Guide to the Human Genome
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Name: EIF4E Sequence: fasta or formatted (217aa) NCBI GI: 4503535
Description:

eukaryotic translation initiation factor 4E isoform 1

Referenced in:

Translation Factors

Other entries for this name:
alt prot [237aa] eukaryotic translation initiation factor 4E isoform 3
alt prot [248aa] eukaryotic translation initiation factor 4E isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         11           1
 C cysteine            1.8          4           1
 D aspartate           6.5         14           2
 E glutamate           8.3         18           3
 F phenylalanine       3.7          8           2
 G glycine             5.1         11           2
 H histidine           2.3          5           1
 I isoleucine          5.1         11           1
 K lysine              7.4         16           1
 L leucine             7.8         17           2
 M methionine          1.4          3           1
 N asparagine          6.0         13           1
 P proline             5.1         11           2
 Q glutamine           3.2          7           2
 R arginine            5.5         12           2
 S serine              5.5         12           2
 T threonine           8.3         18           2
 V valine              5.5         12           2
 W tryptophan          3.7          8           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4E isoform 1... 
LOC100131693          0.988   PREDICTED: similar to hCG1777996 
LOC100131693          0.988   PREDICTED: similar to hCG1777996 
LOC100131693          0.988   PREDICTED: hypothetical protein LOC100131693 
EIF4E                 0.972   eukaryotic translation initiation factor 4E isoform...
EIF4E                 0.963   eukaryotic translation initiation factor 4E isoform...
EIF4E1B               0.641   eukaryotic translation initiation factor 4E family ...
EIF4E2                0.240   eukaryotic translation initiation factor 4E member 2 ...
EIF4E3                0.138   eukaryotic translation initiation factor 4E family ...
EIF4E3                0.067   eukaryotic translation initiation factor 4E family ...
EIF4E3                0.067   eukaryotic translation initiation factor 4E family ...
EIF4E3                0.067   eukaryotic translation initiation factor 4E family m...
CHD7                  0.009   chromodomain helicase DNA binding protein 7 
ADIPOR1               0.007   adiponectin receptor 1 
ADIPOR1               0.007   adiponectin receptor 1 
ACCN5                 0.007   amiloride-sensitive cation channel 5, intestinal [Ho...
TTC18                 0.007   tetratricopeptide repeat domain 18 
HOXD8                 0.007   homeobox D8 
GIT2                  0.007   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.007   G protein-coupled receptor kinase interacting ArfGA...
GIT2                  0.007   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.007   G protein-coupled receptor kinase interacting ArfGAP...
GIT2                  0.007   G protein-coupled receptor kinase interacting ArfGAP...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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