Guide to the Human Genome
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Name: LOC100132214 Sequence: fasta or formatted (731aa) NCBI GI: 239743309
Description:

PREDICTED: similar to calcium-promoted Ras inactivator isoform 2

Referenced in:

Ras

Other entries for this name:
alt prot [757aa] PREDICTED: similar to calcium-promoted Ras inactivator isoform 2
alt mRNA [731aa] PREDICTED: similar to calcium-promoted Ras inactivator isoform 1
alt prot [757aa] PREDICTED: similar to calcium-promoted Ras inactivator isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         50           2
 C cysteine            2.2         16           2
 D aspartate           5.1         37           2
 E glutamate           7.9         58           2
 F phenylalanine       3.7         27           2
 G glycine             6.0         44           2
 H histidine           2.9         21           1
 I isoleucine          2.6         19           2
 K lysine              5.7         42           2
 L leucine            12.7         93           4
 M methionine          1.4         10           1
 N asparagine          2.5         18           2
 P proline             5.1         37           2
 Q glutamine           4.9         36           2
 R arginine            7.4         54           2
 S serine              7.7         56           3
 T threonine           5.2         38           2
 V valine              7.3         53           2
 W tryptophan          1.5         11           1
 Y tyrosine            1.5         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to calcium-promoted Ras inactiva... 
LOC100132214          1.000   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.995   RAS p21 protein activator 4 isoform 1 
LOC100132214          0.923   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.923   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.917   RAS p21 protein activator 4 isoform 2 
RASAL1                0.413   RAS protein activator like 1 
RASA2                 0.186   RAS p21 protein activator 2 
RASA3                 0.179   RAS p21 protein activator 3 
RASAL2                0.074   RAS protein activator like 2 isoform 2 
RASAL2                0.074   RAS protein activator like 2 isoform 1 
DAB2IP                0.064   disabled homolog 2 interacting protein isoform 2 [Ho...
DAB2IP                0.064   disabled homolog 2 interacting protein isoform 1 [Ho...
SYNGAP1               0.062   synaptic Ras GTPase activating protein 1 
RASA1                 0.055   RAS p21 protein activator 1 isoform 1 
RASA1                 0.055   RAS p21 protein activator 1 isoform 2 
RASAL3                0.043   RAS protein activator like 3 
PRKCB                 0.041   protein kinase C, beta isoform 1 
PRKCB                 0.041   protein kinase C, beta isoform 2 
PRKCG                 0.039   protein kinase C, gamma 
PRKCA                 0.037   protein kinase C, alpha 
NF1                   0.036   neurofibromin isoform 2 
PCLO                  0.035   piccolo isoform 2 
PCLO                  0.035   piccolo isoform 1 
MCTP1                 0.033   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.033   multiple C2 domains, transmembrane 1 isoform L [Hom...
SYT7                  0.031   synaptotagmin VII 
NF1                   0.031   neurofibromin isoform 1 
DOC2A                 0.027   double C2-like domains, alpha 
SYT17                 0.027   B/K protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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