Guide to the Human Genome
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Search of human proteins with 20127609

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
         (424 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189217888 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...   866   0.0  
gi|189217886 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...   866   0.0  
gi|20127609 carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...   866   0.0  
gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]               390   e-109
gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]            216   4e-56
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]            181   9e-46
gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]           178   7e-45
gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]              161   9e-40
gi|4758540 HNK-1 sulfotransferase [Homo sapiens]                      152   4e-37
gi|156416026 zinc finger protein 219 [Homo sapiens]                    35   0.17 
gi|156415998 zinc finger protein 219 [Homo sapiens]                    35   0.17 
gi|156415996 zinc finger protein 219 [Homo sapiens]                    35   0.17 
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch...    34   0.29 
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]        32   0.84 
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]        32   0.84 
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             32   0.84 
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            32   1.1  
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]        31   1.9  
gi|169160905 PREDICTED: similar to nuclear transport factor 2 [H...    31   1.9  
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ...    31   1.9  
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       31   1.9  
gi|238859651 pleckstrin homology domain containing family A memb...    31   2.4  
gi|169163761 PREDICTED: hypothetical protein isoform 1 [Homo sap...    31   2.4  
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]            31   2.4  
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom...    31   2.4  
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|105990541 ATP-binding cassette, sub-family A member 4 [Homo s...    30   3.2  
gi|41406050 docking protein 2 [Homo sapiens]                           30   3.2  

>gi|189217888 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score =  866 bits (2238), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
           MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP
Sbjct: 1   MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60

Query: 61  GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
           GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP
Sbjct: 61  GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120

Query: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
           AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH
Sbjct: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180

Query: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
           VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD
Sbjct: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240

Query: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
           RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL
Sbjct: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300

Query: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
           RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS
Sbjct: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360

Query: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
           LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
Sbjct: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420

Query: 421 ADLY 424
           ADLY
Sbjct: 421 ADLY 424


>gi|189217886 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score =  866 bits (2238), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
           MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP
Sbjct: 1   MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60

Query: 61  GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
           GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP
Sbjct: 61  GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120

Query: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
           AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH
Sbjct: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180

Query: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
           VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD
Sbjct: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240

Query: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
           RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL
Sbjct: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300

Query: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
           RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS
Sbjct: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360

Query: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
           LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
Sbjct: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420

Query: 421 ADLY 424
           ADLY
Sbjct: 421 ADLY 424


>gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score =  866 bits (2238), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
           MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP
Sbjct: 1   MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60

Query: 61  GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
           GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP
Sbjct: 61  GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120

Query: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
           AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH
Sbjct: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180

Query: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
           VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD
Sbjct: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240

Query: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
           RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL
Sbjct: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300

Query: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
           RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS
Sbjct: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360

Query: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
           LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
Sbjct: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420

Query: 421 ADLY 424
           ADLY
Sbjct: 421 ADLY 424


>gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]
          Length = 443

 Score =  390 bits (1003), Expect = e-109
 Identities = 213/436 (48%), Positives = 276/436 (63%), Gaps = 34/436 (7%)

Query: 13  MFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEP- 71
           +F S+L+FG AGLLLF+ LQ   E   +Q  G    +  R+        G        P 
Sbjct: 13  VFLSVLIFGVAGLLLFMYLQVWIE---EQHTG---RVEKRREQKVTSGWGPVKYLRPVPR 66

Query: 72  ---TERVTRDLSSGAPRGRNLPAPDQPQPPL----QRGTRLRLRQRRRR----------- 113
              TE++   +++  P+        + +  L    +R TRL  +    +           
Sbjct: 67  IMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTG 126

Query: 114 ----LLIKKMPAAATIPANSSDAPF---IRPGPGTL--DGRWVSLHRSQQERKRVMQEAC 164
                LI+K   A T+    S+  +   I P   +L  D +W     +Q++R+  +QE C
Sbjct: 127 SPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQEFC 186

Query: 165 AKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQH 224
            KY   S  ++     VSRI+VED+H++LYCEVPKAGCSNWKR+LMVL GLASS  +I H
Sbjct: 187 KKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISH 246

Query: 225 NTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFG 284
           N VHYG  LK+LD+FD +GI  RL+TYTK +FVR+P ERLVSAFRDKFEHPNSYYHPVFG
Sbjct: 247 NAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFG 306

Query: 285 KAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDF 344
           KAI+ +YR NA  EAL  GSGV+F EF+ YLLD HRPVGMDIHW+ VS+LC PCLI+YDF
Sbjct: 307 KAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDF 366

Query: 345 VGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTY 404
           VGKFE++E+DAN+FL +I AP+ L FP FKDRHS + RT A++  QY   L+  +RQ  Y
Sbjct: 367 VGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIY 426

Query: 405 DFYYMDYLMFNYSKPF 420
           DFYY+DYLMFNY+ PF
Sbjct: 427 DFYYLDYLMFNYTTPF 442


>gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]
          Length = 352

 Score =  216 bits (549), Expect = 4e-56
 Identities = 114/272 (41%), Positives = 160/272 (58%), Gaps = 9/272 (3%)

Query: 153 QQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVL 212
           Q  R +V     A    S  RR +TP  +  + V++ H ++YC VPK  C+NWKR++MVL
Sbjct: 79  QMRRDQVTDTCRANSATSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVL 138

Query: 213 AGLA--SSTADIQHNTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRD 270
            G    S   +I  N  H  + LK L+ +    I HRL +Y K LFVREPFERLVSA+R+
Sbjct: 139 TGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRN 198

Query: 271 KF-EHPNSYYHPVFGKAILARYRANASREALRTGSGVRFPEFVQYLLDVH--RPVGMDIH 327
           KF +  N  +H  +G  I+ R R NA++EALR G  V+F EFV YL+D H  R    + H
Sbjct: 199 KFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEH 258

Query: 328 WDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARI 387
           W  V  LC PC I YD VGK+E++E+D+N+ L L      L FP +    ++  RTT  +
Sbjct: 259 WQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTY----AKSTRTTDEM 314

Query: 388 AHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
             ++F  +S+  + + Y+ Y +D+LMFNYS P
Sbjct: 315 TTEFFQNISSEHQTQLYEVYKLDFLMFNYSVP 346


>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
          Length = 414

 Score =  181 bits (460), Expect = 9e-46
 Identities = 115/295 (38%), Positives = 154/295 (52%), Gaps = 31/295 (10%)

Query: 151 RSQQERKRVMQEACAKYRAS--SSRRA---VTPRHVSRIFVEDRHRVLYCEVPKAGCSNW 205
           R Q ER+ V++  CA    +  +  RA   +    +S + V+DRH  +YC VPK  C+NW
Sbjct: 119 RQQAERRSVLRGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNW 178

Query: 206 KRVLMVLAGLA-------SSTADIQHNTVHYGSALKRLDTFDRQ-GILHR------LSTY 251
           KRV++VL+G              I    VH  SA    + F R+ G L R      L  Y
Sbjct: 179 KRVMIVLSGSLLHRGAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKY 238

Query: 252 TKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANAS-----REALRTGSGV 306
           TK LFVR+PF RL+SAFR KFE  N  ++  F   +L  Y  + S     REA R G  V
Sbjct: 239 TKFLFVRDPFVRLISAFRSKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKV 298

Query: 307 RFPEFVQYLLDVH--RPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRA 364
            F  F+QYLLD H  +    + HW  V RLC PC IDYDFVGK E++++DA   L L++ 
Sbjct: 299 SFANFIQYLLDPHTEKLAPFNEHWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQV 358

Query: 365 PRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
            R L FP      S   RT +     +FA++    RQ+ Y  Y  D+++F Y KP
Sbjct: 359 DRQLRFP-----PSYRNRTASSWEEDWFAKIPLAWRQQLYKLYEADFVLFGYPKP 408


>gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]
          Length = 341

 Score =  178 bits (452), Expect = 7e-45
 Identities = 104/276 (37%), Positives = 150/276 (54%), Gaps = 9/276 (3%)

Query: 148 SLHRSQQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKR 207
           +L +  ++R+ ++  AC+++  S  +R + P  +  + V+D H +LYC VPK  C+NWKR
Sbjct: 65  TLAKVHRQRRDLLNSACSRH--SRRQRLLQPEDLRHVLVDDAHGLLYCYVPKVACTNWKR 122

Query: 208 VLMVLAGLA-SSTADIQHNTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVS 266
           VL+ L+G A      I     H    L  L  F    I  RL  Y   LFVREPFERL S
Sbjct: 123 VLLALSGQARGDPRAISAQEAHAPGRLPSLADFSPAEINRRLRAYLAFLFVREPFERLAS 182

Query: 267 AFRDKFEHP-NSYYHPVFGKAILARYRANASREALRTGSGVRFPEFVQYLLD--VHRPVG 323
           A+R+K   P ++ +   +G  I+ R R  A  +A   G  VRF EF+ YLLD    R   
Sbjct: 183 AYRNKLARPYSAAFQRRYGARIVQRLRPRALPDARARGHDVRFAEFLAYLLDPRTRREEP 242

Query: 324 MDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEART 383
            + HW+    LC PC + YD VGKFE++ +DA F L L  A  +L+FP       + A  
Sbjct: 243 FNEHWERAHALCHPCRLRYDVVGKFETLAEDAAFVLGLAGA-SDLSFP--GPPRPRGAAA 299

Query: 384 TARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
           +  +A + F  +S   ++R +D Y MD+L+FNYS P
Sbjct: 300 SRDLAARLFRDISPFYQRRLFDLYKMDFLLFNYSAP 335


>gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]
          Length = 376

 Score =  161 bits (408), Expect = 9e-40
 Identities = 108/291 (37%), Positives = 143/291 (49%), Gaps = 19/291 (6%)

Query: 136 RPGPGTLDGRWVSLHRSQQERKRVMQEACAK-------YRASSSRRAVTPRHVSRIFVED 188
           +PG  +L      L   Q  R R ++  C +       +     +R    RH   I V D
Sbjct: 89  KPGGLSLRAGDADLQVRQDVRNRTLRAVCGQPGMPRDPWDLPVGQRRTLLRH---ILVSD 145

Query: 189 RHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFDRQGILHRL 248
           R+R LYC VPK  CSNWKRV+ VLAG+  S  D++    H  S L  L     + I +RL
Sbjct: 146 RYRFLYCYVPKVACSNWKRVMKVLAGVLDSV-DVRLKMDHR-SDLVFLADLRPEEIRYRL 203

Query: 249 STYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREALRTGSGVRF 308
             Y K LFVREP ERL+SA+R+KF     Y    +G  I+ RYRA A       G  V F
Sbjct: 204 QHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSP--AGDDVTF 260

Query: 309 PEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNL 368
           PEF++YL+D   P  M+ HW  V  LC PC + YDFVG +E +E DAN  L  +RAP ++
Sbjct: 261 PEFLRYLVD-EDPERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLEWVRAPPHV 319

Query: 369 TFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
            FP    R +     +    H +         Q     Y +D+ +F Y  P
Sbjct: 320 RFPA---RQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367


>gi|4758540 HNK-1 sulfotransferase [Homo sapiens]
          Length = 356

 Score =  152 bits (385), Expect = 4e-37
 Identities = 103/318 (32%), Positives = 154/318 (48%), Gaps = 20/318 (6%)

Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASS-S 172
           L +  MP    +P        ++P    L    +       ER  +++  C      + S
Sbjct: 42  LFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVYMERLELIRNVCRDDALKNLS 101

Query: 173 RRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTV--HYG 230
              V+   + RIFV D+H++L+C+ PK G + WK+VL+VL G  SS  +I  N V  H  
Sbjct: 102 HTPVSKFVLDRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEK 161

Query: 231 SALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHP---NSYYHPVFGKAI 287
           + L RL +F    I  RL TY K   VR+PFERL+SAF+DKF H      +Y       I
Sbjct: 162 NGLPRLSSFSDAEIQKRLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGI 221

Query: 288 LARYRANASREALRTGSGVRFPEFVQYLLDV-HRPVGMD-----IHWDHVSRLCSPCLID 341
           + +YR N +        G++F +FV+YL D  HR + +      IHW     LC+PC I 
Sbjct: 222 IRKYRRNRTET-----RGIQFEDFVRYLGDPNHRWLDLQFGDHIIHWVTYVELCAPCEIM 276

Query: 342 YDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQ 401
           Y  +G  E++EDDA + L        +++P      +   RT  ++ H YF  +S    +
Sbjct: 277 YSVIGHHETLEDDAPYILKEAGIDHLVSYPTIPPGITVYNRT--KVEH-YFLGISKRDIR 333

Query: 402 RTYDFYYMDYLMFNYSKP 419
           R Y  +  D+ +F Y KP
Sbjct: 334 RLYARFEGDFKLFGYQKP 351


>gi|156416026 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)

Query: 54  PHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRR 113
           PH D    G+Q G LK   +R  R+  SGA  G     P +P PP QRG+  +   +   
Sbjct: 529 PHCDY--AGTQSGSLKYHLQRHHREQRSGAGPG----PPPEPPPPSQRGSAPQSGAKP-- 580

Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGT 141
                 PA     A+S   P    GPG+
Sbjct: 581 ---SPQPATWVEGASSPRPPSSGAGPGS 605


>gi|156415998 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)

Query: 54  PHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRR 113
           PH D    G+Q G LK   +R  R+  SGA  G     P +P PP QRG+  +   +   
Sbjct: 529 PHCDY--AGTQSGSLKYHLQRHHREQRSGAGPG----PPPEPPPPSQRGSAPQSGAKP-- 580

Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGT 141
                 PA     A+S   P    GPG+
Sbjct: 581 ---SPQPATWVEGASSPRPPSSGAGPGS 605


>gi|156415996 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)

Query: 54  PHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRR 113
           PH D    G+Q G LK   +R  R+  SGA  G     P +P PP QRG+  +   +   
Sbjct: 529 PHCDY--AGTQSGSLKYHLQRHHREQRSGAGPG----PPPEPPPPSQRGSAPQSGAKP-- 580

Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGT 141
                 PA     A+S   P    GPG+
Sbjct: 581 ---SPQPATWVEGASSPRPPSSGAGPGS 605


>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
           family member 2 [Homo sapiens]
          Length = 1122

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 35  TELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQ 94
           T L P   P    NI+    H   P   S D +LK P+ER    L   AP      A D 
Sbjct: 524 TPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPS----ADDN 579

Query: 95  PQPPLQRGTRLRLRQRRRRLLIKK-MPAAATIP 126
            + P +    L+ R   +R++I + +P+ +++P
Sbjct: 580 IKTPAE---HLQFRFHPQRMIISRDLPSVSSLP 609



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 35  TELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGR--NLPAP 92
           T L P   P    NI+    H   P   S D +LK P+ER    L   AP     N+  P
Sbjct: 398 TPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTP 457

Query: 93  DQ----PQPP 98
            +    P PP
Sbjct: 458 AERLRGPLPP 467



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 6/151 (3%)

Query: 35   TELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGR--NLPAP 92
            T L P   P    NI+        P   S D +LK P+ER    L   AP     N+  P
Sbjct: 909  TPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTP 968

Query: 93   -DQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFIR---PGPGTLDGRWVS 148
             ++ + PL       L+    R L    P+A T   ++   P  R   P P + D    +
Sbjct: 969  AERLRGPLPPSADDNLKTPSERQLTPLPPSAPTSADDNIKTPAERLRGPLPPSADDNLKT 1028

Query: 149  LHRSQQERKRVMQEACAKYRASSSRRAVTPR 179
               + QE +        + RA+       P+
Sbjct: 1029 PPLATQEAEAEKPRKPKRQRAAEMEPPPEPK 1059


>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
          Length = 1337

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 34  PTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPD 93
           P  + PQQV    +   P   HH+ PP  S +     P+  +    +S +P  R+LP   
Sbjct: 156 PPPVMPQQV---NYQYPPGYSHHNFPPP-SFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211

Query: 94  QPQPPLQRGTRLRLR 108
            P+ P +R +  RL+
Sbjct: 212 LPKAPSERRSPERLK 226


>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
          Length = 1374

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 34  PTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPD 93
           P  + PQQV    +   P   HH+ PP  S +     P+  +    +S +P  R+LP   
Sbjct: 156 PPPVMPQQV---NYQYPPGYSHHNFPPP-SFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211

Query: 94  QPQPPLQRGTRLRLR 108
            P+ P +R +  RL+
Sbjct: 212 LPKAPSERRSPERLK 226


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 8/117 (6%)

Query: 59  PPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKK 118
           PPG + + + +  TE      +     G        P PP  +        + R     +
Sbjct: 453 PPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAPSPPAPKSCL-----KHRPAAASE 507

Query: 119 MPAAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRA 175
            PAA+  P  ++++P + PGPG+LD    +  R + ER           RA+  R+A
Sbjct: 508 GPAASP-PLAAAESPPVEPGPGSLDAEAAAPERPKAERAEA--PPAGAERAAPERKA 561


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 17/96 (17%)

Query: 58  LPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLR----------- 106
           L PGGS D D +       R  +  AP  + LP    P PPL  G R R           
Sbjct: 69  LLPGGSADKDQEREPSLAARGTAPPAPPRQCLPT---PCPPLGHGLRPRPPPGTPPPRCP 125

Query: 107 --LRQRRRRLLIKKMPA-AATIPANSSDAPFIRPGP 139
             L    R L     PA A T PA  + A   RPGP
Sbjct: 126 RTLAPGPRGLFPAPPPAPARTGPAGKAAADRGRPGP 161


>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
          Length = 2089

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 3/156 (1%)

Query: 30   SLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNL 89
            S++ P  + P   P ++ +    QP    P   +  G     + +    +   AP  +  
Sbjct: 1482 SVKTPETVVPT-APELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPS 1540

Query: 90   PAPDQP--QPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGRWV 147
             + DQP    P  R TR R  +   +     +P A  +  ++S    + P P +   R  
Sbjct: 1541 TSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRCR 1600

Query: 148  SLHRSQQERKRVMQEACAKYRASSSRRAVTPRHVSR 183
            +   S +  + V+  A   +  +S+ + VTP+  SR
Sbjct: 1601 TNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSR 1636


>gi|169160905 PREDICTED: similar to nuclear transport factor 2 [Homo
           sapiens]
          Length = 340

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 109 QRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGR-WVSLHRSQQERKRVMQEACAKY 167
           Q +R  L   +P  + I    S       GPG   GR W S  RS + R+R     C   
Sbjct: 44  QEQRERLPSSIPLLSCIDQGPS-------GPGGGIGRAWASPSRSLRVRRRFAGAGCVSK 96

Query: 168 RASSSRRA 175
           RAS S+RA
Sbjct: 97  RASVSKRA 104


>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
            subunit [Homo sapiens]
          Length = 2339

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 11/96 (11%)

Query: 84   PRGRNL--PAPDQPQPPLQRGT-----RLRLRQRRRRLLIKKMPAAATIPANSSDAPFIR 136
            PRG +L    PD+P PP Q  +     R   R+ R++  ++K P+   + A+   AP   
Sbjct: 2029 PRGTHLCSTTPDRP-PPSQASSHHHHHRCHRRRDRKQRSLEKGPS---LSADMDGAPSSA 2084

Query: 137  PGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSS 172
             GPG   G   +  R ++ER++    +  + + SSS
Sbjct: 2085 VGPGLPPGEGPTGCRRERERRQERGRSQERRQPSSS 2120


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 31/138 (22%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 16   SILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERV 75
            ++L  G    ++    + P   AP+  P +  +  P +   D  P   Q    ++P+   
Sbjct: 1304 NVLHTGKRWFIICPVAEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLA 1363

Query: 76   TRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFI 135
            ++ L S A       AP  P  P         +           PA +T+P  +S     
Sbjct: 1364 SQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAA-------PATSTMPEPASGTASQ 1416

Query: 136  RPGPGTLDGRWVSLHRSQ 153
              GPGT  G    L  SQ
Sbjct: 1417 AGGPGTPQGLTSELETSQ 1434


>gi|238859651 pleckstrin homology domain containing family A member
           4 isoform 1 [Homo sapiens]
          Length = 779

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 30/174 (17%)

Query: 51  PRQPHHDL--PPGGSQDGDLKEP-----TERVTRDLSSGAPRGRNLPAPDQPQPPLQRGT 103
           PR P  D   PPGG  D DL  P     + RV+R   + +P GR+LP+P           
Sbjct: 533 PRSPETDWGRPPGG--DKDLASPHLGLGSPRVSR---ASSPEGRHLPSPQLGTKAPVARP 587

Query: 104 RLRLRQRRRRLLIKKMPAAATIPANSSDAPFIRP-GPGTLD-GRWVSLHRSQQ--ERKRV 159
           R+  +++  R+   +              PF RP  P  L  GR +S  R Q   E++ V
Sbjct: 588 RMSAQEQLERMRRNQ----------ECGRPFPRPTSPRLLTLGRTLSPARRQPDVEQRPV 637

Query: 160 MQEACAKYRASSSRRAVTPRHVSRIF-VEDRHRVLYCEVPKA---GCSNWKRVL 209
           +  + A+    SS    +PR+ +      + HR     + +A     S W R++
Sbjct: 638 VGHSGAQKWLRSSGSWSSPRNTTPYLPTSEGHRERVLSLSQALATEASQWHRMM 691


>gi|169163761 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 166

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 64  QDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPL 99
           +DG  + P  R  RDLS  A R   LP P  PQP L
Sbjct: 99  RDGGWRSPNRRCIRDLSRAALR---LPQPPPPQPNL 131


>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 26/147 (17%)

Query: 3   LRPGTMRLACM-FSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQP------H 55
           +RP  +   C     +L+ GA   LL++ L D  E+     P       PR P       
Sbjct: 13  VRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLSFSPEAIAPPAPRPPPCRGPLD 72

Query: 56  HDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLL 115
            DL P  S  G   +P       L S A R   + AP    PPL  G +    QR + L 
Sbjct: 73  RDLAPSRS-GGSWPQPCR-----LRSPAARRGEICAPRGGSPPLPEG-QAGTGQRPQGL- 124

Query: 116 IKKMPAAATIPANSSDAPFIRPGPGTL 142
                      A S + P  RP  GTL
Sbjct: 125 -----------AESGEEPLPRPCQGTL 140


>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
           sapiens]
          Length = 1551

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 57  DLPPGGS--QDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRL 114
           D PP GS  QD DL++  +R+ R+L+ G      L A +Q     Q G +  L QR +  
Sbjct: 474 DGPPAGSPGQDSDLRQELDRLHRELAEGR---AGLQAQEQELCRAQ-GQQEELLQRLQEA 529

Query: 115 LIKKMPAAATIPANSSDAPFIRPGPGTLDGRWVSLHR 151
             ++   A+   A SS     R     L+ +  SL R
Sbjct: 530 QEREAATASQTRALSSQLEEARAAQRELEAQVSSLSR 566


>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 69  KEPTERVTRDLSSGAP-RGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATI-- 125
           K P  R   + +   P R R  P   +P+       R   RQRRR+   ++  A  T+  
Sbjct: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR---RQRRRKAGAERAGAGPTLTP 198

Query: 126 --PANSSD--------APFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYR---ASSS 172
             PA S D        AP     P    G+W  L R + ER      +C+  R   AS S
Sbjct: 199 PLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGS 258

Query: 173 RRAVT 177
             A+T
Sbjct: 259 GAAMT 263


>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 69  KEPTERVTRDLSSGAP-RGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATI-- 125
           K P  R   + +   P R R  P   +P+       R   RQRRR+   ++  A  T+  
Sbjct: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR---RQRRRKAGAERAGAGPTLTP 198

Query: 126 --PANSSD--------APFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYR---ASSS 172
             PA S D        AP     P    G+W  L R + ER      +C+  R   AS S
Sbjct: 199 PLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGS 258

Query: 173 RRAVT 177
             A+T
Sbjct: 259 GAAMT 263


>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 69  KEPTERVTRDLSSGAP-RGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATI-- 125
           K P  R   + +   P R R  P   +P+       R   RQRRR+   ++  A  T+  
Sbjct: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR---RQRRRKAGAERAGAGPTLTP 198

Query: 126 --PANSSD--------APFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYR---ASSS 172
             PA S D        AP     P    G+W  L R + ER      +C+  R   AS S
Sbjct: 199 PLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGS 258

Query: 173 RRAVT 177
             A+T
Sbjct: 259 GAAMT 263


>gi|105990541 ATP-binding cassette, sub-family A member 4 [Homo
            sapiens]
          Length = 2273

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 1/92 (1%)

Query: 27   LFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRG 86
            +F+ + + ++  P    G +       P H       + G   + +   +    +  P G
Sbjct: 1272 IFLKVTEDSDSGPLFAGGAQQKRENVNPRHPCLGPREKAGQTPQDSNVCSPGAPAAHPEG 1331

Query: 87   RNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKK 118
            +  P P+ P P L  GT+L L Q  + LL+K+
Sbjct: 1332 QPPPEPECPGPQLNTGTQLVL-QHVQALLVKR 1362


>gi|41406050 docking protein 2 [Homo sapiens]
          Length = 412

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 151 RSQQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLM 210
           R +  RK +    C +  A +   A +PR  S  F+E + R+     P A   +W + + 
Sbjct: 52  RCEAARKVIRLSDCLRV-AEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQAIC 110

Query: 211 VLA 213
           +LA
Sbjct: 111 LLA 113


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.138    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,317,173
Number of Sequences: 37866
Number of extensions: 867431
Number of successful extensions: 3648
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 3564
Number of HSP's gapped (non-prelim): 127
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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