Guide to the Human Genome
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Name: ZNF253 Sequence: fasta or formatted (499aa) NCBI GI: 83320068
Description:

zinc finger protein 253

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         14           1
 C cysteine            5.8         29           1
 D aspartate           2.2         11           1
 E glutamate           8.2         41           2
 F phenylalanine       4.2         21           1
 G glycine             6.4         32           2
 H histidine           7.2         36           1
 I isoleucine          5.0         25           2
 K lysine             13.0         65           2
 L leucine             6.6         33           2
 M methionine          1.2          6           1
 N asparagine          4.4         22           1
 P proline             4.2         21           2
 Q glutamine           2.4         12           1
 R arginine            4.4         22           2
 S serine              5.8         29           2
 T threonine           8.8         44           3
 V valine              3.0         15           2
 W tryptophan          0.8          4           1
 Y tyrosine            3.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 253 
ZNF66                 0.726   PREDICTED: zinc finger protein 66 
ZNF66                 0.726   PREDICTED: zinc finger protein 66 
ZNF66                 0.726   PREDICTED: zinc finger protein 66 
ZNF737                0.725   zinc finger protein 737 
ZNF737                0.725   PREDICTED: zinc finger protein 737 
ZNF737                0.725   PREDICTED: zinc finger protein 737 
ZNF737                0.725   PREDICTED: zinc finger protein 737 
ZNF626                0.706   zinc finger protein 626 isoform 1 
ZNF93                 0.693   zinc finger protein 93 
ZNF85                 0.692   zinc finger protein 85 
ZNF708                0.672   zinc finger protein 708 
ZNF98                 0.661   zinc finger protein 98 
ZNF273                0.658   zinc finger protein 273 
ZNF431                0.656   zinc finger protein 431 
LOC646864             0.655   PREDICTED: similar to hCG36734 
LOC646864             0.655   PREDICTED: similar to hCG36734 
LOC646864             0.655   PREDICTED: similar to hCG36734 
ZNF730                0.654   PREDICTED: zinc finger protein 730 
ZNF730                0.654   PREDICTED: zinc finger protein 730 
ZNF92                 0.653   zinc finger protein 92 isoform 2 
ZNF675                0.651   zinc finger protein 675 
LOC730110             0.651   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.651   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.651   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF429                0.648   zinc finger protein 429 
ZNF257                0.647   zinc finger protein 257 
ZNF430                0.646   zinc finger protein 430 
ZNF726                0.642   PREDICTED: zinc finger protein 726 
ZNF726                0.642   PREDICTED: zinc finger protein 726 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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