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Search of human proteins with 206725424
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|206725424 hypothetical protein LOC127687 isoform 1 [Homo
sapiens]
(110 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|206725424 hypothetical protein LOC127687 isoform 1 [Homo sapi... 231 1e-61
gi|218505682 hypothetical protein LOC127687 isoform 2 [Homo sapi... 100 2e-22
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens] 35 0.010
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 35 0.010
gi|46094079 hepatitis delta antigen-interacting protein A [Homo ... 35 0.017
gi|194294548 hsp70-interacting protein [Homo sapiens] 33 0.064
gi|112363070 hsp70-interacting protein [Homo sapiens] 33 0.064
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.064
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 33 0.064
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 33 0.064
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 33 0.064
gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo sapiens] 33 0.064
gi|66730481 neuregulin 3 [Homo sapiens] 32 0.084
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 32 0.11
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 32 0.11
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 32 0.11
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 32 0.11
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 32 0.11
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens] 32 0.14
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 32 0.14
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ... 32 0.14
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 32 0.14
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ... 32 0.14
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 32 0.14
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 32 0.14
gi|169790811 SHC (Src homology 2 domain containing) transforming... 32 0.14
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 32 0.14
gi|221139761 zinc finger protein 853 [Homo sapiens] 31 0.19
gi|28269693 xylosyltransferase I [Homo sapiens] 31 0.19
gi|239757038 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
>gi|206725424 hypothetical protein LOC127687 isoform 1 [Homo
sapiens]
Length = 110
Score = 231 bits (588), Expect = 1e-61
Identities = 110/110 (100%), Positives = 110/110 (100%)
Query: 1 MEWGPGSDWSRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDAVEQRQRQLLDTIAA 60
MEWGPGSDWSRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDAVEQRQRQLLDTIAA
Sbjct: 1 MEWGPGSDWSRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDAVEQRQRQLLDTIAA 60
Query: 61 CEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP 110
CEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP
Sbjct: 61 CEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP 110
>gi|218505682 hypothetical protein LOC127687 isoform 2 [Homo
sapiens]
Length = 47
Score = 100 bits (250), Expect = 2e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 64 MLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP 110
MLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP
Sbjct: 1 MLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP 47
>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
Length = 2229
Score = 35.4 bits (80), Expect = 0.010
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 3 WGPGSDWSRGEAAGVDRGKAGLGLGGRPPPQ--------PPREERAQQLLDAVEQRQRQL 54
W PG D+ + + R ++ +PPP+ ERA++ + E+R R+
Sbjct: 461 WAPGPDYQKSSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRARE- 519
Query: 55 LDTIAACEEMLRQLGR--RRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAG 104
+ +AAC L+QL + ++ AG A+ P P SA P++ G
Sbjct: 520 -ERLAACAAKLKQLDQKCKQARKAGEARKQAEKEVPWSP--SAEKASPQENG 568
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 35.4 bits (80), Expect = 0.010
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 10/106 (9%)
Query: 4 GPGSDWSRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDA----VEQRQRQLLDTIA 59
GP G +D+G G G + PP+ R E+A Q L A + ++
Sbjct: 525 GPPDARETGRCYPLDKGAEGCSAGAQEPPRASRAEKASQRLAASITWADGESSRICPQET 584
Query: 60 ACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGD 105
L Q G+RRPE S + A P A G P D
Sbjct: 585 PLLHSLTQEGKRRPES------SPEDSATRPPPFDAHVGKPTRRSD 624
>gi|46094079 hepatitis delta antigen-interacting protein A [Homo
sapiens]
Length = 202
Score = 34.7 bits (78), Expect = 0.017
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 42 QLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPK 101
Q L +E RQ +LL A +E+ LG P GG + + GA P P ++ P+
Sbjct: 118 QKLAELEGRQEELLRENLALKELCLALGEEWG-PRGGPSGAGGSGAGPAPELALPPCGPR 176
Query: 102 DAGDGAA 108
D GDG++
Sbjct: 177 DLGDGSS 183
>gi|194294548 hsp70-interacting protein [Homo sapiens]
Length = 359
Score = 32.7 bits (73), Expect = 0.064
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 30 PPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSA 83
PPP+P EER Q L +A+ R + + + LR L + P AG +A
Sbjct: 62 PPPEPMSEERRQWLQEAMSAAFRGQREEVEQMKSCLRVLSQPMPPTAGEAEQAA 115
>gi|112363070 hsp70-interacting protein [Homo sapiens]
Length = 359
Score = 32.7 bits (73), Expect = 0.064
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 30 PPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSA 83
PPP+P EER Q L +A+ R + + + LR L + P AG +A
Sbjct: 62 PPPEPMSEERRQWLQEAMSAAFRGQREEVEQMKSCLRVLSQPMPPTAGEAEQAA 115
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 32.7 bits (73), Expect = 0.064
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 4/97 (4%)
Query: 14 AAGVDRGKAGLGLGGRPPPQ--PPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRR 71
AAG+ L GG PPP P + VEQ++RQ E + G
Sbjct: 103 AAGMASALEALEGGGPPPPPALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGP 162
Query: 72 RPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAA 108
PAGG PG PP P G P AA
Sbjct: 163 PAPPAGG--PPPPPGPPPPPGPPPPPGLPPSGVPAAA 197
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.7 bits (73), Expect = 0.064
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 10 SRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLG 69
S G D G G+G+ G P PPR + + D+ +QR+R + G
Sbjct: 125 SAGAVQKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGT------RGG 178
Query: 70 RRRPEPAGGGNVSAKP------GAPP 89
RRP G G + P GAPP
Sbjct: 179 ARRPGVRGQGAAAVGPTGPRPTGAPP 204
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.7 bits (73), Expect = 0.064
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 10 SRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLG 69
S G D G G+G+ G P PPR + + D+ +QR+R + G
Sbjct: 125 SAGAVQKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGT------RGG 178
Query: 70 RRRPEPAGGGNVSAKP------GAPP 89
RRP G G + P GAPP
Sbjct: 179 ARRPGVRGQGAAAVGPTGPRPTGAPP 204
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.7 bits (73), Expect = 0.064
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 10 SRGEAAGVDRGKAGLGLGGRPPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLG 69
S G D G G+G+ G P PPR + + D+ +QR+R + G
Sbjct: 125 SAGAVQKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGT------RGG 178
Query: 70 RRRPEPAGGGNVSAKP------GAPP 89
RRP G G + P GAPP
Sbjct: 179 ARRPGVRGQGAAAVGPTGPRPTGAPP 204
>gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo sapiens]
Length = 646
Score = 32.7 bits (73), Expect = 0.064
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
Query: 2 EWGPGSDWSRGEAAGVDRGKAGL------------GLGGRPPPQPPREER--AQQLLDAV 47
E G + ++GEAAG+ G G+ G PPP PP EE A LL
Sbjct: 563 EGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGGA 622
Query: 48 EQRQ 51
QRQ
Sbjct: 623 LQRQ 626
>gi|66730481 neuregulin 3 [Homo sapiens]
Length = 696
Score = 32.3 bits (72), Expect = 0.084
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 73 PEPAGGGNVSAKPGAPPQPAVSARGGFPKDAGDGAAEP 110
P A SA+ G A +A GG P G+GAAEP
Sbjct: 11 PGAASAAAASAEEGTAAAAAAAAAGGGPDGGGEGAAEP 48
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 32.0 bits (71), Expect = 0.11
Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 42/119 (35%)
Query: 4 GPGSDWSRGEAAGVDRGKAGL-----GLGGRPPP------QPPREERAQQLLDAVEQRQR 52
G +++ RG +G+ GL G+ GRP P Q PR ER
Sbjct: 102 GGNTNFGRGRKG--QKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGP----------- 148
Query: 53 QLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFPKDAG-DGAAEP 110
+ RP P G + +PG P QP G P G DG + P
Sbjct: 149 -----------------KGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRP 190
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 32.0 bits (71), Expect = 0.11
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 13 EAAGVDRGKAGLGLGGRPP------PQPPREERAQQLLDAVEQR-QRQLLDTIAACEEML 65
EAA + + GG PP PQPPRE + + D+ Q +L ++ +
Sbjct: 289 EAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDSPRTAPQTPVLQKTSS--SIT 346
Query: 66 RQLGRRRPEPAGGG-------NVSAKPGAPPQPA 92
Q R +PEP G K APP+PA
Sbjct: 347 LQAARVQPEPRAPGLGVLSPSGEERKRPAPPRPA 380
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 32.0 bits (71), Expect = 0.11
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 13 EAAGVDRGKAGLGLGGRPP------PQPPREERAQQLLDAVEQR-QRQLLDTIAACEEML 65
EAA + + GG PP PQPPRE + + D+ Q +L ++ +
Sbjct: 289 EAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDSPRTAPQTPVLQKTSS--SIT 346
Query: 66 RQLGRRRPEPAGGG-------NVSAKPGAPPQPA 92
Q R +PEP G K APP+PA
Sbjct: 347 LQAARVQPEPRAPGLGVLSPSGEERKRPAPPRPA 380
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 32.0 bits (71), Expect = 0.11
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 13 EAAGVDRGKAGLGLGGRPP------PQPPREERAQQLLDAVEQR-QRQLLDTIAACEEML 65
EAA + + GG PP PQPPRE + + D+ Q +L ++ +
Sbjct: 289 EAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDSPRTAPQTPVLQKTSS--SIT 346
Query: 66 RQLGRRRPEPAGGG-------NVSAKPGAPPQPA 92
Q R +PEP G K APP+PA
Sbjct: 347 LQAARVQPEPRAPGLGVLSPSGEERKRPAPPRPA 380
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 32.0 bits (71), Expect = 0.11
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 13 EAAGVDRGKAGLGLGGRPP------PQPPREERAQQLLDAVEQR-QRQLLDTIAACEEML 65
EAA + + GG PP PQPPRE + + D+ Q +L ++ +
Sbjct: 289 EAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDSPRTAPQTPVLQKTSS--SIT 346
Query: 66 RQLGRRRPEPAGGG-------NVSAKPGAPPQPA 92
Q R +PEP G K APP+PA
Sbjct: 347 LQAARVQPEPRAPGLGVLSPSGEERKRPAPPRPA 380
>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 327
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 30 PPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEML--RQLGRRRPEPAGGGNVSAKPGA 87
P PQPP + L D +R DT+A +L +LG + P G+ S
Sbjct: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 222
Query: 88 PPQPAVSARGGFPKDAGDGAAEP 110
P P + G F + G+ +P
Sbjct: 223 PTFPLLRKSGQFRDGSQGGSCKP 245
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 31.6 bits (70), Expect = 0.14
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 15/106 (14%)
Query: 5 PGSDWSRGEAAGVDRGKAGLGLGGR-----PPPQPPREERAQQLLDAV----------EQ 49
PG+ W G + L +GG P P PPR ER + A +
Sbjct: 32 PGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRE 91
Query: 50 RQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSA 95
R+R D A R GR P A + +A P A P+ A A
Sbjct: 92 RRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPA 137
>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
sapiens]
Length = 264
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 30 PPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEML--RQLGRRRPEPAGGGNVSAKPGA 87
P PQPP + L D +R DT+A +L +LG + P G+ S
Sbjct: 100 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 159
Query: 88 PPQPAVSARGGFPKDAGDGAAEP 110
P P + G F + G+ +P
Sbjct: 160 PTFPLLRKSGQFRDGSQGGSCKP 182
>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
sapiens]
Length = 315
Score = 31.6 bits (70), Expect = 0.14
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 15/106 (14%)
Query: 5 PGSDWSRGEAAGVDRGKAGLGLGGR-----PPPQPPREERAQQLLDAV----------EQ 49
PG+ W G + L +GG P P PPR ER + A +
Sbjct: 32 PGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRE 91
Query: 50 RQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSA 95
R+R D A R GR P A + +A P A P+ A A
Sbjct: 92 RRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPA 137
>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
sapiens]
Length = 264
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 30 PPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEML--RQLGRRRPEPAGGGNVSAKPGA 87
P PQPP + L D +R DT+A +L +LG + P G+ S
Sbjct: 100 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 159
Query: 88 PPQPAVSARGGFPKDAGDGAAEP 110
P P + G F + G+ +P
Sbjct: 160 PTFPLLRKSGQFRDGSQGGSCKP 182
>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
sapiens]
Length = 315
Score = 31.6 bits (70), Expect = 0.14
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 15/106 (14%)
Query: 5 PGSDWSRGEAAGVDRGKAGLGLGGR-----PPPQPPREERAQQLLDAV----------EQ 49
PG+ W G + L +GG P P PPR ER + A +
Sbjct: 32 PGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRE 91
Query: 50 RQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSA 95
R+R D A R GR P A + +A P A P+ A A
Sbjct: 92 RRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPA 137
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 41 QQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGAPPQPAVSARGGFP 100
+ L A + LL + ACEE+L+++ A G+ P APP P + G F
Sbjct: 411 RSLQQAQSVTSQDLLTAVDACEELLQEIDITPFLLALCGHTWGLPHAPPSPGPLSPGPFS 470
Query: 101 KDAGDGA 107
+GA
Sbjct: 471 SSMEEGA 477
>gi|169790811 SHC (Src homology 2 domain containing) transforming
protein 2 [Homo sapiens]
Length = 582
Score = 31.6 bits (70), Expect = 0.14
Identities = 34/90 (37%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 25 GLGGRPPPQPPR--EERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVS 82
G GGR PP PP E A A+ R Q AA L GR PA
Sbjct: 4 GPGGRAPPAPPAPPEPEAPTTFCALLPRMPQW--KFAAPGGFL---GRG---PAAARAAG 55
Query: 83 AKPGAPPQPAVSARGGFPKDAGD--GAAEP 110
A GA PQP + GG P A GA EP
Sbjct: 56 ASGGADPQPEPAGPGGVPALAAAVLGACEP 85
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 28 GRPPPQPPREERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSAKPGA 87
G PP Q PR R ++ + E AAC + RR P GG S PG
Sbjct: 113 GEPPQQQPRRRRREKEPEE-EPAGAAARAADAACNGLPGSDSRRAPGKGGGSKGS--PGQ 169
Query: 88 -PPQPAVSARG 97
PP PA +A G
Sbjct: 170 RPPVPAAAAAG 180
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 31.2 bits (69), Expect = 0.19
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 17/78 (21%)
Query: 37 EERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPE-----------------PAGGG 79
+E QQL +EQ+Q+QL E +LG ++ E PA GG
Sbjct: 362 QEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAGG 421
Query: 80 NVSAKPGAPPQPAVSARG 97
+A PGAP V+ G
Sbjct: 422 GGAAVPGAPAAVVVAPPG 439
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 31.2 bits (69), Expect = 0.19
Identities = 28/92 (30%), Positives = 30/92 (32%), Gaps = 27/92 (29%)
Query: 10 SRGEAAGVDRGKAGLGLGGRPPPQP-PREERAQQLLDAVEQRQRQLLDTIAACEEMLRQL 68
S AG RG A +G G +PPP P PR ER R L
Sbjct: 37 SLDSGAGERRGGAAVGGGEQPPPAPAPRRER--------------------------RDL 70
Query: 69 GRRRPEPAGGGNVSAKPGAPPQPAVSARGGFP 100
GGG G P ARGG P
Sbjct: 71 PAEPAAARGGGGGGGGGGGGRGPQARARGGGP 102
>gi|239757038 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 65 LRQLGRRRPEPAGGGNVS-AKPGAPP---QPAVSARGGFPKD 102
LR+ GR RP P G S A+PG P +PA ++R G P++
Sbjct: 56 LRRPGRERPPPTRRGQTSRAQPGGNPSAREPASNSRRGQPRE 97
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,579,249
Number of Sequences: 37866
Number of extensions: 372233
Number of successful extensions: 3062
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 2599
Number of HSP's gapped (non-prelim): 674
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.