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Search of human proteins with 20336239
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20336239 protein phosphatase 1 regulatory inhibitor subunit
8 isoform beta/delta [Homo sapiens]
(209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8... 429 e-120
gi|20336239 protein phosphatase 1 regulatory inhibitor subunit 8... 429 e-120
gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8 ... 265 2e-71
gi|55743112 NAD kinase [Homo sapiens] 33 0.23
gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo ... 32 0.30
gi|29336043 caytaxin [Homo sapiens] 32 0.30
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ... 32 0.39
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 32 0.39
gi|223468693 hypothetical protein LOC100130361 [Homo sapiens] 32 0.51
gi|223468690 hypothetical protein LOC100132994 [Homo sapiens] 32 0.51
gi|44681484 cell division cycle associated 2 [Homo sapiens] 32 0.51
gi|18079216 CASK interacting protein 1 [Homo sapiens] 31 0.66
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s... 31 0.66
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 31 0.86
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 31 0.86
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 31 0.86
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 31 0.86
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 31 0.86
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 31 0.86
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 31 0.86
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 31 0.86
gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens] 31 0.86
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 31 0.86
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 31 0.86
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 30 1.1
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 30 1.1
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 30 1.1
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 30 1.1
gi|47132519 Ras association and pleckstrin homology domains 1 is... 30 1.1
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 30 1.1
>gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8
isoform alpha [Homo sapiens]
Length = 351
Score = 429 bits (1102), Expect = e-120
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVT 60
MGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVT
Sbjct: 143 MGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVT 202
Query: 61 FSEDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGG 120
FSEDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGG
Sbjct: 203 FSEDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGG 262
Query: 121 LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVY 180
LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVY
Sbjct: 263 LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVY 322
Query: 181 NPEAVNEPKKKKYAKEAWPGKKPTPSLLI 209
NPEAVNEPKKKKYAKEAWPGKKPTPSLLI
Sbjct: 323 NPEAVNEPKKKKYAKEAWPGKKPTPSLLI 351
>gi|20336239 protein phosphatase 1 regulatory inhibitor subunit 8
isoform beta/delta [Homo sapiens]
Length = 209
Score = 429 bits (1102), Expect = e-120
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVT 60
MGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVT
Sbjct: 1 MGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVT 60
Query: 61 FSEDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGG 120
FSEDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGG
Sbjct: 61 FSEDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGG 120
Query: 121 LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVY 180
LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVY
Sbjct: 121 LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVY 180
Query: 181 NPEAVNEPKKKKYAKEAWPGKKPTPSLLI 209
NPEAVNEPKKKKYAKEAWPGKKPTPSLLI
Sbjct: 181 NPEAVNEPKKKKYAKEAWPGKKPTPSLLI 209
>gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8
isoform gamma [Homo sapiens]
Length = 127
Score = 265 bits (678), Expect = 2e-71
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 83 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 142
MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT
Sbjct: 1 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 60
Query: 143 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 202
ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK
Sbjct: 61 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 120
Query: 203 PTPSLLI 209
PTPSLLI
Sbjct: 121 PTPSLLI 127
>gi|55743112 NAD kinase [Homo sapiens]
Length = 446
Score = 32.7 bits (73), Expect = 0.23
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 134 SQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKY 193
S P G A G M +PN+ P + +TP+ P +++ P PA + + P+ +
Sbjct: 319 STPTGSTAYAAAAGASMIHPNV-PAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNT 377
Query: 194 AKEAWPGKK 202
A ++ G+K
Sbjct: 378 AWVSFDGRK 386
>gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo
sapiens]
Length = 870
Score = 32.3 bits (72), Expect = 0.30
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 12 LGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDI---QRPKRKRKNSRVTFSEDDEII 68
L LP E + E ++ + +T++ ++++ P + ++S+ ++ I
Sbjct: 273 LTLPNHEVSVQPPGEDQAYYH--LPNITVKPADVEVTITSEPTNETESSQA--QQETPIQ 328
Query: 69 NPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPT 128
PE+V+PS + ++ V P++ + ++ S S R + + G PP
Sbjct: 329 FPEEVEPSATQQEAPIEPPVSPMEHELSISEQQQPVQPSESSREVESSLTQQETPGQPPE 388
Query: 129 HSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLT 162
H E P G H T + + PDV LT
Sbjct: 389 HHEVTVSPPGHHQTHHLDSPSVSVK--PPDVQLT 420
>gi|29336043 caytaxin [Homo sapiens]
Length = 371
Score = 32.3 bits (72), Expect = 0.30
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 11 LLGLPEEETEL-DNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVTFSEDDEIIN 69
LLG P E+T N FN AH KR TL E N+ + + + + + DD IN
Sbjct: 36 LLGSPVEDTSSPPNTLNFNGAHRKR-KTLVAPEINISLDQSEGSLLSDDFLDTPDDLDIN 94
Query: 70 PEDVD 74
+D++
Sbjct: 95 VDDIE 99
>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
Length = 159
Score = 32.0 bits (71), Expect = 0.39
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 95 RVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGI--HGTALIGGL---- 148
R GPG+L L GS R+ + +G P S GS G+ HG A L
Sbjct: 44 RAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTS--GSPEEGVSGHGPAAAASLPRAQ 101
Query: 149 -PMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNP 182
P P P+ A L +P ++ A +PA P
Sbjct: 102 VPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRP 136
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 0.39
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 100 GSLGLEESGSRRMQNFAFSGGLY--------GGLPPTHSEAGSQPHGIHGTALIGGLPMP 151
G LGL G +N AFSGG + G L P +G P G+ LP+P
Sbjct: 33 GGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVP 92
Query: 152 YP 153
P
Sbjct: 93 PP 94
>gi|223468693 hypothetical protein LOC100130361 [Homo sapiens]
Length = 514
Score = 31.6 bits (70), Expect = 0.51
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 75 PSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGS 134
P GRF + PV ++ G LE+S ++MQ+ A+ + AG+
Sbjct: 253 PVPGRFLTSAPRGLTPVAERPAVGE----LEDSPQKKMQSRAWGKVEVRPSCSGAAAAGA 308
Query: 135 QPHGIHGTALIGGLPMPYPNLAPDVDLT-----PVVPSAVNMNPAPNPAVYNPEAVNEP- 188
P G+ + GG +L L P ++ P P PA + P + P
Sbjct: 309 LPQGLSRRKMAGGKK----SLGGASQLALGRGFPACGERLSAAP-PEPATFPPFSGVRPQ 363
Query: 189 ---KKKKYAKEAWPGKKP 203
KK + K + PGKKP
Sbjct: 364 GMSKKPQKPKHSSPGKKP 381
>gi|223468690 hypothetical protein LOC100132994 [Homo sapiens]
Length = 514
Score = 31.6 bits (70), Expect = 0.51
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 75 PSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGS 134
P GRF + PV ++ G LE+S ++MQ+ A+ + AG+
Sbjct: 253 PVPGRFLTSAPRGLTPVAERPAVGE----LEDSPQKKMQSRAWGKVEVRPSCSGAAAAGA 308
Query: 135 QPHGIHGTALIGGLPMPYPNLAPDVDLT-----PVVPSAVNMNPAPNPAVYNPEAVNEP- 188
P G+ + GG +L L P ++ P P PA + P + P
Sbjct: 309 LPQGLSRRKMAGGKK----SLGGASQLALGRGFPACGERLSAAP-PEPATFPPFSGVRPQ 363
Query: 189 ---KKKKYAKEAWPGKKP 203
KK + K + PGKKP
Sbjct: 364 GMSKKPQKPKHSSPGKKP 381
>gi|44681484 cell division cycle associated 2 [Homo sapiens]
Length = 1023
Score = 31.6 bits (70), Expect = 0.51
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 22 DNLTEFNTAHNKRISTL--------TIEEGNLDIQRPKRKRKNSRVTFSEDDEIINPEDV 73
+NL + + H IS L +E N + RK RVTF ED ++PE
Sbjct: 348 NNLYDDDGTHPSLISNLPNCCKEKEAEDEENFEAPAFLNMRKRKRVTFGED---LSPEVF 404
Query: 74 DPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEES 107
D S+ ++ PV KK G SL LE+S
Sbjct: 405 DESLPA-NTPLRKGGTPVCKKDFSGLSSLLLEQS 437
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 31.2 bits (69), Expect = 0.66
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 140 HGTAL-IGGLPMPYPNLAPDVDLTPVVPS-AVNMNPAPNPAVYNPEAVNEPKKKKYAKEA 197
HGT + P P P V +PS + +PAP+PA P A+ +P + A
Sbjct: 1264 HGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGA 1323
Query: 198 WPGKKPTP 205
P K P+P
Sbjct: 1324 SPAKPPSP 1331
>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
sapiens]
Length = 1634
Score = 31.2 bits (69), Expect = 0.66
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 12 LGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDI---QRPKRKRKNSRVTFSEDDEII 68
L LP E + E ++ + +T++ ++++ P + ++S+ ++ I
Sbjct: 273 LTLPNHEVSVQPPGEDQAYYH--LPNITVKPADVEVTITSEPTNETESSQA--QQETPIQ 328
Query: 69 NPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPT 128
PE+V+PS + ++ V P++ + ++ S S R + + G PP
Sbjct: 329 FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPE 388
Query: 129 HSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLT 162
H E P G H T + + PDV LT
Sbjct: 389 HHEVTVSPPGHHQTHHLASPSVSVK--PPDVQLT 420
>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 30.8 bits (68), Expect = 0.86
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 90 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 141
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 1112 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1162
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 30.8 bits (68), Expect = 0.86
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 90 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 141
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 1112 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1162
>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2028
Score = 30.8 bits (68), Expect = 0.86
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 90 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 141
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 1080 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1130
>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1934
Score = 30.8 bits (68), Expect = 0.86
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 90 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 141
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 986 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1036
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 30.8 bits (68), Expect = 0.86
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 12 LGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDI---QRPKRKRKNSRVTFSEDDEII 68
L LP E + E ++ + +T++ ++++ P + ++S+ ++ I
Sbjct: 273 LTLPNHEVSVQPPGEDQAYYH--LPNITVKPADVEVTITSEPTNETESSQA--QQETPIQ 328
Query: 69 NPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPT 128
PE+V+PS + ++ V P++ + ++ S S R + + G PP
Sbjct: 329 FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPE 388
Query: 129 HSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLT 162
H E P G H T + + PDV LT
Sbjct: 389 HHEVTVSPPGHHQTHHLASPSVSVK--PPDVQLT 420
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 30.8 bits (68), Expect = 0.86
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 12 LGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDI---QRPKRKRKNSRVTFSEDDEII 68
L LP E + E ++ + +T++ ++++ P + ++S+ ++ I
Sbjct: 273 LTLPNHEVSVQPPGEDQAYYH--LPNITVKPADVEVTITSEPTNETESSQA--QQETPIQ 328
Query: 69 NPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPT 128
PE+V+PS + ++ V P++ + ++ S S R + + G PP
Sbjct: 329 FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPE 388
Query: 129 HSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLT 162
H E P G H T + + PDV LT
Sbjct: 389 HHEVTVSPPGHHQTHHLASPSVSVK--PPDVQLT 420
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 30.8 bits (68), Expect = 0.86
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 151 PYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEP 188
P PN P V PV + + + PAP P + P+ + P
Sbjct: 227 PRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRP 264
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 30.8 bits (68), Expect = 0.86
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 151 PYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEP 188
P PN P V PV + + + PAP P + P+ + P
Sbjct: 226 PRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRP 263
>gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens]
Length = 800
Score = 30.8 bits (68), Expect = 0.86
Identities = 21/75 (28%), Positives = 27/75 (36%), Gaps = 13/75 (17%)
Query: 131 EAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKK 190
+ + PHG H L G P P AP + P+ Y P EP K
Sbjct: 168 QPSNPPHGAH--TLNSG---PQPGTAPATQHSQAGPATGQ--------AYGPHTYTEPAK 214
Query: 191 KKYAKEAWPGKKPTP 205
K ++ W KP P
Sbjct: 215 PKKGQQLWNRMKPAP 229
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 30.8 bits (68), Expect = 0.86
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 12 LGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDI---QRPKRKRKNSRVTFSEDDEII 68
L LP E + E ++ + +T++ ++++ P + ++S+ ++ I
Sbjct: 273 LTLPNHEVSVQPPGEDQAYYH--LPNITVKPADVEVTITSEPTNETESSQA--QQETPIQ 328
Query: 69 NPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPT 128
PE+V+PS + ++ V P++ + ++ S S R + + G PP
Sbjct: 329 FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPE 388
Query: 129 HSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLT 162
H E P G H T + + PDV LT
Sbjct: 389 HHEVTVSPPGHHQTHHLASPSVSVK--PPDVQLT 420
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 30.8 bits (68), Expect = 0.86
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 12 LGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDI---QRPKRKRKNSRVTFSEDDEII 68
L LP E + E ++ + +T++ ++++ P + ++S+ ++ I
Sbjct: 273 LTLPNHEVSVQPPGEDQAYYH--LPNITVKPADVEVTITSEPTNETESSQA--QQETPIQ 328
Query: 69 NPEDVDPSVGRFRNMVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPT 128
PE+V+PS + ++ V P++ + ++ S S R + + G PP
Sbjct: 329 FPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPE 388
Query: 129 HSEAGSQPHGIHGTALIGGLPMPYPNLAPDVDLT 162
H E P G H T + + PDV LT
Sbjct: 389 HHEVTVSPPGHHQTHHLASPSVSVK--PPDVQLT 420
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 30.4 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 149 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 194
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 195 KEAWP----------------GKKPTPS 206
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 30.4 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 149 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 194
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 195 KEAWP----------------GKKPTPS 206
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 30.4 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 149 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 194
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 195 KEAWP----------------GKKPTPS 206
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 30.4 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 149 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 194
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 195 KEAWP----------------GKKPTPS 206
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 30.4 bits (67), Expect = 1.1
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 148 LPMPYPNLAP-----DVDLTPVVPSAVNMNPAPNP--AVYNPEAVNEPKKKKYAKEAWPG 200
+P+P P+ P + P PS V P P P A P+ P KK + G
Sbjct: 909 IPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGG 968
Query: 201 KKPTPS 206
KKP P+
Sbjct: 969 KKPPPT 974
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 103 GLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLA------ 156
G E R+Q++ G+ P E G + +A + G+PMP P L
Sbjct: 45 GNREELVERLQSYTRQTGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQP 104
Query: 157 --------PDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKE 196
P + L + N+ P P V P A++E ++ K A++
Sbjct: 105 PPPPPPPPPGLGLGFPMAHPPNLGPPPPLRVGEPVALSEEERLKLAQQ 152
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,312,330
Number of Sequences: 37866
Number of extensions: 585830
Number of successful extensions: 1680
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1632
Number of HSP's gapped (non-prelim): 123
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.