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Search of human proteins with 197333809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197333809 joined to JAZF1 [Homo sapiens]
(739 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197333809 joined to JAZF1 [Homo sapiens] 1501 0.0
gi|239756770 PREDICTED: similar to KIAA0160 [Homo sapiens] 220 4e-57
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 58 4e-08
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 58 4e-08
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 58 4e-08
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 57 5e-08
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 57 5e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 57 5e-08
gi|195972866 keratin 10 [Homo sapiens] 56 1e-07
gi|109255251 loricrin [Homo sapiens] 53 9e-07
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 53 1e-06
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 52 2e-06
gi|55956899 keratin 9 [Homo sapiens] 52 2e-06
gi|194018511 keratin 77 [Homo sapiens] 51 3e-06
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 51 3e-06
gi|47132620 keratin 2 [Homo sapiens] 51 3e-06
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 51 4e-06
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 50 6e-06
gi|4502565 calpain, small subunit 1 [Homo sapiens] 50 8e-06
gi|51599151 calpain, small subunit 1 [Homo sapiens] 50 8e-06
gi|119395750 keratin 1 [Homo sapiens] 50 1e-05
gi|109452587 family with sequence similarity 98, member B isofor... 50 1e-05
gi|12707580 paired-like homeobox 2b [Homo sapiens] 49 1e-05
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 49 2e-05
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 49 2e-05
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 48 3e-05
gi|13775236 scratch [Homo sapiens] 48 3e-05
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 48 4e-05
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 48 4e-05
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 48 4e-05
>gi|197333809 joined to JAZF1 [Homo sapiens]
Length = 739
Score = 1501 bits (3887), Expect = 0.0
Identities = 739/739 (100%), Positives = 739/739 (100%)
Query: 1 MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA
Sbjct: 1 MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
Query: 61 AAAAGAAVLPVKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLTYMSH 120
AAAAGAAVLPVKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLTYMSH
Sbjct: 61 AAAAGAAVLPVKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLTYMSH 120
Query: 121 RNSRTNIKRKTFKVDDMLSKVEKMKGEQESHSLSAHLQLTFTGFFHKNDKPSPNSENEQN 180
RNSRTNIKRKTFKVDDMLSKVEKMKGEQESHSLSAHLQLTFTGFFHKNDKPSPNSENEQN
Sbjct: 121 RNSRTNIKRKTFKVDDMLSKVEKMKGEQESHSLSAHLQLTFTGFFHKNDKPSPNSENEQN 180
Query: 181 SVTLEVLLVKVCHKKRKDVSCPIRQVPTGKKQVPLNPDLNQTKPGNFPSLAVSSNEFEPS 240
SVTLEVLLVKVCHKKRKDVSCPIRQVPTGKKQVPLNPDLNQTKPGNFPSLAVSSNEFEPS
Sbjct: 181 SVTLEVLLVKVCHKKRKDVSCPIRQVPTGKKQVPLNPDLNQTKPGNFPSLAVSSNEFEPS 240
Query: 241 NSHMVKSYSLLFRVTRPGRREFNGMINGETNENIDVNEELPARRKRNREDGEKTFVAQMT 300
NSHMVKSYSLLFRVTRPGRREFNGMINGETNENIDVNEELPARRKRNREDGEKTFVAQMT
Sbjct: 241 NSHMVKSYSLLFRVTRPGRREFNGMINGETNENIDVNEELPARRKRNREDGEKTFVAQMT 300
Query: 301 VFDKNRRLQLLDGEYEVAMQEMEECPISKKRATWETILDGKRLPPFETFSQGPTLQFTLR 360
VFDKNRRLQLLDGEYEVAMQEMEECPISKKRATWETILDGKRLPPFETFSQGPTLQFTLR
Sbjct: 301 VFDKNRRLQLLDGEYEVAMQEMEECPISKKRATWETILDGKRLPPFETFSQGPTLQFTLR 360
Query: 361 WTGETNDKSTAPIAKPLATRNSESLHQENKPGSVKPTQTIAVKESLTTDLQTRKEKDTPN 420
WTGETNDKSTAPIAKPLATRNSESLHQENKPGSVKPTQTIAVKESLTTDLQTRKEKDTPN
Sbjct: 361 WTGETNDKSTAPIAKPLATRNSESLHQENKPGSVKPTQTIAVKESLTTDLQTRKEKDTPN 420
Query: 421 ENRQKLRIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCHSRFIFNYVY 480
ENRQKLRIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCHSRFIFNYVY
Sbjct: 421 ENRQKLRIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCHSRFIFNYVY 480
Query: 481 HPKGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNGPVKRTPITHILVCRPKRTKASM 540
HPKGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNGPVKRTPITHILVCRPKRTKASM
Sbjct: 481 HPKGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNGPVKRTPITHILVCRPKRTKASM 540
Query: 541 SEFLESEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQI 600
SEFLESEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQI
Sbjct: 541 SEFLESEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQI 600
Query: 601 EEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIKKNLCRNFMLHL 660
EEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIKKNLCRNFMLHL
Sbjct: 601 EEFSDVNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYGQKIIKKNLCRNFMLHL 660
Query: 661 VSMHDFNLISIMSIDKAVTKLREMQQKLEKGESASPANEEITEEQNGTANGFSEINSKEK 720
VSMHDFNLISIMSIDKAVTKLREMQQKLEKGESASPANEEITEEQNGTANGFSEINSKEK
Sbjct: 661 VSMHDFNLISIMSIDKAVTKLREMQQKLEKGESASPANEEITEEQNGTANGFSEINSKEK 720
Query: 721 ALETDSVSGVSKQSKKQKL 739
ALETDSVSGVSKQSKKQKL
Sbjct: 721 ALETDSVSGVSKQSKKQKL 739
>gi|239756770 PREDICTED: similar to KIAA0160 [Homo sapiens]
Length = 172
Score = 220 bits (560), Expect = 4e-57
Identities = 106/108 (98%), Positives = 106/108 (98%)
Query: 163 GFFHKNDKPSPNSENEQNSVTLEVLLVKVCHKKRKDVSCPIRQVPTGKKQVPLNPDLNQT 222
GFFHKNDKPSPNSENEQNSVTLEVLLVKVCHKKRKDV CPIRQVPTGKKQVPLNPDLNQT
Sbjct: 37 GFFHKNDKPSPNSENEQNSVTLEVLLVKVCHKKRKDVCCPIRQVPTGKKQVPLNPDLNQT 96
Query: 223 KPGNFPSLAVSSNEFEPSNSHMVKSYSLLFRVTRPGRREFNGMINGET 270
KPGNFPSLAVSSNEFEPSNSHMVKSYSLLFRVTRP RREFNGMINGET
Sbjct: 97 KPGNFPSLAVSSNEFEPSNSHMVKSYSLLFRVTRPRRREFNGMINGET 144
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 57.8 bits (138), Expect = 4e-08
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 18/79 (22%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAA-------VAAATASGGKSGGGSCGGG---------- 49
GGGG GG G S+G+GGGG GG AA+ SGG GG S GGG
Sbjct: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137
Query: 50 -GSYSASSSSSAAAAAGAA 67
GS S+SSSSS+++++ ++
Sbjct: 138 TGSSSSSSSSSSSSSSSSS 156
Score = 49.3 bits (116), Expect = 1e-05
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 6 HGGGGGGGSGPS------------AGSGGGGFGGSAAVAAAT---ASGGKSGGGSCGGGG 50
+GGGGGGG G S +G GGGG VA++T AS G S S
Sbjct: 91 NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
Query: 51 SYSASSSSSAAAAAG 65
S S+SSSSS++++ G
Sbjct: 151 SSSSSSSSSSSSSCG 165
Score = 38.9 bits (89), Expect = 0.017
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 15 GPSAGSGGGGF------GGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAV 68
GP A SG F +AA A T++GG GGG GGGG S + G+
Sbjct: 45 GPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Query: 69 LP 70
P
Sbjct: 105 NP 106
Score = 38.5 bits (88), Expect = 0.023
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 1 MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
+A +G GGGGG S GGG S + A+T S S S S S+SSSSS+
Sbjct: 108 LAAASNGSGGGGGG---I-SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
Score = 36.6 bits (83), Expect = 0.086
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 3 PQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAA 62
P+ + ++ GGGG GGS GG SG G GGGG ++ + + AA
Sbjct: 57 PEPIASAAAAAATVTSTGGGGGGGGSG------GGGGSSGNGGGGGGGGGGSNCNPNLAA 110
Query: 63 AAGAA 67
A+ +
Sbjct: 111 ASNGS 115
Score = 33.9 bits (76), Expect = 0.56
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 17 SAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
+ G GGGG G S G GGG GGGGS + ++A+ +G
Sbjct: 73 TGGGGGGGGSGGGG-----GSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 57.8 bits (138), Expect = 4e-08
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 18/79 (22%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAA-------VAAATASGGKSGGGSCGGG---------- 49
GGGG GG G S+G+GGGG GG AA+ SGG GG S GGG
Sbjct: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137
Query: 50 -GSYSASSSSSAAAAAGAA 67
GS S+SSSSS+++++ ++
Sbjct: 138 TGSSSSSSSSSSSSSSSSS 156
Score = 49.3 bits (116), Expect = 1e-05
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 6 HGGGGGGGSGPS------------AGSGGGGFGGSAAVAAAT---ASGGKSGGGSCGGGG 50
+GGGGGGG G S +G GGGG VA++T AS G S S
Sbjct: 91 NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
Query: 51 SYSASSSSSAAAAAG 65
S S+SSSSS++++ G
Sbjct: 151 SSSSSSSSSSSSSCG 165
Score = 38.9 bits (89), Expect = 0.017
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 15 GPSAGSGGGGF------GGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAV 68
GP A SG F +AA A T++GG GGG GGGG S + G+
Sbjct: 45 GPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Query: 69 LP 70
P
Sbjct: 105 NP 106
Score = 38.5 bits (88), Expect = 0.023
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 1 MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
+A +G GGGGG S GGG S + A+T S S S S S+SSSSS+
Sbjct: 108 LAAASNGSGGGGGG---I-SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
Score = 36.6 bits (83), Expect = 0.086
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 3 PQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAA 62
P+ + ++ GGGG GGS GG SG G GGGG ++ + + AA
Sbjct: 57 PEPIASAAAAAATVTSTGGGGGGGGSG------GGGGSSGNGGGGGGGGGGSNCNPNLAA 110
Query: 63 AAGAA 67
A+ +
Sbjct: 111 ASNGS 115
Score = 33.9 bits (76), Expect = 0.56
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 17 SAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
+ G GGGG G S G GGG GGGGS + ++A+ +G
Sbjct: 73 TGGGGGGGGSGGGG-----GSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 57.8 bits (138), Expect = 4e-08
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 18/79 (22%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAA-------VAAATASGGKSGGGSCGGG---------- 49
GGGG GG G S+G+GGGG GG AA+ SGG GG S GGG
Sbjct: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137
Query: 50 -GSYSASSSSSAAAAAGAA 67
GS S+SSSSS+++++ ++
Sbjct: 138 TGSSSSSSSSSSSSSSSSS 156
Score = 49.3 bits (116), Expect = 1e-05
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 6 HGGGGGGGSGPS------------AGSGGGGFGGSAAVAAAT---ASGGKSGGGSCGGGG 50
+GGGGGGG G S +G GGGG VA++T AS G S S
Sbjct: 91 NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
Query: 51 SYSASSSSSAAAAAG 65
S S+SSSSS++++ G
Sbjct: 151 SSSSSSSSSSSSSCG 165
Score = 38.9 bits (89), Expect = 0.017
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 15 GPSAGSGGGGF------GGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAV 68
GP A SG F +AA A T++GG GGG GGGG S + G+
Sbjct: 45 GPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Query: 69 LP 70
P
Sbjct: 105 NP 106
Score = 38.5 bits (88), Expect = 0.023
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 1 MAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
+A +G GGGGG S GGG S + A+T S S S S S+SSSSS+
Sbjct: 108 LAAASNGSGGGGGG---I-SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
Score = 36.6 bits (83), Expect = 0.086
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 3 PQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAA 62
P+ + ++ GGGG GGS GG SG G GGGG ++ + + AA
Sbjct: 57 PEPIASAAAAAATVTSTGGGGGGGGSG------GGGGSSGNGGGGGGGGGGSNCNPNLAA 110
Query: 63 AAGAA 67
A+ +
Sbjct: 111 ASNGS 115
Score = 33.9 bits (76), Expect = 0.56
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 17 SAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
+ G GGGG G S G GGG GGGGS + ++A+ +G
Sbjct: 73 TGGGGGGGGSGGGG-----GSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 57.4 bits (137), Expect = 5e-08
Identities = 30/55 (54%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 7 GGGGGGGSGPSAGSGGGGFG----GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GGGGGGG G G GGGG G G+ AVAAA A+ + GG GGGG Y SS+
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG--GGGGGYGGSSA 305
Score = 53.9 bits (128), Expect = 5e-07
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 7 GGGGGGGSGPSAGSGGGGFG--GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GG GGGG G AG+GG G G +AA AAA A+GG GGG G Y SS
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSS 312
Score = 50.8 bits (120), Expect = 4e-06
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 21/80 (26%)
Query: 7 GGGGGGGSGP------------------SAGSGGGGFGGSAAVAAATASGGKSGGGSC-- 46
GGGGGGG+G + G GGGG+GGS+A +S + GGG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG 323
Query: 47 -GGGGSYSASSSSSAAAAAG 65
GGGG+ S S +++ +AA G
Sbjct: 324 PGGGGAASLSKAAAGSAAGG 343
Score = 50.1 bits (118), Expect = 8e-06
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 12 GGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G S P AG GGGG GG SGG GGG G GG+ + + +++AAAAA AA
Sbjct: 242 GYSRPGAGGGGGGGGGGGG-----GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
Score = 34.7 bits (78), Expect = 0.33
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 11 GGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAVLP 70
GGG GP+A + GSAA A+ GG++G GG S +A+A AA P
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
Query: 71 VKKPKMEHVQADHE 84
M+ +Q HE
Sbjct: 220 ---GSMDPLQNSHE 230
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 57.4 bits (137), Expect = 5e-08
Identities = 30/55 (54%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 7 GGGGGGGSGPSAGSGGGGFG----GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GGGGGGG G G GGGG G G+ AVAAA A+ + GG GGGG Y SS+
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG--GGGGGYGGSSA 305
Score = 53.9 bits (128), Expect = 5e-07
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 7 GGGGGGGSGPSAGSGGGGFG--GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GG GGGG G AG+GG G G +AA AAA A+GG GGG G Y SS
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSS 312
Score = 50.8 bits (120), Expect = 4e-06
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 21/80 (26%)
Query: 7 GGGGGGGSGP------------------SAGSGGGGFGGSAAVAAATASGGKSGGGSC-- 46
GGGGGGG+G + G GGGG+GGS+A +S + GGG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG 323
Query: 47 -GGGGSYSASSSSSAAAAAG 65
GGGG+ S S +++ +AA G
Sbjct: 324 PGGGGAASLSKAAAGSAAGG 343
Score = 50.1 bits (118), Expect = 8e-06
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 12 GGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G S P AG GGGG GG SGG GGG G GG+ + + +++AAAAA AA
Sbjct: 242 GYSRPGAGGGGGGGGGGGG-----GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
Score = 34.7 bits (78), Expect = 0.33
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 11 GGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAVLP 70
GGG GP+A + GSAA A+ GG++G GG S +A+A AA P
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
Query: 71 VKKPKMEHVQADHE 84
M+ +Q HE
Sbjct: 220 ---GSMDPLQNSHE 230
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 57.4 bits (137), Expect = 5e-08
Identities = 30/55 (54%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 7 GGGGGGGSGPSAGSGGGGFG----GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GGGGGGG G G GGGG G G+ AVAAA A+ + GG GGGG Y SS+
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG--GGGGGYGGSSA 305
Score = 53.9 bits (128), Expect = 5e-07
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 7 GGGGGGGSGPSAGSGGGGFG--GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GG GGGG G AG+GG G G +AA AAA A+GG GGG G Y SS
Sbjct: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSS 312
Score = 50.8 bits (120), Expect = 4e-06
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 21/80 (26%)
Query: 7 GGGGGGGSGP------------------SAGSGGGGFGGSAAVAAATASGGKSGGGSC-- 46
GGGGGGG+G + G GGGG+GGS+A +S + GGG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG 323
Query: 47 -GGGGSYSASSSSSAAAAAG 65
GGGG+ S S +++ +AA G
Sbjct: 324 PGGGGAASLSKAAAGSAAGG 343
Score = 50.1 bits (118), Expect = 8e-06
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 12 GGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G S P AG GGGG GG SGG GGG G GG+ + + +++AAAAA AA
Sbjct: 242 GYSRPGAGGGGGGGGGGGG-----GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
Score = 34.7 bits (78), Expect = 0.33
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 11 GGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAVLP 70
GGG GP+A + GSAA A+ GG++G GG S +A+A AA P
Sbjct: 161 GGGGGPAAVPEFNNYYGSAAPASG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
Query: 71 VKKPKMEHVQADHE 84
M+ +Q HE
Sbjct: 220 ---GSMDPLQNSHE 230
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 56.2 bits (134), Expect = 1e-07
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 6 HGGGGGGGSGPSA---GSGGGGFGGSAAVAA--ATASGGKSGGGSCGGGGSYSASSSSSA 60
HGG GGG G + GS GGG+GG ++ ++SGG GG S GGGG Y SS
Sbjct: 491 HGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGG 550
Query: 61 AAAAG 65
+++ G
Sbjct: 551 SSSGG 555
Score = 52.8 bits (125), Expect = 1e-06
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 6 HGGGGGGG-SGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
HGG GG G S+G GGGG+GG ++ ++SGG GGGS GG S+S S +++
Sbjct: 522 HGGSSSGGYGGGSSGGGGGGYGGGSS-GGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSK 580
Query: 65 G 65
G
Sbjct: 581 G 581
Score = 52.4 bits (124), Expect = 2e-06
Identities = 26/59 (44%), Positives = 31/59 (52%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GGG GGGS SGGG GG + GG SGGGS GGG +SS +++G
Sbjct: 470 GGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG 528
Score = 50.1 bits (118), Expect = 8e-06
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 7 GGGGGGGSGPSAGSGGGGF-GGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
G GGG SG GS GG+ GGS+ GG SGGGS GGG SSS +++
Sbjct: 512 GYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSS 571
Query: 66 AAV 68
+V
Sbjct: 572 GSV 574
Score = 49.7 bits (117), Expect = 1e-05
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAA--VAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GGG G G S G GGG GGS+ ++ GG SGGG GG S SSS G
Sbjct: 474 GGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGG 533
Query: 66 AA 67
++
Sbjct: 534 SS 535
Score = 47.8 bits (112), Expect = 4e-05
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGG-----GGSYSASSSSSAA 61
G G GG G GS GGG+GG ++ GG SGGG GG GG Y SS +
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGG------GSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGS 508
Query: 62 AAAG 65
+ G
Sbjct: 509 SGGG 512
Score = 46.6 bits (109), Expect = 8e-05
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 6 HGGG---GGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAA 62
+GGG GG G S G GGG GG +SGG S G GGGS S SS++
Sbjct: 513 YGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSG 572
Query: 63 AAG 65
+ G
Sbjct: 573 SVG 575
Score = 45.1 bits (105), Expect = 2e-04
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGG-----------GGSYSAS 55
GGG GGGS SGGG GGS++ +S G GGGS GG GGS S
Sbjct: 496 GGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGG 555
Query: 56 SSSSAAAAAG 65
+++ G
Sbjct: 556 GYGGGSSSGG 565
Score = 43.9 bits (102), Expect = 5e-04
Identities = 28/60 (46%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
Query: 9 GGGGGSGPSAG-------SGGGGFGGSAAVAAATASGGKSGGGSCGG---GGSYSASSSS 58
GGGG G S G SGGG GG +SGG GGGS GG GG Y SSS
Sbjct: 460 GGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSS 519
Score = 42.7 bits (99), Expect = 0.001
Identities = 23/58 (39%), Positives = 26/58 (44%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GG GG G G GGG F GS ++ S G S GG GGGS+ S G
Sbjct: 68 GGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGG 125
Score = 41.6 bits (96), Expect = 0.003
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 5 KHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGG--GGSYSASSS 57
+ GGGGGGG G GG GG +++ +++ G GG S GG GGS+S SS
Sbjct: 15 RSGGGGGGG-------GCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSS 62
Score = 40.4 bits (93), Expect = 0.006
Identities = 30/77 (38%), Positives = 34/77 (44%), Gaps = 24/77 (31%)
Query: 7 GGGGGGGSG-----------PSAGSGGGGFGGSAAVAAATASGGKSGGGSCG-------- 47
GGGGGGG G S GS GGGF S + + S G SGGG G
Sbjct: 18 GGGGGGGCGGGGGVSSLRISSSKGSLGGGF-SSGGFSGGSFSRGSSGGGCFGGSSGGYGG 76
Query: 48 ----GGGSYSASSSSSA 60
GGGS+ S SS+
Sbjct: 77 LGGFGGGSFRGSYGSSS 93
Score = 40.4 bits (93), Expect = 0.006
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 6 HGGGGGGGSGPSAGS-GGGGFGGS--AAVAAATASGGKSGGGSCGGGG 50
+GG GG G G GS G FGGS + + GG GGGS GGGG
Sbjct: 74 YGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGG 121
Score = 39.7 bits (91), Expect = 0.010
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 7 GGGGGG------GSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GG GGG GS GS GG FGG + + GG GGG GGGG
Sbjct: 78 GGFGGGSFRGSYGSSSFGGSYGGSFGG-GSFGGGSFGGGSFGGGGFGGGG 126
Score = 36.6 bits (83), Expect = 0.086
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 6 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSAS 55
+GG GGGS GGG FGG GG GGG G GG S +
Sbjct: 98 YGGSFGGGSFGGGSFGGGSFGGGG--FGGGGFGGGFGGGFGGDGGLLSGN 145
Score = 35.4 bits (80), Expect = 0.19
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 33 AATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
+++ SGG GGG CGGGG S+ SS+ + G
Sbjct: 12 SSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLG 44
Score = 34.7 bits (78), Expect = 0.33
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGG 49
GG GGS GGG FGG + GG GGG GGG
Sbjct: 95 GGSYGGSFGGGSFGGGSFGG------GSFGGGGFGGGGFGGG 130
Score = 31.6 bits (70), Expect = 2.8
Identities = 15/34 (44%), Positives = 16/34 (47%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK 40
GGG GG G G GGGFGG SG +
Sbjct: 113 GGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNE 146
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 7 GGGGGGGSGPSAG-SGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GG GGG SG G SGGGG+ G ++ GG G G CGGG S S ++ G
Sbjct: 40 GGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGG 99
Query: 66 AA 67
+
Sbjct: 100 GS 101
Score = 50.1 bits (118), Expect = 8e-06
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 9 GGGGGSGPSAGSGGGGF----GGSAAVAAATASGGKSGGG----SCGGGGSYSASSSSSA 60
GGG G G S G GGGG GGS + GG SGGG S GGGGS SS
Sbjct: 61 GGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGG 120
Query: 61 AAAAGA 66
++ G+
Sbjct: 121 SSGGGS 126
Score = 49.7 bits (117), Expect = 1e-05
Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 2 APQKHGGGGGGGSGPSAGSG---GGGFGGSAAVAAATASGGK----SGGGS-CGGGGSYS 53
APQ GGG G G S GSG GG GGS+ ++ G SGGGS CGGG S
Sbjct: 220 APQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGG 279
Query: 54 ASSSSSAAAAAGAAVLPV 71
SS + +P+
Sbjct: 280 GGGGSSVGGSGSGKGVPI 297
Score = 49.3 bits (116), Expect = 1e-05
Identities = 28/62 (45%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 5 KHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASG-GKSGGGSCGGGGSYSASSSSSAAAA 63
K GGGGGG G S G G G FGG + ++ SG G SGGG GGG SS
Sbjct: 18 KTSGGGGGGGG-SGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
Query: 64 AG 65
G
Sbjct: 77 IG 78
Score = 49.3 bits (116), Expect = 1e-05
Identities = 23/60 (38%), Positives = 26/60 (43%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
GGGG GG G GGG GGS+ + GG GG CGGG S G+
Sbjct: 25 GGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGS 84
Score = 48.1 bits (113), Expect = 3e-05
Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 7 GGGGGGGSGPSA-GSGGGGFGGSAAVA---AATASGGKSGGGS-C----GGGGSYSASSS 57
GGGG G G SGGGGF G A +SGG SGGGS C GGGGS S
Sbjct: 132 GGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSG 191
Query: 58 SSAAAAAGAA 67
+ G++
Sbjct: 192 GGSGCGGGSS 201
Score = 47.4 bits (111), Expect = 5e-05
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 7 GGGGGGGSGPSAG--------SGGGGFGGSAAVAAATASGG----KSGGGSCGGGGSYSA 54
GGGGGGG G G SGGGG G + ++ GG SGGG GGGS
Sbjct: 70 GGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCF 129
Query: 55 SSSSSAAAAAGA 66
SS ++ G+
Sbjct: 130 SSGGGGSSGGGS 141
Score = 46.6 bits (109), Expect = 8e-05
Identities = 28/65 (43%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASS---SSSAAAA 63
GGGG G G S GGG G + +SGG SG S GGGGS S SS
Sbjct: 92 GGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGF 151
Query: 64 AGAAV 68
+G AV
Sbjct: 152 SGQAV 156
Score = 45.8 bits (107), Expect = 1e-04
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 6 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATAS------GGKSGGGSCGGGGSYSASSSSS 59
+ GGG G G S+G G G+ S V + + GG SGGG GG G +S+
Sbjct: 189 YSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGG 248
Query: 60 AAAAAGAA 67
++ G +
Sbjct: 249 SSGCGGGS 256
Score = 43.5 bits (101), Expect = 7e-04
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 7 GGGGGGGSGPSAGSGG-----GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAA 61
GGGGGG G GSGG GG G S + +SGG G GGG S S +
Sbjct: 71 GGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFS 130
Query: 62 AAAGAA 67
+ G +
Sbjct: 131 SGGGGS 136
Score = 42.0 bits (97), Expect = 0.002
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 9 GGGGGSGPSAG---SGGGGFGGSAA-------VAAATASGGKSG----GGSCGGGGSYSA 54
GGGG SG +G SGGGGF G A V++ +SGG SG GG G YS
Sbjct: 132 GGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSG 191
Query: 55 SSSSSAAAAAGAA 67
S ++G +
Sbjct: 192 GGSGCGGGSSGGS 204
Score = 42.0 bits (97), Expect = 0.002
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASS 56
GG GGGSG + GGGG +V + G GGGS GG GS SS
Sbjct: 167 GGSSGGGSGCFSSGGGGG-----SVCGYSGGGSGCGGGSSGGSGSGYVSS 211
Score = 40.4 bits (93), Expect = 0.006
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 17 SAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
++G GGGG GGS GG SGGGS G G YS S G +
Sbjct: 19 TSGGGGGG-GGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGS 68
Score = 39.3 bits (90), Expect = 0.013
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 20/79 (25%)
Query: 7 GGGGGGGSGPSA------------GSGGGGFGGSAAVAAATASGG-------KSGGGSCG 47
GGG GGGS S G GGG GG GG GGGS G
Sbjct: 39 GGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSG 98
Query: 48 GG-GSYSASSSSSAAAAAG 65
GG G +S+ S ++G
Sbjct: 99 GGSGCFSSGGGGSGCFSSG 117
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 52.8 bits (125), Expect = 1e-06
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Query: 6 HGGGGGGGSGPSAGSGGGGFGGSAAVAAAT-------ASGGKSGG-----------GSCG 47
HGGGGGGGS + G GGG GG A A +GG GG G G
Sbjct: 166 HGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGG 225
Query: 48 GGGSYSASSSSSAAAAAG-AAVLPV 71
GG + +A+++S AA AG AA+LP+
Sbjct: 226 GGKAAAAAAASFAAEQAGAAALLPL 250
Score = 48.1 bits (113), Expect = 3e-05
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 21/84 (25%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVA----------AATASGGKSGG-----------GS 45
GG GGGG G S+ +GGGG G S A + +GG GG G
Sbjct: 164 GGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGG 223
Query: 46 CGGGGSYSASSSSSAAAAAGAAVL 69
GGG + +A+++S AA AGAA L
Sbjct: 224 GGGGKAAAAAAASFAAEQAGAAAL 247
Score = 45.8 bits (107), Expect = 1e-04
Identities = 32/77 (41%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 5 KHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
K GG GGGG G GGGG G S A GG GG S GG S A S + A
Sbjct: 157 KVGGSGGGGHG-----GGGGGGSSNA-------GGGGGGASGGGANSKPAQKKSCGSKVA 204
Query: 65 GAAVLPVKKPKMEHVQA 81
G A V KP + + A
Sbjct: 205 GGAGGGVSKPHAKLILA 221
Score = 32.7 bits (73), Expect = 1.2
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAV 68
GGGGG +A + A AA G + S + SAS+S+S+AA+A AA+
Sbjct: 222 GGGGGGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAAL 281
Score = 30.8 bits (68), Expect = 4.7
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 20 SGGGGFGGSAAVAAATASGGKSGGGS-------CGGGGSYSASSSSSAAAAAGAAVLPVK 72
SG SAA ++ G GGS GGGGS +A A+ GA P +
Sbjct: 136 SGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQ 195
Query: 73 K 73
K
Sbjct: 196 K 196
Score = 30.4 bits (67), Expect = 6.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
G S P+AG G A++ AA+ + + + S+S+SSSSS ++++
Sbjct: 341 GRSSAASSPAAGRSPADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSS 397
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 3 PQKHGGGGGGGS------------------GPSAGSGGGGFGGSA-AVAAATASGGKSGG 43
P GGGGGGG GP G GG G S AVAAA A+ G SG
Sbjct: 13 PGTTGGGGGGGRRGLGGAPRQRVPALLLPPGPPVGGGGPGAPPSPPAVAAAAAAAGSSGA 72
Query: 44 GSCGGGGSYSASSSSSAAAAAGAAVLPVKKPKMEHVQADHELFLQ 88
G GG + SA+SSSSA++++ ++ P + V + LQ
Sbjct: 73 GVPGGAAAASAASSSSASSSSSSSSSASSGPALLRVGPGFDAALQ 117
Score = 30.0 bits (66), Expect = 8.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 15/76 (19%)
Query: 8 GGGGGGSGPS----------AGSGGGGFGG-----SAAVAAATASGGKSGGGSCGGGGSY 52
GGGG G+ PS AGS G G G SAA +++ +S S + G
Sbjct: 47 GGGGPGAPPSPPAVAAAAAAAGSSGAGVPGGAAAASAASSSSASSSSSSSSSASSGPALL 106
Query: 53 SASSSSSAAAAAGAAV 68
AA AA+
Sbjct: 107 RVGPGFDAALQVSAAI 122
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 52.4 bits (124), Expect = 2e-06
Identities = 25/58 (43%), Positives = 29/58 (50%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GG GG G +GSGGG GG + SGG GG S G GG+Y S S + G
Sbjct: 514 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Score = 51.6 bits (122), Expect = 3e-06
Identities = 28/53 (52%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAA-VAAATASGGKSGGGSCGGGGSYSASSSS 58
G GGG G G S GSGGG GGS + SGG SGGG GG GS S S
Sbjct: 533 GYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGS 585
Score = 51.2 bits (121), Expect = 3e-06
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 7 GGGGGGGSGPSAGSGG--GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
GGG GGGSG GSGG GG GS + GG GG S G GG +S S + +
Sbjct: 503 GGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGS 562
Query: 65 GA 66
G+
Sbjct: 563 GS 564
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGS---YSASSSS 58
G GGG G G GSGGG GGS + SGG GGGS GGGS Y S S
Sbjct: 525 GSGGGSGGGYGGGSGGGHSGGSGG-GHSGGSGGNYGGGSGSGGGSGGGYGGGSGS 578
Score = 47.8 bits (112), Expect = 4e-05
Identities = 25/62 (40%), Positives = 29/62 (46%)
Query: 6 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
+G G GGSG S G GG G G + SGG GGGS GGGS S +G
Sbjct: 485 YGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSG 544
Query: 66 AA 67
+
Sbjct: 545 GS 546
Score = 47.8 bits (112), Expect = 4e-05
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGS-AAVAAATASGGKSGGGSCGG-GGSYSASSSSSAAAAA 64
G GGGGSG G G G GGS + + SGG SGGG GG GG +S S + +
Sbjct: 495 GSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGS 554
Query: 65 G 65
G
Sbjct: 555 G 555
Score = 47.0 bits (110), Expect = 6e-05
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGG---GGSYSASSSSSAA 61
GG GGGSG GSGGG GGS + SGG GGGS G GGSY +S +
Sbjct: 555 GGNYGGGSGSGGGSGGGYGGGSGSRGG---SGGSHGGGSGFGGESGGSYGGGEEASGS 609
Score = 46.2 bits (108), Expect = 1e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 7 GGGGGGGSGPSAGSGG--GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSS 59
GGG GGGSG GSGG GG G + + GG+ GS GG G S SS S
Sbjct: 569 GGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS 623
Score = 44.7 bits (104), Expect = 3e-04
Identities = 31/65 (47%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 5 KHGGGGGGGSGPSAGSGG-GGFGGSAAVAAATASGGKSGGGS---CGGGGSYSASSSSSA 60
K G GG GGSG S G G GG GGS SGG GGGS G GGSY S S
Sbjct: 472 KIGLGGRGGSGGSYGRGSRGGSGGS---YGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGG 528
Query: 61 AAAAG 65
+ G
Sbjct: 529 GSGGG 533
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKS---------GGGSCGG-GGSYSASSSS 58
GGG G G SA S GGGFGG + + GG S GGGS GG GG Y +
Sbjct: 74 GGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGG 133
Query: 59 SAAAAAGA 66
GA
Sbjct: 134 FGGFGGGA 141
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/75 (41%), Positives = 35/75 (46%), Gaps = 16/75 (21%)
Query: 7 GGGGGG--------GSGPSA--GSGGGGF------GGSAAVAAATASGGKSGGGSCGGGG 50
GGGGGG G G S G GGGG GGS +A++ GG GGGS G GG
Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGG 99
Query: 51 SYSASSSSSAAAAAG 65
+ SSS G
Sbjct: 100 ASGGGYSSSGGFGGG 114
Score = 42.0 bits (97), Expect = 0.002
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Query: 7 GGGGGGGSGPS--------AGSGGGGFGGSAAVAAATASG-----GKSGGGSCG------ 47
GGGGG GSG S + SGGGG GG + ++ G G+ GGGS G
Sbjct: 17 GGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGG 76
Query: 48 GGGSYSASS 56
GG +SASS
Sbjct: 77 SGGGFSASS 85
Score = 42.0 bits (97), Expect = 0.002
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCG---GGGSYSASSSSSAAAA 63
GG GG G +G G GG GS + + GG GG G GGGS S S
Sbjct: 491 GGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGH 550
Query: 64 AGAA 67
+G +
Sbjct: 551 SGGS 554
Score = 40.8 bits (94), Expect = 0.005
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 18/79 (22%)
Query: 5 KHGGGGGGGSGP------------SAGSGGGG--FGGSAAVAAATAS-GGKSGGGSCG-- 47
+ GGGGGGG G S+G GGGG F S+ ++ G+ GGGS G
Sbjct: 13 RSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYS 72
Query: 48 -GGGSYSASSSSSAAAAAG 65
GGGS S+SS G
Sbjct: 73 YGGGSGGGFSASSLGGGFG 91
Score = 40.4 bits (93), Expect = 0.006
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 7 GGGGGGGSGPSAGSGG--GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
G GG G G GSGG GG G + S G SGG GG GS S +
Sbjct: 480 GSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSG 539
Query: 65 G 65
G
Sbjct: 540 G 540
Score = 39.7 bits (91), Expect = 0.010
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 7 GGGGGGGSGP-SAGSGGGGFGGSAAVAAATASGGKSGGG--SCGGGGSYSASSSSSA 60
G GGG G G S G GG GG + SGG GGG + G GG Y S S+
Sbjct: 567 GSGGGYGGGSGSRGGSGGSHGGGSGFGG--ESGGSYGGGEEASGSGGGYGGGSGKSS 621
Score = 37.0 bits (84), Expect = 0.066
Identities = 26/64 (40%), Positives = 26/64 (40%), Gaps = 13/64 (20%)
Query: 7 GGGGGGGSGPSAGSGG-----GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAA 61
GG GGG G SGG GGFGG GG SGGG GG GS
Sbjct: 88 GGFGGGSRGFGGASGGGYSSSGGFGG--------GFGGGSGGGFGGGYGSGFGGFGGFGG 139
Query: 62 AAAG 65
A G
Sbjct: 140 GAGG 143
Score = 36.6 bits (83), Expect = 0.086
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 7 GGGGGGGSGPSAGSGG-------GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSS 59
GG GGG S G GG GGFGG + GG GG G GG +A+ S+
Sbjct: 98 GGASGGGYSSSGGFGGGFGGGSGGGFGGGYG-SGFGGFGGFGGGAGGGDGGILTANEKST 156
Score = 34.3 bits (77), Expect = 0.43
Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 10/48 (20%)
Query: 6 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYS 53
HGGG G G G S GS GGG A+ SGG GGGS G S+S
Sbjct: 586 HGGGSGFG-GESGGSYGGG-------EEASGSGGGYGGGS--GKSSHS 623
>gi|194018511 keratin 77 [Homo sapiens]
Length = 578
Score = 51.2 bits (121), Expect = 3e-06
Identities = 27/60 (45%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATA---SGGKSGGGSCGGGGSYSASSSSSAAAA 63
GGGG GSG G GGG+GG + A SGG G G GGGGSY S S ++
Sbjct: 501 GGGGSYGSGGYGGGSGGGYGGGRSYRGGGARGRSGGGYGSGCGGGGGSYGGSGRSGRGSS 560
Score = 35.4 bits (80), Expect = 0.19
Identities = 17/41 (41%), Positives = 18/41 (43%)
Query: 10 GGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
G SG G G GGFGG + G GGG GG G
Sbjct: 76 GRSTSGFCQGGGVGGFGGGRGFGVGSTGAGGFGGGGFGGAG 116
Score = 35.0 bits (79), Expect = 0.25
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 15/109 (13%)
Query: 7 GGGGGG-----GSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAA 61
GG GGG GS + G GGGGFGG+ + GG G C GG + + S
Sbjct: 89 GGFGGGRGFGVGSTGAGGFGGGGFGGAGFGTSNFGLGG--FGPYCPPGGIQEVTINQSLL 146
Query: 62 AAAGAAVLP----VKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLI 106
V P +K + E + + F +K RFL +N +
Sbjct: 147 EPLHLEVDPEIQRIKTQEREQIMVLNNKFASFIDK----VRFLEQQNQV 191
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 51.2 bits (121), Expect = 3e-06
Identities = 26/50 (52%), Positives = 27/50 (54%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASS 56
GGG GGG G SGGGG GG G SGGG GGGG Y+ SS
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSS 236
Score = 39.7 bits (91), Expect = 0.010
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 4 QKHGGGGGGGSGPSAGSGGGGFG-GSAAVAAATASGGKSGGGSCGG 48
Q GG G GGSG G GGGG+ S GG+ G G GG
Sbjct: 211 QDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGG 256
Score = 38.1 bits (87), Expect = 0.030
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 3 PQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGG-----SCGGGGS 51
PQ +G S G GGGG G ++ +SGG SGGG GGGGS
Sbjct: 152 PQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGS 205
Score = 37.0 bits (84), Expect = 0.066
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GG G GG G G GG+GG + GG+ G S GGGG
Sbjct: 379 GGNGRGGRGRGGPMGRGGYGGGGS-----GGGGRGGFPSGGGGG 417
Score = 33.5 bits (75), Expect = 0.73
Identities = 19/52 (36%), Positives = 24/52 (46%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
G G + ++ SGGGG GG S SGGGS GG G+ S +
Sbjct: 154 GYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGS 205
Score = 32.0 bits (71), Expect = 2.1
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 7/29 (24%)
Query: 3 PQKHGGGGGGGSG-------PSAGSGGGG 24
P GG GGGGSG PS G GGGG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGGGGG 419
Score = 31.6 bits (70), Expect = 2.8
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 7 GGGGGGGSGPSAGSG------GGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSS 59
GGGGGGG + G GGG GG + + G GG G + + +S
Sbjct: 224 GGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNS 282
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 51.2 bits (121), Expect = 3e-06
Identities = 33/68 (48%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK--SGGGSCGG---GGSYSA--SSSSS 59
G G GGGSG GSGGG GGS + + GGK SGGGS GG GG Y + SSS
Sbjct: 562 GYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSS 621
Query: 60 AAAAAGAA 67
++G A
Sbjct: 622 VKGSSGEA 629
Score = 49.3 bits (116), Expect = 1e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G GGG G S GG G GG + + GG S GG G GG S+S S+ A G++
Sbjct: 574 GSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAFGSS 633
Query: 68 V 68
V
Sbjct: 634 V 634
Score = 48.1 bits (113), Expect = 3e-05
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 7 GGGGGGGSGPSAGSG-GGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GG GGGGS G G GGG GG + G SGGG GGG +S+ S +++G
Sbjct: 550 GGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSG 609
Score = 45.4 bits (106), Expect = 2e-04
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATA-SGGKSGGGSCGGG 49
GGGGG G+ G GGGFGG ++ + SGG GGG GGG
Sbjct: 78 GGGGGFGAAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGG 121
Score = 42.7 bits (99), Expect = 0.001
Identities = 28/79 (35%), Positives = 30/79 (37%), Gaps = 20/79 (25%)
Query: 5 KHGGGGGGGSGPSAGS------------------GGGGFGGSAAVAAATASGGKSGGGSC 46
+HGGGGGG G GS GGGGFG AA GG GG S
Sbjct: 45 RHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFG--AAGGFGGRGGGFGGGSSF 102
Query: 47 GGGGSYSASSSSSAAAAAG 65
GGG +S G
Sbjct: 103 GGGSGFSGGGFGGGGFGGG 121
Score = 42.0 bits (97), Expect = 0.002
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
G GGSG GGG+G SGG S GGS GGG S S+ +
Sbjct: 547 GSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGS 602
Score = 40.4 bits (93), Expect = 0.006
Identities = 22/59 (37%), Positives = 25/59 (42%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
G G G +GS GG GG + SGG SGG GGGS S S + G
Sbjct: 535 GSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGG 593
Score = 39.7 bits (91), Expect = 0.010
Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 16/109 (14%)
Query: 8 GGGGGGSGPSAGSGG------GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAA 61
GGG G SG G GG GGFGG V GG GG GG + S + S
Sbjct: 103 GGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGGY--PGGIHEVSVNQSLL 160
Query: 62 AAAGAAVLP----VKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLI 106
V P VK + E ++ + F +K RFL +N +
Sbjct: 161 QPLNVKVDPEIQNVKAQEREQIKTLNNKFASFIDK----VRFLEQQNQV 205
Score = 39.7 bits (91), Expect = 0.010
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAA----ATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
GG GG G S SGGG GS++ + + + GG GGGS GGG S S +
Sbjct: 519 GGSGGRGSS--SGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSG 576
Query: 65 GAA 67
G +
Sbjct: 577 GGS 579
Score = 37.4 bits (85), Expect = 0.051
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 9 GGGGGSGPSAGSGG-----GG---FGGSAAVAAATASGGKSGGGSCGGGG 50
GGGGG G + G GG GG FGG + + GG GGG GG G
Sbjct: 78 GGGGGFGAAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFG 127
Score = 37.0 bits (84), Expect = 0.066
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 7 GGGGGGGSGPSAGS---GGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSAS 55
GGGGGG G S+GS GG +++ + + GG GGG GGGG S S
Sbjct: 13 GGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGG--GGGGFGGGGFGSRS 62
Score = 31.2 bits (69), Expect = 3.6
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Query: 5 KHGGGGG--GGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGS 45
KH GGG GGS G G GG GGS++V S G++ G S
Sbjct: 595 KHSSGGGSRGGSSSGGGYGSGG-GGSSSV---KGSSGEAFGSS 633
Score = 30.8 bits (68), Expect = 4.7
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 28 SAAVAAATASGGKSGGGSCGGGGSYSASSS 57
S+ VA+ A GG G GS GGG S SSS
Sbjct: 509 SSNVASKAAFGGSGGRGSSSGGGYSSGSSS 538
Score = 30.4 bits (67), Expect = 6.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 17 SAGSGGGG-----FGGSAAVAAATASGGKSGG--GSCGGGGSYSASSSSSAAAAAG 65
+A G GG GG ++ +++ SGG+ G G GGGGS S S + G
Sbjct: 516 AAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGG 571
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 50.8 bits (120), Expect = 4e-06
Identities = 28/52 (53%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSS 58
GGGGGGGSG S G GG G GG A + SG G SCGG S S S S
Sbjct: 2292 GGGGGGGSGGSGGGGGSGGGG----APSGGSGHSGGPSSCGGAPSTSRSRPS 2339
Score = 40.4 bits (93), Expect = 0.006
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 17 SAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAVLPVKKPK 75
S G GGGG GGS GG GGG+ GG +S SS A + + P + P+
Sbjct: 2291 SGGGGGGGSGGSG------GGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQ 2343
Score = 32.7 bits (73), Expect = 1.2
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 33/200 (16%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAA----- 62
G GG + P+A SG AAA ++ G GG G G +A + AA
Sbjct: 3 GSSGGAAAPAASSGP---------AAAASAAGSGCGGGAGEGAEEAAKDLADIAAFFRSG 53
Query: 63 ------AAGAAVLPVKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLT 116
VLP+ K K+ ++ + P + + I L R ++
Sbjct: 54 FRKNDEMKAMDVLPILKEKVAYLSGGRD----KRGGPILTFPARSNHDRIRQEDLRRLIS 109
Query: 117 YMSHRNSRTNIKRK-TFKVDDMLSKVEKMKG----EQESHSLSAHLQLTF--TGFFHK-- 167
Y++ S KR T VD SK + +K QES H+ L F+ K
Sbjct: 110 YLACIPSEEVCKRGFTVIVDMRGSKWDSIKPLLKILQESFPCCIHVALIIKPDNFWQKQR 169
Query: 168 NDKPSPNSENEQNSVTLEVL 187
+ S E E N V+LE L
Sbjct: 170 TNFGSSKFEFETNMVSLEGL 189
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 50.4 bits (119), Expect = 6e-06
Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 3 PQKHGGGGGGGSGPSAGSGGGGFGGSAAVAA------ATASGGKSGGGSCGGGGSYSASS 56
P GGGGGGG G SA GG GG A+V A A++SGG GG GG G A +
Sbjct: 25 PGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGT 84
Query: 57 S 57
S
Sbjct: 85 S 85
Score = 43.9 bits (102), Expect = 5e-04
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 8 GGGGGGSG---------PSAGSGGGGFG-GSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
GGG GGSG P G GGGG G G +A GGK+ G+ GGG S+S
Sbjct: 8 GGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGG 67
Query: 58 SSAAAAAGAA 67
+ G +
Sbjct: 68 GPGGSGGGGS 77
Score = 43.5 bits (101), Expect = 7e-04
Identities = 22/63 (34%), Positives = 27/63 (42%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
GGGGGG G G G GG+ A+ + G G S GGG + S AG +
Sbjct: 26 GGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTS 85
Query: 68 VLP 70
P
Sbjct: 86 FPP 88
Score = 38.1 bits (87), Expect = 0.030
Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 13 GSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G GPS GGG GGS A T+S + GGG GGGG S+S G A
Sbjct: 3 GGGPS----GGGPGGSGR--ARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKA 51
Score = 33.1 bits (74), Expect = 0.95
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GGG G GP GSG A GG GGS G G +S A G
Sbjct: 3 GGGPSGGGPG-GSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGG 59
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 11 GGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAV 68
GGG GG G G A ++ GG GGG G GGS S + A+ A+
Sbjct: 3 GGGPSG----GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAM 56
Score = 30.8 bits (68), Expect = 4.7
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 7 GGGGGGGS--GPSAGSGGGGFGGSAAVAAATASGGKSGGGS 45
GGG G S G GSGGGG GG A + G K G S
Sbjct: 57 GGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDS 97
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 50.1 bits (118), Expect = 8e-06
Identities = 31/78 (39%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 5 KHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSA----SSSSSA 60
K GGGGGGG G G G GG + A GG GGG GGGG +A SA
Sbjct: 9 KGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISA 68
Query: 61 AAAAGAAVLPVKKPKMEH 78
+ A A P P H
Sbjct: 69 ISEAAAQYNPEPPPPRTH 86
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 50.1 bits (118), Expect = 8e-06
Identities = 31/78 (39%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 5 KHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSA----SSSSSA 60
K GGGGGGG G G G GG + A GG GGG GGGG +A SA
Sbjct: 9 KGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISA 68
Query: 61 AAAAGAAVLPVKKPKMEH 78
+ A A P P H
Sbjct: 69 ISEAAAQYNPEPPPPRTH 86
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 7 GGGGGGGSGPSA--------GSGGGGFGGSAAVAAATASGGKSGG--GSCGGGGSYSASS 56
GGGGG GSG S+ GSGGGG GG + + +S G GG GS GGGG + +
Sbjct: 520 GGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYG 579
Query: 57 SSSAA 61
S S++
Sbjct: 580 SGSSS 584
Score = 49.7 bits (117), Expect = 1e-05
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 6 HGGGGGGGSGPSAGSG-------GGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSS 58
+G GGGGG S GSG GG GG + SGG S GGS GG GS S S
Sbjct: 566 YGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKS 625
Query: 59 SAAAAA 64
S +++
Sbjct: 626 SGGSSS 631
Score = 49.3 bits (116), Expect = 1e-05
Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 7 GGGGGGG------SGPSAGSGGG--GFGGSAAVAAATASGGKSGG--GSCGGGGSYSASS 56
GGGGGGG G S GSGGG G GG + SG SGG G GGGG S+
Sbjct: 542 GGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGG 601
Query: 57 SSSAAAAAGAAV 68
S ++G ++
Sbjct: 602 RGSGGGSSGGSI 613
Score = 48.5 bits (114), Expect = 2e-05
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGG-------GGSYSASSSSS 59
GGG GGG G GGGGFGG + GG GGG GG GG + + S
Sbjct: 101 GGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPPGGIQEVTINQS 160
Query: 60 AAAAAGAAVLP----VKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTL 115
+ P VK + E +++ + F +K RFL +N + + L
Sbjct: 161 LLQPLNVEIDPEIQKVKSREREQIKSLNNQFASFIDK----VRFLEQQNQV--LQTKWEL 214
Query: 116 TYMSHRNSRTNIKRKTFK--VDDMLSKVEKMKGEQ 148
++RT+ F+ ++++ +V+++K +Q
Sbjct: 215 LQQVDTSTRTHNLEPYFESFINNLRRRVDQLKSDQ 249
Score = 48.5 bits (114), Expect = 2e-05
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
GGGGG GS S S GG GGS ++ G SGGGS GG SSS ++ G+
Sbjct: 570 GGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGS 629
Query: 67 A 67
+
Sbjct: 630 S 630
Score = 48.1 bits (113), Expect = 3e-05
Identities = 26/59 (44%), Positives = 31/59 (52%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G GGGS S G GGGG G + ++ SGG S G GGGG S S SS+ G +
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGS 591
Score = 47.0 bits (110), Expect = 6e-05
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 7 GGGGGGGSGPSAGSGGGGF---GGSAAVAAATASGGK---SGGGSCGGGGSYSASSSSSA 60
GGGG G G S GSGGG + GG + SGG SGGGS G GG S +
Sbjct: 521 GGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGS 580
Query: 61 AAAAG 65
+++G
Sbjct: 581 GSSSG 585
Score = 45.4 bits (106), Expect = 2e-04
Identities = 23/44 (52%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GGG GGG G GGGGFGG + G SGGG GGGG
Sbjct: 91 GGGYGGGGFGGGGFGGGGFGG-GGIGGGGFGGFGSGGGGFGGGG 133
Score = 45.1 bits (105), Expect = 2e-04
Identities = 25/57 (43%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GGG GSG G GGGGFGG GG GGG GGGG S G
Sbjct: 83 GGGRGSGFGGGYGGGGFGGGG------FGGGGFGGGGIGGGGFGGFGSGGGGFGGGG 133
Score = 44.3 bits (103), Expect = 4e-04
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GGG GG G GSGG + GS + + GG G GS G GGS S S + G
Sbjct: 514 GGGSRGGGGGGYGSGGSSY-GSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGG 571
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 4 QKHGGGGG-----GGSGPSAGSGGG-------GFGGSAAVAAATASGGKSGGGSCG--GG 49
++ GGGGG GG G S G+GGG GGS +++ + A GG G G G GG
Sbjct: 37 RRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGG 96
Query: 50 GSYSASSSSSAAAAAG 65
G + G
Sbjct: 97 GGFGGGGFGGGGFGGG 112
Score = 41.2 bits (95), Expect = 0.004
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSS 59
GGGGGGS GSGGG GGS G S GG GGS S S+
Sbjct: 592 GGGGGGSSGGRGSGGGSSGGSIG------GRGSSSGGVKSSGGSSSVKFVST 637
Score = 35.4 bits (80), Expect = 0.19
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 14 SGPSAGSGGGGFGGSAAVAAATASGG-KSGGGSCGGGGSYSASSSS 58
SG + GGGG GS + + G SGGG GG GSY + SS
Sbjct: 513 SGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSS 558
Score = 32.0 bits (71), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 17 SAGSGGGGFGGSAAVAAAT--ASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
S G GG GG ++ + GG G G GGGG S S S+ + G +
Sbjct: 513 SGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGS 565
Score = 31.2 bits (69), Expect = 3.6
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 15 GPSAGSGGGGFGGSAAVAAATASGGKSGGG-SCGGGGSYSASSSSSAAAAAGA 66
G S G GGGG+G + S G GG GGGG S S ++ G+
Sbjct: 515 GGSRGGGGGGYGSGGS------SYGSGGGSYGSGGGGGGGRGSYGSGGSSYGS 561
Score = 30.0 bits (66), Expect = 8.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 28 SAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
+ +V+ +T+ SGGGS GGGG S SS + G+
Sbjct: 500 NVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGS 538
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 49.7 bits (117), Expect = 1e-05
Identities = 23/43 (53%), Positives = 23/43 (53%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GGGGGG G G GGGG GG GG GGG GGGG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGG 381
Score = 45.4 bits (106), Expect = 2e-04
Identities = 21/46 (45%), Positives = 22/46 (47%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSY 52
GGGGGGG G GGGG+GG GG G G G G Y
Sbjct: 348 GGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDY 393
Score = 45.4 bits (106), Expect = 2e-04
Identities = 22/59 (37%), Positives = 23/59 (38%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
GGGGGGG G G G GGF G GG+ G G G G Y G
Sbjct: 369 GGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGGG 427
Score = 44.3 bits (103), Expect = 4e-04
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GGGGGG G G G GG+GG GG GGG GGGG
Sbjct: 341 GGGGGGRGGGGGGGGRGGWGG----GGGGWGGGGGGGGGWGGGG 380
Score = 43.5 bits (101), Expect = 7e-04
Identities = 22/47 (46%), Positives = 22/47 (46%)
Query: 4 QKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
QK GGGG G G GGGG GG GG GG GGGG
Sbjct: 326 QKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGG 372
Score = 43.1 bits (100), Expect = 0.001
Identities = 21/44 (47%), Positives = 21/44 (47%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GGGG GG G G GG G GG GG GGG G GG
Sbjct: 343 GGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGG 386
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/44 (47%), Positives = 22/44 (50%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GGG GGG G G GGGG GG GG+ G G GG G
Sbjct: 363 GGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYG 406
Score = 42.0 bits (97), Expect = 0.002
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSY 52
GGGGG G G G GG GG GG GGG GG G +
Sbjct: 342 GGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGF 387
Score = 42.0 bits (97), Expect = 0.002
Identities = 21/43 (48%), Positives = 21/43 (48%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
GGGGGG G G GGGG GG GG G G GG G
Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRG 409
Score = 41.6 bits (96), Expect = 0.003
Identities = 23/51 (45%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 7 GGGGGGGSGPSAGSGG-----GGFGGSAAVAAATASGGKSGGGSCGGGGSY 52
GGGGGGG G G GG GG GG GG G G GG G Y
Sbjct: 349 GGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGY 399
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/46 (43%), Positives = 20/46 (43%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSY 52
GGGGGG G G GG G GG G G G GG G Y
Sbjct: 360 GGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGY 405
Score = 39.7 bits (91), Expect = 0.010
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 20/66 (30%)
Query: 7 GGGGGGGSGPSAGSGGGG----------FGGSAAVAAATASGGK----------SGGGSC 46
G GGGGG G G GGGG +GG GG+ GGG
Sbjct: 365 GWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGG 424
Query: 47 GGGGSY 52
GGGG Y
Sbjct: 425 GGGGGY 430
Score = 31.2 bits (69), Expect = 3.6
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 3/20 (15%)
Query: 6 HGGGGGGGSGPSAGSGGGGF 25
+GGGGGGG G G GGGG+
Sbjct: 414 YGGGGGGGGG---GGGGGGY 430
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 49.3 bits (116), Expect = 1e-05
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 3 PQKHGGGGGGGSG-PSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAA 61
P GG G + PS G+ GGG GG + A A+G GG G GG+ +A+++++AA
Sbjct: 192 PDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAA 251
Query: 62 AAAGAA 67
AAA AA
Sbjct: 252 AAAAAA 257
Score = 38.5 bits (88), Expect = 0.023
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGG 50
G G GG G G GG +AA AAA A+ + GG GG
Sbjct: 225 GAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGG 268
Score = 38.1 bits (87), Expect = 0.030
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 7 GGGGGGGSGPS-------AGSGGGGF----GGSAAVAAATASGGKSGGGSCGGG 49
G GGGG GPS AG GG G GG+AA AAA A+ + + GG
Sbjct: 209 GANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGG 262
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 48.9 bits (115), Expect = 2e-05
Identities = 24/52 (46%), Positives = 25/52 (48%)
Query: 6 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSS 57
H GGG G G GSGGG G A GG SGGGS GG SS+
Sbjct: 475 HRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSSN 526
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/50 (44%), Positives = 25/50 (50%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSS 58
GGG GSG + G GGG G A GG S GG G G +S SS+
Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSSN 526
Score = 43.5 bits (101), Expect = 7e-04
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 11 GGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSA 60
GGGSG S G+GGG GGS + +GG GG S GG G+ S S+
Sbjct: 477 GGGSG-SGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSS 525
Score = 34.7 bits (78), Expect = 0.33
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 16 PSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
P+A + +AA +A GG SG G GGG + S A G
Sbjct: 455 PAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGG 504
Score = 33.5 bits (75), Expect = 0.73
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 14 SGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAG 65
S +A + +AAV+A GG GG+ GG G S S A G
Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGG 505
Score = 32.0 bits (71), Expect = 2.1
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 17 SAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
SA GGG G A GG SGGGS GGG A ++ G+
Sbjct: 472 SAVHRGGGSGSGGA-------GGGSGGGSGSGGGGGGAGGGGGGSSGGGS 514
Score = 30.8 bits (68), Expect = 4.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 28 SAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
+AA AAA ++ + GG GG G S S S GA
Sbjct: 464 AAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGA 502
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 48.9 bits (115), Expect = 2e-05
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGS 51
GGGGGG G S G GG G G S+A +GG + +CGGG +
Sbjct: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAA 62
Score = 47.4 bits (111), Expect = 5e-05
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 7 GGGGGGG----SGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAA 62
GGG GG SG G+GGGG GGS++ AAT++ S + + +A+++ + A
Sbjct: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
Query: 63 AAGAA 67
+ GAA
Sbjct: 190 SVGAA 194
Score = 41.2 bits (95), Expect = 0.004
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAA 67
G GG G + G GGGG S A +A A+ + + + +A + + + AAGAA
Sbjct: 138 GDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
Score = 33.5 bits (75), Expect = 0.73
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 23/116 (19%)
Query: 22 GGGFGGSAAVAAATASGGKSGGGSCGGGGSYS--------ASSSSSAAAAAGAAVLPVKK 73
GGG GG GG SGGG G GG YS A +++AAA G A L +
Sbjct: 19 GGGGGG----------GGSSGGGG-GAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLP 67
Query: 74 PKMEHVQADHELFLQAFEKPTQIYRFLRTRNLI--APIFLHRTLTYMSHRNSRTNI 127
P Q+ L A + + + F R P + R + Y S S I
Sbjct: 68 P--GKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREI 121
Score = 33.5 bits (75), Expect = 0.73
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
GGGGG G G S+ G G A AAA A GG + G G + S S AA A
Sbjct: 29 GGGGGAGGGYSSACRPGPRAGGA--AAAAACGGGAALGLLPPGKTQSPESLLDIAARRVA 86
Query: 67 AVLPVKK 73
P ++
Sbjct: 87 EKWPFQR 93
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 48.1 bits (113), Expect = 3e-05
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 9 GGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYS 53
GG GG GP G+ GGG+GG GG GGG+ GGGG+Y+
Sbjct: 287 GGYGGGGPGYGNQGGGYGGGGGYDGYN-EGGNFGGGNYGGGGNYN 330
Score = 39.7 bits (91), Expect = 0.010
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 8 GGGGGGSGPSAGSGG-GGFGGSAAVAAATASGGKSG-------GGSCGGGGSYSA 54
GGGGG G GG GG+GG + + GG G GG+ GGG YS+
Sbjct: 231 GGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSS 285
Score = 37.4 bits (85), Expect = 0.051
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 6 HGGGGGGGSGPSAGSGGG--GFGGSAAVAAATASGGKSGGGSCGGGGSY 52
+GGGGGG G G GG GFGG G S GG GGG Y
Sbjct: 249 YGGGGGGSRGSYGGGDGGYNGFGGDGGNYGG-GPGYSSRGGYGGGGPGY 296
Score = 37.4 bits (85), Expect = 0.051
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 15/60 (25%)
Query: 8 GGGGGGSGPSAGSG----------GGGFGGSAAVAAATASGG-----KSGGGSCGGGGSY 52
GGGGGGS S G G GG +GG ++ GG + GG GGGG Y
Sbjct: 250 GGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGY 309
Score = 37.0 bits (84), Expect = 0.066
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 4 QKHGGGGGG---GSGPSAGSGGGGFGGSAAVAAATASGGKSGG--GSCGGG-GSYS 53
Q+ GGG G G G + G GGG FG GG GG GS GGG G Y+
Sbjct: 213 QRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYN 268
Score = 36.6 bits (83), Expect = 0.086
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Query: 7 GGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA 66
GGG GGG G + GG FGG G GGG+ G+YS S+ G
Sbjct: 300 GGGYGGGGGYDGYNEGGNFGG----------GNYGGGGNYNDFGNYSGQQQSNYGPMKGG 349
Query: 67 A 67
+
Sbjct: 350 S 350
>gi|13775236 scratch [Homo sapiens]
Length = 348
Score = 48.1 bits (113), Expect = 3e-05
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 2 APQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAA 61
AP GGGGG G S GSG GG GG+ A A A ++G G+ G GG ++
Sbjct: 144 APDGDAGGGGGAGGRSLGSGPGGRGGTRAGAGTEA---RAGPGAAGAGGRHACGECGKTY 200
Query: 62 AAAGAAVLPVKKPKMEHVQADHEL 85
A + + + K H D +L
Sbjct: 201 ATSS----NLSRHKQTHRSLDSQL 220
Score = 31.2 bits (69), Expect = 3.6
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
Query: 4 QKHGGGGGGGSGPSAGS-----GGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSS 58
++ G + PS S G G GG A GG+S G GG G A + +
Sbjct: 125 RRKASNAGSAAAPSTASAAAPDGDAGGGGGA--------GGRSLGSGPGGRGGTRAGAGT 176
Query: 59 SAAAAAGAA 67
A A GAA
Sbjct: 177 EARAGPGAA 185
>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 47.8 bits (112), Expect = 4e-05
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 12/65 (18%)
Query: 6 HGGGGGGGSGPSAGSGGG----------GFGGSAAVAAATASGG--KSGGGSCGGGGSYS 53
+GGGGGGG G GGG GFGG + + +S G KSGGG GGG S+
Sbjct: 223 YGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWG 282
Query: 54 ASSSS 58
S+S
Sbjct: 283 GRSNS 287
Score = 44.3 bits (103), Expect = 4e-04
Identities = 23/61 (37%), Positives = 27/61 (44%)
Query: 5 KHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAA 64
K GGGG G G GGGG+ ++ GG G GG GSYS SS +
Sbjct: 211 KGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKS 270
Query: 65 G 65
G
Sbjct: 271 G 271
Score = 41.2 bits (95), Expect = 0.004
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 6 HGGGGGGGSGPS-AGSGGGGFGGSAAVAAATASGG----KSGGGSCGGGGSYSASSSSSA 60
+ GGGGGGS S G GG G GG + GG GG GGGG Y+A
Sbjct: 180 YSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGG 239
Query: 61 AAAAGAA 67
++ G +
Sbjct: 240 GSSYGGS 246
Score = 37.0 bits (84), Expect = 0.066
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 11/38 (28%)
Query: 3 PQKHGGGGGGG---------SGPSAG--SGGGGFGGSA 29
P K GGGGGGG SGP G GGGG+GGS+
Sbjct: 267 PMKSGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGGSS 304
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 47.8 bits (112), Expect = 4e-05
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 31/130 (23%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGG---GSCGGGGSYSASSSSSAAAAA 64
G GGGG+G AG G GG GGS A +SGG +GG S GGG S+ S S
Sbjct: 47 GLGGGGAGAGAGVGAGGGGGSGA-----SSGGGAGGLQPSSRAGGGRPSSPSPS------ 95
Query: 65 GAAVLPVKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLTYMSHRNSR 124
V +K ++E +Q + E +K Q+Y +F+ R + Y +
Sbjct: 96 --VVSEKEKEELERLQKEEE----ERKKRLQLY-----------VFVMRCIAYPFNAKQP 138
Query: 125 TNIKRKTFKV 134
T++ R+ K+
Sbjct: 139 TDMARRQQKI 148
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 47.8 bits (112), Expect = 4e-05
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 31/130 (23%)
Query: 8 GGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGG---GSCGGGGSYSASSSSSAAAAA 64
G GGGG+G AG G GG GGS A +SGG +GG S GGG S+ S S
Sbjct: 47 GLGGGGAGAGAGVGAGGGGGSGA-----SSGGGAGGLQPSSRAGGGRPSSPSPS------ 95
Query: 65 GAAVLPVKKPKMEHVQADHELFLQAFEKPTQIYRFLRTRNLIAPIFLHRTLTYMSHRNSR 124
V +K ++E +Q + E +K Q+Y +F+ R + Y +
Sbjct: 96 --VVSEKEKEELERLQKEEE----ERKKRLQLY-----------VFVMRCIAYPFNAKQP 138
Query: 125 TNIKRKTFKV 134
T++ R+ K+
Sbjct: 139 TDMARRQQKI 148
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,868,444
Number of Sequences: 37866
Number of extensions: 1493802
Number of successful extensions: 25296
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 10468
Number of HSP's gapped (non-prelim): 7223
length of query: 739
length of database: 18,247,518
effective HSP length: 110
effective length of query: 629
effective length of database: 14,082,258
effective search space: 8857740282
effective search space used: 8857740282
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.