Guide to the Human Genome
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Name: KDR Sequence: fasta or formatted (1356aa) NCBI GI: 11321597
Description:

kinase insert domain receptor precursor

Referenced in:

Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         68           2
 C cysteine            2.4         33           1
 D aspartate           5.1         69           2
 E glutamate           7.6        103           4
 F phenylalanine       3.0         41           2
 G glycine             6.3         85           2
 H histidine           1.9         26           2
 I isoleucine          5.9         80           3
 K lysine              6.2         84           2
 L leucine             9.1        124           3
 M methionine          1.9         26           1
 N asparagine          3.9         53           2
 P proline             5.2         71           3
 Q glutamine           3.8         51           2
 R arginine            4.5         61           2
 S serine              8.3        113           2
 T threonine           6.7         91           2
 V valine              8.1        110           4
 W tryptophan          1.4         19           1
 Y tyrosine            3.5         48           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinase insert domain receptor precursor 
FLT4                  0.375   fms-related tyrosine kinase 4 isoform 1 precursor [...
FLT4                  0.375   fms-related tyrosine kinase 4 isoform 2 precursor [...
FLT1                  0.374   fms-related tyrosine kinase 1 isoform 1 precursor [...
FLT1                  0.126   fms-related tyrosine kinase 1 isoform 3 precursor [...
PDGFRA                0.126   platelet-derived growth factor receptor alpha precurs...
KIT                   0.119   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge...
KIT                   0.118   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
CSF1R                 0.116   colony stimulating factor 1 receptor precursor [Homo...
FGFR1                 0.114   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.114   fibroblast growth factor receptor 1 isoform 3 precur...
FGFR1                 0.114   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.114   fibroblast growth factor receptor 1 isoform 1 precu...
FLT3                  0.112   fms-related tyrosine kinase 3 
FGFR2                 0.112   fibroblast growth factor receptor 2 isoform 8 precu...
FGFR3                 0.112   fibroblast growth factor receptor 3 isoform 1 precurs...
FLT1                  0.112   fms-related tyrosine kinase 1 isoform 2 precursor [...
FGFR2                 0.112   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.112   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR2                 0.112   fibroblast growth factor receptor 2 isoform 1 precu...
PDGFRB                0.111   platelet-derived growth factor receptor beta precurso...
FGFR2                 0.111   fibroblast growth factor receptor 2 isoform 2 precu...
FGFR3                 0.110   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR2                 0.110   fibroblast growth factor receptor 2 isoform 9 precu...
FGFR2                 0.110   fibroblast growth factor receptor 2 isoform 3 precu...
FGFR4                 0.110   fibroblast growth factor receptor 4 isoform 2 precur...
FGFR4                 0.108   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.108   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR2                 0.108   fibroblast growth factor receptor 2 isoform 4 precu...
FGFR3                 0.107   fibroblast growth factor receptor 3 isoform 2 precur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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