Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CHST8 Sequence: fasta or formatted (424aa) NCBI GI: 189217886
Description:

carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8

Referenced in:

Protein Glycosylation

Other entries for this name:
alt mRNA [424aa] carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
alt mRNA [424aa] carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         34           3
 C cysteine            1.4          6           1
 D aspartate           5.7         24           2
 E glutamate           3.5         15           1
 F phenylalanine       5.7         24           2
 G glycine             5.2         22           2
 H histidine           3.5         15           2
 I isoleucine          3.5         15           1
 K lysine              3.5         15           2
 L leucine            10.1         43           3
 M methionine          2.6         11           1
 N asparagine          2.4         10           1
 P proline             7.3         31           2
 Q glutamine           4.7         20           2
 R arginine           11.8         50           4
 S serine              7.1         30           3
 T threonine           4.5         19           2
 V valine              5.0         21           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbohydrate (N-acetylgalactosamine 4-0) sulfotrans... 
CHST8                 1.000   carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...
CHST8                 1.000   carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...
CHST9                 0.434   GalNAc-4-sulfotransferase 2 
CHST11                0.227   carbohydrate sulfotransferase 11 
CHST12                0.185   carbohydrate sulfotransferase 12 
CHST13                0.182   carbohydrate sulfotransferase 13 
CHST14                0.162   dermatan 4 sulfotransferase 1 
CHST10                0.151   HNK-1 sulfotransferase 
ZNF219                0.012   zinc finger protein 219 
ZNF219                0.012   zinc finger protein 219 
ZNF219                0.012   zinc finger protein 219 
LOC728888             0.011   PREDICTED: similar to acyl-CoA synthetase medium-ch...
RNASEN                0.008   ribonuclease III, nuclear isoform 2 
RNASEN                0.008   ribonuclease III, nuclear isoform 1 
C2orf55               0.008   hypothetical protein LOC343990 
LOC646509             0.008   PREDICTED: hypothetical protein 
MDC1                  0.007   mediator of DNA-damage checkpoint 1 
LOC128322             0.007   PREDICTED: similar to nuclear transport factor 2 [H...
CACNA1B               0.007   calcium channel, voltage-dependent, N type, alpha 1B ...
WNK2                  0.007   WNK lysine deficient protein kinase 2 
PLEKHA4               0.007   pleckstrin homology domain containing family A memb...
LOC100131320          0.007   PREDICTED: hypothetical protein isoform 1 
LOC100294438          0.007   PREDICTED: hypothetical protein 
CDC42BPG              0.007   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
LOC100128398          0.006   PREDICTED: hypothetical protein 
LOC100128398          0.006   PREDICTED: hypothetical protein 
LOC100128398          0.006   PREDICTED: hypothetical protein 
ABCA4                 0.006   ATP-binding cassette, sub-family A member 4 
DOK2                  0.006   docking protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press