CBX3 12129

Name: CBX3	Sequence: fasta or formatted (183aa)		NCBI GI: 20544151
Description: chromobox homolog 3		Referenced in: Centromere Proteins Nonhistone Chromosomal Proteins
Other entries for this name: alt mRNA [183aa] chromobox homolog 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 14 2 C cysteine 1.6 3 1 D aspartate 8.7 16 2 E glutamate 12.0 22 2 F phenylalanine 3.8 7 1 G glycine 5.5 10 1 H histidine 0.5 1 1 I isoleucine 2.7 5 2 K lysine 13.7 25 3 L leucine 7.1 13 1 M methionine 2.7 5 1 N asparagine 3.8 7 1 P proline 3.8 7 1 Q glutamine 2.7 5 1 R arginine 4.4 8 2 S serine 7.1 13 2 T threonine 3.8 7 2 V valine 4.9 9 2 W tryptophan 2.2 4 1 Y tyrosine 1.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromobox homolog 3 CBX3 1.000 chromobox homolog 3 CBX1 0.664 heterochromatin protein 1-beta CBX1 0.664 heterochromatin protein 1-beta CBX5 0.583 heterochromatin protein 1-alpha CBX5 0.583 heterochromatin protein 1-alpha CBX5 0.583 heterochromatin protein 1-alpha LOC100292569 0.330 PREDICTED: similar to Chromobox homolog 3 (Drosophi... LOC100289943 0.330 PREDICTED: hypothetical protein XP_002347334 LOC100288472 0.330 PREDICTED: hypothetical protein XP_002343183 MPHOSPH8 0.109 M-phase phosphoprotein 8 CBX2 0.109 chromobox homolog 2 isoform 1 CDYL 0.103 chromodomain protein, Y chromosome-like isoform a [... CBX4 0.103 chromobox homolog 4 CBX2 0.101 chromobox homolog 2 isoform 2 CBX8 0.101 chromobox homolog 8 CBX7 0.092 chromobox homolog 7 CBX6 0.089 chromobox homolog 6 CDY1 0.086 Y chromosome chromodomain protein 1, telomeric isofor... CDY1 0.086 Y chromosome chromodomain protein 1, telomeric isofo... CDY1B 0.086 chromodomain protein, Y-linked, 1B isoform b CDY1B 0.086 chromodomain protein, Y-linked, 1B isoform a CDY2B 0.086 Y chromosome chromodomain protein 2B CDY2A 0.086 Y chromosome chromodomain protein 2A CDYL2 0.075 chromodomain protein, Y-like 2 SUV39H2 0.072 suppressor of variegation 3-9 homolog 2 SUV39H1 0.069 suppressor of variegation 3-9 homolog 1 CHD5 0.037 chromodomain helicase DNA binding protein 5 CHD1 0.037 chromodomain helicase DNA binding protein 1 CHD4 0.037 chromodomain helicase DNA binding protein 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.