Guide to the Human Genome
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Name: EIF4E1B Sequence: fasta or formatted (242aa) NCBI GI: 150378456
Description:

eukaryotic translation initiation factor 4E family member 1B

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         19           2
 C cysteine            1.2          3           1
 D aspartate           4.1         10           1
 E glutamate          10.7         26           4
 F phenylalanine       2.5          6           2
 G glycine             7.0         17           2
 H histidine           2.9          7           1
 I isoleucine          3.7          9           2
 K lysine              7.0         17           1
 L leucine            10.7         26           2
 M methionine          1.2          3           1
 N asparagine          3.7          9           1
 P proline             2.9          7           1
 Q glutamine           3.3          8           2
 R arginine            7.4         18           1
 S serine              6.6         16           2
 T threonine           5.0         12           1
 V valine              6.6         16           2
 W tryptophan          3.7          9           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4E family ... 
LOC100131693          0.591   PREDICTED: similar to hCG1777996 
LOC100131693          0.591   PREDICTED: similar to hCG1777996 
LOC100131693          0.591   PREDICTED: hypothetical protein LOC100131693 
EIF4E                 0.591   eukaryotic translation initiation factor 4E isoform...
EIF4E                 0.591   eukaryotic translation initiation factor 4E isoform 1...
EIF4E                 0.555   eukaryotic translation initiation factor 4E isoform...
EIF4E2                0.226   eukaryotic translation initiation factor 4E member 2 ...
EIF4E3                0.111   eukaryotic translation initiation factor 4E family ...
EIF4E3                0.051   eukaryotic translation initiation factor 4E family ...
EIF4E3                0.051   eukaryotic translation initiation factor 4E family ...
EIF4E3                0.051   eukaryotic translation initiation factor 4E family m...
RANGAP1               0.015   Ran GTPase activating protein 1 
CDC2L2                0.011   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.011   cell division cycle 2-like 2 isoform 1 
EHMT2                 0.011   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.011   euchromatic histone-lysine N-methyltransferase 2 is...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
DCAF8L2               0.011   DDB1 and CUL4 associated factor 8-like 2 
FLJ40125              0.011   protein phosphatase 1B-like 
APOB48R               0.011   apolipoprotein B48 receptor 
WDR41                 0.011   WD repeat domain 41 
RPGR                  0.011   retinitis pigmentosa GTPase regulator isoform C [Hom...
ZBTB4                 0.011   zinc finger and BTB domain containing 4 
ZBTB4                 0.011   zinc finger and BTB domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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