Search of human proteins with 197382708

Search of human proteins with 197382708

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|197382708 eukaryotic translation initiation factor 4E family
member 3 isoform a [Homo sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|197382708 eukaryotic translation initiation factor 4E family ...   463   e-131
gi|197382664 eukaryotic translation initiation factor 4E family ...   245   2e-65
gi|197382649 eukaryotic translation initiation factor 4E family ...   245   2e-65
gi|27659734 eukaryotic translation initiation factor 4E family m...   245   2e-65
gi|4757702 eukaryotic translation initiation factor 4E member 2 ...   104   7e-23
gi|194578907 eukaryotic translation initiation factor 4E isoform...    85   6e-17
gi|4503535 eukaryotic translation initiation factor 4E isoform 1...    85   6e-17
gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens]           83   2e-16
gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]           83   2e-16
gi|169210992 PREDICTED: hypothetical protein LOC100131693 [Homo ...    83   2e-16
gi|150378456 eukaryotic translation initiation factor 4E family ...    77   1e-14
gi|194578909 eukaryotic translation initiation factor 4E isoform...    70   1e-12
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    37   0.018
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    36   0.023
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     36   0.030
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]                 35   0.040
gi|46409434 hypothetical protein LOC388759 [Homo sapiens]              34   0.089
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          34   0.12 
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...    33   0.20 
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...    33   0.20 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    33   0.20 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    33   0.20 
gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-ri...    33   0.20 
gi|56549694 enabled homolog isoform a [Homo sapiens]                   32   0.34 
gi|39930375 enabled homolog isoform b [Homo sapiens]                   32   0.34 
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ...    32   0.34 
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ...    32   0.34 
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]    32   0.34 
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ...    32   0.34 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    32   0.44 

>gi|197382708 eukaryotic translation initiation factor 4E family
           member 3 isoform a [Homo sapiens]
          Length = 224

 Score =  463 bits (1191), Expect = e-131
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWTFWLDRS 60
           MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWTFWLDRS
Sbjct: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWTFWLDRS 60

Query: 61  LPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESN 120
           LPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESN
Sbjct: 61  LPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESN 120

Query: 121 AKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNV 180
           AKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNV
Sbjct: 121 AKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNV 180

Query: 181 NASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 224
           NASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH
Sbjct: 181 NASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 224


>gi|197382664 eukaryotic translation initiation factor 4E family
           member 3 isoform b [Homo sapiens]
          Length = 118

 Score =  245 bits (626), Expect = 2e-65
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 107 MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV 166
           MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV
Sbjct: 1   MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV 60

Query: 167 SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 224
           SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH
Sbjct: 61  SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 118


>gi|197382649 eukaryotic translation initiation factor 4E family
           member 3 isoform b [Homo sapiens]
          Length = 118

 Score =  245 bits (626), Expect = 2e-65
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 107 MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV 166
           MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV
Sbjct: 1   MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV 60

Query: 167 SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 224
           SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH
Sbjct: 61  SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 118


>gi|27659734 eukaryotic translation initiation factor 4E family
           member 3 isoform b [Homo sapiens]
          Length = 118

 Score =  245 bits (626), Expect = 2e-65
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 107 MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV 166
           MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV
Sbjct: 1   MRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSV 60

Query: 167 SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 224
           SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH
Sbjct: 61  SVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH 118


>gi|4757702 eukaryotic translation initiation factor 4E member 2
           [Homo sapiens]
          Length = 245

 Score =  104 bits (259), Expect = 7e-23
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 17/192 (8%)

Query: 39  ALQPEPGGVPLHSSWTFWLDRSLPG--ATAAECASNLKKIYTVQTVQIFWSVYNNIPPVT 96
           A+ P P   PL  ++TFW  R  PG   ++     N+K+I T  +V+ FW  Y+++    
Sbjct: 46  AVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPG 105

Query: 97  SLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAA 156
            L     +HL +   +P+WE+++N  GG W +++ K   S  W+ L+LA +GEQF     
Sbjct: 106 DLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQF----M 161

Query: 157 ADDEVIGVSVSVRDREDVVQVWNVNASLVGEAT------VLEKIYELLPHITFKAVFYKP 210
             +E+ G  VSVR +ED++ +WN  AS   +AT       L ++  L P+   +   YK 
Sbjct: 162 VGEEICGAVVSVRFQEDIISIWNKTAS--DQATTARIRDTLRRVLNLPPNTIME---YKT 216

Query: 211 HEEHHAFEGGRG 222
           H +     G  G
Sbjct: 217 HTDSIKMPGRLG 228


>gi|194578907 eukaryotic translation initiation factor 4E isoform 3
           [Homo sapiens]
          Length = 237

 Score = 84.7 bits (208), Expect = 6e-17
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 11/182 (6%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++    T     +NL+ I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 58  PLQNRWALWFFKNDKSKT---WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 114

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIG 163
           +    P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G
Sbjct: 115 KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 171

Query: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRG 222
             V+VR + D + +W          T + ++Y+    +  K V  Y+ H +     G   
Sbjct: 172 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 231

Query: 223 KH 224
           K+
Sbjct: 232 KN 233


>gi|4503535 eukaryotic translation initiation factor 4E isoform 1
           [Homo sapiens]
          Length = 217

 Score = 84.7 bits (208), Expect = 6e-17
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 11/182 (6%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++    T     +NL+ I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 38  PLQNRWALWFFKNDKSKT---WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIG 163
           +    P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G
Sbjct: 95  KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 151

Query: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRG 222
             V+VR + D + +W          T + ++Y+    +  K V  Y+ H +     G   
Sbjct: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211

Query: 223 KH 224
           K+
Sbjct: 212 KN 213


>gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens]
          Length = 217

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++    T     +NL  I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 38  PLQNRWALWFFKNDKSKT---WQANLWLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIG 163
           +    P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G
Sbjct: 95  KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 151

Query: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRG 222
             V+VR + D + +W          T + ++Y+    +  K V  Y+ H +     G   
Sbjct: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211

Query: 223 KH 224
           K+
Sbjct: 212 KN 213


>gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]
          Length = 217

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++    T     +NL  I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 38  PLQNRWALWFFKNDKSKT---WQANLWLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIG 163
           +    P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G
Sbjct: 95  KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 151

Query: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRG 222
             V+VR + D + +W          T + ++Y+    +  K V  Y+ H +     G   
Sbjct: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211

Query: 223 KH 224
           K+
Sbjct: 212 KN 213


>gi|169210992 PREDICTED: hypothetical protein LOC100131693 [Homo
           sapiens]
          Length = 217

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++    T     +NL  I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 38  PLQNRWALWFFKNDKSKT---WQANLWLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIG 163
           +    P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G
Sbjct: 95  KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 151

Query: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRG 222
             V+VR + D + +W          T + ++Y+    +  K V  Y+ H +     G   
Sbjct: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211

Query: 223 KH 224
           K+
Sbjct: 212 KN 213


>gi|150378456 eukaryotic translation initiation factor 4E family
           member 1B [Homo sapiens]
          Length = 242

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 11/171 (6%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++     +     NL  +  V TV+ FW++Y++I   + L   C Y L 
Sbjct: 63  PLQNRWALWFFKN---DRSRAWQDNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALF 119

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKD----STSTVWKELLLATIGEQFTDCAAADDEVIG 163
           +   +P+WE+  N +GG W + + K         +W E LL  IGE F + +    EV G
Sbjct: 120 KDGIQPMWEDSRNKRGGRWLVSLAKQQRHIELDRLWLETLLCLIGESFEEHSR---EVCG 176

Query: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEE 213
             V++R + D + VW   A        + ++Y+    ++ K +  Y+ H +
Sbjct: 177 AVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKERLGLSPKTIIGYQAHAD 227


>gi|194578909 eukaryotic translation initiation factor 4E isoform 2
           [Homo sapiens]
          Length = 248

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 42/213 (19%)

Query: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107
           PL + W  W  ++    T     +NL+ I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 38  PLQNRWALWFFKNDKSKT---WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94

Query: 108 RGERRPLWEEESNAKGGVWKMKVPKDS----------------------TSTVWKEL--- 142
           +    P+WE+E N +GG W + + K                         S  W ++   
Sbjct: 95  KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILP 154

Query: 143 ----------LLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLE 192
                     LL  IGE F D +   D+V G  V+VR + D + +W          T + 
Sbjct: 155 LQPPKVLELQLLCLIGESFDDYS---DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 211

Query: 193 KIYELLPHITFKAVF-YKPHEEHHAFEGGRGKH 224
           ++Y+    +  K V  Y+ H +     G   K+
Sbjct: 212 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 244


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
          sapiens]
          Length = 367

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 3  LPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGG 46
          L PAA PP  A  P  S +++++++P PPLG      L+P   G
Sbjct: 35 LYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATG 78



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 15/106 (14%)

Query: 6   AAAPPAGAREPPGSRAAAAAAAPEPP----LGLQQLSALQPEPGGVPLHSSWTFWLDRSL 61
           +++  A +     + AAAAAAA   P     GL + S+L P P    L+ S         
Sbjct: 128 SSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFS--------- 178

Query: 62  PGATAAECASNLKK--IYTVQTVQIFWSVYNNIPPVTSLPLRCSYH 105
           P A A        K          IFW      PP     L C+ H
Sbjct: 179 PSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPH 224


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 4   PPAAAPPAGAREPPGSRAAA-AAAAPEPPLGLQQ----LSALQPEPGGVPLHSSWTFWLD 58
           P    PPA    PP  RA A  AA+P+PP  +      LS+  P+PG     +   F  +
Sbjct: 774 PGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPE 833

Query: 59  RSLPGATAAE 68
            + PG  AAE
Sbjct: 834 GAFPGGGAAE 843


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   ALPPAAAPPAGAREPPGSRAAA----AAAAPEPPLGLQQLSALQPEPGGVP 48
           A PPA APPAG R  P    AA        P+PP   QQ     P+P   P
Sbjct: 185 AAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPP 235



 Score = 33.5 bits (75), Expect = 0.15
 Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 4   PP--AAAPPAGAREPPGSRAAAAAAAPEP 30
           PP   A PPA  R P G+ AAAAAAAP P
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPP 129



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 16/44 (36%), Positives = 17/44 (38%)

Query: 2   ALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPG 45
           A   AAAPP     PP     AAAA    P      +   P PG
Sbjct: 120 AAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPG 163



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 10/57 (17%)

Query: 2   ALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQ----------LSALQPEPGGVP 48
           A PP  AP A A      RAAAAAA   P  G  Q          L+A  P P   P
Sbjct: 132 APPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP 188



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 2   ALPPAAAPPAGAREPPGSRAA--AAAAAPEPPL 32
           A PPA A P     P G R A   A AA EPPL
Sbjct: 179 APPPAPAAPPAVAPPAGPRRAPPPAVAAREPPL 211


>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
          Length = 548

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 3   LPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWTF-WLDRSL 61
           +PP   PP+G   PP S        P PP   QQ     P P    + SS    W  RSL
Sbjct: 478 MPPPPPPPSGQPPPPPS-------GPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSL 530

Query: 62  PGATAA 67
           P A  A
Sbjct: 531 PAAAMA 536


>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
          Length = 237

 Score = 34.3 bits (77), Expect = 0.089
 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 4   PPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQL--SALQPEPG 45
           P  A PPAG R  PGS   +A AAP    G  +L   A Q  PG
Sbjct: 135 PSPAPPPAGPRPSPGSLGPSAPAAPRTARGAYELQGGASQDGPG 178


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 2   ALPPAAAPPAGAREP-PGSRAAAAAAAPEPPL--GLQQLSALQPEPGGVPLHS 51
           AL PA A PA    P PG R +  A  P PPL  GL       P+PGG P  S
Sbjct: 92  ALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSP----DPKPGGAPTSS 140



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 4   PPAAAPPAGAREP-PGSRAAAAAAAPEPPLGLQQLSALQPEPG 45
           PPA +PP     P P    A  AA+ +PP     ++   P PG
Sbjct: 285 PPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPG 327


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 12/56 (21%)

Query: 3   LPPAAAPPAGAREP------PGSRAAAAAAAPE-PPLGLQQ-----LSALQPEPGG 46
           LPP  +  AG  +P      P + AAAAAA P   PL LQQ     L+A+Q  PGG
Sbjct: 287 LPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGG 342


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 12/56 (21%)

Query: 3   LPPAAAPPAGAREP------PGSRAAAAAAAPE-PPLGLQQ-----LSALQPEPGG 46
           LPP  +  AG  +P      P + AAAAAA P   PL LQQ     L+A+Q  PGG
Sbjct: 300 LPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGG 355


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 16/48 (33%), Positives = 20/48 (41%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVP 48
           +A PP   PP+    PP S +A       PPL    L   +P P   P
Sbjct: 474 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP 521



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWT 54
           +ALPP  APP+    PP S  A  +      L +  L A    P   P+ + ++
Sbjct: 400 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 453


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 16/48 (33%), Positives = 20/48 (41%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVP 48
           +A PP   PP+    PP S +A       PPL    L   +P P   P
Sbjct: 435 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP 482



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWT 54
           +ALPP  APP+    PP S  A  +      L +  L A    P   P+ + ++
Sbjct: 361 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 414


>gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-rich
           carboxy-terminal domain, 4 [Homo sapiens]
          Length = 184

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 15/26 (57%), Positives = 17/26 (65%)

Query: 6   AAAPPAGAREPPGSRAAAAAAAPEPP 31
           AAAPP     PPG + A +AAAP PP
Sbjct: 100 AAAPPNAPGGPPGPQPAPSAAAPPPP 125


>gi|56549694 enabled homolog isoform a [Homo sapiens]
          Length = 591

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 3   LPPAAA-------PPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWTF 55
           LPP  A       PP G   PP   +      P PP    Q+    P P   PL +S  F
Sbjct: 319 LPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFF 378

Query: 56  WL-----DRSLPGATAAECASNLKKI 76
                  +R L G  AA   + L+K+
Sbjct: 379 LASMSEDNRPLTGLAAAIAGAKLRKV 404


>gi|39930375 enabled homolog isoform b [Homo sapiens]
          Length = 570

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 3   LPPAAA-------PPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWTF 55
           LPP  A       PP G   PP   +      P PP    Q+    P P   PL +S  F
Sbjct: 319 LPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFF 378

Query: 56  WL-----DRSLPGATAAECASNLKKI 76
                  +R L G  AA   + L+K+
Sbjct: 379 LASMSEDNRPLTGLAAAIAGAKLRKV 404


>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
           sapiens]
          Length = 261

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 15/40 (37%), Positives = 16/40 (40%)

Query: 9   PPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVP 48
           PP  AR P   RA    AAP PP G  +       P   P
Sbjct: 182 PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAP 221


>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
           sapiens]
          Length = 261

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 15/40 (37%), Positives = 16/40 (40%)

Query: 9   PPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVP 48
           PP  AR P   RA    AAP PP G  +       P   P
Sbjct: 182 PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAP 221


>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
          Length = 1073

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 9   PPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPE-----PGGVPLHSSWTFWLDRSLPG 63
           PP+  + PP + ++ +   P PP  L  LS  Q +     PGG  +     F +    P 
Sbjct: 60  PPSLLQPPPPAASSTSGPQPPPPQSLNLLSQAQLQAQPLAPGGTQMKKKSGFQITSVTPA 119

Query: 64  ATAAECASN 72
             +A  +SN
Sbjct: 120 QISASISSN 128


>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
           [Homo sapiens]
          Length = 1008

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 4   PPAAAPPA--GAREPPGSRAAAAAAAPEPPLGLQQLS 38
           P AAAPPA    R  PGS  AAA A PEP   ++ +S
Sbjct: 878 PQAAAPPAFPEVRVRPGSALAAAVAPPEPAEPVRDVS 914


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 17/54 (31%), Positives = 21/54 (38%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWT 54
           +A PP   PP+    PP S +A       PPL    L      P   P+  S T
Sbjct: 699 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT 752



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 7/56 (12%)

Query: 1   MALPPAAAPPA-------GAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPL 49
           +A PP  APPA       G   PP S  A       P L L  L A    P   PL
Sbjct: 587 IATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPL 642



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 1   MALPPAAAPPAGAREPPGSRAAAAAAAPEPPLGLQQLSALQPEPGGVPLHSSWT 54
           +ALPP  APP+    PP S  A  +      L +  L A    P   P+ + ++
Sbjct: 625 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 678


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,618,221
Number of Sequences: 37866
Number of extensions: 549265
Number of successful extensions: 6329
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 5422
Number of HSP's gapped (non-prelim): 958
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.