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Search of human proteins with 197085595
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197085595 peroxisomal biogenesis factor 19 isoform b [Homo
sapiens]
(209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197085595 peroxisomal biogenesis factor 19 isoform b [Homo sa... 421 e-118
gi|4506339 peroxisomal biogenesis factor 19 isoform a [Homo sapi... 421 e-118
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 36 0.027
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 33 0.13
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 33 0.17
gi|38176300 nestin [Homo sapiens] 33 0.23
gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens] 32 0.39
gi|33946313 ninein isoform 4 [Homo sapiens] 32 0.39
gi|33946321 ninein isoform 5 [Homo sapiens] 32 0.39
gi|148536871 ninein isoform 1 [Homo sapiens] 32 0.39
gi|148536869 ninein isoform 2 [Homo sapiens] 32 0.39
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 32 0.51
gi|28460688 taxilin [Homo sapiens] 31 0.66
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens] 31 0.66
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 31 0.66
gi|110611218 ribosome binding protein 1 [Homo sapiens] 31 0.86
gi|110611220 ribosome binding protein 1 [Homo sapiens] 31 0.86
gi|6912482 leucine zipper-EF-hand containing transmembrane prote... 31 0.86
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 31 0.86
gi|38348282 RUN and FYVE domain containing 4 [Homo sapiens] 31 0.86
gi|239754791 PREDICTED: actin-related Arp11 [Homo sapiens] 30 1.1
gi|239743387 PREDICTED: actin-related Arp11 [Homo sapiens] 30 1.1
gi|239509084 PREDICTED: actin-related Arp11 [Homo sapiens] 30 1.1
gi|112420968 coiled-coil domain containing 158 [Homo sapiens] 30 1.1
gi|92373393 actin-related protein 3-beta isoform 2 [Homo sapiens] 30 1.1
gi|9966913 actin-related protein 3-beta isoform 1 [Homo sapiens] 30 1.1
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 30 1.5
gi|153945715 myosin VC [Homo sapiens] 30 1.9
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s... 30 1.9
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s... 30 1.9
>gi|197085595 peroxisomal biogenesis factor 19 isoform b [Homo
sapiens]
Length = 209
Score = 421 bits (1082), Expect = e-118
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSE 60
MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSE
Sbjct: 1 MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSE 60
Query: 61 EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL 120
EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL
Sbjct: 61 EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL 120
Query: 121 PPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAG 180
PPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAG
Sbjct: 121 PPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAG 180
Query: 181 EMPPGLNFDLDALNLSGPPGASGEQCLIM 209
EMPPGLNFDLDALNLSGPPGASGEQCLIM
Sbjct: 181 EMPPGLNFDLDALNLSGPPGASGEQCLIM 209
>gi|4506339 peroxisomal biogenesis factor 19 isoform a [Homo
sapiens]
Length = 299
Score = 421 bits (1082), Expect = e-118
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSE 60
MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSE
Sbjct: 91 MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSE 150
Query: 61 EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL 120
EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL
Sbjct: 151 EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL 210
Query: 121 PPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAG 180
PPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAG
Sbjct: 211 PPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAG 270
Query: 181 EMPPGLNFDLDALNLSGPPGASGEQCLIM 209
EMPPGLNFDLDALNLSGPPGASGEQCLIM
Sbjct: 271 EMPPGLNFDLDALNLSGPPGASGEQCLIM 299
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 35.8 bits (81), Expect = 0.027
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 2 KELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKE----TLSGLAKNATDLQNSS 57
+E+ +E L+ + KL E+ + T QQ+ T KE +S + QN +
Sbjct: 156 EEVTKERDQLLSEVVKLRESLAQT----TEQQQETERSKEEAEHAISQFQQEIQQRQNEA 211
Query: 58 MSE----EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKE---ITEKYP 110
E E+L K ++ + D + I + Q + ++ L LKE + E+
Sbjct: 212 SREFRKKEKLEKELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERAA 271
Query: 111 EWLQSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDL 164
+ L+ + + + ++ EQHS++C+ Q + + + ++ +M LD+
Sbjct: 272 KELEQFQ--MRNAKLQQENEQHSLVCEQLSQENQQKALELKAKEEEVHQMRLDI 323
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 33.5 bits (75), Expect = 0.13
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 2 KELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKET----------LSGLAKNAT 51
+EL + E Q+L EA R + + + +S L+E +S L++ T
Sbjct: 510 QELCRAQGQQEELLQRLQEAQEREAATASQTRALSSQLEEARAAQRELEAQVSSLSRQVT 569
Query: 52 DLQNSSMSEEELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPE 111
LQ E+ L ++ + + + P + L K+V +L+E E+
Sbjct: 570 QLQGQW--EQRLEESSQAKTIHTASETNGMGPPEGGPQEAQLRKEVA--ALREQLEQ--- 622
Query: 112 WLQSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFE 159
SHR S E + QE++ + + E+ EAE + E+ Q+ E
Sbjct: 623 -AHSHRPSGKEEALCQLQEENRRLSREQERLEAELAQEQESKQRLEGE 669
>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
Length = 1194
Score = 33.1 bits (74), Expect = 0.17
Identities = 35/176 (19%), Positives = 66/176 (37%), Gaps = 30/176 (17%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQN--SSMSE 60
+L E L Q +L E G ++ +E S L+ L D++ +++ +
Sbjct: 251 QLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEALAQREDMEERITTLEK 310
Query: 61 EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESL 120
L+ E + + + + + L SK+ LY +E + + EWL ++ L
Sbjct: 311 RYLSAQREATSLHDANDK---------LENELASKESLYRQSEEKSRQLAEWLDDAKQKL 361
Query: 121 P---------PE----------QFEKYQEQHSVMCKICEQFEAETPTDSETTQKAR 157
PE K +E+H + Q EA+ ++ Q+AR
Sbjct: 362 QQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRAR 417
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 32.7 bits (73), Expect = 0.23
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 33 QEFTSCLKETLSGLAKNAT-----DLQNSSMSEEELTKAMEG---LGMDEGDGEGNILPI 84
QEF LKE K+ L+++ E K+ E L E +G + P+
Sbjct: 804 QEFLKSLKEESVEAVKSLETEILESLKSAGQENLETLKSPETQAPLWTPEEINQGAMNPL 863
Query: 85 MQSIMQNLLSKDVLYPSLKEITEKYPEWLQS----HRESL-PPEQFEKYQEQHSVMCKIC 139
+ I + L S +V + + + E+ E L+S + E+L PE+ +K +++ +
Sbjct: 864 EKEIQEPLESVEVNQETFRLLEEENQESLRSLGAWNLENLRSPEEVDKESQRNLEEEENL 923
Query: 140 EQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGL----NFDLDALNL 195
+ E + S + D+ Q+ +D +ELA E PPG+ N D LNL
Sbjct: 924 GKGEYQESLRSLEEEGQELPQSADV-QRWEDTVEKDQELAQESPPGMAGVENEDEAELNL 982
Query: 196 SGPPGASGEQ 205
G +G++
Sbjct: 983 REQDGFTGKE 992
>gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]
Length = 4158
Score = 32.0 bits (71), Expect = 0.39
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 85 MQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFEA 144
++ + L K +L+ S E + EWL+S + L PE Q S K Q E
Sbjct: 879 LEEVSAELKLKQLLWDSFSEWDKLQQEWLKSKFDCLDPEVL---NGQVSKYAKFVTQLEK 935
Query: 145 ETPTDSETTQ-KARFEMVLDLMQQLQDLGHP 174
P +S Q K + E + + + + DL +P
Sbjct: 936 GLPPNSVVPQLKYKVEKMKEKLPVIIDLRNP 966
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 32.0 bits (71), Expect = 0.39
Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 6 EEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEELT- 64
E+ +L + Q ++ R+ SD+ Q+ LK+ + L K + S + E T
Sbjct: 1772 EKVQNLEDTVQNVNLQMSRMKSDLRVTQQEKEALKQEVMSLHKQLQNAGGKSWAPEIATH 1831
Query: 65 -----KAMEGLGMDEGD----GEGNIL----PIMQSIMQNLLSKDVLYPSLKEITEKYPE 111
+ L D+ D E +L +Q+++QN +K L S +++ +
Sbjct: 1832 PSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQN--TKAELTHSREKVRQLESN 1889
Query: 112 WLQSHRESLPPEQFEKYQEQHSVMCK-ICEQFEAE-TPTDSETTQKARFEMVLD------ 163
L H++ L P EQ + K C+QF+ E +P + + +Q E L+
Sbjct: 1890 LLPKHQKHLNPSGTMNPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLEN 1949
Query: 164 ---------LMQQLQDLGHPPKELAGEMPPGLNFDLDALNLSGPPGASGEQCL 207
L +QL ++ H + A P +DL L P EQ L
Sbjct: 1950 EGLKKKQVKLDEQLMEMQH-LRSTATPSPSPHAWDLQLLQQQACPMVPREQFL 2001
Score = 31.6 bits (70), Expect = 0.51
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEE 62
+L EE+ HL E+ + + + E + L + + + LQ+S+ +EE+
Sbjct: 713 KLEEEKTHLQEKLR------------LQHEMELKARLTQAQASFEREREGLQSSAWTEEK 760
Query: 63 ---LTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRES 119
LT+ +E ++ + + ++ L K+ L KE+ EK+ LQ RE
Sbjct: 761 VRGLTQELEQFHQEQ---------LTSLVEKHTLEKEELR---KELLEKHQRELQEGREK 808
Query: 120 LPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKE 177
+ E + + I QF+++ +E + A + Q+L+DL +E
Sbjct: 809 METECNRRTSQ-------IEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQRE 859
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 32.0 bits (71), Expect = 0.39
Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 6 EEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEELT- 64
E+ +L + Q ++ R+ SD+ Q+ LK+ + L K + S + E T
Sbjct: 1766 EKVQNLEDTVQNVNLQMSRMKSDLRVTQQEKEALKQEVMSLHKQLQNAGGKSWAPEIATH 1825
Query: 65 -----KAMEGLGMDEGD----GEGNIL----PIMQSIMQNLLSKDVLYPSLKEITEKYPE 111
+ L D+ D E +L +Q+++QN +K L S +++ +
Sbjct: 1826 PSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQN--TKAELTHSREKVRQLESN 1883
Query: 112 WLQSHRESLPPEQFEKYQEQHSVMCK-ICEQFEAE-TPTDSETTQKARFEMVLD------ 163
L H++ L P EQ + K C+QF+ E +P + + +Q E L+
Sbjct: 1884 LLPKHQKHLNPSGTMNPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLEN 1943
Query: 164 ---------LMQQLQDLGHPPKELAGEMPPGLNFDLDALNLSGPPGASGEQCL 207
L +QL ++ H + A P +DL L P EQ L
Sbjct: 1944 EGLKKKQVKLDEQLMEMQH-LRSTATPSPSPHAWDLQLLQQQACPMVPREQFL 1995
Score = 31.6 bits (70), Expect = 0.51
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEE 62
+L EE+ HL E+ + + + E + L + + + LQ+S+ +EE+
Sbjct: 707 KLEEEKTHLQEKLR------------LQHEMELKARLTQAQASFEREREGLQSSAWTEEK 754
Query: 63 ---LTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRES 119
LT+ +E ++ + + ++ L K+ L KE+ EK+ LQ RE
Sbjct: 755 VRGLTQELEQFHQEQ---------LTSLVEKHTLEKEELR---KELLEKHQRELQEGREK 802
Query: 120 LPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKE 177
+ E + + I QF+++ +E + A + Q+L+DL +E
Sbjct: 803 METECNRRTSQ-------IEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQRE 853
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 32.0 bits (71), Expect = 0.39
Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 6 EEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEELT- 64
E+ +L + Q ++ R+ SD+ Q+ LK+ + L K + S + E T
Sbjct: 1766 EKVQNLEDTVQNVNLQMSRMKSDLRVTQQEKEALKQEVMSLHKQLQNAGGKSWAPEIATH 1825
Query: 65 -----KAMEGLGMDEGD----GEGNIL----PIMQSIMQNLLSKDVLYPSLKEITEKYPE 111
+ L D+ D E +L +Q+++QN +K L S +++ +
Sbjct: 1826 PSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQN--TKAELTHSREKVRQLESN 1883
Query: 112 WLQSHRESLPPEQFEKYQEQHSVMCK-ICEQFEAE-TPTDSETTQKARFEMVLD------ 163
L H++ L P EQ + K C+QF+ E +P + + +Q E L+
Sbjct: 1884 LLPKHQKHLNPSGTMNPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLEN 1943
Query: 164 ---------LMQQLQDLGHPPKELAGEMPPGLNFDLDALNLSGPPGASGEQCL 207
L +QL ++ H + A P +DL L P EQ L
Sbjct: 1944 EGLKKKQVKLDEQLMEMQH-LRSTATPSPSPHAWDLQLLQQQACPMVPREQFL 1995
Score = 31.6 bits (70), Expect = 0.51
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEE 62
+L EE+ HL E+ + + + E + L + + + LQ+S+ +EE+
Sbjct: 707 KLEEEKTHLQEKLR------------LQHEMELKARLTQAQASFEREREGLQSSAWTEEK 754
Query: 63 ---LTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRES 119
LT+ +E ++ + + ++ L K+ L KE+ EK+ LQ RE
Sbjct: 755 VRGLTQELEQFHQEQ---------LTSLVEKHTLEKEELR---KELLEKHQRELQEGREK 802
Query: 120 LPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKE 177
+ E + + I QF+++ +E + A + Q+L+DL +E
Sbjct: 803 METECNRRTSQ-------IEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQRE 853
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 32.0 bits (71), Expect = 0.39
Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 6 EEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEELT- 64
E+ +L + Q ++ R+ SD+ Q+ LK+ + L K + S + E T
Sbjct: 1766 EKVQNLEDTVQNVNLQMSRMKSDLRVTQQEKEALKQEVMSLHKQLQNAGGKSWAPEIATH 1825
Query: 65 -----KAMEGLGMDEGD----GEGNIL----PIMQSIMQNLLSKDVLYPSLKEITEKYPE 111
+ L D+ D E +L +Q+++QN +K L S +++ +
Sbjct: 1826 PSGLHNQQKRLSWDKLDHLMNEEQQLLWQENERLQTMVQN--TKAELTHSREKVRQLESN 1883
Query: 112 WLQSHRESLPPEQFEKYQEQHSVMCK-ICEQFEAE-TPTDSETTQKARFEMVLD------ 163
L H++ L P EQ + K C+QF+ E +P + + +Q E L+
Sbjct: 1884 LLPKHQKHLNPSGTMNPTEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLEN 1943
Query: 164 ---------LMQQLQDLGHPPKELAGEMPPGLNFDLDALNLSGPPGASGEQCL 207
L +QL ++ H + A P +DL L P EQ L
Sbjct: 1944 EGLKKKQVKLDEQLMEMQH-LRSTATPSPSPHAWDLQLLQQQACPMVPREQFL 1995
Score = 31.6 bits (70), Expect = 0.51
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEE 62
+L EE+ HL E+ + + + E + L + + + LQ+S+ +EE+
Sbjct: 707 KLEEEKTHLQEKLR------------LQHEMELKARLTQAQASFEREREGLQSSAWTEEK 754
Query: 63 ---LTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRES 119
LT+ +E ++ + + ++ L K+ L KE+ EK+ LQ RE
Sbjct: 755 VRGLTQELEQFHQEQ---------LTSLVEKHTLEKEELR---KELLEKHQRELQEGREK 802
Query: 120 LPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKE 177
+ E + + I QF+++ +E + A + Q+L+DL +E
Sbjct: 803 METECNRRTSQ-------IEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQRE 853
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 31.6 bits (70), Expect = 0.51
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 27/204 (13%)
Query: 2 KELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQ---EFTSCLKETLSGLAKNATDLQNSSM 58
KE E L + Q+L E GR+ +TS + E L+ GL L+ S
Sbjct: 624 KEKGERAEKLERELQRLQEENGRLARKVTSLETATEKVEALEHESQGLQLENRTLRKSLD 683
Query: 59 SEEELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRE 118
+ + ++ +EGL D + L + + L + + + S K + + E Q RE
Sbjct: 684 TLQNVSLQLEGLERDNKQLDAENLELRR------LVETMRFTSTK-LAQMERENQQLERE 736
Query: 119 SLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKEL 178
E+ K + + K E+ E + S L L Q L+ H + L
Sbjct: 737 K---EELRKNVDLLKALGKKSERLELSYQSVSAEN--------LRLQQSLESSSHKTQTL 785
Query: 179 AGEM------PPGLNFDLDALNLS 196
E+ L DL+AL L+
Sbjct: 786 ESELGELEAERQALRRDLEALRLA 809
>gi|28460688 taxilin [Homo sapiens]
Length = 546
Score = 31.2 bits (69), Expect = 0.66
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEE 62
ELAE L+EQ++ E +V QQ+ + + K A + ++ +
Sbjct: 304 ELAERLKKLIEQYELREEHIDKVFKHKDLQQQLVDAKLQQAQEMLKEAEE-RHQREKDFL 362
Query: 63 LTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPP 122
L +A+E M E +M+ +L + LY TEK+ E+ + +S
Sbjct: 363 LKEAVESQRMCE---------LMKQQETHLKQQLALY------TEKFEEFQNTLSKS--S 405
Query: 123 EQFEKYQEQHSVMCKICEQFEAETP---TDSETTQKARFEM 160
E F ++++ M K ++ E ET + E++ KA EM
Sbjct: 406 EVFTTFKQEMEKMTKKIKKLEKETTMYRSRWESSNKALLEM 446
>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
Length = 1035
Score = 31.2 bits (69), Expect = 0.66
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDM--TSQQEFTSCLKETLSGLAKNATDLQNSSMSE 60
E AE+EP E + + + VGS E LK K LQ+SS+ E
Sbjct: 387 ETAEKEPPAAEDDIRGIQLSPGVGSSAGPPGDLEDDEGLKHLQQEAEKLVASLQDSSLEE 446
Query: 61 EELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKD----VLYPSLKEITEKYPEWLQS 115
E+ T AM+ G+ LP+ + KD + P T++ EW Q+
Sbjct: 447 EQFTAAMQTQGL-RHSAAATALPLSHGAARKWFYKDPQGEIQGPF---TTQEMAEWFQA 501
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 31.2 bits (69), Expect = 0.66
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 17 KLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEELTKAMEGLGMDEGD 76
K+SE A S+ + Q FT+C++ K N +++ ++ E +G GD
Sbjct: 1728 KISERAKIDASERGNVQFFTTCIEAGALDYLKQLHTESNETLTAKKQEGEKEIIG---GD 1784
Query: 77 GEGN--ILPIMQSIMQNLLSK-DVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHS 133
EG +L QS+++ +S+ D++ + + + QS +P E+ K + S
Sbjct: 1785 VEGTKLLLKKRQSLVERTVSETDIIPGDVHNTVKVFMTEPQSTFGKIPKEEIIK-GDLTS 1843
Query: 134 VMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGLNFDLD 191
+ + + +T T +E K +L ++ L++ H KE + P + D++
Sbjct: 1844 TLNSLSQAVNQKTVTKTEEIIKGN---MLATLKSLKESSHRWKE--SKQPDAIPGDIE 1896
>gi|110611218 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 30.8 bits (68), Expect = 0.86
Identities = 34/178 (19%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 1 MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCL-------KETLSGLAKNATDL 53
+++L E+ P L++ +E + + S + +E S L + L+ DL
Sbjct: 653 LQDLKEKGPTLLKHPPAPAEPSSDLASKLREAEETQSTLQAECDQYRSILAETEGMLRDL 712
Query: 54 QNSSMSEEELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWL 113
Q S EE++ +A G +E + ++ I++ L + ++E T L
Sbjct: 713 QKSVEEEEQVWRAKVGAAEEELQKSRVTVKHLEEIVEKLKGELESSDQVREHTSHLEAEL 772
Query: 114 QSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDL 171
+ H + E + Y ++ + + ++ + +++ QK E+ L + QQL ++
Sbjct: 773 EKHMAAASAE-CQNYAKEVAGLRQLLLESQSQLDAAKSEAQKQSDELAL-VRQQLSEM 828
>gi|110611220 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 30.8 bits (68), Expect = 0.86
Identities = 34/178 (19%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 1 MKELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCL-------KETLSGLAKNATDL 53
+++L E+ P L++ +E + + S + +E S L + L+ DL
Sbjct: 653 LQDLKEKGPTLLKHPPAPAEPSSDLASKLREAEETQSTLQAECDQYRSILAETEGMLRDL 712
Query: 54 QNSSMSEEELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWL 113
Q S EE++ +A G +E + ++ I++ L + ++E T L
Sbjct: 713 QKSVEEEEQVWRAKVGAAEEELQKSRVTVKHLEEIVEKLKGELESSDQVREHTSHLEAEL 772
Query: 114 QSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDL 171
+ H + E + Y ++ + + ++ + +++ QK E+ L + QQL ++
Sbjct: 773 EKHMAAASAE-CQNYAKEVAGLRQLLLESQSQLDAAKSEAQKQSDELAL-VRQQLSEM 828
>gi|6912482 leucine zipper-EF-hand containing transmembrane protein
1 [Homo sapiens]
Length = 739
Score = 30.8 bits (68), Expect = 0.86
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 2 KELAEEEPHLVEQFQKLSEAAG------------RVGSDMTSQQEFTSCLKETLSGLAKN 49
+E A ++ H ++ QK SE A R G++ + T ETL A
Sbjct: 472 EEAAIQQEHREKELQKRSEVAKDFEPERVVAAPQRPGTEPQPEMPDTVLQSETLKDTAPV 531
Query: 50 ATDLQNSSMSEEELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKY 109
L+ EEE+TK +E D + +Q ++L + LKE + Y
Sbjct: 532 LEGLK-----EEEITK-------EEIDILSDACSKLQEQKKSLTKEKEELELLKEDVQDY 579
Query: 110 PEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFE 143
E LQ ++ L EKY E+ ++ ++ +
Sbjct: 580 SEDLQEIKKELSKTGEEKYVEESKASKRLTKRVQ 613
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.8 bits (68), Expect = 0.86
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 5/148 (3%)
Query: 2 KELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEE 61
KEL ++ H E ++ + + + +K L K + S S+E
Sbjct: 1560 KELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVKSKE 1619
Query: 62 ELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLS-KDVLYPSLKEITEKYPEWLQSHRESL 120
E KA+E E + + + + Q + + K L ++E E+Y + +SH L
Sbjct: 1620 EELKALED--RLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYKKGTESHLSEL 1677
Query: 121 PPEQFEKYQEQHSV--MCKICEQFEAET 146
+ E+ +E H + K E ++ET
Sbjct: 1678 NTKLQEREREVHILEEKLKSVESSQSET 1705
>gi|38348282 RUN and FYVE domain containing 4 [Homo sapiens]
Length = 398
Score = 30.8 bits (68), Expect = 0.86
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 4 LAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEEL 63
L +E L +K E A R + Q+ L+E LS + +LQ +++
Sbjct: 238 LQDEIKSLRLGLRKAEEQAQRQEQLLREQEGELQALREQLSRCQEERAELQAQLEQKQQE 297
Query: 64 TKAMEGLGMDEGDGEGNILPIM-QSIMQNLLSKDVLYPSLKEITEKYPE 111
+ + + +E G+ +++ M + +++ + KD L+ L+ ++ PE
Sbjct: 298 AERRDAMYQEELGGQRDLVQAMKRRVLELIQEKDRLWQRLQHLSSMAPE 346
>gi|239754791 PREDICTED: actin-related Arp11 [Homo sapiens]
Length = 210
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 65 KAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQ 124
+ + G+ +D GDG +++P+ + + K + ++IT + L+ +PPEQ
Sbjct: 32 RTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG-RDITYFIQQLLREREVGIPPEQ 90
Query: 125 -FEKYQEQHSVMCKICEQFEAE 145
E + C IC E
Sbjct: 91 SLETAKAIKEKYCYICPDIVKE 112
>gi|239743387 PREDICTED: actin-related Arp11 [Homo sapiens]
Length = 210
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 65 KAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQ 124
+ + G+ +D GDG +++P+ + + K + ++IT + L+ +PPEQ
Sbjct: 32 RTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG-RDITYFIQQLLREREVGIPPEQ 90
Query: 125 -FEKYQEQHSVMCKICEQFEAE 145
E + C IC E
Sbjct: 91 SLETAKAIKEKYCYICPDIVKE 112
>gi|239509084 PREDICTED: actin-related Arp11 [Homo sapiens]
Length = 210
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 65 KAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQ 124
+ + G+ +D GDG +++P+ + + K + ++IT + L+ +PPEQ
Sbjct: 32 RTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG-RDITYFIQQLLREREVGIPPEQ 90
Query: 125 -FEKYQEQHSVMCKICEQFEAE 145
E + C IC E
Sbjct: 91 SLETAKAIKEKYCYICPDIVKE 112
>gi|112420968 coiled-coil domain containing 158 [Homo sapiens]
Length = 1113
Score = 30.4 bits (67), Expect = 1.1
Identities = 30/167 (17%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 3 ELAEEEPHLVEQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNS-SMSEE 61
E E+ L Q + E +V ++T+++ + T+S L + + + + +
Sbjct: 458 ESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTISDLTTSLQEKERAIEATNA 517
Query: 62 ELTKAMEGLGM---------DEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEW 112
E+TK + + +EGD N+ +++ + KD + L++ E +
Sbjct: 518 EITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMTEKDKVIEILRQQIENMTQL 577
Query: 113 LQSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFE 159
+ H + Q EK Q + + + E E + D + + E
Sbjct: 578 VGQHGRTAGAMQVEKAQLEKEINDRRMELKELKILKDKKDAKIRELE 624
>gi|92373393 actin-related protein 3-beta isoform 2 [Homo sapiens]
Length = 348
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 65 KAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQ 124
+ + G+ +D GDG +++P+ + + K + ++IT + L+ +PPEQ
Sbjct: 161 RTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG-RDITYFIQQLLREREVGIPPEQ 219
Query: 125 -FEKYQEQHSVMCKICEQFEAE 145
E + C IC E
Sbjct: 220 SLETAKAIKEKYCYICPDIVKE 241
>gi|9966913 actin-related protein 3-beta isoform 1 [Homo sapiens]
Length = 418
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 65 KAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQ 124
+ + G+ +D GDG +++P+ + + K + ++IT + L+ +PPEQ
Sbjct: 161 RTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG-RDITYFIQQLLREREVGIPPEQ 219
Query: 125 -FEKYQEQHSVMCKICEQFEAE 145
E + C IC E
Sbjct: 220 SLETAKAIKEKYCYICPDIVKE 241
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 30.0 bits (66), Expect = 1.5
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 78 EGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSV--- 134
E NILP+ S+ + ++ V YP + + + + + ++L PEQ ++ Q SV
Sbjct: 85 EKNILPVESSLKEAIIVGQVNYPKVADSS----SFDEDSSDALSPEQPASHESQGSVPSP 140
Query: 135 -MCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGL 186
++ E + T + S T ++ M D + L PP +PP L
Sbjct: 141 LEARVSEPLLSAT-SASPTQVVSQLPMGRDSREMLFLAEQPPLPPPPLLPPSL 192
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 29.6 bits (65), Expect = 1.9
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 12 VEQFQKLSEAAGRVGSDMTSQQE----FTSCLKETLSGLAKNATDLQNSSMS-------- 59
VE+ QKL + + + +E + ++E L+ L K+ ++L+
Sbjct: 923 VEKIQKLEAELEKAATHRRNYEEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQEK 982
Query: 60 EEELTKAMEGLGMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRES 119
EEL + M+ L + + + + +L S + T+ Y + +QS +E
Sbjct: 983 TEELKEKMDNLTKQ----------LFDDVQKEERQRMLLEKSFELKTQDYEKQIQSLKEE 1032
Query: 120 LPPEQFEKYQEQHSVMCK--ICEQFEAETPTDSETTQK-ARFEMVLDLMQ 166
+ + EK Q QH V + + +AE S+ + + FE ++L+Q
Sbjct: 1033 IKALKDEKMQLQHLVEGEHVTSDGLKAEVARLSKQVKTISEFEKEIELLQ 1082
>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
sapiens]
Length = 1719
Score = 29.6 bits (65), Expect = 1.9
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 19/116 (16%)
Query: 38 CLKETLSGLAKNATDLQNSSMSEEELTKAMEGLGMDE--------GDGEGNILPIMQSIM 89
C E + K TDL+ S+ EE EG+ +E D EG L + + IM
Sbjct: 678 CSIEHQQEITKLKTDLEKKSIFYEEELSKREGIHANEIKNLKKELHDSEGQQLALNKEIM 737
Query: 90 QNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFEAE 145
LK+ EK QS RE E ++Y+ + ++ + ++ +E
Sbjct: 738 -----------ILKDKLEKTRRESQSEREEFESEFKQQYEREKVLLTEENKKLTSE 782
>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
sapiens]
Length = 1638
Score = 29.6 bits (65), Expect = 1.9
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 19/116 (16%)
Query: 38 CLKETLSGLAKNATDLQNSSMSEEELTKAMEGLGMDE--------GDGEGNILPIMQSIM 89
C E + K TDL+ S+ EE EG+ +E D EG L + + IM
Sbjct: 597 CSIEHQQEITKLKTDLEKKSIFYEEELSKREGIHANEIKNLKKELHDSEGQQLALNKEIM 656
Query: 90 QNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFEAE 145
LK+ EK QS RE E ++Y+ + ++ + ++ +E
Sbjct: 657 -----------ILKDKLEKTRRESQSEREEFESEFKQQYEREKVLLTEENKKLTSE 701
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,049,223
Number of Sequences: 37866
Number of extensions: 409431
Number of successful extensions: 1462
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1429
Number of HSP's gapped (non-prelim): 108
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.