDLRACRVFKTFLPETRIMTSVTFTKCLYAQLVQQRFVPDRRSGYRLPPPSDPQYRAHEL 300
IDLRACRVFKTFLPETRIMTS
Sbjct: 241 IDLRACRVFKTFLPETRIMTS--------------------------------------- 261
Query: 301 GMKLAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 360
AHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL
Sbjct: 262 ----AHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERL 317
Query: 361 EMAENYFQLSVDWPERLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEIL 420
EMAENYFQLSVDWPE SSLAMSPGEEIL
Sbjct: 318 EMAENYFQLSVDWPE---------------------------------SSLAMSPGEEIL 344
Query: 421 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 480
TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN
Sbjct: 345 TLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQN 404
Query: 481 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 540
YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD
Sbjct: 405 YDLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDD 464
Query: 541 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 600
LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ
Sbjct: 465 LDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQELAHTCISKSFTTRNQ 524
Query: 601 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 660
VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV
Sbjct: 525 VEPVSQTTDNNSDEEDSGTGESVMAPVDVDLNLVSNILESYSSQAGLAGPASNLLQSMGV 584
Query: 661 QLPDNTDHRPTSKPTKN 677
QLPDNTDHRPTSKPTKN
Sbjct: 585 QLPDNTDHRPTSKPTKN 601
>gi|149588643 zinc finger protein 283 [Homo sapiens]
Length = 679
Score = 56.2 bits (134), Expect = 1e-07
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSS----LAMSPGEEILTLL------QTIPF 428
VQW D G LQAPPPGFT F CLSLLS+WD SS SP EE L +T+
Sbjct: 11 VQWCDLGSLQAPPPGFTLFSCLSLLSSWDYSSGFSGFCASPIEESHGALISSCNSRTMTD 70
Query: 429 DIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEV 486
+ + A + E +W L P Q D L + + + S VS + + + Y+ ++
Sbjct: 71 GLVTFRDVAIDFSQE---EWECLDPAQRD-LYVDVMLENYSNLVSLDLESKTYETKKI 124
>gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA
synthase isoform 3 [Homo sapiens]
Length = 500
Score = 47.0 bits (110), Expect = 6e-05
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGE 417
+Q D G LQ PPPGFTPF CLSL S+WD PG+
Sbjct: 1 MQCDDLGSLQPPPPGFTPFACLSLPSSWDYRRPPPHPGK 39
>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
sapiens]
Length = 440
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSL 411
VQWR+ G LQ PPGF F CL L S+WD S+
Sbjct: 366 VQWRNLGSLQPLPPGFKQFSCLILPSSWDYRSV 398
>gi|121583542 mitogen-activated protein kinase kinase kinase 15
[Homo sapiens]
Length = 788
Score = 40.8 bits (94), Expect = 0.004
Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNS 409
VQW D G LQ PP F F CLSL S+WD S
Sbjct: 28 VQWHDLGSLQPLPPRFKRFSCLSLQSSWDYS 58
>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
sapiens]
Length = 165
Score = 40.0 bits (92), Expect = 0.007
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLST 405
VQWRD G LQ PPPGF CLSL T
Sbjct: 37 VQWRDLGSLQPPPPGFKQVFCLSLPRT 63
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 38.5 bits (88), Expect = 0.021
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEILTLLQTI 426
V+ RD LQ PPGF F CLSL S+WD S P + L++T+
Sbjct: 311 VRCRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPA-NFVVLVETV 357
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 38.5 bits (88), Expect = 0.021
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEILTLLQTI 426
V+ RD LQ PPGF F CLSL S+WD S P + L++T+
Sbjct: 311 VRCRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPA-NFVVLVETV 357
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 37.4 bits (85), Expect = 0.046
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 443 EDDDQWLDLSPDQLDQLLQEAVGKKE--SESVSKEEKEQNYDLTEVSESMKAFISKVSTH 500
E+D + + D +++L E ++E +S KEE+E Y+ ES + + +
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADE 653
Query: 501 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 560
KG E + +E DAD L F++ ++D +++D D E L DDD + +
Sbjct: 654 KGLEAADKKAEEG---DADEKL--FEESDDKEDEDADGKEVEDAD-EKLFEDDDSNEKLF 707
Query: 561 EPGEEASLK 569
+ E++S K
Sbjct: 708 DEEEDSSEK 716
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 37.4 bits (85), Expect = 0.046
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 443 EDDDQWLDLSPDQLDQLLQEAVGKKE--SESVSKEEKEQNYDLTEVSESMKAFISKVSTH 500
E+D + + D +++L E ++E +S KEE+E Y+ ES + + +
Sbjct: 594 ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADE 653
Query: 501 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 560
KG E + +E DAD L F++ ++D +++D D E L DDD + +
Sbjct: 654 KGLEAADKKAEEG---DADEKL--FEESDDKEDEDADGKEVEDAD-EKLFEDDDSNEKLF 707
Query: 561 EPGEEASLK 569
+ E++S K
Sbjct: 708 DEEEDSSEK 716
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 37.0 bits (84), Expect = 0.060
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 429 DIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSE 488
D+EDL++E + DD + + + + L ++S S E+ + ++D++++ +
Sbjct: 129 DLEDLEEEEVSDMGNDDPEMGERAENSSKSDL------RKSPVFSDEDSDLDFDISKLEQ 182
Query: 489 SMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFEC 548
K +KG PRE S I D L+ + L E + D +DE+ E
Sbjct: 183 QSKV------QNKGQGKPREKS---IVDDKFFKLSEMEAYLENIEKEEERKDDNDEEEED 233
Query: 549 LDSDDDLDFETHEPGEEASLK 569
+D +D+D + E G S K
Sbjct: 234 IDFFEDIDSDEDEGGLFGSKK 254
>gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens]
Length = 1302
Score = 37.0 bits (84), Expect = 0.060
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 30/225 (13%)
Query: 417 EEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEE 476
+E+ +++T+ + LK E N +D DL P + Q + + VG K SES + +
Sbjct: 489 DELKNMVKTVQTIVHRLKDEETN-----EDSGRDLKPHEDQQDINKDVGVKTSESTTTVK 543
Query: 477 KEQNYDLTEVSESMKAFI-SKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNE 535
++V E K I + V E P P+T + + N +
Sbjct: 544 -------SKVDEREKYMIGNSVQKISEPEAEISPGSLPVTANMKASENLKHIV------- 589
Query: 536 SDSDDLDDEDFECLDSDDDLDF-ETHEPGEEASLKG----TLDNLKSYMAQMDQELAHTC 590
+ DD+ +E E L SD+++ E P E S+ L N K + L+
Sbjct: 590 -NHDDVFEESEE-LSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKETDSLSDEV 647
Query: 591 ISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPV---DVDLN 632
S + S+ +D+ S DS S+ +PV +D+N
Sbjct: 648 THNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIDIN 692
>gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens]
Length = 1371
Score = 37.0 bits (84), Expect = 0.060
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 30/225 (13%)
Query: 417 EEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKEE 476
+E+ +++T+ + LK E N +D DL P + Q + + VG K SES + +
Sbjct: 489 DELKNMVKTVQTIVHRLKDEETN-----EDSGRDLKPHEDQQDINKDVGVKTSESTTTVK 543
Query: 477 KEQNYDLTEVSESMKAFI-SKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNE 535
++V E K I + V E P P+T + + N +
Sbjct: 544 -------SKVDEREKYMIGNSVQKISEPEAEISPGSLPVTANMKASENLKHIV------- 589
Query: 536 SDSDDLDDEDFECLDSDDDLDF-ETHEPGEEASLKG----TLDNLKSYMAQMDQELAHTC 590
+ DD+ +E E L SD+++ E P E S+ L N K + L+
Sbjct: 590 -NHDDVFEESEE-LSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKETDSLSDEV 647
Query: 591 ISKSFTTRNQVEPVSQTTDNNSDEEDSGTGESVMAPV---DVDLN 632
S + S+ +D+ S DS S+ +PV +D+N
Sbjct: 648 THNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIDIN 692
>gi|4826870 nucleobindin 2 [Homo sapiens]
Length = 420
Score = 36.6 bits (83), Expect = 0.078
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 419 ILTLLQTIPFDIEDLKK------EAANLPPEDD----DQWLDLSPDQL--DQLLQEAVGK 466
+LT L+ +P DI+ K E+A + P D D++L D L D+ +E + K
Sbjct: 18 LLTALEAVPIDIDKTKVQNIHPVESAKIEPPDTGLYYDEYLKQVIDVLETDKHFREKLQK 77
Query: 467 KESESVSKEEKEQNYDLTEVSESMKAFISKVSTHKGAEL-----PREPSEAPITFDADSF 521
+ E + + DL VS ++ + ++ + L + S I D +
Sbjct: 78 ADIEEIKSGRLSKELDL--VSHHVRTKLDELKRQEVGRLRMLIKAKLDSLQDIGMDHQAL 135
Query: 522 LNYFDKILGPRPNESDSDDLD------DEDFECLDSDDDLDFETHEPGEEASLKGTLDNL 575
L FD + P++ +S DLD D E D +F+ +E +E + L L
Sbjct: 136 LKQFDHLNHLNPDKFESTDLDMLIKAATSDLEHYDKTRHEEFKKYEMMKEHERREYLKTL 195
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 0.078
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 501 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 560
+G E+ R PS P+ + LG + + D DD D ED E +D ++D+D + H
Sbjct: 43 QGLEVVRSPSP-PLPLSCSNSTRSLLSPLGHQSFQFDEDDGDGEDEEDVDDEEDVDEDAH 101
Query: 561 E-PGEEASLKG 570
+ + ASL+G
Sbjct: 102 DSEAKVASLRG 112
>gi|18087817 coiled-coil domain containing 34 isoform 2 [Homo
sapiens]
Length = 229
Score = 36.6 bits (83), Expect = 0.078
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 501 KGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDEDFECLDSDDDLDFETH 560
+G E+ R PS P+ + LG + + D DD D ED E +D ++D+D + H
Sbjct: 43 QGLEVVRSPSP-PLPLSCSNSTRSLLSPLGHQSFQFDEDDGDGEDEEDVDDEEDVDEDAH 101
Query: 561 E-PGEEASLKG 570
+ + ASL+G
Sbjct: 102 DSEAKVASLRG 112
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
Length = 1079
Score = 36.6 bits (83), Expect = 0.078
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 376 RLEVQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSP 415
R +QW D LQ PPPGF F LSL ++W+ L P
Sbjct: 995 RAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCP 1034
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 35.8 bits (81), Expect = 0.13
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEILTLLQTI 426
V+ RD LQ PPGF F CLSL S+W S P + L++T+
Sbjct: 311 VRCRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPA-NFVVLVETV 357
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 35.8 bits (81), Expect = 0.13
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 379 VQWRDPGLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEILTLLQTI 426
V+ RD LQ PPGF F CLSL S+W S P + L++T+
Sbjct: 311 VRCRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPA-NFVVLVETV 357
>gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens]
Length = 1054
Score = 35.0 bits (79), Expect = 0.23
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 34/128 (26%)
Query: 465 GKKESESVSKEEKEQNY--DLTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFL 522
GK+ ++SV + K +++ D+ + + K F++K E S+ P+ D F
Sbjct: 769 GKENTDSVVMQPKRKHFIKDIRHLPVNSKEFLAK-----------EESQIPV--DEVFFH 815
Query: 523 NYFDKILGPRPNESDSD-----DLDDEDFE----------CLDS-DDDLDFETHEPGEEA 566
Y+ K+ + D+D D+DDE+FE C S DD+DF + +
Sbjct: 816 RYYKKVAVKEKQKRDADEESIEDVDDEEFEELIDTFEDDNCFSSGKDDMDFAGN---VKK 872
Query: 567 SLKGTLDN 574
KG DN
Sbjct: 873 RTKGAKDN 880
>gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 35.0 bits (79), Expect = 0.23
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 36/122 (29%)
Query: 494 ISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDE-------DF 546
I K HKG R ++ T DSF N+F P +S DLDD+ DF
Sbjct: 273 IKKKQKHKGRGTVRTVTK---TVSNDSFFNFFAP-----PEVPESGDLDDDAEAILAADF 324
Query: 547 EC---------------------LDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQE 585
E D DDD D E E EE +G +N Y + DQ
Sbjct: 325 EIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQN 384
Query: 586 LA 587
A
Sbjct: 385 PA 386
>gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 35.0 bits (79), Expect = 0.23
Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 36/122 (29%)
Query: 494 ISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDE-------DF 546
I K HKG R ++ T DSF N+F P +S DLDD+ DF
Sbjct: 273 IKKKQKHKGRGTVRTVTK---TVSNDSFFNFFAP-----PEVPESGDLDDDAEAILAADF 324
Query: 547 EC---------------------LDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQMDQE 585
E D DDD D E E EE +G +N Y + DQ
Sbjct: 325 EIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQN 384
Query: 586 LA 587
A
Sbjct: 385 PA 386
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 34.7 bits (78), Expect = 0.30
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 536 SDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQ------MDQELAHT 589
+D DD DD++ + + DDD DF+ E E+A +K ++ + + AQ D + + T
Sbjct: 160 ADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSST 219
Query: 590 CISKSFTTRNQVEPVSQTTDNNSDEED 616
SK + + E +T S ED
Sbjct: 220 PRSKGQESFKKQEKTPKTPKGPSSVED 246
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 34.7 bits (78), Expect = 0.30
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 536 SDSDDLDDEDFECLDSDDDLDFETHEPGEEASLKGTLDNLKSYMAQ------MDQELAHT 589
+D DD DD++ + + DDD DF+ E E+A +K ++ + + AQ D + + T
Sbjct: 160 ADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSST 219
Query: 590 CISKSFTTRNQVEPVSQTTDNNSDEED 616
SK + + E +T S ED
Sbjct: 220 PRSKGQESFKKQEKTPKTPKGPSSVED 246
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 34.7 bits (78), Expect = 0.30
Identities = 20/76 (26%), Positives = 43/76 (56%)
Query: 416 GEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKE 475
G E++ +L+++ +++++KKE L + D++ L L Q+ V +E+ SV++
Sbjct: 550 GSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTEL 609
Query: 476 EKEQNYDLTEVSESMK 491
++ T+V ES+K
Sbjct: 610 DRVYGGLTTKVQESLK 625
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 34.7 bits (78), Expect = 0.30
Identities = 20/76 (26%), Positives = 43/76 (56%)
Query: 416 GEEILTLLQTIPFDIEDLKKEAANLPPEDDDQWLDLSPDQLDQLLQEAVGKKESESVSKE 475
G E++ +L+++ +++++KKE L + D++ L L Q+ V +E+ SV++
Sbjct: 545 GSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTEL 604
Query: 476 EKEQNYDLTEVSESMK 491
++ T+V ES+K
Sbjct: 605 DRVYGGLTTKVQESLK 620
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 34.7 bits (78), Expect = 0.30
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query: 379 VQWRDP-GLLQAPPPGFTPFICLSLLSTWD 407
VQW D G LQ PPPGF+ CLSL +WD
Sbjct: 137 VQWCDDLGSLQPPPPGFS---CLSLPGSWD 163
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 34.7 bits (78), Expect = 0.30
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query: 379 VQWRDP-GLLQAPPPGFTPFICLSLLSTWD 407
VQW D G LQ PPPGF+ CLSL +WD
Sbjct: 137 VQWCDDLGSLQPPPPGFS---CLSLPGSWD 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,557,916
Number of Sequences: 37866
Number of extensions: 1372016
Number of successful extensions: 5286
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 5069
Number of HSP's gapped (non-prelim): 230
length of query: 677
length of database: 18,247,518
effective HSP length: 109
effective length of query: 568
effective length of database: 14,120,124
effective search space: 8020230432
effective search space used: 8020230432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.