Guide to the Human Genome
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Name: CHST11 Sequence: fasta or formatted (352aa) NCBI GI: 8923758
Description:

carbohydrate sulfotransferase 11

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         15           1
 C cysteine            2.6          9           2
 D aspartate           4.0         14           2
 E glutamate           6.8         24           2
 F phenylalanine       4.8         17           2
 G glycine             2.8         10           1
 H histidine           3.7         13           1
 I isoleucine          4.3         15           2
 K lysine              6.5         23           1
 L leucine             9.9         35           2
 M methionine          3.7         13           2
 N asparagine          5.1         18           1
 P proline             4.5         16           1
 Q glutamine           4.3         15           1
 R arginine            7.1         25           2
 S serine              6.0         21           2
 T threonine           6.2         22           2
 V valine              6.8         24           2
 W tryptophan          0.6          2           1
 Y tyrosine            6.0         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbohydrate sulfotransferase 11 
CHST13                0.423   carbohydrate sulfotransferase 13 
CHST12                0.273   carbohydrate sulfotransferase 12 
CHST8                 0.273   carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...
CHST8                 0.273   carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...
CHST8                 0.273   carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...
CHST9                 0.268   GalNAc-4-sulfotransferase 2 
CHST14                0.223   dermatan 4 sulfotransferase 1 
CHST10                0.193   HNK-1 sulfotransferase 
HS2ST1                0.014   heparan sulfate 2-O-sulfotransferase 1 isoform 2 [H...
HS2ST1                0.014   heparan sulfate 2-O-sulfotransferase 1 isoform 1 [Hom...
DPYSL4                0.009   dihydropyrimidinase-like 4 
DPY19L4               0.009   dpy-19-like 4 
TTN                   0.007   titin isoform N2-A 
TTN                   0.007   titin isoform novex-2 
TTN                   0.007   titin isoform novex-1 
TTN                   0.007   titin isoform N2-B 
AQP3                  0.007   aquaporin 3 
KIAA1109              0.007   fragile site-associated protein 
TTN                   0.006   titin isoform novex-3 
PLA2G4E               0.006   phospholipase A2, group 4E 
A2ML1                 0.004   alpha-2-macroglobulin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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