Search of human proteins with 19923483

Search of human proteins with 19923483

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19923483 GTPase Rab14 [Homo sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19923483 GTPase Rab14 [Homo sapiens]                               436   e-123
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          257   6e-69
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         252   1e-67
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           250   7e-67
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    244   3e-65
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        185   3e-47
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 184   4e-47
gi|254281345 RAB2B protein isoform 2 [Homo sapiens]                   184   6e-47
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   175   2e-44
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]          174   5e-44
gi|116812567 RAB25 [Homo sapiens]                                     172   1e-43
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           170   1e-42
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          169   2e-42
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]         166   1e-41
gi|50234889 RAB43 protein [Homo sapiens]                              164   5e-41
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           163   9e-41
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         163   1e-40
gi|16933567 mel transforming oncogene [Homo sapiens]                  162   3e-40
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          162   3e-40
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   160   6e-40
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            160   6e-40
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            160   6e-40
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   160   6e-40
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   160   8e-40
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      158   4e-39
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          157   6e-39
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]          155   3e-38
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           154   5e-38
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         151   4e-37
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          149   1e-36

>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  436 bits (1122), Expect = e-123
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 60
           MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
Sbjct: 1   MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 60

Query: 61  KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 120
           KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
Sbjct: 61  KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 120

Query: 121 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS 180
           LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
Sbjct: 121 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS 180

Query: 181 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215
           LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
Sbjct: 181 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  257 bits (656), Expect = 6e-69
 Identities = 127/209 (60%), Positives = 158/209 (75%), Gaps = 1/209 (0%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK+++IG+ G GKSCLLHQF EKKF  D  HTIGVEFG++II V G+ +KLQIWDT
Sbjct: 10  YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 69

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTDAR L + N VIIL GNK D
Sbjct: 70  AGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKD 129

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           L+A R+VT+ EA +FA+EN L+FLE SA TGENVE+AF++ A+KI   I+ G LD     
Sbjct: 130 LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMG 189

Query: 188 SGVQHKPSAPQGGRLTSEPQ-PQREGCGC 215
           SG+Q+  +A +  R     Q P  + CGC
Sbjct: 190 SGIQYGDAALRQLRSPRRAQAPNAQECGC 218


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  252 bits (644), Expect = 1e-67
 Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 11/214 (5%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK+++IG  G GKSCLLHQF E KF  D  HTIGVEFG+R++ V G+ +KLQIWDT
Sbjct: 5   YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 64

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTDAR L +PN V+IL GNK D
Sbjct: 65  AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKD 124

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           L+ +R+VT+ EA +FA+EN L+FLE SA TGENVE+AFL+ A+ I   I  G LD     
Sbjct: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 184

Query: 188 SGVQHKPSA------PQGGRLTSEPQPQREGCGC 215
           SG+Q+  ++      P+  +  + PQP    CGC
Sbjct: 185 SGIQYGDASLRQLRQPRSAQAVA-PQP----CGC 213


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  250 bits (638), Expect = 7e-67
 Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 1/209 (0%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I + G++IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL DAR  +N N VI+LIGNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           LE++R+V  EE + FA E+GL+F+E SAKT  NVE+AF+  AK+IY+ IQ+G  D+N   
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182

Query: 188 SGVQHKPS-APQGGRLTSEPQPQREGCGC 215
           +G++  P  A            Q+ G GC
Sbjct: 183 NGIKIGPQHAATNATHAGNQGGQQAGGGC 211


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  244 bits (624), Expect = 3e-65
 Identities = 121/213 (56%), Positives = 155/213 (72%), Gaps = 7/213 (3%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R++ + G++IKLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR  ++ N VI+LIGNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           LE++RDV  EE + FA E+GL+F+E SAKT  NVE+AF+  AK+IY+ IQ G  D++   
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEA 182

Query: 188 SGVQHKPS-------APQGGRLTSEPQPQREGC 213
           +G++  P         P   +  S       GC
Sbjct: 183 NGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC 215


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  185 bits (469), Expect = 3e-47
 Identities = 93/186 (50%), Positives = 123/186 (66%)

Query: 1   MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 60
           M T    Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR I+V G+ I
Sbjct: 1   MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60

Query: 61  KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 120
           K QIWDTAGQER+RA+T +YYRGA GAL+VYDI +  TY ++  WL + R+  + N VI+
Sbjct: 61  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120

Query: 121 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS 180
           L+GNK+DL   R V  +EA+ FAE+N L F+E SA    NVE+AF     +IY+ +    
Sbjct: 121 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ 180

Query: 181 LDLNAA 186
           +   AA
Sbjct: 181 IADRAA 186


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  184 bits (468), Expect = 4e-47
 Identities = 92/174 (52%), Positives = 119/174 (68%)

Query: 1   MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 60
           M T    Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR I+V G+ I
Sbjct: 1   MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60

Query: 61  KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 120
           K QIWDTAGQER+RA+T +YYRGA GAL+VYDI +  TY ++  WL + R+  + N VI+
Sbjct: 61  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120

Query: 121 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 174
           L+GNK+DL   R V  +EA+ FAE+NGL F+E SA    NVE AF     +IY+
Sbjct: 121 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174


>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
          Length = 170

 Score =  184 bits (466), Expect = 6e-47
 Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 7/169 (4%)

Query: 52  IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
           ++ + G++IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR 
Sbjct: 1   MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60

Query: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
            ++ N VI+LIGNK+DLE++RDV  EE + FA E+GL+F+E SAKT  NVE+AF+  AK+
Sbjct: 61  HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120

Query: 172 IYQNIQDGSLDLNAAESGVQHKPS-------APQGGRLTSEPQPQREGC 213
           IY+ IQ G  D++   +G++  P         P   +  S       GC
Sbjct: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC 169


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  175 bits (444), Expect = 2e-44
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 2/202 (0%)

Query: 1   MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 60
           M++    Y Y+FK ++IGD GVGKSCLL +F +  +      TIGV+F  R IE+ G+ I
Sbjct: 1   MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60

Query: 61  KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 120
           KLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++  WL +     + N   +
Sbjct: 61  KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL 120

Query: 121 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS 180
           L+GNK DL  ++ V Y  AK+FA+  G+ FLE SAK   NVE +F+  A +I + +  G+
Sbjct: 121 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA 180

Query: 181 LDLNAAESGV--QHKPSAPQGG 200
               A +S V  Q  P    GG
Sbjct: 181 TAGGAEKSNVKIQSTPVKQSGG 202


>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  174 bits (441), Expect = 5e-44
 Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 7/212 (3%)

Query: 10  YIFKYIIIGDMGVGKSCLLHQFTEKKFMA----DCPHTIGVEFGTRIIEVS-GQKIKLQI 64
           Y F+ I+IGD  VGKSCLLH+FT+ +F       C  T+GV+F +R++E+  G++IKLQ+
Sbjct: 7   YQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQL 66

Query: 65  WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP-NTVIILIG 123
           WDTAGQERFR++TRSYYR + G  +V+DIT R ++ H+  WL +A+    P   V +L+G
Sbjct: 67  WDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRIVFLLVG 126

Query: 124 NKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDL 183
           +K DL +QR VT EEA++ + + G+ ++E SAK   NVE++F    + IY+ I+ G + +
Sbjct: 127 HKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIKKGEICI 186

Query: 184 NAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215
                GV+     P     + E    R+ C C
Sbjct: 187 QDGWEGVK-SGFVPNTVHSSEEAVKPRKECFC 217


>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score =  172 bits (437), Expect = 1e-43
 Identities = 87/196 (44%), Positives = 126/196 (64%), Gaps = 8/196 (4%)

Query: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
           +Y+++FK ++IG+ GVGK+ LL +FT  +F  D   TIGVEF TR + +    +K QIWD
Sbjct: 8   DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 67

Query: 67  TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
           TAG ER+RA+T +YYRGA GAL+V+D+T+  TY  +  WL +  +      V++L+GNK+
Sbjct: 68  TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 127

Query: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIY--------QNIQD 178
           DL   R+V  EEA+ FAE NGLLFLE SA    NVE AF    K+I+         +I+ 
Sbjct: 128 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRT 187

Query: 179 GSLDLNAAESGVQHKP 194
            ++ L +A++G +  P
Sbjct: 188 NAITLGSAQAGQEPGP 203


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  170 bits (430), Expect = 1e-42
 Identities = 80/182 (43%), Positives = 120/182 (65%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y Y+FK ++IGD GVGK+CLL +F+E  F      TIG++F  R IE+ G+KIKLQIWDT
Sbjct: 5   YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERFR +T +YYRGA G ++VYDIT   +++++ +W+ +     + +   +++GNK D
Sbjct: 65  AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           +  +R V+ E  ++ A + G+ FLE SAK+  NVE+AF   A+ I   +     D N+A 
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAG 184

Query: 188 SG 189
           +G
Sbjct: 185 AG 186


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  169 bits (427), Expect = 2e-42
 Identities = 89/199 (44%), Positives = 121/199 (60%), Gaps = 11/199 (5%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y Y+FK ++IGD GVGKSCLL +F +  +      TIGV+F  R IE+ G+ IKLQIWDT
Sbjct: 5   YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERFR +T SYYRGA G ++VYD+T + +Y ++  WL +     + N   +L+GNK+D
Sbjct: 65  AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           L  ++ V    AK+FA+  G+ FLE SAK   NVE AF+  A +I + +  G     AA 
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG-----AAS 179

Query: 188 SG------VQHKPSAPQGG 200
            G      +   P  P GG
Sbjct: 180 GGERPNLKIDSTPVKPAGG 198


>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
          Length = 213

 Score =  166 bits (420), Expect = 1e-41
 Identities = 79/184 (42%), Positives = 123/184 (66%), Gaps = 2/184 (1%)

Query: 10  YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS-GQKIKLQIWDTA 68
           Y F+ I+IGD  VGKSCL+ +FTE +F      T+GV+F +R++E+  G++IKLQIWDTA
Sbjct: 7   YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66

Query: 69  GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP-NTVIILIGNKAD 127
           GQERFR++TR+YYR + G L+++DIT R ++ ++  WL + +    P   V +L+G+K D
Sbjct: 67  GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           L+ QR VT  EA++ A   G+ ++E SA+   NVE AF +  + IY+ ++ G + +    
Sbjct: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGW 186

Query: 188 SGVQ 191
            GV+
Sbjct: 187 EGVK 190


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  164 bits (415), Expect = 5e-41
 Identities = 84/209 (40%), Positives = 123/209 (58%), Gaps = 12/209 (5%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK +++GD  VGK+C++ +F    F      TIGV+F  + +E+ G+++KLQIWDT
Sbjct: 15  YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERFR +T+SYYR A GA++ YDIT+RS++  +  W+ D R     N V +LIGNK+D
Sbjct: 75  AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134

Query: 128 LEAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
           L   R+V+  EA+  AE   +L  +E SAK   NVE+AFL  A ++              
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR----------- 183

Query: 187 ESGVQHKPSAPQGGRLTSEPQPQREGCGC 215
             G      +P   +L S+   +  GCGC
Sbjct: 184 HGGPLFSEKSPDHIQLNSKDIGEGWGCGC 212


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  163 bits (413), Expect = 9e-41
 Identities = 73/165 (44%), Positives = 112/165 (67%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK ++IGD GVGK+CL+ +F E  F      TIG++F  R +++ G+KIKLQ+WDT
Sbjct: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERF+ +T +YYRGA G ++VYDIT   ++ ++ +W+   +   +     +L+GNK D
Sbjct: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           +EA+R V  E+A + A E+G+ F E SAK+  NV++AF   A+ I
Sbjct: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  163 bits (412), Expect = 1e-40
 Identities = 78/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)

Query: 4   APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
           A  N+ Y+FK I+IGD  VGK+C++  F    +     +TIGV+F  R +++ G+K+K+Q
Sbjct: 10  ADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQ 69

Query: 64  IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 123
           +WDTAGQERFR +T+SYYR A  A++ YD+TRRST+  +  W+ +       N VI+LIG
Sbjct: 70  VWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIG 129

Query: 124 NKADLEAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKI 172
           NK DL  +R V +E+A   AE+ GLL  LE SAK  +N+E+ F+  AK++
Sbjct: 130 NKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  162 bits (409), Expect = 3e-40
 Identities = 81/208 (38%), Positives = 130/208 (62%), Gaps = 8/208 (3%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y Y+FK ++IGD GVGK+C+L +F+E  F +    TIG++F  R IE+ G++IKLQIWDT
Sbjct: 5   YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERFR +T +YYRGA G ++VYDIT   +++++ +W+ +     + +   +++GNK D
Sbjct: 65  AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
           +  +R V+ E  ++ A + G+ F+E SAK   NVE+AF   A+ I   + D  L+ N+ +
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM-DKKLEGNSPQ 183

Query: 188 SGVQHKPSAPQGGRLTSEPQPQREGCGC 215
                   + QG ++T + Q +     C
Sbjct: 184 -------GSNQGVKITPDQQKRSSFFRC 204


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  162 bits (409), Expect = 3e-40
 Identities = 73/180 (40%), Positives = 118/180 (65%)

Query: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
           +Y ++FK ++IG+ GVGK+CL+ +FT+  F      TIGV+F  + +E++G+K+KLQIWD
Sbjct: 5   DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 64

Query: 67  TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
           TAGQERFR++T+SYYR A   ++ YDIT   ++  L  WL +     +   + +L+GNK 
Sbjct: 65  TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124

Query: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
           DL  +R+V+ + A++F+E   + +LE SAK  +NVE  FL+ A ++    +  +L  N +
Sbjct: 125 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVS 184


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  160 bits (406), Expect = 6e-40
 Identities = 72/165 (43%), Positives = 110/165 (66%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK ++IGD GVGK+CL+ +F E  F      TIG++F  R +++ G+KIKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERF+ +T +YYRGA G ++ YDIT   ++ ++ +W+       +     +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           +EA+R V  E+A + A E+G+ F E SAK+  NV++AF   A+ I
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  160 bits (406), Expect = 6e-40
 Identities = 72/165 (43%), Positives = 110/165 (66%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK ++IGD GVGK+CL+ +F E  F      TIG++F  R +++ G+KIKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERF+ +T +YYRGA G ++ YDIT   ++ ++ +W+       +     +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           +EA+R V  E+A + A E+G+ F E SAK+  NV++AF   A+ I
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  160 bits (406), Expect = 6e-40
 Identities = 72/165 (43%), Positives = 110/165 (66%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
           Y ++FK ++IGD GVGK+CL+ +F E  F      TIG++F  R +++ G+KIKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
           AGQERF+ +T +YYRGA G ++ YDIT   ++ ++ +W+       +     +L+GNK D
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           +EA+R V  E+A + A E+G+ F E SAK+  NV++AF   A+ I
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  160 bits (406), Expect = 6e-40
 Identities = 78/168 (46%), Positives = 116/168 (69%), Gaps = 1/168 (0%)

Query: 6   YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM-ADCPHTIGVEFGTRIIEVSGQKIKLQI 64
           +N   + K I++GD GVGK+ LL QF + KF+      T+G+ F  +++ V G ++KLQI
Sbjct: 17  FNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQI 76

Query: 65  WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
           WDTAGQERFR+VT +YYR A   L++YDIT +S+++++ +WLT+       + VI+L+GN
Sbjct: 77  WDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGN 136

Query: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           KAD+ ++R +  E+ +  A E G+ FLE SAKTG NVE AFL  AK++
Sbjct: 137 KADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  160 bits (405), Expect = 8e-40
 Identities = 76/167 (45%), Positives = 116/167 (69%), Gaps = 1/167 (0%)

Query: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADC-PHTIGVEFGTRIIEVSGQKIKLQIW 65
           +Y    K +++GD GVGK+C L QF +  F++     T+G++F  +++ V G ++KLQIW
Sbjct: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84

Query: 66  DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNK 125
           DTAGQERFR+VT +YYR A   L++YDIT +S+++++ +WLT+       + VI+L+GNK
Sbjct: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144

Query: 126 ADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           AD+ ++R +  E+ +  A E G+ FLE SAKTG NVE AFL  AK++
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  158 bits (399), Expect = 4e-39
 Identities = 76/169 (44%), Positives = 109/169 (64%)

Query: 4   APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
           A   Y  +FK ++IGD GVGK+C+L +F++  F      TIG++F  + +E+ G+KIKLQ
Sbjct: 2   AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61

Query: 64  IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 123
           IWDTAGQERF  +T SYYRGA G ++VYDIT   ++ ++S WL +     N +   +L+G
Sbjct: 62  IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121

Query: 124 NKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
           NK D++ +R V   +  Q A E+G+ F E SAK   N+E AFL  A+ I
Sbjct: 122 NKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  157 bits (397), Expect = 6e-39
 Identities = 73/168 (43%), Positives = 116/168 (69%), Gaps = 1/168 (0%)

Query: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADC-PHTIGVEFGTRIIEVSGQKIKLQIWD 66
           Y   FK +++GD GVGK+CLL +F +  F+A     T+G++F  ++++V G K+KLQ+WD
Sbjct: 60  YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119

Query: 67  TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
           TAGQERFR+VT +YYR A   L++YD+T +++++++ +WLT+       +  ++L+GNK 
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179

Query: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 174
           D   +R V  E+ ++ A+E GL F+E SAKTG NV+ AF   AK++ Q
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQ 227


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score =  155 bits (391), Expect = 3e-38
 Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 6/191 (3%)

Query: 13  KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
           K +IIG+ GVGKS LL +FT+  F  +   TIGV+F  + I V G K KL IWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69

Query: 73  FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVI-ILIGNKADLEAQ 131
           FR +T SYYRGA G ++VYD+TRR T+  L +WL +       N ++ +L+GNK D E  
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE-N 128

Query: 132 RDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
           R+V   E  +FA ++ +LF+EASAKT + V+ AF E  +KI Q    G  +      GV+
Sbjct: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT--PGLWESENQNKGVK 186

Query: 192 --HKPSAPQGG 200
             H+     GG
Sbjct: 187 LSHREEGQGGG 197


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  154 bits (389), Expect = 5e-38
 Identities = 77/209 (36%), Positives = 121/209 (57%), Gaps = 6/209 (2%)

Query: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
           N+ Y+FK +IIG+  VGK+  L ++ +  F      T+G++F  + I  + ++IKLQIWD
Sbjct: 18  NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 77

Query: 67  TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
           TAGQER+R +T +YYRGA G +++YDIT   ++N +  W T  +  +  N  ++L+GNK 
Sbjct: 78  TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 137

Query: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
           D+E +R V+ E  +Q A+  G  F EASAK   NV+  F      I + + +    L+ A
Sbjct: 138 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE---SLDTA 194

Query: 187 ESGVQHKPSAPQGGRLTSEPQPQREGCGC 215
           +  V     A QG +L+ +  P  + C C
Sbjct: 195 DPAV---TGAKQGPQLSDQQVPPHQDCAC 220


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  151 bits (382), Expect = 4e-37
 Identities = 75/196 (38%), Positives = 122/196 (62%), Gaps = 3/196 (1%)

Query: 5   PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
           P    +  + IIIG  GVGK+ L+ +FT+  F   C  T+GV+F  + +E+ G+KI+LQI
Sbjct: 36  PRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQI 95

Query: 65  WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
           WDTAGQERF ++T +YYR A G ++VYDIT++ T++ L  W+       + +  ++L+GN
Sbjct: 96  WDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGN 155

Query: 125 KADLEAQRDVTYEEAKQFAEE-NGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL-- 181
           K D E  R++T ++ ++FA++  G+ F EASAK   NV++ FL+    I + +    L  
Sbjct: 156 KLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 215

Query: 182 DLNAAESGVQHKPSAP 197
           +L+ +   +Q +P  P
Sbjct: 216 ELSNSILSLQPEPEIP 231


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  149 bits (377), Expect = 1e-36
 Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 7/209 (3%)

Query: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
           N+ Y+FK +IIG+  VGK+  L ++ +  F +    T+G++F  + +  + ++IKLQIWD
Sbjct: 26  NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWD 85

Query: 67  TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
           TAGQER+R +T +YYRGA G +++YDIT   ++N +  W T  +  +  N  +IL+GNK 
Sbjct: 86  TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKC 145

Query: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
           D+E +R ++ E  +   E+ G  F E SAK   NV+  F      I   + + SL+ + A
Sbjct: 146 DMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSE-SLETDPA 204

Query: 187 ESGVQHKPSAPQGGRLTSEPQPQREGCGC 215
            +      +A Q  RL   P P +  C C
Sbjct: 205 IT------AAKQNTRLKETPPPPQPNCAC 227


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,761,592
Number of Sequences: 37866
Number of extensions: 299781
Number of successful extensions: 1385
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 985
Number of HSP's gapped (non-prelim): 287
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.