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Search of human proteins with 196115158
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
(818 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ... 1659 0.0
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ... 1645 0.0
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ... 1630 0.0
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ... 1615 0.0
gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1 [... 1615 0.0
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 83 1e-15
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 81 4e-15
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 79 2e-14
gi|56549696 E1A binding protein p400 [Homo sapiens] 79 2e-14
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 75 2e-13
gi|38788274 bromodomain PHD finger transcription factor isoform ... 72 2e-12
gi|146134388 YLP motif containing 1 [Homo sapiens] 69 2e-11
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 67 7e-11
gi|119943102 CREB binding protein isoform b [Homo sapiens] 67 9e-11
gi|119943104 CREB binding protein isoform a [Homo sapiens] 67 9e-11
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 66 1e-10
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 66 1e-10
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 66 1e-10
gi|38788260 bromodomain PHD finger transcription factor isoform ... 66 1e-10
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 65 2e-10
gi|221139761 zinc finger protein 853 [Homo sapiens] 64 6e-10
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 64 6e-10
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 64 6e-10
gi|110349719 titin isoform N2-A [Homo sapiens] 64 7e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 63 1e-09
gi|197276594 RNA binding motif protein 20 [Homo sapiens] 63 1e-09
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 63 1e-09
gi|58530845 zyxin [Homo sapiens] 62 2e-09
gi|4508047 zyxin [Homo sapiens] 62 2e-09
gi|163965366 nascent polypeptide-associated complex alpha subuni... 62 2e-09
>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
Length = 818
Score = 1659 bits (4295), Expect = 0.0
Identities = 818/818 (100%), Positives = 818/818 (100%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLAT 120
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLAT
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLAT 120
Query: 121 PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMP 180
PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMP
Sbjct: 121 PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMP 180
Query: 181 VEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRS 240
VEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRS
Sbjct: 181 VEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRS 240
Query: 241 SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQS 300
SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQS
Sbjct: 241 SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQS 300
Query: 301 QTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQ 360
QTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQ
Sbjct: 301 QTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQ 360
Query: 361 PSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGG 420
PSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGG
Sbjct: 361 PSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGG 420
Query: 421 MEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRA 480
MEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRA
Sbjct: 421 MEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRA 480
Query: 481 FSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQR 540
FSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQR
Sbjct: 481 FSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQR 540
Query: 541 LGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAK 600
LGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAK
Sbjct: 541 LGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAK 600
Query: 601 QSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVDAVGCF 660
QSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVDAVGCF
Sbjct: 601 QSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVDAVGCF 660
Query: 661 EGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSETYSPNTAYGVDFLVPVMGYI 720
EGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSETYSPNTAYGVDFLVPVMGYI
Sbjct: 661 EGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSETYSPNTAYGVDFLVPVMGYI 720
Query: 721 CRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAINARNALTALF 780
CRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAINARNALTALF
Sbjct: 721 CRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAINARNALTALF 780
Query: 781 TSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 818
TSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT
Sbjct: 781 TSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 818
>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
[Homo sapiens]
Length = 842
Score = 1645 bits (4260), Expect = 0.0
Identities = 818/842 (97%), Positives = 818/842 (97%), Gaps = 24/842 (2%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG------------------------ 96
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 97 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 156
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 240
Query: 217 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 276
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 241 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 300
Query: 277 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 336
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 301 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 360
Query: 337 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 396
VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP
Sbjct: 361 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 420
Query: 397 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 456
EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR
Sbjct: 421 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 480
Query: 457 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 516
EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY
Sbjct: 481 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 540
Query: 517 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 576
ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC
Sbjct: 541 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 600
Query: 577 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 636
NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL
Sbjct: 601 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 660
Query: 637 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 696
KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW
Sbjct: 661 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 720
Query: 697 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 756
KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN
Sbjct: 721 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 780
Query: 757 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 816
PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL
Sbjct: 781 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 840
Query: 817 KT 818
KT
Sbjct: 841 KT 842
>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
Length = 837
Score = 1630 bits (4221), Expect = 0.0
Identities = 813/842 (96%), Positives = 813/842 (96%), Gaps = 29/842 (3%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG------------------------ 96
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 97 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 156
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
PQKQARTSSSTTPNRK TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRK-----TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 235
Query: 217 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 276
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 236 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 295
Query: 277 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 336
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 296 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 355
Query: 337 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 396
VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP
Sbjct: 356 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 415
Query: 397 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 456
EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR
Sbjct: 416 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 475
Query: 457 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 516
EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY
Sbjct: 476 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 535
Query: 517 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 576
ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC
Sbjct: 536 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 595
Query: 577 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 636
NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL
Sbjct: 596 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 655
Query: 637 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 696
KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW
Sbjct: 656 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 715
Query: 697 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 756
KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN
Sbjct: 716 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 775
Query: 757 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 816
PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL
Sbjct: 776 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 835
Query: 817 KT 818
KT
Sbjct: 836 KT 837
>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 1615 bits (4182), Expect = 0.0
Identities = 818/898 (91%), Positives = 818/898 (91%), Gaps = 80/898 (8%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG------------------------ 96
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 97 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 156
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 240
Query: 217 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 276
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 241 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 300
Query: 277 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 336
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 301 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 360
Query: 337 VQPQLQQEAEPQ------------------------------------------------ 348
VQPQLQQEAEPQ
Sbjct: 361 VQPQLQQEAEPQKQVQPQVQPQAHSQGPRQVQLQQEAEPLKQVQPQVQPQAHSQPPRQVQ 420
Query: 349 ----KQVQ----PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 400
KQVQ PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP
Sbjct: 421 LQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 480
Query: 401 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 460
VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG
Sbjct: 481 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 540
Query: 461 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 520
VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA
Sbjct: 541 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 600
Query: 521 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 580
SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ
Sbjct: 601 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 660
Query: 581 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 640
LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE
Sbjct: 661 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 720
Query: 641 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 700
KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE
Sbjct: 721 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 780
Query: 701 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 760
TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT
Sbjct: 781 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 840
Query: 761 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 818
TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT
Sbjct: 841 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 898
>gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 1615 bits (4182), Expect = 0.0
Identities = 818/898 (91%), Positives = 818/898 (91%), Gaps = 80/898 (8%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG------------------------ 96
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 97 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 156
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 240
Query: 217 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 276
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 241 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 300
Query: 277 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 336
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 301 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 360
Query: 337 VQPQLQQEAEPQ------------------------------------------------ 348
VQPQLQQEAEPQ
Sbjct: 361 VQPQLQQEAEPQKQVQPQVQPQAHSQGPRQVQLQQEAEPLKQVQPQVQPQAHSQPPRQVQ 420
Query: 349 ----KQVQ----PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 400
KQVQ PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP
Sbjct: 421 LQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 480
Query: 401 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 460
VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG
Sbjct: 481 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 540
Query: 461 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 520
VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA
Sbjct: 541 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 600
Query: 521 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 580
SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ
Sbjct: 601 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 660
Query: 581 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 640
LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE
Sbjct: 661 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 720
Query: 641 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 700
KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE
Sbjct: 721 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 780
Query: 701 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 760
TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT
Sbjct: 781 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 840
Query: 761 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 818
TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT
Sbjct: 841 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 898
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 82.8 bits (203), Expect = 1e-15
Identities = 92/320 (28%), Positives = 132/320 (41%), Gaps = 67/320 (20%)
Query: 5 QQQQQLQQQQQQLQQL-------QQQQLQQQQLQQQQLLQLQQLLQQSP---PQAPLPMA 54
Q QQQ+QQQQQQLQ++ QQQQ QQQQ QQQQ LQ Q +QQ P PQ P A
Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQA 285
Query: 55 VSRGL----------PPQQPQQPLLNLQG-------------TNSASLLNGSML------ 85
+ + L PP QPQQP + + A L G ML
Sbjct: 286 LPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPL 345
Query: 86 ---QRALLLQQ--LQGNLRGYGMASPGLAAPSLTPP--QLATPNLQQFFPQATRQSLLGP 138
+ +++QQ +Q ++ A A + P Q+ T L Q + P
Sbjct: 346 KFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARF---P 402
Query: 139 PPVGVPMNPSQFNLSGRNPQKQARTS-----SSTTPNRKDSSSQTMPVEDKSDPPEGSEE 193
P V PS GR P Q S SS +P ++ + Q+MP PP+ S +
Sbjct: 403 PTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMP-----PPPQPSPQ 457
Query: 194 AAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQL 253
+P + P P + P+P P+P + S + A+ ++ P+ PG L
Sbjct: 458 PGQPSSQPNSNVSSGPAP---SPSSFLPSPSPQPSQ-SPVTARTPQNFSVPS----PGPL 509
Query: 254 QVKAQPQARMTVPKQTQTPD 273
P + M+ +Q +
Sbjct: 510 NTPVNPSSVMSPAGSSQAEE 529
Score = 69.7 bits (169), Expect = 1e-11
Identities = 104/408 (25%), Positives = 139/408 (34%), Gaps = 87/408 (21%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQQQQQ QQQQQ Q QQQQ QQQQ Q QQ QQ Q L QQ
Sbjct: 163 QQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQ-------QQQ 215
Query: 64 PQQPLLNLQGTNSASL-LNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPN 122
QQ L+ L N + LQR LQ Q + A PP + P
Sbjct: 216 QQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPP-IQQPP 274
Query: 123 LQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN---PQKQARTSSSTTPNRKDSSSQTM 179
+QQ P PP +P Q + + + PQ Q + P++ SQT
Sbjct: 275 MQQPQP---------PPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQ 325
Query: 180 PVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLR 239
P+ ++ G +P P K +R
Sbjct: 326 PLVSQAQALPGQMLYTQP------------------------------------PLKFVR 349
Query: 240 SSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQ 299
+ ++PP Q QV+ Q A T A AQ++ + + AQ
Sbjct: 350 A--PMVVQQPPVQPQVQQQQTAVQT-------------AQAAQMVAPGVQMITEALAQGG 394
Query: 300 SQTQPRIPSTDT-----QVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQ 354
+ R P T L +Q Q S L + P Q+ + + + P
Sbjct: 395 MHIRARFPPTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLS---SPSPGQQVQTPQSMPPP 451
Query: 355 VHTQAQPSVQPQEHPPAQVSVQP-PEQTHEQPHTQPQVSLLAPEQTPV 401
QP QP P + VS P P + P PQ P Q+PV
Sbjct: 452 PQPSPQPG-QPSSQPNSNVSSGPAPSPSSFLPSPSPQ-----PSQSPV 493
Score = 63.9 bits (154), Expect = 6e-10
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 222 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 281
AP ++ P +L+ + +++ Q Q + Q QA + +Q Q +A ++
Sbjct: 137 APHSMAVVSTATPQTQLQLQQVALQQQQQQQ-QFQQQQQAALQQQQQQQQQQQF-QAQQS 194
Query: 282 QVLPRFQPRVLQVQA-QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQ 340
+ +FQ V Q Q Q Q Q Q + Q Q ++Q+Q Q L LQQ+Q Q Q
Sbjct: 195 AMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQ 254
Query: 341 LQQEAEPQK-QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQT 399
QQ+ + Q Q QP + QP +Q + PP+Q Q +Q H H QP P+Q
Sbjct: 255 QQQQQQQQALQAQPPIQ---QPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQ---PQQP 308
Query: 400 PVVVHVCGLEMPPDA 414
PV + ++PP +
Sbjct: 309 PVAQNQPS-QLPPQS 322
Score = 53.1 bits (126), Expect = 1e-06
Identities = 67/272 (24%), Positives = 100/272 (36%), Gaps = 30/272 (11%)
Query: 128 PQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDP 187
P QSL G P G + + R P + S + P+ P
Sbjct: 81 PMNALQSLTGGPAAGA----AGIGMPPRGPGQSLGGMGSL-------GAMGQPMSLSGQP 129
Query: 188 PEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEK 247
P G+ A M P+ + ++ + + + + + ++ ++
Sbjct: 130 PPGTSGMAPHSMAVVSTAT----PQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQ 185
Query: 248 EPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIP 307
+ Q Q A Q V +Q Q L + + Q L + Q Q Q+Q Q Q
Sbjct: 186 QQQFQAQQSAMQQQFQAVVQQQQ--QLQQQQQQQQHLIKLHH---QNQQQIQQQQQQLQR 240
Query: 308 STDTQVQPKLQKQAQTQTSPEHLVLQQKQVQ-PQLQQEAEPQKQVQPQV-----HTQ-AQ 360
Q+Q + Q+Q Q Q + + Q +Q P +QQ P Q PQ HTQ Q
Sbjct: 241 IAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQ 300
Query: 361 PSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVS 392
P QPQ+ P AQ P Q Q TQP VS
Sbjct: 301 PPPQPQQPPVAQ---NQPSQLPPQSQTQPLVS 329
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/365 (21%), Positives = 128/365 (35%), Gaps = 62/365 (16%)
Query: 91 LQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQF 150
LQ L G G + G+ P P Q + + SL G PP G
Sbjct: 85 LQSLTG---GPAAGAAGIGMPPRGPGQ-SLGGMGSLGAMGQPMSLSGQPPPGT------- 133
Query: 151 NLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPC 210
SG P A S++T + + + + + ++AA + + Q
Sbjct: 134 --SGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQA 191
Query: 211 PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQ 270
+ +++ ++ ++ +++ Q +K Q + + +Q Q
Sbjct: 192 QQSAMQQQFQAV---------------VQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQ 236
Query: 271 TPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHL 330
+ + L+ Q + Q Q Q Q Q Q + + QP +Q Q Q P
Sbjct: 237 QLQRIAQ-LQLQ-------QQQQQQQQQQQQQQQALQAQPPIQQPPMQ---QPQPPPSQA 285
Query: 331 VLQQKQVQPQLQQEAEPQKQVQPQV----------HTQAQPSV-QPQEHPPAQVSVQPP- 378
+ QQ Q Q P + QP V +Q QP V Q Q P + QPP
Sbjct: 286 LPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPL 345
Query: 379 ---------EQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPV 429
+Q QP Q Q + + Q +V G++M +A+ A GGM P
Sbjct: 346 KFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMV-APGVQMITEAL-AQGGMHIRARFPP 403
Query: 430 GTQVS 434
T VS
Sbjct: 404 TTAVS 408
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 80.9 bits (198), Expect = 4e-15
Identities = 85/291 (29%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 5 QQQQQLQQQQQQLQQL-------QQQQLQQQQLQQQQLLQLQQLLQQSP---PQAPLPMA 54
Q QQQ+QQQQQQLQ++ QQQQ QQQQ QQQQ LQ Q +QQ P PQ P A
Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQA 285
Query: 55 VSRGL----------PPQQPQQPLLNLQGTNSASLLNGSMLQRALL--LQQLQGNLRGYG 102
+ + L PP QPQQP + N S L + L+ Q L G +
Sbjct: 286 LPQQLQQMHHTQHHQPPPQPQQPPV---AQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ 342
Query: 103 MASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQAR 162
+ AP + P +QQ Q Q+ V + SQ +L
Sbjct: 343 PPLKFVRAPMVVQQPPVQPQVQQ--QQTAVQTAQAAQMVAPGVQVSQSSLP--------- 391
Query: 163 TSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPA 222
SS +P ++ + Q+MP PP+ S + +P + P P + P+
Sbjct: 392 MLSSPSPGQQVQTPQSMP-----PPPQPSPQPGQPSSQPNSNVSSGPAP---SPSSFLPS 443
Query: 223 PEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPD 273
P P+P + S + A+ ++ P+ PG L P + M+ +Q +
Sbjct: 444 PSPQPSQ-SPVTARTPQNFSVPS----PGPLNTPVNPSSVMSPAGSSQAEE 489
Score = 68.6 bits (166), Expect = 2e-11
Identities = 85/329 (25%), Positives = 113/329 (34%), Gaps = 42/329 (12%)
Query: 2 FSQQQQQQLQQQQQQLQQ------------------LQQQQLQQQQLQQQQLLQLQQLLQ 43
F QQQQ LQQQQQQ QQ QQQQLQQQQ QQQ L++L Q
Sbjct: 169 FQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQ 228
Query: 44 QSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQR-----------ALLLQ 92
Q Q + L QQ QQ Q +L +Q+ L Q
Sbjct: 229 QQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQ 288
Query: 93 QLQGNLRGYGMASP--------GLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVP 144
QLQ P PS PPQ T L Q L PP+
Sbjct: 289 QLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFV 348
Query: 145 MNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDP----PEGSEEAAEPRMD 200
P PQ Q + ++ T + + V S P P ++ P+
Sbjct: 349 RAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSM 408
Query: 201 TPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQ 260
P Q P + ++ + P P +S LP+ + S+ P P V +
Sbjct: 409 PPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGP 468
Query: 261 ARMTV-PKQTQTPDLLPEALEAQVLPRFQ 288
V P +P +A E Q L + +
Sbjct: 469 LNTPVNPSSVMSPAGSSQAEEQQYLDKLK 497
Score = 68.2 bits (165), Expect = 3e-11
Identities = 93/365 (25%), Positives = 129/365 (35%), Gaps = 47/365 (12%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQQQQQ QQQQQ Q QQQQ QQQQ Q QQ QQ Q L QQ
Sbjct: 163 QQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQ-------QQQ 215
Query: 64 PQQPLLNLQGTNSASL-LNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPN 122
QQ L+ L N + LQR LQ Q + A PP + P
Sbjct: 216 QQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPP-IQQPP 274
Query: 123 LQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN---PQKQARTSSSTTPNRKDSSSQTM 179
+QQ P PP +P Q + + + PQ Q + P++ SQT
Sbjct: 275 MQQPQP---------PPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQ 325
Query: 180 PVEDKSDPPEGSEEAAEPRMD---TPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAK 236
P+ ++ G +P + P PP + +++ A + P
Sbjct: 326 PLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQV--QQQQTAVQTAQAAQMVAPGV 383
Query: 237 RLRSSEEPTEKEP-PGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQ 295
++ S P P PGQ Q QTP +P + P QP Q
Sbjct: 384 QVSQSSLPMLSSPSPGQ---------------QVQTPQSMPPPPQPSPQPG-QPS-SQPN 426
Query: 296 AQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQV 355
+ V S P S P+ + T +P++ + L P + P
Sbjct: 427 SNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPS---PGPLNTPVNPSSVMSPAG 483
Query: 356 HTQAQ 360
+QA+
Sbjct: 484 SSQAE 488
Score = 64.7 bits (156), Expect = 3e-10
Identities = 88/333 (26%), Positives = 135/333 (40%), Gaps = 61/333 (18%)
Query: 222 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 281
AP ++ P +L+ + +++ Q Q + Q QA + +Q Q +A ++
Sbjct: 137 APHSMAVVSTATPQTQLQLQQVALQQQQQQQ-QFQQQQQAALQQQQQQQQQQQF-QAQQS 194
Query: 282 QVLPRFQPRVLQVQA-QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQ 340
+ +FQ V Q Q Q Q Q Q + Q Q ++Q+Q Q L LQQ+Q Q Q
Sbjct: 195 AMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQ 254
Query: 341 LQQEAEPQK-QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQT 399
QQ+ + Q Q QP + QP +Q + PP+Q Q +Q H H QP P+Q
Sbjct: 255 QQQQQQQQALQAQPPIQ---QPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQ---PQQP 308
Query: 400 PVVVHVCGLEMPP---------DAVEAGGGMEKTLP-------------EPVGTQVSMEE 437
PV + ++PP A G M T P PV QV ++
Sbjct: 309 PVAQNQPS-QLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQ 367
Query: 438 IQNESACGLDVGECENRAREM--PGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPS-- 493
++A +A +M PGV + SL + S + + + P P+PS
Sbjct: 368 TAVQTA----------QAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQ 417
Query: 494 ---------DSVSSTPAAT-----STPSKQALQ 512
+VSS PA + +PS Q Q
Sbjct: 418 PGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQ 450
Score = 31.6 bits (70), Expect = 3.1
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 307 PSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQE---------AEPQKQVQPQVHT 357
P + + P T T L LQQ +Q Q QQ+ + Q+Q Q Q
Sbjct: 130 PPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQF 189
Query: 358 QAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQ 388
QAQ S Q+ Q VQ +Q +Q Q
Sbjct: 190 QAQQSAMQQQF---QAVVQQQQQLQQQQQQQ 217
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 78.6 bits (192), Expect = 2e-14
Identities = 120/425 (28%), Positives = 151/425 (35%), Gaps = 45/425 (10%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQL-QQQQLQQQQL--LQLQQLLQQSPPQAPLPMAVSRGLP 60
Q QQQQ QQQQQLQQ QQQQL QQQQLQQQQL Q QQ LQQ Q
Sbjct: 3899 QLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQ 3958
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGM--------ASPGLAAPS 112
QQ QQ Q LLN S + QQ Q G GM +SPG P+
Sbjct: 3959 QQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKPLQHFSSPGALGPT 4018
Query: 113 LTPPQLATPNLQQFFPQATRQSLLGPPP-VGVPMNPSQFNLSGRNPQKQARTSSSTTPNR 171
L L P + ++ GP G P+ G P+ A P+
Sbjct: 4019 LL---LTGKEQNTVDPAVSSEATEGPSTHQGGPL------AIGTTPESMATEPGEVKPS- 4068
Query: 172 KDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEAS 231
SQ + V+ + P S + P + Q EAS
Sbjct: 4069 LSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEAS 4128
Query: 232 ELPAKRLRSSEEPTEKEPPGQLQVK----AQPQARMTVPKQT--QTPDLLPEALEAQVLP 285
+P L + + + PG + QP + T Q P P Q LP
Sbjct: 4129 SVP--HLLAQPSVSLGDQPGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPVLQSGQGLP 4186
Query: 286 --RFQPRVLQVQAQVQS--QTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL 341
P V Q++AQ+Q P++ Q Q +LQ + LQQ Q Q
Sbjct: 4187 GVGIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQ------LQQSQAVRQT 4240
Query: 342 QQEAEPQKQVQP-QVHTQAQPSV----QPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 396
EP Q P Q QP + PQ P ++ P Q + P P
Sbjct: 4241 PPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPPGALSTGP 4300
Query: 397 EQTPV 401
PV
Sbjct: 4301 VLGPV 4305
Score = 75.5 bits (184), Expect = 2e-13
Identities = 110/438 (25%), Positives = 163/438 (37%), Gaps = 71/438 (16%)
Query: 4 QQQQQQLQQQQQQ----LQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAP-----LPMA 54
Q+Q Q+++QQ++ + + + +Q QQQQ QQQQ Q +L SP Q+P LP
Sbjct: 3575 QKQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKLPGQ 3634
Query: 55 VSRGLPPQQPQQP--------LLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYG-MAS 105
+ G Q PQ P L G G L AL QQ Q + G G +A
Sbjct: 3635 LLPGHGLQPPQGPPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSLAG 3694
Query: 106 PG-------LAAPSLTPP----------------QLATPNLQQFFPQATRQSLLGPPPVG 142
P LA SL P QLA QQ Q +Q LLG +
Sbjct: 3695 PSGGFFPGNLALRSLGPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAI- 3753
Query: 143 VPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKS-DPPEGSEEAAEPRMDT 201
Q G Q SS Q + V+ S PP+G +
Sbjct: 3754 -----QQQQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGM------- 3801
Query: 202 PEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQA 261
L P + +++ A P+ P +++ ++ P Q +
Sbjct: 3802 -----LGPAQVAVLQQQHPGALGPQG------PHRQVLMTQSRVLSSPQLAQQGQGLMGH 3850
Query: 262 RMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQA 321
R+ +Q Q + L Q ++ Q + QP Q Q +LQ+Q
Sbjct: 3851 RLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQ 3910
Query: 322 QTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQT 381
Q Q + + QQ+Q+Q Q Q+ + Q+Q+Q Q Q Q Q+ Q Q +Q
Sbjct: 3911 QLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQ-----QQQQQLQQQQQQQQQQ 3965
Query: 382 HEQPHTQPQVSLLAPEQT 399
+Q Q Q+ LL +T
Sbjct: 3966 FQQQQQQQQMGLLNQSRT 3983
Score = 63.2 bits (152), Expect = 1e-09
Identities = 98/423 (23%), Positives = 148/423 (34%), Gaps = 81/423 (19%)
Query: 4 QQQQQQLQQQQQQL-QQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQ 62
Q++Q QLQQQ+ QL Q+LQQQ QQQ QQQQ L Q +QQ Q P P
Sbjct: 3717 QERQLQLQQQRMQLAQKLQQQ---QQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKP 3773
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPN 122
Q P + QG LL+QQL S PPQ
Sbjct: 3774 QGLMPPSSHQG---------------LLVQQL-----------------SPQPPQ----- 3796
Query: 123 LQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVE 182
Q +LGP V V L + P +Q + S + + Q +
Sbjct: 3797 --------GPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSSPQLAQQGQGLM 3848
Query: 183 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC-EASELPAKRLRSS 241
++ + L + + P +P +L ++
Sbjct: 3849 GHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQ 3908
Query: 242 EEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 301
++ +++ QLQ + Q Q + +Q Q + L+ Q + Q + Q+Q Q Q Q
Sbjct: 3909 QQQLQQQQQQQLQQQQQLQQQQLQQQQQQ------QQLQQQQQQQLQQQQQQLQQQ-QQQ 3961
Query: 302 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQP-----QLQQEAEP--------- 347
Q + Q Q L Q++T SP+ QQ + P LQ + P
Sbjct: 3962 QQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKPLQHFSSPGALGPTLLL 4021
Query: 348 ----QKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVS------LLAPE 397
Q V P V ++A + P + P E +P +S L+ P+
Sbjct: 4022 TGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGEVKPSLSGDSQLLLVQPQ 4081
Query: 398 QTP 400
P
Sbjct: 4082 PQP 4084
Score = 62.4 bits (150), Expect = 2e-09
Identities = 84/302 (27%), Positives = 117/302 (38%), Gaps = 41/302 (13%)
Query: 106 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSS 165
P L+PP +P P+A+R L PPP PM+P P + +R S
Sbjct: 601 PPFEESPLSPPPEESPLSPP--PEASR---LSPPPEDSPMSPPPEESPMSPPPEVSRLSP 655
Query: 166 STTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEP 225
+R + P+ S PPE S P PE L P PED +P P
Sbjct: 656 LPVVSRLSPPPEESPL---SPPPEES-----PTSPPPEASRLSPPPED-----SPTSPPP 702
Query: 226 EPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLP 285
E AS P L S P E+ P L + +PQ + +++ P L P E + P
Sbjct: 703 EDSPASPPPEDSLMSL--PLEESP--LLPLPEEPQ----LCPRSEGPHLSPRPEEPHLSP 754
Query: 286 RFQPRVLQVQA-QVQSQTQPRIPS-TDTQVQPKLQKQAQ---TQTSPEHLVLQQKQVQPQ 340
R + L QA + QP P +P L QA+ PE L L + +P
Sbjct: 755 RPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPH 814
Query: 341 LQQ-EAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP-PEQTHEQPHTQPQVSLLAPEQ 398
L EP QP+ + + PQ P + P PE++H P + PE+
Sbjct: 815 LSPVPEEPCLSPQPE-----ESHLSPQSEEPC---LSPRPEESHLSPELEKPPLSPRPEK 866
Query: 399 TP 400
P
Sbjct: 867 PP 868
Score = 55.5 bits (132), Expect = 2e-07
Identities = 123/493 (24%), Positives = 168/493 (34%), Gaps = 100/493 (20%)
Query: 1 MFSQQQQQQLQQQQQQ-----LQQLQQQQLQ---------------QQQLQQQQLLQLQQ 40
+ + QQQQQ QQ QQQ L LQQ + QQ QQQQL Q QQ
Sbjct: 3852 LVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQ 3911
Query: 41 LLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRG 100
L QQ Q + + QQ QQ L Q + Q+ QQ Q +
Sbjct: 3912 LQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQ--QQQQQQFQQQ 3969
Query: 101 YGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQ-FNLSGR---- 155
GL S T L +P QQ +Q LGP G+P P Q F+ G
Sbjct: 3970 QQQQQMGLLNQSRT---LLSPQQQQ-----QQQVALGP---GMPAKPLQHFSSPGALGPT 4018
Query: 156 -----NPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPC 210
Q + S+ S+ Q P+ + P + E E + D L
Sbjct: 4019 LLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGEVKPSLSGDSQLLLV 4078
Query: 211 PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEK-------EPPGQLQVKAQPQARM 263
P P+P+P P RL ++ GQL + +A
Sbjct: 4079 ---------QPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEA-S 4128
Query: 264 TVPKQTQTPDL----LPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPS----------- 308
+VP P + P ++ +L QP ++ +Q+ T P+ P
Sbjct: 4129 SVPHLLAQPSVSLGDQPGSMTQNLLGPQQP---MLERPMQNNTGPQPPKPGPVLQSGQGL 4185
Query: 309 -------TDTQVQPKLQKQAQTQTSPEHL-VLQQKQVQPQLQQEAEPQKQVQPQVHTQAQ 360
T Q++ +LQ HL QQ+Q+Q L Q Q Q Q +
Sbjct: 4186 PGVGIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQE 4245
Query: 361 PSVQPQEHPPAQ--VSVQPPEQTHEQPHTQPQVSLLA---PEQTPVVVHVCGLEMPPDAV 415
P Q P Q + QP P T P L A P+ P L PP A+
Sbjct: 4246 PGTQTS---PLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPP------RLPAPPGAL 4296
Query: 416 EAGGGMEKTLPEP 428
G + P P
Sbjct: 4297 STGPVLGPVHPTP 4309
Score = 48.1 bits (113), Expect = 3e-05
Identities = 72/299 (24%), Positives = 113/299 (37%), Gaps = 30/299 (10%)
Query: 113 LTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS---SSTTP 169
L+PP +P P+A+R L PPP +P +P L P +++ S +
Sbjct: 449 LSPPPEESPTSPP--PEASR---LSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPL 503
Query: 170 NRKDSSSQTMPVEDKS-DPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC 228
+ SS P+E+ PPE E P ++TP P E+ +P PE
Sbjct: 504 SPPPESSPFSPLEESPLSPPE--ESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEEL 561
Query: 229 EASELP-AKRLR-SSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPR 286
S P A RL EE PP + + P+A P ++P L P E+ + P
Sbjct: 562 PTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESP-LSPPPEESPLSP- 619
Query: 287 FQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAE 346
S+ P P D+ + P +++ PE L V +L E
Sbjct: 620 ---------PPEASRLSP--PPEDSPMSPP-PEESPMSPPPEVSRLSPLPVVSRLSPPPE 667
Query: 347 PQKQVQPQVHTQAQPSVQPQE-HPPAQVS--VQPPEQTHEQPHTQPQVSLLAPEQTPVV 402
P + P + PP + S PPE + P + + L E++P++
Sbjct: 668 ESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLL 726
Score = 47.4 bits (111), Expect = 5e-05
Identities = 95/416 (22%), Positives = 158/416 (37%), Gaps = 63/416 (15%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQ--------QSPPQAPLPMAV 55
+ ++++LQ++QQ QLQ Q QQQQ QQ LL Q SP A +
Sbjct: 3254 EHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPAQAMSLPHEGSSPSLAGSQQQL 3313
Query: 56 SRGLP-PQQP--QQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPS 112
S GL +QP QPL+ Q A LQ+ L + +G+ ++
Sbjct: 3314 SLGLAGARQPGLPQPLMPTQPPAHA-------LQQRLAPSMAMVSNQGHMLSGQHGGQAG 3366
Query: 113 LTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRK 172
L P Q + P L Q +G P + M P Q + Q + ++S P
Sbjct: 3367 LVPQQSSQPVLS--------QKPMGTMPPSMCMKPQQLAM-------QQQLANSFFP--- 3408
Query: 173 DSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQ-DLPPCP------EDIAKEKRTPAPEP 225
D+ ED DP ++ A + Q + P + ++ + P
Sbjct: 3409 DTDLDKFAAEDIIDPIAKAKMVALKGIKKVMAQGSIGVAPGMNRQQVSLLAQRLSGGPSS 3468
Query: 226 EPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLP 285
+ + + RS+ +P++ P Q + Q Q + L Q L
Sbjct: 3469 DLQNHVAAGSGQERSAGDPSQPRP----NPPTFAQGVINEADQRQYEEWL---FHTQQLL 3521
Query: 286 RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL-QQKQVQPQLQQE 344
+ Q +VL+ Q V +++ + + + ++ + LV QQ ++Q QL Q
Sbjct: 3522 QMQLKVLEEQIGVHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQKQLDQV 3581
Query: 345 AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 400
+ QK+ HT E+ Q Q +Q +Q H+ V L+P Q+P
Sbjct: 3582 RKQQKE-----HTNLM-----AEYRNKQQQQQQQQQQQQQQHS--AVLALSPSQSP 3625
Score = 43.5 bits (101), Expect = 8e-04
Identities = 70/328 (21%), Positives = 108/328 (32%), Gaps = 53/328 (16%)
Query: 102 GMASPG---LAAPSLTPPQLATPN---------LQQFFPQATRQSLLGPPPVGVPMNPSQ 149
G SPG L P P Q+ + + L+ FP A P P G P P
Sbjct: 2152 GPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPM 2211
Query: 150 FNLSGRNPQKQA---RTSSSTTPNRKDSSSQTM-----PVEDKSDPPE----GSEEAAEP 197
S R Q T+ TP + S+ P D PE G +A+EP
Sbjct: 2212 LGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEP 2271
Query: 198 RMDTPEDQDLPPCPEDIAKEKRTPAPE---------PEPCEASELPAKRLRSSE------ 242
+ P + E +E +P P + L L++ +
Sbjct: 2272 LLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPL 2331
Query: 243 ----EPTEKEPPGQ-LQVKAQPQARMTVPKQTQTPDLLPEA------LEAQVLPRFQPRV 291
E + PG L+ + P A+ P PD+ + + PR QP
Sbjct: 2332 TPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPP 2391
Query: 292 LQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQV 351
+ + ++ P P + P+ Q +Q+ +P L + P + P
Sbjct: 2392 PESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYS 2451
Query: 352 QPQVHTQAQPSVQPQEHPPAQVSVQPPE 379
+P Q++ P PP QPPE
Sbjct: 2452 RPPSRPQSRDPFAPLHKPPRP---QPPE 2476
Score = 37.4 bits (85), Expect = 0.057
Identities = 72/350 (20%), Positives = 121/350 (34%), Gaps = 50/350 (14%)
Query: 180 PVEDKSDPPEGSEEAAEPRMDTPEDQDLP----------PCPEDIAKEKRTPAPEPEPCE 229
P+ + PP ++ A+EPR+ + + P PC IA K PAP
Sbjct: 3093 PLGPEERPPPAAD-ASEPRLASVLPEVKPKVEEGGRHPSPCQFTIATPKVEPAPAANSLG 3151
Query: 230 ASELPAKRLRSSEEPTEKEPP----GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLP 285
P + + S + P G KA A P TP L + +L
Sbjct: 3152 LGLKPGQSMMGSRDTRMGTGPFSSSGHTAEKASFGATGGPPAHLLTPSPLSGPGGSSLLE 3211
Query: 286 RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEA 345
+F+ + + T P P+ K++ P L + + ++E
Sbjct: 3212 KFE-------LESGALTLPGGPAASGDELDKMESSLVASELP----LLIEDLLEHEKKEL 3260
Query: 346 EPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHV 405
+ ++Q+ Q+ Q Q Q+H + +S P Q PH SL +Q
Sbjct: 3261 QKKQQLSAQLQPAQQQQQQQQQH--SLLSAPGPAQAMSLPHEGSSPSLAGSQQQL----- 3313
Query: 406 CGLEMPPDAVEAGGGMEKTLPEP-VGTQVSMEEIQNESACGLDVGECENRAREMPGVWGA 464
++ G + LP+P + TQ +Q A + + N+ + G G
Sbjct: 3314 --------SLGLAGARQPGLPQPLMPTQPPAHALQQRLAPSMAM--VSNQGHMLSGQHGG 3363
Query: 465 GGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFF 514
L + Q S S P+ +P S+ P + + A FF
Sbjct: 3364 QAGL---VPQQSSQPVLSQKPMGTMP---PSMCMKPQQLAMQQQLANSFF 3407
Score = 37.0 bits (84), Expect = 0.074
Identities = 74/378 (19%), Positives = 119/378 (31%), Gaps = 57/378 (15%)
Query: 105 SPGLAAPSLTP----PQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQ 160
SP P L+P P L+ + + + L P P ++P P
Sbjct: 807 SPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPEL-----EKPPLS 861
Query: 161 ARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDI---AKE 217
R + + + +P+ P S EP + P + L P PE++
Sbjct: 862 PRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSG 921
Query: 218 KRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQV------KAQPQARMTVPKQTQT 271
+ + +P+ P + P + ++ P P G+L+ + P++ + P
Sbjct: 922 EPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAP----- 976
Query: 272 PDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSP--EH 329
LE + P + + P S P L + Q SP +H
Sbjct: 977 ------ILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQH 1030
Query: 330 LVLQQKQVQPQLQQEAEPQKQVQP--------------QVHTQAQPSVQPQEHPPAQVSV 375
++ Q Q A P P ++H V E P +
Sbjct: 1031 SLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALE--- 1087
Query: 376 QPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGL---EMPPDAVEAGGGMEKTLPEPVGTQ 432
P T P +S AP P + GL P D ++A G PEP T
Sbjct: 1088 --PSATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQ----PEPGQTP 1141
Query: 433 VSMEEIQNESACGLDVGE 450
S+ S LD E
Sbjct: 1142 GSLASELKGSPVLLDPEE 1159
Score = 30.8 bits (68), Expect = 5.3
Identities = 69/273 (25%), Positives = 99/273 (36%), Gaps = 70/273 (25%)
Query: 5 QQQQQLQQQQQQLQQLQ-QQQLQQQQLQQQQLLQLQQLLQQSP-------PQAPLPMAVS 56
Q + + Q+Q+Q+L++L +QQ+Q+ L+Q++ P P +P +S
Sbjct: 2674 QTELEKQRQRQRLRELLIRQQIQRNTLRQEKETAAAAAGAVGPPGSWGAEPSSPAFEQLS 2733
Query: 57 R---------------GLPPQQPQQPLL--------------------NLQGTNSASLLN 81
R GLPP + P+L + NS L+
Sbjct: 2734 RGQTPFAGTQDKSSLVGLPPSKLSGPILGPGSFPSDDRLSRPPPPATPSSMDVNSRQLVG 2793
Query: 82 GS--MLQRA-----LLLQQLQGNLRGYGMASPGLAA--------PSLTPPQLATPNLQQF 126
GS QRA L LQQ Q L A+ + PS P+L L
Sbjct: 2794 GSQAFYQRAPYPGSLPLQQQQQQLWQQQQATAATSMRFAMSARFPSTPGPELGRQALGS- 2852
Query: 127 FPQATRQSLLGPP--PVGVPMNPSQFNLSGRNPQKQARTSSSTTPNR-KDSSSQTMPVED 183
P A + L P PV P P+QF N QK + P + + PV +
Sbjct: 2853 -PLAGISTRLPGPGEPVPGPAGPAQFIELRHNVQKGLGPGGTPFPGQGPPQRPRFYPVSE 2911
Query: 184 KSDP----PEGSEEAAEPRMDTPEDQDLPPCPE 212
DP PEG A + P+ PP PE
Sbjct: 2912 --DPHRLAPEGLRGLAVSGL-PPQKPSAPPAPE 2941
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 78.6 bits (192), Expect = 2e-14
Identities = 122/456 (26%), Positives = 167/456 (36%), Gaps = 112/456 (24%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQ------------------------------ 33
+QQQQQ QQQQQQ QQ QQQQ QQQQ QQQ
Sbjct: 2718 RQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTP 2777
Query: 34 -QLLQLQQLLQQSPPQAPLPMA------------VSRGLPPQQPQQPLLNLQGTNSASLL 80
L+++Q+ Q PPQ P P A V PPQQ L + +LL
Sbjct: 2778 EHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALL 2837
Query: 81 NGSM---LQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLG 137
G+ LQ A L + L+ G AP LA P + P A S
Sbjct: 2838 TGTTVANLQVARLTRVPTSQLQAQGQMQ--TQAPQPAQVALAKPPVVS-VPAAVVSS--- 2891
Query: 138 PPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEP 197
P +PMN + +++ PQK A G A+P
Sbjct: 2892 PGVTTLPMNVAGISVAIGQPQKAA----------------------------GQTVVAQP 2923
Query: 198 RMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKA 257
Q L + ++++ A +P+ + +++ + + T PG A
Sbjct: 2924 ----VHMQQLLKLKQQAVQQQK--AIQPQAAQGPAAVQQKITAQQITT----PG-----A 2968
Query: 258 QPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKL 317
Q + +T L +AQ L Q QVQ Q+Q P++ T V
Sbjct: 2969 QQKVAYAAQPALKTQFLTTPISQAQKLAGAQ----QVQTQIQVAKLPQVVQQQTPVASIQ 3024
Query: 318 Q-KQAQTQTSPEHLVL-------QQKQVQPQLQQEAE--PQKQVQPQVHTQAQPSVQPQE 367
Q A Q SP+ + L QQ Q+ P + A+ QK +Q QV T A +Q
Sbjct: 3025 QVASASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAPLQTPG 3084
Query: 368 HP-PAQV--SVQPPEQTHEQPHTQPQVSLLAPEQTP 400
P PAQV S P Q + P V L P + P
Sbjct: 3085 APNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTKPP 3120
Score = 59.7 bits (143), Expect = 1e-08
Identities = 96/423 (22%), Positives = 146/423 (34%), Gaps = 62/423 (14%)
Query: 22 QQQLQQQQLQQQQLLQLQ--QLLQQSPPQAPLPMAVS----RGLPPQQPQ---QPLLNLQ 72
QQ+ QQ + Q Q Q QQ PP P P A G P QPQ QP Q
Sbjct: 2495 QQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQ 2554
Query: 73 GTNSASLLNGSML---QRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQ 129
+ + ++ A+L ++ ++ G M + ++ + N P
Sbjct: 2555 PVQAPAKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIV-------NTIAGVPA 2607
Query: 130 ATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPE 189
AT QS+ + P+ P G + Q + P S + P +
Sbjct: 2608 ATFQSI--NKRLASPVAPGALTTPGGSAPAQV-VHTQPPPRAVGSPATATPDLVSMATTQ 2664
Query: 190 GSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEP 249
G +L P + R+ P+ +LP K +
Sbjct: 2665 GVRAVTSVTASAVVTTNLTP----VQTPARSLVPQVSQATGVQLPGKTI----------T 2710
Query: 250 PGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPST 309
P Q+ Q Q + +Q Q Q + Q + Q Q Q + +Q ++P
Sbjct: 2711 PAHFQLLRQQQQQQQQQQQQQ-----------QQQQQQQQQQQQQQQQTTTTSQVQVPQI 2759
Query: 310 DTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQ---VQPQVHTQAQPSVQPQ 366
Q Q Q +A + +PEHL+ QKQ Q PQ Q QP Q Q S PQ
Sbjct: 2760 QGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQ 2819
Query: 367 EHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGL-EMPPDAVEAGGGMEKTL 425
+ P +V T P+ L T + V L +P ++A G M+
Sbjct: 2820 QQSPQLTTV-----------TAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQA 2868
Query: 426 PEP 428
P+P
Sbjct: 2869 PQP 2871
Score = 38.9 bits (89), Expect = 0.019
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 28/120 (23%)
Query: 204 DQDLPPCP------EDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKA 257
D+ LPP E IAKEK+ A + + +++P +PP
Sbjct: 2469 DKPLPPIQVASLRAERIAKEKKALADQ--------------QKAQQPAVAQPP------- 2507
Query: 258 QPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKL 317
PQ + P Q Q P LP+ A P P +Q Q Q Q QTQP+ + QP +
Sbjct: 2508 PPQPQPPPPPQ-QPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAI 2566
Score = 36.2 bits (82), Expect = 0.13
Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 133 QSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQT-MPVEDKSDPPEGS 191
Q L+ G+P P L+G+ +Q S+ P + +S T +P PP G
Sbjct: 506 QQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTGPPVQNAASLHTPLPQLPGRLPPAGV 565
Query: 192 EEAA---------EPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSE 242
AA +P++ + Q P K ++ P P P +S+LP + ++
Sbjct: 566 PTAALSSALQFAQQPQVVEAQTQLQIP-----VKTQQPNVPIPAP-PSSQLPIPPSQPAQ 619
Query: 243 EPTEKEPPGQLQVKAQ-----PQ----ARMTVPKQTQTPDLLPEALEAQVLP-------- 285
PG++QV+A PQ R+ V P LP + + + P
Sbjct: 620 LALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGP 679
Query: 286 ---------RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 336
R + + V S+T + S T+ Q Q +Q S + + +Q
Sbjct: 680 SPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQIT 739
Query: 337 VQPQLQQ 343
++ Q+ Q
Sbjct: 740 LENQVHQ 746
Score = 34.3 bits (77), Expect = 0.48
Identities = 64/313 (20%), Positives = 102/313 (32%), Gaps = 51/313 (16%)
Query: 272 PDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLV 331
P + +L A+ + + + + L Q + Q + P Q P Q+ P+
Sbjct: 2473 PPIQVASLRAERIAK-EKKALADQQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAG 2531
Query: 332 LQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQV 391
Q P +Q + +PQ Q QPQ VQ P + T
Sbjct: 2532 SQPPAGPPAVQPQPQPQPQTQPQ-------------------PVQAPAKAQPAITTGGSA 2572
Query: 392 SLLAPEQTPVVVHVCGLEMPPDAVEAG--------------GGMEKTLPEPVGTQV---- 433
++LA + V G MP AV + K L PV
Sbjct: 2573 AVLA---GTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTP 2629
Query: 434 ---SMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVP 490
+ ++ + VG ++ + G VT + +S A T LTPV
Sbjct: 2630 GGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTAS---AVVTTNLTPVQ 2686
Query: 491 RPSDSV---SSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHM 547
P+ S+ S P K + + QQ+ Q + Q QQ+ + Q
Sbjct: 2687 TPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQ-QQQQQQQQQQQQQQQQQQQQQQQQQ 2745
Query: 548 SQACLLSLLPVPR 560
Q S + VP+
Sbjct: 2746 QQTTTTSQVQVPQ 2758
Score = 33.9 bits (76), Expect = 0.63
Identities = 48/190 (25%), Positives = 67/190 (35%), Gaps = 23/190 (12%)
Query: 85 LQRALLLQQLQGNLRGYGMASPG--LAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVG 142
L+ + L Q +Q YG G +A PS PP+ A P PQ L G PP+
Sbjct: 1421 LKASRLFQPVQ-----YGQKPEGRTVAFPSTHPPRTAAPTTASAAPQG---PLRGRPPIA 1472
Query: 143 V-PMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDT 201
NP + QA S+ SS+ P + + +A+ P
Sbjct: 1473 TFSANPEAKAAAAPFQTSQASASAPRHQPASASSTAASPAHPAKLRAQTTAQASTPGQPP 1532
Query: 202 PEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQA 261
P+ P P A + P P +A RL S E QL PQ+
Sbjct: 1533 PQ----PQAPSHAAGQSALPQRLVLPSQAQ----ARLPSG----EVVKIAQLASITGPQS 1580
Query: 262 RMTVPKQTQT 271
R+ P+ T
Sbjct: 1581 RVAQPETPVT 1590
Score = 32.3 bits (72), Expect = 1.8
Identities = 76/291 (26%), Positives = 102/291 (35%), Gaps = 59/291 (20%)
Query: 289 PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHL--------VLQQKQVQPQ 340
P+ Q+ Q QSQ Q PST VQ P L L Q
Sbjct: 520 PQAAQLAGQRQSQQQYD-PSTGPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQ 578
Query: 341 LQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHE---QPHTQPQVSLLAPE 397
Q E Q Q+Q V TQ QP+V P PP+ PP Q + T +V + A +
Sbjct: 579 QPQVVEAQTQLQIPVKTQ-QPNV-PIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQ 636
Query: 398 QTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRARE 457
+ + V +P D P P+ T S + S G
Sbjct: 637 LSSLPQMVASTRLPVDPA-------PPCPRPLPTS-STSSLAPVSGSG------------ 676
Query: 458 MPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYI 517
PG A S V S+ ++A S V R V+S P +P++ A
Sbjct: 677 -PGPSPARSS-PVNRPSSATNKALSPV----TSRTPGVVASAPTKPQSPAQNA------- 723
Query: 518 CKASCSSQQEFQDHMSEP-----QHQQRLGEIQH---MSQACLLSLLPVPR 560
SSQ QD ++E Q QR+ E++ SQ L L PR
Sbjct: 724 ----TSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPR 770
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 75.5 bits (184), Expect = 2e-13
Identities = 123/483 (25%), Positives = 180/483 (37%), Gaps = 92/483 (19%)
Query: 2 FSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSP----PQAPLPMAVSR 57
F Q QQQQ QQQQQ QQ QQQQ QQQQ QQ Q QQ QQ P PQ P V
Sbjct: 257 FPQLQQQQQQQQQQ--QQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVP- 313
Query: 58 GLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLA---APSLT 114
+PP Q P LQ + L + L G ++ A P LA PS
Sbjct: 314 -VPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHP 372
Query: 115 PPQLATPNLQQF-----FPQATRQSLLGPP--------PVGVPMNPSQFNLSGRNPQKQA 161
PP + Q FPQ + P P VP Q +L+ ++P
Sbjct: 373 PPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSP 432
Query: 162 RT----SSSTTPNRKDSSSQTMPVEDKSDP-PEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
+ S +++P + Q P +++P P+G ++ P Q P +
Sbjct: 433 SSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVM 492
Query: 217 EKRTPAPEPEPCE--ASELPAKRLRSSEEPTEKEP---PGQLQVKAQPQARMTVPKQTQT 271
+++ P P+ +P KRL + P GQ+ P T P +
Sbjct: 493 QQQPPNQGPQSLHPGLGGMP-KRLPPGFSAGQANPNFMQGQV-----PSTTATTPGNSGA 546
Query: 272 PDLL--------------PEALEAQVL----PRFQPRVLQVQAQVQSQTQ-----PRIPS 308
P L P + QV QP ++ + + +Q P++
Sbjct: 547 PQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNL 606
Query: 309 TDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQ-----VHTQAQPSV 363
++ Q QP+ Q P L+ +Q+ P Q + Q + PQ Q P
Sbjct: 607 SNMQGQPQ-------QGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQG 659
Query: 364 QPQEHPPAQ------VSVQPPEQTHEQ-------PHTQ---PQVSLLAPEQTPVVVHVCG 407
Q +PP+Q + PP+Q Q PH Q PQ +L +Q P++ +
Sbjct: 660 QMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLL-QQNPMIEQIMT 718
Query: 408 LEM 410
+M
Sbjct: 719 NQM 721
Score = 60.1 bits (144), Expect = 8e-09
Identities = 111/464 (23%), Positives = 165/464 (35%), Gaps = 83/464 (17%)
Query: 1 MFSQQQQ---QQLQQQQQQLQQLQQQQLQQQQL---QQQQLLQLQQLLQQ-----SPPQA 49
M Q QQ QL QQ+ Q Q +QQQ Q +L QL+ Q +PP
Sbjct: 609 MQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQ 668
Query: 50 PLPMAVSRGLPPQQ------PQQ--PLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGY 101
L + R PP+Q PQ P + G LL + + ++ Q+QGN + +
Sbjct: 669 NLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQF 728
Query: 102 GMASPGLAAPSLTPPQL---ATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQ 158
+ P P Q+ TPN+Q Q T Q P P+N S + G Q
Sbjct: 729 NTQNQSNVMPG--PAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQ 786
Query: 159 -----------KQARTSSSTTPNRKDSSSQTMP----VEDKSDPP-----EGSEEAAE-- 196
Q +TT N S SQ MP + PP +G+ +
Sbjct: 787 VLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNSASGNHF 846
Query: 197 ---------PRMDTPEDQDLPPCPED----IAKEKRTPAPEPEPCEASELPAKR--LRSS 241
P P + C ++ + K+ +P S++ A + +
Sbjct: 847 SGHGMSFNAPFSGAPNGNQM-SCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNK 905
Query: 242 EEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 301
+ T P + K P+ + + TPD P LE QP + Q
Sbjct: 906 QNNTNANKP---KKKKPPRKKKNSQQDLNTPDTRPAGLE----EADQPPLPGEQGINLDN 958
Query: 302 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP 361
+ P++P + P Q Q +Q+ PQL Q P Q PQ Q Q
Sbjct: 959 SGPKLPEFSNR-PPGYPSQPVEQR-------PLQQMPPQLMQHVAPPPQ-PPQQQPQPQL 1009
Query: 362 SVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHV 405
Q Q PP+Q P+ +Q Q + +L +Q P V +
Sbjct: 1010 PQQQQPPPPSQ-----PQSQQQQQQQQQMMMMLMMQQDPKSVRL 1048
Score = 52.4 bits (124), Expect = 2e-06
Identities = 106/448 (23%), Positives = 169/448 (37%), Gaps = 72/448 (16%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLL-QLQQLLQQSPPQ-----APLPMA 54
M SQQ Q + Q + Q LQQ + +Q + Q+Q QQ Q P P
Sbjct: 683 MLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQ 742
Query: 55 VSRGLPPQQPQQPLLNLQGTNSASLL--NGSMLQRALLLQQLQGNLRGYGMASPGLAAPS 112
+ RG P Q ++ G S +L G + + +QG + SP +A
Sbjct: 743 IMRGPTPNM-QGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQH 801
Query: 113 LTPPQLATPN--LQQFFPQAT-RQSLLGPPPV----------------GVPMN------P 147
P A + L Q P + +Q+ + PP V G+ N P
Sbjct: 802 GDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAP 861
Query: 148 SQFNLS-GRNP----QKQARTSSSTTPN--RKDSSSQTMPVEDKSDPPEGSEEAAEPRMD 200
+ +S G+NP K +S N + D S+ V +K + + A +P+
Sbjct: 862 NGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNK----QNNTNANKPKKK 917
Query: 201 TPEDQDLPPCPEDIAKEKRTPAPEPEPCEASE---LPAKRLRSSEEPTEKEPPGQLQVKA 257
P P ++ ++ TP P E ++ LP ++ + + K P +
Sbjct: 918 KP-----PRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLP----EFSN 968
Query: 258 QPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKL 317
+P + P + + +P L V P QP Q Q Q+ Q QP PS QP+
Sbjct: 969 RPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPS-----QPQS 1023
Query: 318 QKQAQTQTSPEHLVLQQKQVQ----PQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 373
Q+Q Q Q +++ Q+ + P Q P+ + P +Q P +Q P V
Sbjct: 1024 QQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPD--SQRMP-MQQSGSVPVMV 1080
Query: 374 SVQPPEQTHEQPHTQPQVSLLAPEQTPV 401
S+Q P P Q + P TP+
Sbjct: 1081 SLQGPASVPPSPDKQ---RMPMPVNTPL 1105
Score = 52.4 bits (124), Expect = 2e-06
Identities = 95/428 (22%), Positives = 153/428 (35%), Gaps = 64/428 (14%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGL-PPQ 62
QQ Q QL QQQQ Q Q QQQQ QQQ ++ L ++QQ P LP VS+ + PP+
Sbjct: 1003 QQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMML--MMQQDPKSVRLP--VSQNVHPPR 1058
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPN 122
P LN +GS+ ++ LQG P+ PP +P+
Sbjct: 1059 GP----LNPDSQRMPMQQSGSV----PVMVSLQG--------------PASVPP---SPD 1093
Query: 123 LQQFFPQATRQSLLGPPPVGVPMNPSQ----FNLSGRNPQKQARTSSSTTPNRKDSSSQT 178
Q+ P PV P+ + + S +NP ++ P S + +
Sbjct: 1094 KQRM-----------PMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEAPS 1142
Query: 179 MPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRL 238
+P + P + M P+ P A ++ P P +
Sbjct: 1143 VPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFP--NV 1200
Query: 239 RSSEEPTEKEPPGQLQVKA-QPQARMTVPKQTQTPD--LLPEALEAQVLPRFQPRV---L 292
+ + + + P + + PQ P T+ + L PE L A + F P++ L
Sbjct: 1201 AAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPL 1260
Query: 293 QVQAQV-----QSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEP 347
+ + Q P Q L +P+ L V Q +
Sbjct: 1261 PPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA 1320
Query: 348 QKQVQPQVHTQAQPSVQPQEHP-PAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP--VVVH 404
K+ P ++ P + P P + + + P+ T +Q +LL + P V+V
Sbjct: 1321 TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLA---SQTNAALLQNVELPRNVLVS 1377
Query: 405 VCGLEMPP 412
L PP
Sbjct: 1378 PTPLANPP 1385
Score = 45.1 bits (105), Expect = 3e-04
Identities = 63/299 (21%), Positives = 94/299 (31%), Gaps = 40/299 (13%)
Query: 116 PQLATPNLQQFFPQATRQSLLGPP-----PVGV--PMNPSQFNLSGRNPQKQARTSSSTT 168
P L+ ++QQ Q+ L PP PV V MNP+ F + Q+Q +
Sbjct: 219 PLLSGLHIQQ---QSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQ 275
Query: 169 PNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP------- 221
++ Q + + + P+ P +PP + P
Sbjct: 276 QQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSL 335
Query: 222 -----------APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQ 270
AP P P + L + + P+ PP + QA P+ +
Sbjct: 336 GTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSN 395
Query: 271 TPDL-LPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEH 329
P+ Q P P LQ QP + + P +Q +SP
Sbjct: 396 PGQFTAPQMKSLQGGPSRVPTPLQ---------QPHLTNKSPASSPSSFQQGSPASSPTV 446
Query: 330 LVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPP--AQVSVQPPEQTHEQPH 386
QQ+ Q PQ QP P VQ PP + QPP Q + H
Sbjct: 447 NQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQSLH 505
Score = 42.0 bits (97), Expect = 0.002
Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 31/185 (16%)
Query: 198 RMDTPEDQDLPPCPEDIAKEKRTPAPEPE-------PCEASELPAKRLRSSEEPTEKEPP 250
RM+ P +PP +++ P P PE P S+ L + P
Sbjct: 175 RMNNPATVMIPP-GGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPS 233
Query: 251 GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTD 310
G L P + P ++ Q+ P P++ Q Q Q Q Q Q +
Sbjct: 234 GSLAPPHHP--------------MQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQ----Q 275
Query: 311 TQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPP 370
Q Q + Q+Q Q + +H Q + ++PQ A Q V P + ++QP PP
Sbjct: 276 QQQQQQQQQQLQARPPQQHQQQQPQGIRPQF--TAPTQVPVPPGWNQLPSGALQP---PP 330
Query: 371 AQVSV 375
AQ S+
Sbjct: 331 AQGSL 335
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 72.0 bits (175), Expect = 2e-12
Identities = 104/407 (25%), Positives = 160/407 (39%), Gaps = 57/407 (14%)
Query: 23 QQLQQQQLQQQQL---LQLQQLLQQSPPQAPLPMAVSRG------LPPQQPQQPLLNLQG 73
QQ+ Q ++ Q + + + +P Q L A S P +PQQ + L
Sbjct: 2090 QQVMTQIIRGQPVSTAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQGQVKLTM 2149
Query: 74 TNSASLLNGSMLQRAL-LLQQLQGNLRGYGMASPG----LAAPSLTPPQLATPN--LQQF 126
L G + L ++ Q QG G P L P Q A PN +Q+F
Sbjct: 2150 AQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTVLPGPGQQLMQAAMPNGTVQRF 2209
Query: 127 F--PQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDK 184
P AT + V + G Q+Q++ S P + +T+P
Sbjct: 2210 LFTPLATTATTASTTTTTVSTTAA-----GTGEQRQSKLS----PQMQVHQDKTLPPAQS 2260
Query: 185 SD--PPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAK----RL 238
S P E + A+P P+ Q P P + + P + + +S +P++
Sbjct: 2261 SSVGPAEAQPQTAQPSAQ-PQPQTQPQSPAQ-PEVQTQPEVQTQTTVSSHVPSEAQPTHA 2318
Query: 239 RSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQ----TPDLLPEALEAQVLPR------FQ 288
+SS+ + Q V+ Q R+ P QT+ TP L ++QV Q
Sbjct: 2319 QSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQ 2378
Query: 289 PRV-LQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQ------PQL 341
P LQ+ +Q Q Q+QP++ S+ + T +SP LQ +Q Q PQL
Sbjct: 2379 PHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQPQVIAVPQL 2438
Query: 342 QQEAEPQKQVQPQV--HTQAQPSVQPQE---HPPAQVSVQPPEQTHE 383
QQ+ + Q+Q QV QAQ S PQ+ P Q+ QTH+
Sbjct: 2439 QQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPIQIQQSSAVQTHQ 2485
Score = 65.9 bits (159), Expect = 1e-10
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 258 QPQARMTVPKQTQTPDLLPEALEAQVLP-RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 316
Q Q++++ Q LP A + V P QP+ Q AQ Q QTQP+ P+ QP+
Sbjct: 2238 QRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPA-----QPE 2292
Query: 317 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ--KQVQPQVHTQAQPSVQPQEHPPAQVS 374
+Q Q + QT + QP Q ++PQ Q QPQ + Q Q V+ Q P+Q
Sbjct: 2293 VQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQS--PSQTR 2350
Query: 375 VQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMP 411
++P + P Q QV + P+ H L++P
Sbjct: 2351 IRPSTPSQLSPGQQSQVQTTTSQPIPIQPHT-SLQIP 2386
Score = 58.2 bits (139), Expect = 3e-08
Identities = 94/422 (22%), Positives = 160/422 (37%), Gaps = 51/422 (12%)
Query: 6 QQQQLQQQQQQLQQLQQQ-----------QLQQQQLQQQQLLQLQQLLQQSPPQAPLPMA 54
QQ Q++ QL QL Q Q Q Q Q QL+ + P Q + A
Sbjct: 2141 QQGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTVLPGPGQQLMQAA 2200
Query: 55 VSRGLPPQQPQQPLLNLQGTNSASLLN--------GSMLQRALLLQQLQGNLRGYGMASP 106
+ G + PL T S + G Q L Q + A
Sbjct: 2201 MPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQS 2260
Query: 107 GLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSS 166
P+ PQ A P+ Q P P P +P+Q + + + T SS
Sbjct: 2261 SSVGPAEAQPQTAQPSAQ-------------PQPQTQPQSPAQPEVQTQPEVQTQTTVSS 2307
Query: 167 TTPNRKD---SSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDL-PPCPEDIAKEKRTPA 222
P+ + S V +S P + + R+ +P + P P ++ +++
Sbjct: 2308 HVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQS-- 2365
Query: 223 PEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQ 282
+ + + +P + S + P++ +P Q QV++ Q + Q P + Q
Sbjct: 2366 -QVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQLQ 2424
Query: 283 VLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTS--PEHLVLQQKQVQPQ 340
+ + QP+V+ V Q+Q Q Q +Q+Q ++ Q Q Q S P+ + LQ + Q
Sbjct: 2425 I-QQPQPQVIAVP-QLQQQVQVL-----SQIQSQVVAQIQAQQSGVPQQIKLQ---LPIQ 2474
Query: 341 LQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 400
+QQ + Q V T SVQ Q Q+ Q ++ +Q + + +L A Q+
Sbjct: 2475 IQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQQIEIKREHTLQASNQSE 2534
Query: 401 VV 402
++
Sbjct: 2535 II 2536
Score = 32.7 bits (73), Expect = 1.4
Identities = 90/469 (19%), Positives = 153/469 (32%), Gaps = 62/469 (13%)
Query: 140 PVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRM 199
P+GVP P + PQ++ SS+ P R ++ QT PV ++ E E E R
Sbjct: 1844 PIGVPETPKETP----TPQRKGLRSSALRPKRPETPKQTGPVIIETWVAEEELELWEIRA 1899
Query: 200 DTPE-DQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQ 258
+++ E AK++ ++ P S+ P +K +
Sbjct: 1900 FAERVEKEKAQAVEQQAKKRLEQQKPTVIATSTTSPTSSTTSTISPAQKVMVAPISGSVT 1959
Query: 259 PQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQA-----QVQSQTQPRIPS----- 308
+M + + +P + F V Q Q+ QVQ + IPS
Sbjct: 1960 TGTKMVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSNSGVVQVQQKVLGIIPSSTGTS 2019
Query: 309 --TDTQVQPKL-------QKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQ--------- 350
T T QP+ T+ V+ Q++P + P +Q
Sbjct: 2020 QQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVITGPQIRPGMTVIRTPLQQSTLGKAIIR 2079
Query: 351 --VQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGL 408
V Q Q Q P +V P P Q SL + T +
Sbjct: 2080 TPVMVQPGAPQQVMTQIIRGQPVSTAVSAPNTVSSTP---GQKSLTSATSTSNI--QSSA 2134
Query: 409 EMPPDAVEAGGGMEKTLPEPV-------GTQVSMEEIQNESACGLDVGECENRAREMPGV 461
PP + G ++ T+ + G Q IQ + G G+ + + + +
Sbjct: 2135 SQPPRPQQ--GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQ---GQTTGQLQLIPQGVTVL 2189
Query: 462 WGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKAS 521
G G L + + + F PL + + ++T + T+ + + Q
Sbjct: 2190 PGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQ------SKL 2243
Query: 522 CSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEP 570
Q QD P +G + Q S P P +T+ + P
Sbjct: 2244 SPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQP----QTQPQSP 2288
Score = 32.0 bits (71), Expect = 2.4
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQ-----QLQQQQLLQLQQLLQQSPPQAPLPMAVSR 57
S + QLQ QQ Q Q + QLQQQ Q+Q Q + Q+Q Q+ +P +
Sbjct: 2416 SSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQ------AQQSGVPQQIKL 2469
Query: 58 GLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQ 95
LP Q Q + + N +Q A + +QLQ
Sbjct: 2470 QLPIQIQQS-----SAVQTHQIQNVVTVQAASVQEQLQ 2502
Score = 31.6 bits (70), Expect = 3.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
Query: 629 HKDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEE 681
+ D E + E+++ ++E+ +GD EE +D ED+EE E+EE+
Sbjct: 126 YDDHESEEEEEEEDMVSEEEEEE---------DGDAEETQDSEDDEEDEMEED 169
Score = 30.0 bits (66), Expect = 9.0
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 208 PPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPK 267
P P A E+ PAP P P + P LRS + + Q + P+ R++ P+
Sbjct: 9 PKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPR 68
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 68.9 bits (167), Expect = 2e-11
Identities = 98/397 (24%), Positives = 149/397 (37%), Gaps = 41/397 (10%)
Query: 13 QQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQ 72
++Q L QLQQ Q Q Q Q Q +LQ L PP P P+ G QP P +
Sbjct: 54 REQHLAQLQQLQ-QMHQKQMQCVLQPHHL--PPPPLPPPPVMPGGGYGDWQPPPPPMPPP 110
Query: 73 GTNSASLLNGSMLQRALLLQQLQG--NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQA 130
+ S + +L Q G L + SP + P PP P Q + P
Sbjct: 111 PGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPP--VPPGSYMPPSQSYMPPP 168
Query: 131 TRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEG 190
PP P P ++P Q+ + + + + SSSQ+ +S P
Sbjct: 169 QPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSS 228
Query: 191 SEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEP- 249
+ P + Q L P P +T + EP E+ AK + ++ EP
Sbjct: 229 QASPSRPSQGHSKSQLLAPPPPSAPPGNKTTV-QQEPLESG---AKNKSTEQQQAAPEPD 284
Query: 250 PGQLQVKAQPQ---ARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQ--- 303
P + + Q Q + + Q +T LP + V+ + P ++ + V + +Q
Sbjct: 285 PSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATSQVPE 344
Query: 304 ------PRIPSTDTQVQPKL-QKQAQTQTSPEHLVLQQKQV-----QPQLQQEAEPQKQV 351
P +P + +V P L ++ Q++ E L+Q Q Q Q Q Q
Sbjct: 345 SPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLKQLQAAAAHWQQHQQHRVGFQYQG 404
Query: 352 QPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQ 388
Q HTQ Q +Q Q +QPP PH Q
Sbjct: 405 IMQKHTQLQQILQQY-----QQIIQPP------PHIQ 430
Score = 44.7 bits (104), Expect = 4e-04
Identities = 77/296 (26%), Positives = 102/296 (34%), Gaps = 36/296 (12%)
Query: 5 QQQQQLQQQQQQLQQLQQ-----------QQLQQQQLQQQQLLQLQQLLQQSPPQAPLPM 53
Q+ QLQQ QQ QQ+ Q QL+ ++QQQ Q Q L Q+ + L
Sbjct: 407 QKHTQLQQILQQYQQIIQPPPHIQTMSVDMQLRHYEMQQQ---QFQHLYQEWEREFQLWE 463
Query: 54 AVSRGLPP----QQPQQPLLNLQGTNSA--SLLNGSMLQRALLLQQLQGNLR------GY 101
P Q+ ++ QG A S L + + Q GN+ Y
Sbjct: 464 EQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKVNSFQNMKNQYMGNMSMPPPFVPY 523
Query: 102 GMASPGLAA--PSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQK 159
P L P + PP L P + P AT PPPV P P+ G P
Sbjct: 524 SQMPPPLPTMPPPVLPPSLPPPVMPPALP-ATVPPPGMPPPVMPPSLPTSVPPPGMPPSL 582
Query: 160 QARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKR 219
+ P SS+ PV PP S A P M P P P I
Sbjct: 583 SSAGPPPVLPPPSLSSAGPPPV---LPPPSLSSTAPPPVMPLPPLSSATP-PPGIPPPGV 638
Query: 220 TPAPEPEPCEASELPAKRLRSSEEPTEKEP---PGQLQVKAQPQARMTVPKQTQTP 272
P+ A PA +SS+ P + P P + + P P Q+ P
Sbjct: 639 PQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGP 694
Score = 35.4 bits (80), Expect = 0.22
Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
Query: 259 PQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQ 318
P ++M P T P +LP +L V+P P + P +P T V P
Sbjct: 522 PYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLP---TSVPPPGM 578
Query: 319 KQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPP 378
+ + P ++ P L P P + + A P V P PP + PP
Sbjct: 579 PPSLSSAGPPPVL-----PPPSLSSAGPPPVLPPPSLSSTAPPPVMPL--PPLSSATPPP 631
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 67.0 bits (162), Expect = 7e-11
Identities = 85/324 (26%), Positives = 123/324 (37%), Gaps = 45/324 (13%)
Query: 106 PGLAAPSL---TPPQLAT----PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQ 158
PGL +PSL TP A PNL P T S G P G+P PS +LS P
Sbjct: 3127 PGLNSPSLPGFTPSNTALTSPKPNLMGL-PSTTVPSP-GLPTSGLPNKPSSASLSSPTPA 3184
Query: 159 KQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK 218
+ P ++ Q P + PP ++ P++ + Q + KEK
Sbjct: 3185 QATMAMGPQQPPQQQQQQQ-QPQVQQPPPPPAAQPPPTPQLPLQQQQQRKDKDSEKVKEK 3243
Query: 219 RT---------PAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQT 269
P P+ E EA A + S+ PT + Q++A A + P
Sbjct: 3244 EKAHKGKGEPLPVPKKEKGEAPTATAATI-SAPLPTMEYAVDPAQLQALQAALTSDPTAL 3302
Query: 270 QTPDLLPEALEAQVLPRFQPRVL-QVQAQVQS-------------QTQPRIPSTDTQVQP 315
T LP +P F P Q+ +QS P + + P
Sbjct: 3303 LTSQFLP-----YFVPGFSPYYAPQIPGALQSGYLQPMYGMEGLFPYSPALSQALMGLSP 3357
Query: 316 K--LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 373
LQ+ Q Q S + + QQ+Q Q Q QQ+ + Q+Q T P + PA+
Sbjct: 3358 GSLLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAKE 3417
Query: 374 SVQPPEQTHEQPHTQPQVSLLAPE 397
S +P EQ +T +VS L P+
Sbjct: 3418 SPKP----EEQKNTPREVSPLLPK 3437
Score = 55.5 bits (132), Expect = 2e-07
Identities = 107/436 (24%), Positives = 152/436 (34%), Gaps = 60/436 (13%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQ-------------QQQLQQQQLLQLQQLLQQSPP 47
M + +QQQQ QQQQQQ QQ QQQQ Q QQ+LQQQ L QL +P
Sbjct: 1718 MIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALIQSQLF--NPT 1775
Query: 48 QAP-LPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASP 106
P PM L QQ Q L ++ LN + +L + L G G P
Sbjct: 1776 LLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEV---SLPVTSGALTLTGTG---P 1829
Query: 107 GLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSS 166
GL Q+ + QQ PQ + L + PSQ +P+K+ +
Sbjct: 1830 GLLEDLKAQVQVPQQSHQQILPQQQQNQLSIAQSHSALLQPSQ------HPEKK----NK 1879
Query: 167 TTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPE 226
K+ SQ + D EG E P+ + LP + K++ P E
Sbjct: 1880 LVIKEKEKESQR-----ERDSAEGGEGNTGPK------ETLPDALKAKEKKELAPGGGSE 1928
Query: 227 PCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP--EALEAQVL 284
P A R + E G V + + V K+ D E LE
Sbjct: 1929 PSMLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTDQGENLEKLECDSC 1988
Query: 285 PRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQE 344
+ +L +++ + Q P + K + + P ++PQ +
Sbjct: 1989 GKLFSNILILKSHQEHVHQNYFPFKQLERFAKQYRDHYDKLYP---------LRPQTPEP 2039
Query: 345 AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP---PEQTHEQPHTQPQVSLLAPEQTPV 401
P P A P QP P S P P QP + P L P + P+
Sbjct: 2040 PPPPPPPPPPPLPAAPP--QPASTPAIPASAPPITSPTIAPAQP-SVPLTQLSMPMELPI 2096
Query: 402 VVHVCGLEMPPDAVEA 417
+ MP + A
Sbjct: 2097 FSPLMMQTMPLQTLPA 2112
Score = 49.7 bits (117), Expect = 1e-05
Identities = 74/235 (31%), Positives = 99/235 (42%), Gaps = 46/235 (19%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQ--QQQLLQLQQL--LQQSPPQAP---LPMAV 55
S Q Q ++Q Q +LQQQ+ +Q+ QQ+L QL L L Q PPQAP P+
Sbjct: 2437 SAQPNQTQEKQGQPKPELQQQEQPEQKTNTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQ 2496
Query: 56 SRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTP 115
S P Q PL L + L N L L Y LA PS
Sbjct: 2497 SSPSPSQLSHLPLKPLHTSTPQQLAN------------LPPQLIPYQCDQCKLAFPSFEH 2544
Query: 116 PQ-------LATPNLQQFFPQATRQSLLGPPPVGVPMNP---SQFNLSGRNPQKQARTSS 165
Q L+ N Q PQ +SL P + P NP SQ LSG PQ A SS
Sbjct: 2545 WQEHQQLHFLSAQN-QFIHPQFLDRSLDMPFMLFDPSNPLLASQL-LSGAIPQIPA--SS 2600
Query: 166 STTPNRKDSSSQTM--PVEDKSDPPEGSEEAA----EPRMD-------TPEDQDL 207
+T+P+ S+ T+ +E+K+ G ++ EP+ D TPE ++
Sbjct: 2601 ATSPSTPTSTMNTLKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEI 2655
Score = 47.4 bits (111), Expect = 5e-05
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 25/218 (11%)
Query: 515 CYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRR 574
C +C+ + + FQ H +H Q+ + H+ + + + + P
Sbjct: 986 CKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGN-----PVHL 1040
Query: 575 WCNTCQLY---------------YMGDLIQHRRTQDHK--IAKQSLRPFCTVCNRYFKTP 617
CN C Y + L ++ Q H+ + +S C +CN K
Sbjct: 1041 KCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQQHESGVEGESCYYHCVLCNYSTKAK 1100
Query: 618 RKFVEHVKSQGHK--DKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEE-EDDEDEE 674
++HV+S H+ + ++L+ L+K + +DED C D EE ED E
Sbjct: 1101 LNLIQHVRSMKHQRSESLRKLQRLQKGLPEEDEDLGQIFTIRRCPSTDPEEAIEDVEGPS 1160
Query: 675 EIEVEEELCKQVRSRDISREEWKGSETYSPNTAYGVDF 712
E + E + + S + + T SP T+ + F
Sbjct: 1161 ETAADPEELAKDQEGGASSSQAEKELTDSPATSKRISF 1198
Score = 43.1 bits (100), Expect = 0.001
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLP 52
QQ QQ Q Q+ +QQ QQ+QLQQQQ Q+ Q Q + PP AP P
Sbjct: 3362 QQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSP 3410
Score = 40.4 bits (93), Expect = 0.007
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 10 LQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
L QQ QQ QQ Q+ +QQQQ +Q Q Q Q++ QQ P + P+ P + P
Sbjct: 3360 LLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDP 3414
Score = 39.7 bits (91), Expect = 0.011
Identities = 80/367 (21%), Positives = 137/367 (37%), Gaps = 58/367 (15%)
Query: 292 LQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ--- 348
LQ+ A+ + + +PKL + Q P +Q Q +P+LQQ+ +P+
Sbjct: 2407 LQLTAEAEELATFNSKTEAGDEKPKLAEAPSAQ--PNQTQEKQGQPKPELQQQEQPEQKT 2464
Query: 349 ---KQVQPQVHT-----QAQPSVQPQEHPPAQVSVQPPEQTH-----EQPHTQPQVSLLA 395
+Q PQ+ + Q P P + P Q S P + +H T Q++ L
Sbjct: 2465 NTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPSQLSHLPLKPLHTSTPQQLANLP 2524
Query: 396 PEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRA 455
P+ P C L P E Q+ QN+ + +R+
Sbjct: 2525 PQLIPYQCDQCKLAFP--------SFEHWQEH---QQLHFLSAQNQ----FIHPQFLDRS 2569
Query: 456 REMP-GVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFF 514
+MP ++ L + L S + +P S + STP +T K+ L+
Sbjct: 2570 LDMPFMLFDPSNPLLASQLLSG--------AIPQIPASSATSPSTPTSTMNTLKRKLEE- 2620
Query: 515 CYICKASCS-SQQEFQDHMSEPQHQQRL------GEIQHMSQACLLSLLPVPRDVLETED 567
KAS S + + EPQ +RL +++ + Q LL P R +L+
Sbjct: 2621 ----KASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPT-RKMLDHIA 2675
Query: 568 EEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQ 627
E ++ Q+++ + R+ Q + C C FK H++S+
Sbjct: 2676 HEVGLKK--RVVQVWFQNTRARERKGQFRAVGPAQAHRRCPFCRALFKAKTALEAHIRSR 2733
Query: 628 GHKDKAK 634
H +AK
Sbjct: 2734 -HWHEAK 2739
Score = 37.4 bits (85), Expect = 0.057
Identities = 54/261 (20%), Positives = 91/261 (34%), Gaps = 33/261 (12%)
Query: 4 QQQQQQLQQQQQQLQQ----------------LQQQQLQQQQLQQQQLLQLQQLLQQSPP 47
Q QQQ QQQQ Q+QQ LQQQQ Q++ +++ + ++ +
Sbjct: 3194 QPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQ-QRKDKDSEKVKEKEKAHKGKGE 3252
Query: 48 QAPLP------------MAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQ-L 94
P+P +S LP + LQ +A + + L + L +
Sbjct: 3253 PLPVPKKEKGEAPTATAATISAPLPTMEYAVDPAQLQALQAALTSDPTALLTSQFLPYFV 3312
Query: 95 QGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSG 154
G Y PG P L + P A Q+L+G P + Q+ S
Sbjct: 3313 PGFSPYYAPQIPGALQSGYLQPMYGMEGLFPYSP-ALSQALMGLSPGSLLQQYQQYQQSL 3371
Query: 155 RNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDI 214
+ +Q + ++ Q PP +P ++P+ ++ P ++
Sbjct: 3372 QEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREV 3431
Query: 215 AK--EKRTPAPEPEPCEASEL 233
+ K PE E A L
Sbjct: 3432 SPLLPKLPEEPEAESKSADSL 3452
Score = 37.0 bits (84), Expect = 0.074
Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 31/202 (15%)
Query: 153 SGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLP--PC 210
+G K A S+ ++ Q P + + PE ++ P+ P+ LP P
Sbjct: 2425 AGDEKPKLAEAPSAQPNQTQEKQGQPKPELQQQEQPE--QKTNTPQQKLPQLVSLPSLPQ 2482
Query: 211 PEDIAKEKRTPAPE--PEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVP-- 266
P A + P P+ P P + S LP K L +S P QL Q ++ P
Sbjct: 2483 PPPQAPPPQCPLPQSSPSPSQLSHLPLKPLHTSTPQQLANLPPQLIPYQCDQCKLAFPSF 2542
Query: 267 ---------------KQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRI----- 306
Q P L +L+ + F P + +Q+ S P+I
Sbjct: 2543 EHWQEHQQLHFLSAQNQFIHPQFLDRSLDMPFM-LFDPSNPLLASQLLSGAIPQIPASSA 2601
Query: 307 --PSTDTQVQPKLQKQAQTQTS 326
PST T L+++ + + S
Sbjct: 2602 TSPSTPTSTMNTLKRKLEEKAS 2623
Score = 33.9 bits (76), Expect = 0.63
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 315 PKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQ 364
P K+A + + + +Q+Q Q Q QQ+ + Q+Q Q Q QAQ VQ
Sbjct: 1704 PSEPKEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQ 1753
Score = 33.5 bits (75), Expect = 0.82
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 661 EGDEEEEEDDEDEEEIEVEEELCKQVRSRDISRE 694
E + EEEE++E+EEE E E+E CK + ++ E
Sbjct: 469 EEEAEEEEEEEEEEEEEEEDEGCKGLFPSELDEE 502
Score = 32.0 bits (71), Expect = 2.4
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 294 VQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQP 353
+ A + S ++P+ + +Q Q Q QQ+Q Q Q QQ+A+ Q Q
Sbjct: 1697 IGANIASPSEPKEANRKKLADMIASRQQQQQQQ------QQQQQQQQQQQQAQTLAQAQA 1750
Query: 354 QVHTQAQPSVQPQ 366
QV Q +Q Q
Sbjct: 1751 QVQAHLQQELQQQ 1763
Score = 30.8 bits (68), Expect = 5.3
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 637 KSLEKEIAGQDEDHFITVDAVGCF---------EGDEEEEEDDEDEEEIEVEEE 681
KS E + +G E V CF E +EEEEE++ +EEE E EEE
Sbjct: 429 KSSEGKDSGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEEEAEEEEEEEEEE 482
Score = 30.4 bits (67), Expect = 6.9
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 661 EGDEEEEEDDEDEEEIEVEEE 681
E +EEEEE +E+EEE E EEE
Sbjct: 464 EEEEEEEEAEEEEEEEEEEEE 484
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 66.6 bits (161), Expect = 9e-11
Identities = 77/252 (30%), Positives = 107/252 (42%), Gaps = 45/252 (17%)
Query: 2 FSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
+ + ++QL QQQQQ QQ QQQQ QQQQ + Q PQ P G PP
Sbjct: 2151 YREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGP------GGYPP 2204
Query: 62 ----QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQ 117
QQ Q L LQG+ SM Q A + QL M PGL A S
Sbjct: 2205 AMQQQQRMQQHLPLQGS--------SMGQMAAQMGQLG------QMGQPGLGADS----- 2245
Query: 118 LATPNLQQFFPQATRQ-----SLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRK 172
TPN+QQ Q Q +G P PM+P Q LSG+ PQ +S P ++
Sbjct: 2246 --TPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQ-PQ------ASHLPGQQ 2296
Query: 173 DSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLP-PCPEDIAKEKRTPAPEPEPCEAS 231
++S + V + P + ++P +P + P P P ++ + +P P AS
Sbjct: 2297 IATSLSNQVRSPA-PVQSPRPQSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTMAS 2355
Query: 232 ELPAKRLRSSEE 243
+ L + E+
Sbjct: 2356 SIDQGHLGNPEQ 2367
Score = 60.8 bits (146), Expect = 5e-09
Identities = 88/353 (24%), Positives = 128/353 (36%), Gaps = 66/353 (18%)
Query: 85 LQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVP 144
LQ+A L+++ + + L +P+ PP TP Q PQ T Q P P V
Sbjct: 1821 LQQAQLMRRRMATMNTRNVPQQSLPSPTSAPP--GTPTQQPSTPQ-TPQPPAQPQPSPVS 1877
Query: 145 MNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPED 204
M+P+ F ART TT + +SQ + PP + EAA +
Sbjct: 1878 MSPAGF-------PSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQ 1930
Query: 205 QD----------LPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQ 254
Q +PP + TP + P + ++ P+ PPGQ Q
Sbjct: 1931 QQHLYRVNINNSMPPGRTGMG----TPGSQMAPVSLNVPRPNQVSGPVMPSM--PPGQWQ 1984
Query: 255 VKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDT--Q 312
PQ Q +P V+ +QAQ + PR+PS
Sbjct: 1985 QAPLPQQ--------------------QPMPGLPRPVISMQAQA-AVAGPRMPSVQPPRS 2023
Query: 313 VQPK-LQKQAQTQTSPEHLVLQQKQVQ-----PQLQQEAEPQKQVQPQVHTQAQPSVQPQ 366
+ P LQ +T SP QQ+ + PQL Q+ + + QP +QPQ
Sbjct: 2024 ISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAK---YVANQPGMQPQ 2080
Query: 367 EHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGG 419
+Q +QP H+QP Q ++ A P V PP GG
Sbjct: 2081 PGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGV--------PPQQQAMGG 2125
Score = 55.5 bits (132), Expect = 2e-07
Identities = 91/422 (21%), Positives = 147/422 (34%), Gaps = 64/422 (15%)
Query: 7 QQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQ 66
+ +L+QQQ Q +LQQ QL ++++ + Q SP AP + PQ PQ
Sbjct: 1809 KHKLRQQQIQ-HRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQP 1867
Query: 67 PLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQF 126
P Q S ++ + Q G + P PP A +Q
Sbjct: 1868 P---AQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQI 1924
Query: 127 FPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSD 186
+A +Q L + M P + + P Q S P S MP S
Sbjct: 1925 EREAQQQQHLYRVNINNSMPPGRTGMG--TPGSQMAPVSLNVPRPNQVSGPVMP----SM 1978
Query: 187 PPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK--------RTPAPEPEPCEASELPAKRL 238
PP ++A P+ Q +P P + + R P+ +P + L
Sbjct: 1979 PPGQWQQA-----PLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLL 2033
Query: 239 RSSEEPTEKEPPGQLQ--VKAQPQARMTVPKQ------TQTPDLLPE-------ALEAQV 283
R+ + P+ + Q+ +K+ PQ KQ P + P+ ++ Q
Sbjct: 2034 RTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQP 2093
Query: 284 LPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQ-------------TQTSPEHL 330
QP + + A +P +P Q L Q Q +P++
Sbjct: 2094 GMHQQPSLQNLNAMQAGVPRPGVP-PQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQYR 2152
Query: 331 VLQQKQVQPQLQQEAEPQKQVQPQV------------HTQAQPSVQPQEHPPAQVSVQPP 378
+ ++Q+ Q QQ+ + Q+Q Q Q H Q Q P +PPA Q
Sbjct: 2153 EMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRM 2212
Query: 379 EQ 380
+Q
Sbjct: 2213 QQ 2214
Score = 45.8 bits (107), Expect = 2e-04
Identities = 87/378 (23%), Positives = 133/378 (35%), Gaps = 70/378 (18%)
Query: 27 QQQLQQQQLLQL-QQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSML 85
Q++L++++ +L +Q + + P P P A +P QP +P NG +
Sbjct: 624 QKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP------------NGPLS 671
Query: 86 QRALLLQQLQGNLRGYGMASPGLAAPSLTP--PQLATPNLQQFFPQATRQSLLGPPPVGV 143
+Q QG + + S G P P+ A+P + + + +G P G+
Sbjct: 672 LPVNRMQVSQG-MNSFNPMSLGNVQLPQAPMGPRAASP-----MNHSVQMNSMGSVP-GM 724
Query: 144 PMNPSQF----NLSG---RNPQKQARTSSSTTP-NRKDSSSQTMPVEDKSDPPEGSEEAA 195
++PS+ N+ G N QA S P N+ SSS M V
Sbjct: 725 AISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSV-------------- 770
Query: 196 EPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC-----EASELPAKRLRSSEEPTEKEPP 250
PP +++ + A P P +AS+LP + S P PP
Sbjct: 771 --------GMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQS--PLHPTPP 820
Query: 251 GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPS-T 309
P + T P P + P A P + Q + T +PS T
Sbjct: 821 PASTAAGMPSLQHTTP-----PGMTPPQPAAPTQPSTP---VSSSGQTPTPTPGSVPSAT 872
Query: 310 DTQVQPKLQK--QAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQE 367
TQ P +Q QAQ P+ V PQ Q+ QP +Q +
Sbjct: 873 QTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDN 932
Query: 368 HPPAQVSVQPPEQTHEQP 385
P SV E +QP
Sbjct: 933 RVPTPSSVASAETNSQQP 950
Score = 45.8 bits (107), Expect = 2e-04
Identities = 76/354 (21%), Positives = 127/354 (35%), Gaps = 50/354 (14%)
Query: 20 LQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASL 79
+ Q Q Q L Q Q + Q P VS+G P LN+ G ++ L
Sbjct: 746 MAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQL 805
Query: 80 LNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPP 139
+ Q L + + P +TPPQ A P +T S G
Sbjct: 806 PCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPT-----QPSTPVSSSGQT 860
Query: 140 PVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRK----------DSSSQTMPVEDKSDPPE 189
P P + + P QA + TP + SSQ P + PP
Sbjct: 861 PTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPG 920
Query: 190 GSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEP 249
A +D + P P +A + T + +P P ++P +++ + + EP
Sbjct: 921 TPLSQAAASID-----NRVPTPSSVASAE-TNSQQPGP----DVPVLEMKTETQAEDTEP 970
Query: 250 -PGQLQVKAQPQARMT------VPKQTQTPDLLPEALEAQVLPRFQPRV-LQVQAQVQSQ 301
PG + K +P++ M + + D+ + E + +P V ++V+ + +S
Sbjct: 971 DPG--ESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESS 1028
Query: 302 TQPRIPSTDTQVQPKLQ-------KQAQTQT-------SPEHLVLQQKQVQPQL 341
+ + + QP+ + +QA T PE L +Q V PQL
Sbjct: 1029 SNGTASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLPFRQ-PVDPQL 1081
Score = 42.7 bits (99), Expect = 0.001
Identities = 62/240 (25%), Positives = 87/240 (36%), Gaps = 66/240 (27%)
Query: 6 QQQQLQQQQQQLQQLQQQQLQQQ-------------QLQQQQ-------LLQLQQLLQQS 45
++Q LQQQQQQ QQ QQQQ QQQ Q QQ Q +Q QQ +QQ
Sbjct: 2156 RRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQH 2215
Query: 46 PP---QAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYG 102
P + MA G Q Q L G +S + ++ QR L QQ++ + G
Sbjct: 2216 LPLQGSSMGQMAAQMGQLGQMGQPGL----GADSTPNIQQALQQRILQQQQMKQQIGSPG 2271
Query: 103 MASP------------------------GLAAPSLTPPQLATPNLQQFFPQATRQSLLGP 138
+P L+ +P + +P Q P ++ + P
Sbjct: 2272 QPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQP 2331
Query: 139 PP---------------VGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVED 183
P + V M S NP++ A TP+R SS+ V D
Sbjct: 2332 QPSPHHVSPQTGSPHPGLAVTMASSIDQGHLGNPEQSAMLPQLNTPSRSALSSELSLVGD 2391
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 66.6 bits (161), Expect = 9e-11
Identities = 77/252 (30%), Positives = 107/252 (42%), Gaps = 45/252 (17%)
Query: 2 FSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
+ + ++QL QQQQQ QQ QQQQ QQQQ + Q PQ P G PP
Sbjct: 2189 YREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGP------GGYPP 2242
Query: 62 ----QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQ 117
QQ Q L LQG+ SM Q A + QL M PGL A S
Sbjct: 2243 AMQQQQRMQQHLPLQGS--------SMGQMAAQMGQLG------QMGQPGLGADS----- 2283
Query: 118 LATPNLQQFFPQATRQ-----SLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRK 172
TPN+QQ Q Q +G P PM+P Q LSG+ PQ +S P ++
Sbjct: 2284 --TPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQ-PQ------ASHLPGQQ 2334
Query: 173 DSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLP-PCPEDIAKEKRTPAPEPEPCEAS 231
++S + V + P + ++P +P + P P P ++ + +P P AS
Sbjct: 2335 IATSLSNQVRSPA-PVQSPRPQSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTMAS 2393
Query: 232 ELPAKRLRSSEE 243
+ L + E+
Sbjct: 2394 SIDQGHLGNPEQ 2405
Score = 60.8 bits (146), Expect = 5e-09
Identities = 88/353 (24%), Positives = 128/353 (36%), Gaps = 66/353 (18%)
Query: 85 LQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVP 144
LQ+A L+++ + + L +P+ PP TP Q PQ T Q P P V
Sbjct: 1859 LQQAQLMRRRMATMNTRNVPQQSLPSPTSAPP--GTPTQQPSTPQ-TPQPPAQPQPSPVS 1915
Query: 145 MNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPED 204
M+P+ F ART TT + +SQ + PP + EAA +
Sbjct: 1916 MSPAGF-------PSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQ 1968
Query: 205 QD----------LPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQ 254
Q +PP + TP + P + ++ P+ PPGQ Q
Sbjct: 1969 QQHLYRVNINNSMPPGRTGMG----TPGSQMAPVSLNVPRPNQVSGPVMPSM--PPGQWQ 2022
Query: 255 VKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDT--Q 312
PQ Q +P V+ +QAQ + PR+PS
Sbjct: 2023 QAPLPQQ--------------------QPMPGLPRPVISMQAQA-AVAGPRMPSVQPPRS 2061
Query: 313 VQPK-LQKQAQTQTSPEHLVLQQKQVQ-----PQLQQEAEPQKQVQPQVHTQAQPSVQPQ 366
+ P LQ +T SP QQ+ + PQL Q+ + + QP +QPQ
Sbjct: 2062 ISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAK---YVANQPGMQPQ 2118
Query: 367 EHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGG 419
+Q +QP H+QP Q ++ A P V PP GG
Sbjct: 2119 PGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGV--------PPQQQAMGG 2163
Score = 55.5 bits (132), Expect = 2e-07
Identities = 91/422 (21%), Positives = 147/422 (34%), Gaps = 64/422 (15%)
Query: 7 QQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQ 66
+ +L+QQQ Q +LQQ QL ++++ + Q SP AP + PQ PQ
Sbjct: 1847 KHKLRQQQIQ-HRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQP 1905
Query: 67 PLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQF 126
P Q S ++ + Q G + P PP A +Q
Sbjct: 1906 P---AQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQI 1962
Query: 127 FPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSD 186
+A +Q L + M P + + P Q S P S MP S
Sbjct: 1963 EREAQQQQHLYRVNINNSMPPGRTGMG--TPGSQMAPVSLNVPRPNQVSGPVMP----SM 2016
Query: 187 PPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK--------RTPAPEPEPCEASELPAKRL 238
PP ++A P+ Q +P P + + R P+ +P + L
Sbjct: 2017 PPGQWQQA-----PLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLL 2071
Query: 239 RSSEEPTEKEPPGQLQ--VKAQPQARMTVPKQ------TQTPDLLPE-------ALEAQV 283
R+ + P+ + Q+ +K+ PQ KQ P + P+ ++ Q
Sbjct: 2072 RTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQP 2131
Query: 284 LPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQ-------------TQTSPEHL 330
QP + + A +P +P Q L Q Q +P++
Sbjct: 2132 GMHQQPSLQNLNAMQAGVPRPGVP-PQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQYR 2190
Query: 331 VLQQKQVQPQLQQEAEPQKQVQPQV------------HTQAQPSVQPQEHPPAQVSVQPP 378
+ ++Q+ Q QQ+ + Q+Q Q Q H Q Q P +PPA Q
Sbjct: 2191 EMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRM 2250
Query: 379 EQ 380
+Q
Sbjct: 2251 QQ 2252
Score = 45.8 bits (107), Expect = 2e-04
Identities = 87/378 (23%), Positives = 133/378 (35%), Gaps = 70/378 (18%)
Query: 27 QQQLQQQQLLQL-QQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSML 85
Q++L++++ +L +Q + + P P P A +P QP +P NG +
Sbjct: 662 QKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP------------NGPLS 709
Query: 86 QRALLLQQLQGNLRGYGMASPGLAAPSLTP--PQLATPNLQQFFPQATRQSLLGPPPVGV 143
+Q QG + + S G P P+ A+P + + + +G P G+
Sbjct: 710 LPVNRMQVSQG-MNSFNPMSLGNVQLPQAPMGPRAASP-----MNHSVQMNSMGSVP-GM 762
Query: 144 PMNPSQF----NLSG---RNPQKQARTSSSTTP-NRKDSSSQTMPVEDKSDPPEGSEEAA 195
++PS+ N+ G N QA S P N+ SSS M V
Sbjct: 763 AISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSV-------------- 808
Query: 196 EPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC-----EASELPAKRLRSSEEPTEKEPP 250
PP +++ + A P P +AS+LP + S P PP
Sbjct: 809 --------GMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQS--PLHPTPP 858
Query: 251 GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPS-T 309
P + T P P + P A P + Q + T +PS T
Sbjct: 859 PASTAAGMPSLQHTTP-----PGMTPPQPAAPTQPSTP---VSSSGQTPTPTPGSVPSAT 910
Query: 310 DTQVQPKLQK--QAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQE 367
TQ P +Q QAQ P+ V PQ Q+ QP +Q +
Sbjct: 911 QTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDN 970
Query: 368 HPPAQVSVQPPEQTHEQP 385
P SV E +QP
Sbjct: 971 RVPTPSSVASAETNSQQP 988
Score = 45.8 bits (107), Expect = 2e-04
Identities = 76/354 (21%), Positives = 127/354 (35%), Gaps = 50/354 (14%)
Query: 20 LQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASL 79
+ Q Q Q L Q Q + Q P VS+G P LN+ G ++ L
Sbjct: 784 MAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQL 843
Query: 80 LNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPP 139
+ Q L + + P +TPPQ A P +T S G
Sbjct: 844 PCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPT-----QPSTPVSSSGQT 898
Query: 140 PVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRK----------DSSSQTMPVEDKSDPPE 189
P P + + P QA + TP + SSQ P + PP
Sbjct: 899 PTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPG 958
Query: 190 GSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEP 249
A +D + P P +A + T + +P P ++P +++ + + EP
Sbjct: 959 TPLSQAAASID-----NRVPTPSSVASAE-TNSQQPGP----DVPVLEMKTETQAEDTEP 1008
Query: 250 -PGQLQVKAQPQARMT------VPKQTQTPDLLPEALEAQVLPRFQPRV-LQVQAQVQSQ 301
PG + K +P++ M + + D+ + E + +P V ++V+ + +S
Sbjct: 1009 DPG--ESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESS 1066
Query: 302 TQPRIPSTDTQVQPKLQ-------KQAQTQT-------SPEHLVLQQKQVQPQL 341
+ + + QP+ + +QA T PE L +Q V PQL
Sbjct: 1067 SNGTASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLPFRQ-PVDPQL 1119
Score = 42.7 bits (99), Expect = 0.001
Identities = 62/240 (25%), Positives = 87/240 (36%), Gaps = 66/240 (27%)
Query: 6 QQQQLQQQQQQLQQLQQQQLQQQ-------------QLQQQQ-------LLQLQQLLQQS 45
++Q LQQQQQQ QQ QQQQ QQQ Q QQ Q +Q QQ +QQ
Sbjct: 2194 RRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQH 2253
Query: 46 PP---QAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYG 102
P + MA G Q Q L G +S + ++ QR L QQ++ + G
Sbjct: 2254 LPLQGSSMGQMAAQMGQLGQMGQPGL----GADSTPNIQQALQQRILQQQQMKQQIGSPG 2309
Query: 103 MASP------------------------GLAAPSLTPPQLATPNLQQFFPQATRQSLLGP 138
+P L+ +P + +P Q P ++ + P
Sbjct: 2310 QPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQP 2369
Query: 139 PP---------------VGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVED 183
P + V M S NP++ A TP+R SS+ V D
Sbjct: 2370 QPSPHHVSPQTGSPHPGLAVTMASSIDQGHLGNPEQSAMLPQLNTPSRSALSSELSLVGD 2429
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 65.9 bits (159), Expect = 1e-10
Identities = 56/131 (42%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ Q QA QQ
Sbjct: 152 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQA------KEQQQQQQ 205
Query: 64 PQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAA---PSLTPPQLAT 120
QQ L Q LL LQ+ L LQ +G PG AA SL L+
Sbjct: 206 QQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQ--RQGLISIPPGQAALPVQSLPQAGLSP 263
Query: 121 PNLQQFFPQAT 131
+QQ + + T
Sbjct: 264 AEIQQLWKEVT 274
Score = 63.2 bits (152), Expect = 1e-09
Identities = 55/134 (41%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 2 FSQQQQQQL-----QQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVS 56
F ++QQ+QL QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ Q P +
Sbjct: 138 FYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQA 197
Query: 57 RGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPP 116
+ QQ QQ L Q Q+ L +QQLQ + GL S+ P
Sbjct: 198 KEQQQQQQQQQQLAAQQL--------VFQQQLLQMQQLQQQQHLLSLQRQGLI--SIPPG 247
Query: 117 QLATPNLQQFFPQA 130
Q A P Q PQA
Sbjct: 248 QAALP--VQSLPQA 259
Score = 55.1 bits (131), Expect = 3e-07
Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 241 SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVL-PRFQPRVLQVQAQVQ 299
S + ++K+ P Q+ V A MT Q TP + + L+ QVL P+ +LQ Q V
Sbjct: 75 SPKSSDKQRPLQVPVSV---AMMT--PQVITPQQMQQILQQQVLSPQQLQALLQQQQAVM 129
Query: 300 SQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQA 359
Q Q Q+Q +KQ E L LQ Q Q Q QQ+ + Q+Q Q Q Q
Sbjct: 130 LQQQ--------QLQEFYKKQQ------EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 175
Query: 360 QPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQ 398
Q Q Q+ Q P +Q EQ Q Q LA +Q
Sbjct: 176 QQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 214
Score = 48.5 bits (114), Expect = 2e-05
Identities = 36/93 (38%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 5 QQQQQLQQQQQQLQQL---QQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
QQQQ + QQQQLQ+ QQ+QL Q LQQQQ Q QQ QQ Q +
Sbjct: 123 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 182
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQL 94
QQ QQ G + Q+ L QQL
Sbjct: 183 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 215
Score = 43.9 bits (102), Expect = 6e-04
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 254 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQV---QAQVQSQTQPRIPSTD 310
QV Q + + +Q +P L L+ Q Q + LQ + Q Q Q
Sbjct: 97 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQ 156
Query: 311 TQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPP 370
Q Q + Q+Q Q Q + QQ+Q Q Q QQ+ P KQ + Q Q Q +
Sbjct: 157 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLV 216
Query: 371 AQVSVQPPEQTHEQPH 386
Q + +Q +Q H
Sbjct: 217 FQQQLLQMQQLQQQQH 232
Score = 36.2 bits (82), Expect = 0.13
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 277 EALEA--QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQ 334
+AL+A Q+L + Q L+ Q ++P + + P++ Q Q + VL
Sbjct: 56 QALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQVLSP 115
Query: 335 KQVQPQLQQE----------AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQ 384
+Q+Q LQQ+ E K+ Q Q+H Q Q Q+ Q Q +Q +Q
Sbjct: 116 QQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 175
Query: 385 PHTQPQ 390
Q Q
Sbjct: 176 QQQQQQ 181
Score = 33.5 bits (75), Expect = 0.82
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 12 QQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAV--SRGLPPQQPQQPLL 69
QQQQ LQ +Q LQQ Q L + +Q P Q P+ +A+ + + PQQ QQ +L
Sbjct: 53 QQQQALQAARQLLLQQ---QTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQ-IL 108
Query: 70 NLQGTNSASLLNGSMLQRALLLQQLQ 95
Q + L Q+A++LQQ Q
Sbjct: 109 QQQVLSPQQLQALLQQQQAVMLQQQQ 134
Score = 32.0 bits (71), Expect = 2.4
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 20/168 (11%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQ QQ LQQQ QQLQ LQQQQ + LQQ Q + + L QQ
Sbjct: 102 QQMQQILQQQVLSPQQLQAL------LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 155
Query: 64 PQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNL 123
QQ Q Q+ QQ Q + G + QLA L
Sbjct: 156 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 215
Query: 124 --------------QQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNP 157
QQ RQ L+ PP + +G +P
Sbjct: 216 VFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSP 263
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 65.9 bits (159), Expect = 1e-10
Identities = 56/131 (42%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ Q QA QQ
Sbjct: 60 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQA------KEQQQQQQ 113
Query: 64 PQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAA---PSLTPPQLAT 120
QQ L Q LL LQ+ L LQ +G PG AA SL L+
Sbjct: 114 QQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQ--RQGLISIPPGQAALPVQSLPQAGLSP 171
Query: 121 PNLQQFFPQAT 131
+QQ + + T
Sbjct: 172 AEIQQLWKEVT 182
Score = 63.2 bits (152), Expect = 1e-09
Identities = 55/134 (41%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 2 FSQQQQQQL-----QQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVS 56
F ++QQ+QL QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ Q P +
Sbjct: 46 FYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQA 105
Query: 57 RGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPP 116
+ QQ QQ L Q Q+ L +QQLQ + GL S+ P
Sbjct: 106 KEQQQQQQQQQQLAAQQL--------VFQQQLLQMQQLQQQQHLLSLQRQGLI--SIPPG 155
Query: 117 QLATPNLQQFFPQA 130
Q A P Q PQA
Sbjct: 156 QAALP--VQSLPQA 167
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/132 (34%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 268 QTQTPDLLPEALEAQVL-PRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTS 326
Q TP + + L+ QVL P+ +LQ Q V Q Q Q+Q +KQ
Sbjct: 5 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQ--------QLQEFYKKQQ----- 51
Query: 327 PEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPH 386
E L LQ Q Q Q QQ+ + Q+Q Q Q Q Q Q Q+ Q P +Q EQ
Sbjct: 52 -EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQ 110
Query: 387 TQPQVSLLAPEQ 398
Q Q LA +Q
Sbjct: 111 QQQQQQQLAAQQ 122
Score = 48.5 bits (114), Expect = 2e-05
Identities = 36/93 (38%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 5 QQQQQLQQQQQQLQQL---QQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
QQQQ + QQQQLQ+ QQ+QL Q LQQQQ Q QQ QQ Q +
Sbjct: 31 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 90
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQL 94
QQ QQ G + Q+ L QQL
Sbjct: 91 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 123
Score = 46.6 bits (109), Expect = 9e-05
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 254 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQV 313
QV Q + + +Q +P L L+ Q Q + LQ + + Q ++ Q
Sbjct: 5 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQ---EFYKKQQEQLHLQLLQQ 61
Query: 314 QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 373
Q + Q+Q Q Q + QQ+Q Q Q QQ+ + Q+Q P + Q Q Q+ A
Sbjct: 62 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQ 121
Query: 374 SVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQV 433
+ +Q + Q Q LL+ ++ ++ +PP + LP
Sbjct: 122 QLVFQQQLLQMQQLQQQQHLLSLQRQGLI------SIPPG--------QAALP------- 160
Query: 434 SMEEIQNESACGLDVGECENRAREMPGVWG------AGGSLKVTILQSSDSRAFSTVPLT 487
+Q+ GL E + +E+ GV G L +T SS + + +T +
Sbjct: 161 ----VQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKAS 216
Query: 488 P 488
P
Sbjct: 217 P 217
Score = 38.9 bits (89), Expect = 0.019
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 23/188 (12%)
Query: 250 PGQLQVKAQPQARMTVPKQT-------QTPDLLPEALEAQVLPRFQPRVLQVQAQV-QSQ 301
P QLQ Q Q + + +Q Q L + L+ Q + Q + Q Q Q Q Q
Sbjct: 23 PQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQ 82
Query: 302 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP 361
Q Q Q + Q+Q Q Q P +Q+Q Q Q QQ A Q Q Q+ Q
Sbjct: 83 QQ-------QQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ- 134
Query: 362 SVQPQEH-----PPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVE 416
+Q Q+H +S+ PP Q + PQ L E + V G+ D
Sbjct: 135 -LQQQQHLLSLQRQGLISI-PPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGI 192
Query: 417 AGGGMEKT 424
GG++ T
Sbjct: 193 KHGGLDLT 200
Score = 32.0 bits (71), Expect = 2.4
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 20/168 (11%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQ QQ LQQQ QQLQ LQQQQ + LQQ Q + + L QQ
Sbjct: 10 QQMQQILQQQVLSPQQLQAL------LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 63
Query: 64 PQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNL 123
QQ Q Q+ QQ Q + G + QLA L
Sbjct: 64 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 123
Query: 124 --------------QQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNP 157
QQ RQ L+ PP + +G +P
Sbjct: 124 VFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSP 171
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 65.9 bits (159), Expect = 1e-10
Identities = 55/130 (42%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
QQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ P + QQ
Sbjct: 177 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGK-----QAKEQQQQQQQ 231
Query: 65 QQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAA---PSLTPPQLATP 121
QQ L Q LL LQ+ L LQ +G PG AA SL L+
Sbjct: 232 QQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQ--RQGLISIPPGQAALPVQSLPQAGLSPA 289
Query: 122 NLQQFFPQAT 131
+QQ + + T
Sbjct: 290 EIQQLWKEVT 299
Score = 63.2 bits (152), Expect = 1e-09
Identities = 55/134 (41%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 2 FSQQQQQQL-----QQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVS 56
F ++QQ+QL QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ Q P +
Sbjct: 163 FYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQA 222
Query: 57 RGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPP 116
+ QQ QQ L Q Q+ L +QQLQ + GL S+ P
Sbjct: 223 KEQQQQQQQQQQLAAQQL--------VFQQQLLQMQQLQQQQHLLSLQRQGLI--SIPPG 272
Query: 117 QLATPNLQQFFPQA 130
Q A P Q PQA
Sbjct: 273 QAALP--VQSLPQA 284
Score = 52.8 bits (125), Expect = 1e-06
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 257 AQPQARMTVPKQTQTPDLLPEALEAQVL-PRFQPRVLQVQAQVQSQTQPRIPSTDTQVQP 315
A P + + Q TP + + L+ QVL P+ +LQ Q V Q Q Q+Q
Sbjct: 111 AVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQ--------QLQE 162
Query: 316 KLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSV 375
+KQ E L LQ Q Q Q QQ+ + Q+Q Q Q Q Q Q Q+ Q
Sbjct: 163 FYKKQQ------EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 216
Query: 376 QPPEQTHEQPHTQPQVSLLAPEQ 398
P +Q EQ Q Q LA +Q
Sbjct: 217 HPGKQAKEQQQQQQQQQQLAAQQ 239
Score = 48.5 bits (114), Expect = 2e-05
Identities = 36/93 (38%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 5 QQQQQLQQQQQQLQQL---QQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
QQQQ + QQQQLQ+ QQ+QL Q LQQQQ Q QQ QQ Q +
Sbjct: 148 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 207
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQL 94
QQ QQ G + Q+ L QQL
Sbjct: 208 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 240
Score = 46.6 bits (109), Expect = 9e-05
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 254 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQV 313
QV Q + + +Q +P L L+ Q Q + LQ + + Q ++ Q
Sbjct: 122 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQ---EFYKKQQEQLHLQLLQQ 178
Query: 314 QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 373
Q + Q+Q Q Q + QQ+Q Q Q QQ+ + Q+Q P + Q Q Q+ A
Sbjct: 179 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQ 238
Query: 374 SVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQV 433
+ +Q + Q Q LL+ ++ ++ +PP + LP
Sbjct: 239 QLVFQQQLLQMQQLQQQQHLLSLQRQGLI------SIPPG--------QAALP------- 277
Query: 434 SMEEIQNESACGLDVGECENRAREMPGVWG------AGGSLKVTILQSSDSRAFSTVPLT 487
+Q+ GL E + +E+ GV G L +T SS + + +T +
Sbjct: 278 ----VQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKAS 333
Query: 488 P 488
P
Sbjct: 334 P 334
Score = 38.9 bits (89), Expect = 0.019
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 23/188 (12%)
Query: 250 PGQLQVKAQPQARMTVPKQT-------QTPDLLPEALEAQVLPRFQPRVLQVQAQV-QSQ 301
P QLQ Q Q + + +Q Q L + L+ Q + Q + Q Q Q Q Q
Sbjct: 140 PQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQ 199
Query: 302 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP 361
Q Q Q + Q+Q Q Q P +Q+Q Q Q QQ A Q Q Q+ Q
Sbjct: 200 QQ-------QQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ- 251
Query: 362 SVQPQEH-----PPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVE 416
+Q Q+H +S+ PP Q + PQ L E + V G+ D
Sbjct: 252 -LQQQQHLLSLQRQGLISI-PPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGI 309
Query: 417 AGGGMEKT 424
GG++ T
Sbjct: 310 KHGGLDLT 317
Score = 32.0 bits (71), Expect = 2.4
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 20/168 (11%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQ QQ LQQQ QQLQ LQQQQ + LQQ Q + + L QQ
Sbjct: 127 QQMQQILQQQVLSPQQLQAL------LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 180
Query: 64 PQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNL 123
QQ Q Q+ QQ Q + G + QLA L
Sbjct: 181 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQL 240
Query: 124 --------------QQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNP 157
QQ RQ L+ PP + +G +P
Sbjct: 241 VFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLSP 288
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 65.9 bits (159), Expect = 1e-10
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 258 QPQARMTVPKQTQTPDLLPEALEAQVLP-RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 316
Q Q++++ Q LP A + V P QP+ Q AQ Q QTQP+ P+ QP+
Sbjct: 2364 QRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPA-----QPE 2418
Query: 317 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ--KQVQPQVHTQAQPSVQPQEHPPAQVS 374
+Q Q + QT + QP Q ++PQ Q QPQ + Q Q V+ Q P+Q
Sbjct: 2419 VQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQS--PSQTR 2476
Query: 375 VQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMP 411
++P + P Q QV + P+ H L++P
Sbjct: 2477 IRPSTPSQLSPGQQSQVQTTTSQPIPIQPHT-SLQIP 2512
Score = 62.4 bits (150), Expect = 2e-09
Identities = 69/272 (25%), Positives = 104/272 (38%), Gaps = 38/272 (13%)
Query: 129 QATRQSLLGPPPVGVPMNPSQFNLSGRNP----QKQARTSSSTTPNRKDSSSQTMPVEDK 184
Q T Q L P V V P Q + P Q+ T +TT +++ T+
Sbjct: 2300 QTTGQLQLIPQGVTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTT-A 2358
Query: 185 SDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEP 244
+ E + P+M +D+ LPP P EA A+ +
Sbjct: 2359 AGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVG----------PAEAQPQTAQPSAQPQPQ 2408
Query: 245 TEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVL---QVQAQVQSQ 301
T+ + P Q +V+ QP+ V QT +P + +P+V Q Q+ VQ Q
Sbjct: 2409 TQPQSPAQPEVQTQPE----VQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQ 2464
Query: 302 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP 361
+ R+ S Q +++ +Q SP QQ QVQ Q Q Q+ +Q QP
Sbjct: 2465 SPVRVQSPS---QTRIRPSTPSQLSPG----QQSQVQTTTSQPIPIQPHTSLQIPSQGQP 2517
Query: 362 SVQPQ---------EHPPAQVSVQPPEQTHEQ 384
QPQ EH + S+ P E+ Q
Sbjct: 2518 QSQPQVVMKHNAVIEHLKQKKSMTPAEREENQ 2549
Score = 43.1 bits (100), Expect = 0.001
Identities = 40/143 (27%), Positives = 50/143 (34%), Gaps = 8/143 (5%)
Query: 251 GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTD 310
GQLQ+ Q + P Q L+ A+ + RF L A S T + +T
Sbjct: 2303 GQLQLIPQGVTVLPGPGQ----QLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTA 2358
Query: 311 T----QVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQ 366
Q Q KL Q Q Q V P Q Q QPQ TQ Q QP+
Sbjct: 2359 AGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPE 2418
Query: 367 EHPPAQVSVQPPEQTHEQPHTQP 389
+V Q +H QP
Sbjct: 2419 VQTQPEVQTQTTVSSHVPSEAQP 2441
Score = 32.7 bits (73), Expect = 1.4
Identities = 90/469 (19%), Positives = 153/469 (32%), Gaps = 62/469 (13%)
Query: 140 PVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRM 199
P+GVP P + PQ++ SS+ P R ++ QT PV ++ E E E R
Sbjct: 1970 PIGVPETPKETP----TPQRKGLRSSALRPKRPETPKQTGPVIIETWVAEEELELWEIRA 2025
Query: 200 DTPE-DQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQ 258
+++ E AK++ ++ P S+ P +K +
Sbjct: 2026 FAERVEKEKAQAVEQQAKKRLEQQKPTVIATSTTSPTSSTTSTISPAQKVMVAPISGSVT 2085
Query: 259 PQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQA-----QVQSQTQPRIPS----- 308
+M + + +P + F V Q Q+ QVQ + IPS
Sbjct: 2086 TGTKMVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSNSGVVQVQQKVLGIIPSSTGTS 2145
Query: 309 --TDTQVQPKL-------QKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQ--------- 350
T T QP+ T+ V+ Q++P + P +Q
Sbjct: 2146 QQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVITGPQIRPGMTVIRTPLQQSTLGKAIIR 2205
Query: 351 --VQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGL 408
V Q Q Q P +V P P Q SL + T +
Sbjct: 2206 TPVMVQPGAPQQVMTQIIRGQPVSTAVSAPNTVSSTP---GQKSLTSATSTSNI--QSSA 2260
Query: 409 EMPPDAVEAGGGMEKTLPEPV-------GTQVSMEEIQNESACGLDVGECENRAREMPGV 461
PP + G ++ T+ + G Q IQ + G G+ + + + +
Sbjct: 2261 SQPPRPQQ--GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQ---GQTTGQLQLIPQGVTVL 2315
Query: 462 WGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKAS 521
G G L + + + F PL + + ++T + T+ + + Q
Sbjct: 2316 PGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQ------SKL 2369
Query: 522 CSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEP 570
Q QD P +G + Q S P P +T+ + P
Sbjct: 2370 SPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQP----QTQPQSP 2414
Score = 31.6 bits (70), Expect = 3.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
Query: 629 HKDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEE 681
+ D E + E+++ ++E+ +GD EE +D ED+EE E+EE+
Sbjct: 126 YDDHESEEEEEEEDMVSEEEEEE---------DGDAEETQDSEDDEEDEMEED 169
Score = 30.0 bits (66), Expect = 9.0
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 208 PPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPK 267
P P A E+ PAP P P + P LRS + + Q + P+ R++ P+
Sbjct: 9 PKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPR 68
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 65.5 bits (158), Expect = 2e-10
Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 27/296 (9%)
Query: 138 PPPVGVPMNPSQFNLSGRNPQKQAR----TSSSTTPNRKDSSSQTMPVEDKSDPPEGSEE 193
PP V + Q L P+++AR +++ TP + + P+ ++ E S E
Sbjct: 414 PPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAE 473
Query: 194 -----AAEPRMD-TPEDQDLPPCPEDIAKEK----RTPAPEPEPCEASELPAKRLRSSEE 243
A EP D TP + P E A+E ++P E E + + L + E
Sbjct: 474 IQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEA 533
Query: 244 PTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQA------- 296
P ++ P ++ + P + Q+P ++E L P + A
Sbjct: 534 PADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAI 593
Query: 297 QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVH 356
Q+ + T+ +VQP ++A + P +VQP +EA + Q P
Sbjct: 594 QLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE 653
Query: 357 TQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPP 412
A+ P E PA+V P E+ +V L E+TP+ + + PP
Sbjct: 654 APAEVQPPPAEEAPAEVQPPPAEE------APAEVQSLPAEETPIEETLAAVHSPP 703
Score = 48.9 bits (115), Expect = 2e-05
Identities = 70/325 (21%), Positives = 119/325 (36%), Gaps = 58/325 (17%)
Query: 172 KDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDL-----PPCPEDIAKEK-------- 218
+ S+Q P+E + P EG+ E A +++ P ++ P PE+ +E+
Sbjct: 385 RSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLST 444
Query: 219 --RTPA---------PEPEPCEASELPAK-RLRSSEEPTEKEPPGQLQ---------VKA 257
TPA P P+ A E A+ +L ++ EP E P + + +A
Sbjct: 445 AMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEA 504
Query: 258 QPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTD--TQVQP 315
+ + + ++T + + E Q+L + + A+ QS + + +VQ
Sbjct: 505 HAEVQSPLAEETTAEE---ASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQS 561
Query: 316 KLQKQAQTQTSPEHLVLQQKQVQPQLQQEA---------------EPQKQVQPQVHTQAQ 360
K + +P L LQ + +EA E +VQP +A
Sbjct: 562 PSAKGVSIEEAP--LELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAP 619
Query: 361 PSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPE--QTPVVVHVCGLEMPPDAVEAG 418
VQP A VQPP QP + AP Q P PP A EA
Sbjct: 620 AEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAP 679
Query: 419 GGMEKTLPEPVGTQVSMEEIQNESA 443
++ E + ++ + + A
Sbjct: 680 AEVQSLPAEETPIEETLAAVHSPPA 704
Score = 46.6 bits (109), Expect = 9e-05
Identities = 47/209 (22%), Positives = 73/209 (34%), Gaps = 24/209 (11%)
Query: 168 TPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRM--------------DTPEDQDLPPCPED 213
+P+ K S + P+E PP G E AE + P + PP E+
Sbjct: 561 SPSAKGVSIEEAPLE--LQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPA-EE 617
Query: 214 IAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPG--QLQVKAQPQARMTVPKQTQT 271
E + P E P E PA+ E P E +PP + + QP P + Q
Sbjct: 618 APAEVQPPPAEEAPAEVQPPPAE-----EAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQP 672
Query: 272 PDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLV 331
P E Q LP + + + A V S +P+ + V T +
Sbjct: 673 PPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEFPIG 732
Query: 332 LQQKQVQPQLQQEAEPQKQVQPQVHTQAQ 360
+V P ++ + + V T+ Q
Sbjct: 733 EASAEVSPPPSEQTPEDEALVENVSTEFQ 761
Score = 45.4 bits (106), Expect = 2e-04
Identities = 91/450 (20%), Positives = 160/450 (35%), Gaps = 102/450 (22%)
Query: 153 SGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPP-----------------EGS--EE 193
+ +P+ Q T+S+ +K+ S + E K PP EGS ++
Sbjct: 192 ASEHPEFQPATNSNEEIGQKNISRTSFTQETKKGPPVLLEDELREEVTVPVVQEGSAVKK 251
Query: 194 AAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASEL-------------------- 233
A ++ P + P + E+ T EP P E + +
Sbjct: 252 VASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAE 311
Query: 234 --------PAKRLRSSEEPTEKEPPG-------QLQVKAQPQARMTVPKQTQTPDLLPEA 278
PA+ E P E +PP +L + P + P + ++LP
Sbjct: 312 NSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPP 371
Query: 279 LE----AQVL-----PRFQPRVLQVQ------------AQVQSQTQPRIPSTDTQVQPKL 317
E ++L P Q ++VQ A+V+ P + T VQP L
Sbjct: 372 AEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVE---PPTVEETLADVQPLL 428
Query: 318 QKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQ---------PQEH 368
++A + + E L L P + E Q + P+ T + S + P +
Sbjct: 429 PEEAPREEARE-LQLSTAMETPAEEAPTEFQSPL-PKETTAEEASAEIQLLAATEPPADE 486
Query: 369 PPAQVSVQPPEQTH-EQPHTQPQVSL----LAPEQTPVVVHVCGLEMPPDAVEAGGGMEK 423
PA+ E+T E+ H + Q L A E + + + +E P D E +
Sbjct: 487 TPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPAD--ETPAEAQS 544
Query: 424 TLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG--VWGAGGSLKVTILQSSDSRAF 481
L E + + E+Q+ SA G+ + E + G S + +L ++++ A
Sbjct: 545 PLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASA- 603
Query: 482 STVPLTPVPRPSDSVSS---TPAATSTPSK 508
P P P++ + P A P++
Sbjct: 604 EEAPAEVQPPPAEEAPAEVQPPPAEEAPAE 633
Score = 42.0 bits (97), Expect = 0.002
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 206 DLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTV 265
++PP E + KE++T E E S + +S E+ + + G++ P+ +
Sbjct: 144 NIPPV-EKVDKEQQTYFSESEIVVISRPDSSSTKSKEDALKHKSSGKIFASEHPEFQ--- 199
Query: 266 PKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQT 325
P ++ + + + + V + + + + +P Q ++K A +
Sbjct: 200 PATNSNEEIGQKNISRTSFTQETKKGPPVLLEDELREEVTVPVV--QEGSAVKKVASAEI 257
Query: 326 SPEHLVLQQKQVQPQLQQEAEPQKQVQP--QVHTQAQPSVQPQEHPPAQ---------VS 374
P ++QP L +EA + + +P + H Q QPS +E P A+ V
Sbjct: 258 EPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPST--EETPDAEAATAVAENSVK 315
Query: 375 VQPPEQTHEQPHTQPQVSLLAP--EQTPVVVHVCGLEMPPDAVEAGG--GMEKTLPEPVG 430
VQPP E P + + P E++P V + + +PP A E+ + LP P
Sbjct: 316 VQPP-PAEEAPLVEFPAEIQPPSAEESPSVELLAEI-LPPSAEESPSEEPPAEILPPPAE 373
Query: 431 TQVSME---EIQNESA 443
S+E EI++ SA
Sbjct: 374 KSPSVELLGEIRSPSA 389
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 63.9 bits (154), Expect = 6e-10
Identities = 86/345 (24%), Positives = 127/345 (36%), Gaps = 41/345 (11%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
M QQQ Q Q Q+QQ Q QQ+QLQ QQ Q+QQ+LQ Q+ LQQ + L L
Sbjct: 153 MHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQ 212
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLAT 120
QQ Q LQ Q+ LLL Q QG L+ + QL
Sbjct: 213 QQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQ--------QQAQLQQ 264
Query: 121 PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMP 180
L+Q Q +Q LL Q+Q + + +
Sbjct: 265 QLLEQQQAQLQQQLLL---------------------QQQEQLQQQQQQQLLQQQQEQLQ 303
Query: 181 VEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRS 240
+ PP EE E+ +L P D+ E+ E EL ++ +
Sbjct: 304 QQQLQPPPLEPEE--------EEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQR 355
Query: 241 SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQS 300
+ +E QL+ + + Q + ++ Q +L P L AQ Q + VQ ++Q
Sbjct: 356 QLQLKLQEELQQLEQQLEQQQQQLEQQEVQL-ELTPVELGAQ-QQEVQLELTPVQPELQL 413
Query: 301 QTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEA 345
+ P V A P ++V+Q+ V P + A
Sbjct: 414 ELVPAAGGGGAAVPG--APAAVVVAPPGYVVVQELMVLPAVAAPA 456
Score = 63.5 bits (153), Expect = 7e-10
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 25/256 (9%)
Query: 147 PSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQD 206
P LSG + +++ P ++SS Q V S P SE A E R P ++
Sbjct: 37 PGPDTLSGGSGGSESQEEEE--PQERNSSPQRPAV---SAPVGASEIAEETR---PGQRE 88
Query: 207 LPPCPEDIAKEKRTPAPEPEPC-EASELPAKRLRSSEEPTEKEPPGQLQV-KAQPQARMT 264
L + + ++ P P+ +P E + P L ++P + GQ Q+ + Q + +
Sbjct: 89 L-----QLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQD---GQQQLSQLQQEKHQS 140
Query: 265 VPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQ 324
V Q P+L + Q+ QP+ +Q Q ++Q Q Q ++ + Q Q LQ+Q Q Q
Sbjct: 141 VHHQELKPELQLMHQQQQL----QPQQVQEQQRLQQQ-QEQLQTQQAQEQQVLQQQEQLQ 195
Query: 325 TS-PEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEH-PPAQVSVQPPEQTH 382
E +LQQ+Q Q Q QQ + Q+Q+Q Q Q Q +Q Q+ Q Q +Q
Sbjct: 196 QQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLL 255
Query: 383 EQPHTQPQVSLLAPEQ 398
+Q Q Q LL +Q
Sbjct: 256 QQQQAQLQQQLLEQQQ 271
Score = 57.0 bits (136), Expect = 7e-08
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 211 PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQL--QVKAQPQARMTVPKQ 268
P+ + +++R + + + L+ E+ ++ QL Q + Q Q + + +Q
Sbjct: 161 PQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQ 220
Query: 269 TQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPE 328
Q + + Q+ + Q +LQ Q Q+Q Q + Q+Q +L +Q Q Q +
Sbjct: 221 EQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQL---LQQQQAQLQQQLLEQQQAQLQQQ 277
Query: 329 HLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQ 388
L+ QQ+Q+Q Q QQ+ Q+Q Q Q P ++P+E ++ + P + EQ Q
Sbjct: 278 LLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQ 337
Query: 389 PQVSL 393
+ L
Sbjct: 338 QRQEL 342
Score = 53.9 bits (128), Expect = 6e-07
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 10/261 (3%)
Query: 147 PSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQ- 205
P + N S + P A +S + + ++ PE ++ ++ P+
Sbjct: 57 PQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHL 116
Query: 206 DLPPCPEDIAKEKRTPAPEPEPCEASELPAK-RLRSSEEPTEKEPPG-QLQVKAQPQARM 263
+L P+ +++ + + + K L+ + + +P Q Q + Q Q
Sbjct: 117 ELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQ 176
Query: 264 TVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQT 323
+Q Q +L + + Q + Q + Q Q Q+Q Q Q Q Q Q+Q Q
Sbjct: 177 LQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQ-QLLQQQEQLQQQQFQQQQEQL 235
Query: 324 QTSPEHLVLQQK-QVQPQL--QQEAEPQKQV--QPQVHTQAQPSVQPQEHPPAQVSVQPP 378
Q + L+LQQ+ Q+Q QL QQ+A+ Q+Q+ Q Q Q Q +Q QE Q Q
Sbjct: 236 QQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLL 295
Query: 379 EQTHEQ-PHTQPQVSLLAPEQ 398
+Q EQ Q Q L PE+
Sbjct: 296 QQQQEQLQQQQLQPPPLEPEE 316
Score = 50.8 bits (120), Expect = 5e-06
Identities = 110/434 (25%), Positives = 157/434 (36%), Gaps = 94/434 (21%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQ----LQQQQLQ--QQQLLQLQQLLQQS------PPQAPL 51
Q +QQ QQQ Q +QLQQ Q LQQQ Q QQQL QLQQ QS P+ L
Sbjct: 93 QLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPELQL 152
Query: 52 --------PMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRAL----LLQQLQGNLR 99
P V QQ Q+ L Q L LQ+ + LLQQ Q L+
Sbjct: 153 MHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQ 212
Query: 100 GYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGR-NPQ 158
+ QL QQ Q +Q L + Q L + Q
Sbjct: 213 QQQLLQ--------QQEQLQQQQFQQQQEQLQQQQQL-------LLLQQQGQLQQQLLQQ 257
Query: 159 KQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK 218
+QA+ ++ Q + ++ + E + Q L E + +++
Sbjct: 258 QQAQLQQQLLEQQQAQLQQQLLLQQQ-----------EQLQQQQQQQLLQQQQEQLQQQQ 306
Query: 219 RTPAP-EPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPE 277
P P EPE E EL L + +E+E Q Q
Sbjct: 307 LQPPPLEPEEEEEVEL---ELMPVDLGSEQELEQQRQ----------------------- 340
Query: 278 ALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQV 337
LE Q Q Q+Q ++Q + Q + Q Q Q++ Q + +P L QQ++V
Sbjct: 341 ELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQEV 400
Query: 338 QPQLQQEAEPQKQVQPQVHTQAQPSV----QPQEHPPAQVSVQPPEQTHEQPHTQPQVSL 393
Q +L VQP++ + P+ PA V V PP Q ++ +
Sbjct: 401 QLEL-------TPVQPELQLELVPAAGGGGAAVPGAPAAVVVAPPGYVVVQ-----ELMV 448
Query: 394 LAPEQTPVVVHVCG 407
L P VV + G
Sbjct: 449 LPAVAAPAVVAIPG 462
Score = 46.2 bits (108), Expect = 1e-04
Identities = 82/412 (19%), Positives = 153/412 (37%), Gaps = 93/412 (22%)
Query: 12 QQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNL 71
Q++ QLQQL+QQ QQQ Q +QL Q P P + P Q QQ L L
Sbjct: 86 QRELQLQQLEQQPEPQQQPQHEQL------------QQPQPHLELQQQPQQDGQQQLSQL 133
Query: 72 QGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQAT 131
Q S+ + Q+L+ P+L + QQ
Sbjct: 134 QQEKHQSVHH----------QELK--------------------PELQLMHQQQ------ 157
Query: 132 RQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGS 191
+ P Q R Q+Q + + ++ Q + +++
Sbjct: 158 ------------QLQPQQVQEQQRLQQQQEQLQT-----QQAQEQQVLQQQEQLQQQVQE 200
Query: 192 EEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPG 251
++ + + + + Q L E + +++ E +L+ ++ + G
Sbjct: 201 QQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQE------------QLQQQQQLLLLQQQG 248
Query: 252 QLQVK------AQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPR 305
QLQ + AQ Q ++ +Q Q L + Q+ + Q ++LQ Q + Q Q +
Sbjct: 249 QLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQ 308
Query: 306 IPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAE---PQKQVQ-------PQV 355
P + + + +++ + L+Q++ + + QQE E Q+Q+Q Q+
Sbjct: 309 PPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQL 368
Query: 356 HTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCG 407
Q + Q E Q+ + P E +Q Q +++ + PE +V G
Sbjct: 369 EQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAG 420
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 63.9 bits (154), Expect = 6e-10
Identities = 74/260 (28%), Positives = 94/260 (36%), Gaps = 33/260 (12%)
Query: 137 GPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAE 196
GPPP+ P P F + R P R P D + MP PP G
Sbjct: 42 GPPPLMRP--PPPFGMM-RGPPPPPRPPFGRPPF--DPNMPPMPPPGGIPPPMGPPHLQR 96
Query: 197 PRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVK 256
P P +PP P + P P A PA K P G++
Sbjct: 97 PPFMPPPMSSMPPPPGMMFP------PGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYY 150
Query: 257 AQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 316
AR T+ PD + ++++ P +L QAQVQ+Q Q + Q Q +
Sbjct: 151 ---NARTRESAWTK-PDGVKVIQQSELTP-----MLAAQAQVQAQAQAQ-----AQAQAQ 196
Query: 317 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQ 376
Q QAQ Q Q Q Q Q Q +A+ Q Q Q Q QAQ Q Q Q VQ
Sbjct: 197 AQAQAQAQA--------QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQ 248
Query: 377 PPEQTHEQPHTQPQVSLLAP 396
Q + P S AP
Sbjct: 249 AQVQAQAVGASTPTTSSPAP 268
Score = 55.1 bits (131), Expect = 3e-07
Identities = 87/420 (20%), Positives = 140/420 (33%), Gaps = 41/420 (9%)
Query: 26 QQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP-QQPQQPLLNLQGTNSASLLNGSM 84
+ ++ +L QQ + AP P AV RG PP +P P ++G
Sbjct: 10 ESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPP------ 63
Query: 85 LQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQ--FFPQATRQSLLGPPPVG 142
+ + P + P PP + P+LQ+ F P PPP G
Sbjct: 64 --------RPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSM---PPPPG 112
Query: 143 VPMNPSQFNLSGRN----PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPR 198
+ P ++ P + + TP+ K E P+G + +
Sbjct: 113 MMFPPGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSE 172
Query: 199 MDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQ 258
+ TP + + A +A + A+ ++ + + Q Q +AQ
Sbjct: 173 L-TPMLAAQAQVQAQAQAQAQAQAQAQAQAQA-QAQAQAQAQAQAQAQAQAQAQAQAQAQ 230
Query: 259 PQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQ 318
QA+ Q Q + ++AQ + P V + T PS+ T
Sbjct: 231 AQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTAT 290
Query: 319 KQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPP 378
AQT ++P Q Q A P V T PQ HP PP
Sbjct: 291 SVAQTVSTP----TTQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHP----QTLPP 342
Query: 379 EQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGG---GMEKTLPEPVGTQVSM 435
PH+ PQ + P PV+V + +P + G GM + + QV++
Sbjct: 343 ----AVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAI 398
Score = 41.2 bits (95), Expect = 0.004
Identities = 76/302 (25%), Positives = 105/302 (34%), Gaps = 50/302 (16%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQ-QLLQQSPPQAPLPM-AVSRGLPPQ 62
Q Q Q Q Q Q Q Q Q Q Q+Q Q Q+Q Q + S P P AVS
Sbjct: 218 QAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSS 277
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQR-ALLLQQLQGNLRGYGMASPGLA----APSLTPPQ 117
P T S + S+ Q + Q Q +A+P ++ AP+ TP Q
Sbjct: 278 TP-------SSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAPTATPVQ 330
Query: 118 LATPNLQQFFPQATRQSLLGP------------PPVGVPMNPSQFNLSG----------- 154
Q P A S+ P PP VP+ L G
Sbjct: 331 TVPQPHPQTLPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVP 390
Query: 155 -RNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPED-QDLPPCPE 212
+PQ S +T S T + E + P++ ++ E
Sbjct: 391 MIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEE 450
Query: 213 DIAKEKRTPAPEPEPCEA-----SELPAKRLR---SSEEPTEKEPPGQLQVKAQPQARMT 264
I + + P+ EP P E E P K ++ EE TE+E Q KA+P A
Sbjct: 451 KIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQ---KAKPVATAP 507
Query: 265 VP 266
+P
Sbjct: 508 IP 509
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 63.9 bits (154), Expect = 6e-10
Identities = 74/260 (28%), Positives = 94/260 (36%), Gaps = 33/260 (12%)
Query: 137 GPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAE 196
GPPP+ P P F + R P R P D + MP PP G
Sbjct: 42 GPPPLMRP--PPPFGMM-RGPPPPPRPPFGRPPF--DPNMPPMPPPGGIPPPMGPPHLQR 96
Query: 197 PRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVK 256
P P +PP P + P P A PA K P G++
Sbjct: 97 PPFMPPPMSSMPPPPGMMFP------PGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYY 150
Query: 257 AQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 316
AR T+ PD + ++++ P +L QAQVQ+Q Q + Q Q +
Sbjct: 151 ---NARTRESAWTK-PDGVKVIQQSELTP-----MLAAQAQVQAQAQAQ-----AQAQAQ 196
Query: 317 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQ 376
Q QAQ Q Q Q Q Q Q +A+ Q Q Q Q QAQ Q Q Q VQ
Sbjct: 197 AQAQAQAQA--------QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQ 248
Query: 377 PPEQTHEQPHTQPQVSLLAP 396
Q + P S AP
Sbjct: 249 AQVQAQAVGASTPTTSSPAP 268
Score = 55.1 bits (131), Expect = 3e-07
Identities = 109/556 (19%), Positives = 188/556 (33%), Gaps = 82/556 (14%)
Query: 26 QQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP-QQPQQPLLNLQGTNSASLLNGSM 84
+ ++ +L QQ + AP P AV RG PP +P P ++G
Sbjct: 10 ESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPP------ 63
Query: 85 LQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQ--FFPQATRQSLLGPPPVG 142
+ + P + P PP + P+LQ+ F P PPP G
Sbjct: 64 --------RPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSM---PPPPG 112
Query: 143 VPMNPSQFNLSGRN----PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPR 198
+ P ++ P + + TP+ K E P+G + +
Sbjct: 113 MMFPPGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSE 172
Query: 199 MDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQ 258
+ TP + + A +A + A+ ++ + + Q Q +AQ
Sbjct: 173 L-TPMLAAQAQVQAQAQAQAQAQAQAQAQAQA-QAQAQAQAQAQAQAQAQAQAQAQAQAQ 230
Query: 259 PQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQ 318
QA+ Q Q + ++AQ + P V + T PS+ T
Sbjct: 231 AQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTAT 290
Query: 319 KQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPP 378
AQT ++P Q Q A P V T PQ HP PP
Sbjct: 291 SVAQTVSTP----TTQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHP----QTLPP 342
Query: 379 EQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEI 438
PH+ PQ + P PV+V PP V G +P P+ M+ +
Sbjct: 343 ----AVPHSVPQPTTAIPAFPPVMV-------PPFRVPLPG-----MPIPLPGVAMMQIV 386
Query: 439 QNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSS 498
+C + +PG+ P+ P+ P ++++
Sbjct: 387 ----SCPYVKTVATTKTGVLPGM---------------------APPIVPMIHPQVAIAA 421
Query: 499 TPA--ATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLL--S 554
+PA A +T + ++ K + + + +PQ + +++ + + S
Sbjct: 422 SPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPS 481
Query: 555 LLPVPRDVLETEDEEP 570
P+P +ETE+E+P
Sbjct: 482 EEPLP---METEEEDP 494
Score = 33.5 bits (75), Expect = 0.82
Identities = 46/154 (29%), Positives = 58/154 (37%), Gaps = 21/154 (13%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQ-QLLQQSPPQAPLPM-AVSRGLPPQ 62
Q Q Q Q Q Q Q Q Q Q Q+Q Q Q+Q Q + S P P AVS
Sbjct: 218 QAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSS 277
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQR-ALLLQQLQGNLRGYGMASPGLA----APSLTPPQ 117
P T S + S+ Q + Q Q +A+P ++ AP+ TP Q
Sbjct: 278 TP-------SSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAPTATPVQ 330
Query: 118 LATPNLQQFFPQATRQSLLGP-------PPVGVP 144
Q P A S+ P PPV VP
Sbjct: 331 TVPQPHPQTLPPAVPHSVPQPTTAIPAFPPVMVP 364
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 63.5 bits (153), Expect = 7e-10
Identities = 83/367 (22%), Positives = 137/367 (37%), Gaps = 75/367 (20%)
Query: 106 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGR---------- 155
P P + PP+ P + P A + PP VP P + +
Sbjct: 10491 PPTKVPEVLPPKEVVPEKKVPVPPAKKPEA---PPPKVPEAPKEVVPEKKVPVPPPKKPE 10547
Query: 156 -NPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEE-----------AAEPRMDTPE 203
P K + P +K + +P + +S PPE E AA P+
Sbjct: 10548 VPPTKVPEVPKAAVPEKK--VPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVT 10605
Query: 204 DQDLPPCPEDIAKEKRTPAPEPE-----PCEASELPAKRLRSS----------------- 241
+P P+++ EK+ P P P+ P + E+P +
Sbjct: 10606 PVKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPESPPPEV 10665
Query: 242 -EEPTE---KEPPGQLQVKAQPQA--RMTVPKQTQTPDLLPEALEAQVLPRFQP-RVLQV 294
EEP E +EPP ++ + +P A ++TVP + P+ A+ A+ P P +V +V
Sbjct: 10666 FEEPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKPVPEKKAPAVVAK-KPELPPVKVPEV 10724
Query: 295 QAQVQSQTQ-----PRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQK 349
+V + + P+ P P++ K+ V+ +K+V + E P K
Sbjct: 10725 PKEVVPEKKVPLVVPKKPEAPPAKVPEVPKE----------VVPEKKVAVPKKPEVPPAK 10774
Query: 350 QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV-VVHVCGL 408
P+V + +P P + PPE E P+ + E+ PV V
Sbjct: 10775 --VPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEEIAPEEEIAPEEEKPVPVAEEEEP 10832
Query: 409 EMPPDAV 415
E+PP AV
Sbjct: 10833 EVPPPAV 10839
Score = 58.5 bits (140), Expect = 2e-08
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 22/248 (8%)
Query: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
P+K P K + V + PE P+ + P +P P+
Sbjct: 9954 PRKPVPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVP 10013
Query: 217 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEP-PGQLQVKAQPQARMTVPKQTQTPDLL 275
E++ P P P+ EA + P +K P P +V+A P VPK+ L+
Sbjct: 10014 EEKVPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKK-----LI 10068
Query: 276 PEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQK 335
PE + +P+ +V+A P++P V + + + E ++ ++
Sbjct: 10069 PEEKKPTPVPK------KVEA-----PPPKVPKKREPVPVPVALPQEEEVLFEEEIVPEE 10117
Query: 336 QVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQ-THEQPHTQPQVSLL 394
+V P+ ++ +++V P+ + + + +E PP + V P E+ E+ P+ +L
Sbjct: 10118 EVLPEEEEVLPEEEEVLPE---EEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVL 10174
Query: 395 APEQTPVV 402
PE P V
Sbjct: 10175 -PEVKPKV 10181
Score = 51.6 bits (122), Expect = 3e-06
Identities = 75/330 (22%), Positives = 130/330 (39%), Gaps = 46/330 (13%)
Query: 105 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGP-----PPVGVPMNPSQFNLSGRNPQK 159
+P + A P + P + + + L+ P PP VP P + P+K
Sbjct: 10706 APAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEVPKEVV-----PEK 10760
Query: 160 Q-ARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK 218
+ A P K PV ++ E A P + E+ + E+IA E+
Sbjct: 10761 KVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEEIAPEEEIAPEE 10820
Query: 219 RTPAP-----EPE--PCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQT 271
P P EPE P E P K + + P K+P + +P+ + PK
Sbjct: 10821 EKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPR 10880
Query: 272 P----------DLLPEALEAQVLPRFQ-PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQ 320
P D+ + + + +P+ + P QV +V+ T ++P + +V+ KL +
Sbjct: 10881 PPPPPPAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVE-LTPLKVPGGEKKVR-KLLPE 10938
Query: 321 AQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV-SVQPPE 379
+ + E ++ K V + +E EP +V+P+ + + P+ PP V V+ P
Sbjct: 10939 RKPEPKEEVVL---KSVLRKRPEEEEP--KVEPKKLEKVKKPAVPEPPPPKPVEEVEVPT 10993
Query: 380 QTHEQ---------PHTQPQVSLLAPEQTP 400
T + P +P + L APE P
Sbjct: 10994 VTKRERKIPEPTKVPEIKPAIPLPAPEPKP 11023
Score = 51.2 bits (121), Expect = 4e-06
Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 14/210 (6%)
Query: 222 APEPEPCEASELPAKRLRSSEEPTE-KEPPGQLQVKAQPQARMT-VPKQTQTPDLLPEAL 279
A E E E + P K SE+ K+PP ++ + +P A++ VPK+ + +
Sbjct: 10427 AEEVEVFEKPKAPPKGPEISEKIIPPKKPPTKVVPRKEPPAKVPEVPKKIVVEEKVRVPE 10486
Query: 280 EAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQP 339
E +V P P VL + V + P P+ + P +A + PE V V P
Sbjct: 10487 EPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKV----PVPP 10542
Query: 340 QLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSL-LAPEQ 398
+ E P K P+V A P + E P + PPE P+ + AP +
Sbjct: 10543 PKKPEVPPTK--VPEVPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPK 10600
Query: 399 TPVVVHVCGLEMPPDAVEAGGGMEKTLPEP 428
P V V E P + V EK +P P
Sbjct: 10601 KPEVTPVKVPEAPKEVVP-----EKKVPVP 10625
Score = 46.2 bits (108), Expect = 1e-04
Identities = 63/302 (20%), Positives = 118/302 (39%), Gaps = 58/302 (19%)
Query: 139 PPVGVPMNPSQFNLSGRNPQ---KQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAA 195
PP VP P + + P K+ P +++ PV P+ E
Sbjct: 10056 PPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKRE------PVPVPVALPQEEEVLF 10109
Query: 196 EPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC--EASELPAKRLRSSEEPTEKEPPGQL 253
E + PE++ LP E++ E+ PE E E E+P P E+E P +
Sbjct: 10110 EEEI-VPEEEVLPE-EEEVLPEEEEVLPEEEEVLPEEEEIP---------PEEEEVPPEE 10158
Query: 254 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQ---PRIPSTD 310
+ P+ VP++ P++ P+ +P + +V + + + + + ++P
Sbjct: 10159 EY--VPEEEEFVPEEEVLPEVKPKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVP 10216
Query: 311 TQVQPK---LQKQ-----AQTQTSPEHLVLQQKQV---QPQLQQEAEPQKQVQPQVHTQA 359
+V+ K L K+ + PE + ++++ P +++ E P+V +A
Sbjct: 10217 KKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKKA 10276
Query: 360 QPSV-----QPQEHPPAQVSVQ---------------PPEQTHEQPHTQPQVSLLAPEQT 399
P + E PPA+VS + PP + E P P+ +L P++
Sbjct: 10277 VPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKKE 10336
Query: 400 PV 401
V
Sbjct: 10337 AV 10338
Score = 46.2 bits (108), Expect = 1e-04
Identities = 79/369 (21%), Positives = 148/369 (40%), Gaps = 66/369 (17%)
Query: 115 PPQLATPNLQQFFPQATRQSLLGPP-PVGVPMNPSQFNLSGRN---PQKQARTSSST--T 168
P + P ++F P+ + P PV P+ + ++ + P+K+ +
Sbjct: 10156 PEEEYVPEEEEFVPEEEVLPEVKPKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEV 10215
Query: 169 PNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK----------EK 218
P + + +P E++ P E +EE E + E + PP E++ + +K
Sbjct: 10216 PKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIKK 10275
Query: 219 RTP-APEPEPCEASELPAKRLRSSEE-----PTEKE--PPGQLQ--VKAQPQARMTVPKQ 268
P AP P P + PAK + E P +K+ PP ++ K P+ ++ VPK+
Sbjct: 10276 AVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKK 10335
Query: 269 TQTPDLLPE-ALEAQVLPRFQPRVL---QVQAQVQSQTQPRIPSTDT--QVQPKLQ---- 318
P LE +V F+ V+ +++ +V IP + +V+ +
Sbjct: 10336 EAVPPAKGRTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEEEFHEVEEYFEEGEF 10395
Query: 319 -------KQAQTQTSPEHL---------VLQQKQVQPQLQQEAEPQ-KQVQPQVHTQAQP 361
K Q + EH V + ++V+ + +A P+ ++ ++ +P
Sbjct: 10396 HEVEEFIKLEQHRVEEEHRVEKVHRVIEVFEAEEVEVFEKPKAPPKGPEISEKIIPPKKP 10455
Query: 362 --SVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGG 419
V P++ PPA+V P + E+ P+ + P + P V +PP V
Sbjct: 10456 PTKVVPRKEPPAKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEV-------LPPKEVVP-- 10506
Query: 420 GMEKTLPEP 428
EK +P P
Sbjct: 10507 --EKKVPVP 10513
Score = 46.2 bits (108), Expect = 1e-04
Identities = 79/344 (22%), Positives = 132/344 (38%), Gaps = 81/344 (23%)
Query: 139 PPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVED---KSDPPEGSEEAA 195
PP VP P + L + + S P + + P E+ + + P E
Sbjct: 10771 PPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEEIAPEEEIAPEEEKPVPVAEEE 10830
Query: 196 EPRMDTPEDQDLPPCPEDIAKEKRTP------AP---EPEPCEASELPAKRLRSSEEPTE 246
EP + P +P P+ I EK+ P AP EPEP + E P +L+ P
Sbjct: 10831 EPEVPPPA---VPEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKP--KLKPRPPPPP 10885
Query: 247 KEPPGQ------LQVKAQPQARMTVPKQTQTPDLL----------------------PEA 278
PP + Q+KA P+ + VP++ Q P+ + PE
Sbjct: 10886 PAPPKEDVKEKIFQLKAIPKKK--VPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEP 10943
Query: 279 LEAQVL------------PRFQPRVLQ-VQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQT 325
E VL P+ +P+ L+ V+ + P P + +V P + K+ +
Sbjct: 10944 KEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPPPPKPVEEVEV-PTVTKRERKIP 11002
Query: 326 SPEHLVLQQKQVQPQLQQEA-EPQKQVQPQVHTQAQPSVQPQEHP---PAQVSVQPPEQT 381
P + +++P + A EP+ + + +V T P V+P+ P P V V +
Sbjct: 11003 EPTKV----PEIKPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAE 11058
Query: 382 HEQPH---TQPQVSLL-APEQTPVVVHV--------CGLEMPPD 413
+ P +P+ + P++TP + G E PPD
Sbjct: 11059 AKAPKEEAAKPKGPIKGVPKKTPSPIEAERRKLRPGSGGEKPPD 11102
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/262 (17%), Positives = 105/262 (40%), Gaps = 34/262 (12%)
Query: 198 RMDTPEDQDLPPCPEDIAKEKRTPAPEP---------------EPCEASELPAKRLRSSE 242
+++ P +P P+ I EK+ PAP P +P ++P K ++ E
Sbjct: 9571 KIEEPPPAKVPEAPKKIVPEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVPPKVIKMEE 9630
Query: 243 EPTEKEPPGQLQVKAQPQARMTVPKQTQTPD---------LLPEALEAQVLPRFQ----P 289
K +Q+ + + + V K+ P +PE ++ P+ +
Sbjct: 9631 PLPAKVTERHMQITQEEKVLVAVTKKEAPPKARVPEEPKRAVPEEKVLKLKPKREEEPPA 9690
Query: 290 RVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQK 349
+V + + +V + + I + + QP +++ + L+++ V Q ++E E +
Sbjct: 9691 KVTEFRKRVVKEEKVSIEAPKREPQP-IKEVTIMEEKERAYTLEEEAVSVQREEEYEEYE 9749
Query: 350 QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQ--VSLLAPEQTPVVVHVCG 407
+ + + +P+ + ++ + + HE+ T+P+ + + + PV
Sbjct: 9750 EYDYKEFEEYEPTEEYDQYEEYEEREYERYEEHEEYITEPEKPIPVKPVPEEPVPTKP-- 9807
Query: 408 LEMPPDAVEAGGGMEKTLPEPV 429
+ PP V E+ +P P+
Sbjct: 9808 -KAPPAKVLKKAVPEEKVPVPI 9828
Score = 41.6 bits (96), Expect = 0.003
Identities = 53/265 (20%), Positives = 101/265 (38%), Gaps = 23/265 (8%)
Query: 179 MPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPE----PCEASELP 234
+P+ K +PP + P+ PE++ P P+ KE P PE P ++P
Sbjct: 9303 VPIPKKVEPP-APKVPEVPKKPVPEEKKPVPVPK---KEPAAPPKVPEVPKKPVPEEKIP 9358
Query: 235 AKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQV------LPRFQ 288
+ E P K P Q V + + + ++ P +PE + +V +PR +
Sbjct: 9359 VPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVPEERKPVPRKE 9418
Query: 289 PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQA---QTQTSPEHLVLQQKQVQPQLQQEA 345
V +V + + +P V + K+A + + S + +V +++ V + A
Sbjct: 9419 EEV-PPPPKVPALPKKPVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFA 9477
Query: 346 EPQKQVQPQVHTQAQPS-VQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVV- 403
PQ+ + A+ +E +SV E+ E+ + + E VV
Sbjct: 9478 VPQRVEVTRHEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEEYVVE 9537
Query: 404 ---HVCGLEMPPDAVEAGGGMEKTL 425
H+ + + E EK +
Sbjct: 9538 EKLHIISKRVEAEPAEVTERQEKKI 9562
Score = 40.4 bits (93), Expect = 0.007
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 40/244 (16%)
Query: 224 EPEPCEASELPAKRLRSSEEPTE-KEPPGQLQVKAQPQARMTVP---KQTQTPDLLPEA- 278
EPE +P K + PT+ K PP ++ KA P+ ++ VP K P +PE
Sbjct: 9788 EPE----KPIPVKPVPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPPPKVPEEP 9843
Query: 279 -------LEAQVLPRFQPRVLQVQAQVQSQ-----TQPRIPSTDTQVQPKLQ-KQAQTQT 325
+ + R + +V + A+V + + ++P +V P ++ + +
Sbjct: 9844 KKVFEEKIRISITKREKEQVTEPAAKVPMKPKRVVAEEKVPVPRKEVAPPVRVPEVPKEL 9903
Query: 326 SPEHLVLQQK---QVQPQLQQEAEPQKQVQPQVHTQAQ---------PSVQPQEHPPAQV 373
PE + +++ V+ L +E E + + T+ + P V + P +
Sbjct: 9904 EPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVPEEKK 9963
Query: 374 SVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDA----VEAGGGMEKTLPEPV 429
V P++ P P+V E+ PV++ E PP A V E+ +P PV
Sbjct: 9964 PVPVPKKKEAPPAKVPEVPKKPEEKVPVLIP--KKEKPPPAKVPEVPKKPVPEEKVPVPV 10021
Query: 430 GTQV 433
+V
Sbjct: 10022 PKKV 10025
Score = 37.4 bits (85), Expect = 0.057
Identities = 41/227 (18%), Positives = 87/227 (38%), Gaps = 10/227 (4%)
Query: 163 TSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAA---EPRMDTPEDQDLPPCPEDIAKEKR 219
T S R D M + + + EG EPR + +L ++I E +
Sbjct: 8874 TESQKYNFRNDGRCHYMTIHNVTPDDEGVYSVIARLEPRGEARSTAELYLTTKEIKLELK 8933
Query: 220 TPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEAL 279
P +P + + E P PP L + P+ + PK+ + +
Sbjct: 8934 PPDIPDSRVPIPTMPIRAVPPEEIPPVVAPPIPLLLPT-PEEKKPPPKRIEVTKKAVKKD 8992
Query: 280 EAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQP 339
+V+ + P+ + + ++ + P T + K + + E + + +
Sbjct: 8993 AKKVVAK--PKEMTPREEIVKKPPP----PTTLIPAKAPEIIDVSSKAEEVKIMTITRKK 9046
Query: 340 QLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPH 386
++Q+E E + + VH + + ++ E P ++ V+P + EQP+
Sbjct: 9047 EVQKEKEAVYEKKQAVHKEKRVFIESFEEPYDELEVEPYTEPFEQPY 9093
Score = 36.2 bits (82), Expect = 0.13
Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 57/340 (16%)
Query: 189 EGSEEAAEPRMDTPEDQDLPPCPEDI---AKEKRTPAPEPE---PCEASELPAKRLRSSE 242
EG +E E + +++++ +++ + E++ PA PE P + + E
Sbjct: 9131 EGYDEGEEEWEEAYQEREVIQVQKEVYEESHERKVPAKVPEKKAPPPPKVIKKPVIEKIE 9190
Query: 243 EPTEKEPPGQLQVKAQPQ-ARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 301
+ + + ++QV P+ ++ VP++ + E +E +V P V + + +
Sbjct: 9191 KTSRRMEEEKVQVTKVPEVSKKIVPQKPSRTPVQEEVIEVKV-----PAVHTKKMVISEE 9245
Query: 302 TQPRIPSTDTQVQ---PKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQ 358
T+ +V P++QK+ T+ V K+V+P + P+K +V
Sbjct: 9246 KMFFASHTEEEVSVTVPEVQKEIVTEEKIH--VAISKRVEPPPKVPELPEKPAPEEVAPV 9303
Query: 359 AQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAG 418
P P + P ++P P+ AP + P E+P V
Sbjct: 9304 PIPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVP--------EVPKKPVP-- 9353
Query: 419 GGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDS 478
E+ +P PV + + A V E + G K+TI+ +
Sbjct: 9354 ---EEKIPVPVA--------KKKEAPPAKVPEVQK---------GVVTEEKITIVTQREE 9393
Query: 479 RAFSTVP----------LTPVPRPSDSVSSTPAATSTPSK 508
VP PVPR + V P + P K
Sbjct: 9394 SPPPAVPEIPKKKVPEERKPVPRKEEEVPPPPKVPALPKK 9433
Score = 35.8 bits (81), Expect = 0.16
Identities = 32/175 (18%), Positives = 72/175 (41%), Gaps = 14/175 (8%)
Query: 211 PEDIAKEKRTPAPEPEPC-EASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQT 269
PE+I P P P E + P KR+ +++ +K+ + + R + K+
Sbjct: 8954 PEEIPPVVAPPIPLLLPTPEEKKPPPKRIEVTKKAVKKDAKKVVAKPKEMTPREEIVKKP 9013
Query: 270 QTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEH 329
P L +P P ++ V ++ + I + ++QK+ + +
Sbjct: 9014 PPPTTL--------IPAKAPEIIDVSSKAEEVKIMTITR-----KKEVQKEKEAVYEKKQ 9060
Query: 330 LVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQ 384
V ++K+V + +E + +V+P QP + + ++ V+ ++ HE+
Sbjct: 9061 AVHKEKRVFIESFEEPYDELEVEPYTEPFEQPYYEEPDEDYEEIKVEAKKEVHEE 9115
Score = 35.8 bits (81), Expect = 0.16
Identities = 59/291 (20%), Positives = 108/291 (37%), Gaps = 48/291 (16%)
Query: 105 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS 164
SP A P + P+ P ++ P+ + PPP VP P +
Sbjct: 9394 SPPPAVPEI--PKKKVPEERKPVPRKEEEV---PPPPKVPALPKK--------------- 9433
Query: 165 SSTTPNRKDSSSQTMPVEDKSDPP----------EGSEEAAEPRMDTPEDQDLPPCPEDI 214
P ++ + +PV K+ PP E AE ++ Q + ++
Sbjct: 9434 ----PVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEV 9489
Query: 215 AKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDL 274
+ E+ E E E + R EE E E + +V +P+ V ++
Sbjct: 9490 SAEEEWSYSEEE--EGVSISVYREEEREEEEEAEVT-EYEVMEEPE-EYVVEEKLHIISK 9545
Query: 275 LPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQ 334
EA A+V R + +++ +P+IP+ + P +A + PE V
Sbjct: 9546 RVEAEPAEVTERQEKKIV---------LKPKIPAKIEEPPPAKVPEAPKKIVPEKKVPAP 9596
Query: 335 KQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHP-PAQVSVQPPEQTHEQ 384
+ ++ P++ +P + P V E P PA+V+ + + T E+
Sbjct: 9597 VPKKEKVPPPKVPEEPKKPVPEKKVPPKVIKMEEPLPAKVTERHMQITQEE 9647
Score = 34.7 bits (78), Expect = 0.37
Identities = 56/302 (18%), Positives = 108/302 (35%), Gaps = 51/302 (16%)
Query: 113 LTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNP---QKQARTSSSTTP 169
+ P + P ++ P A + PPP VP P + + P + +A P
Sbjct: 10810 IAPEEEIAPEEEKPVPVAEEEEPEVPPPA-VPEEPKKIIPEKKVPVIKKPEAPPPKEPEP 10868
Query: 170 NRKDSSSQTMPVEDKSDPPEGSEEAAE--------PRMDTPEDQDLPPCPE--------- 212
+ + P P E+ E P+ PE +P E
Sbjct: 10869 EKVIEKPKLKPRPPPPPPAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVELTPLKVPGG 10928
Query: 213 DIAKEKRTPAPEPEPCEASELPA---------------KRLRSSEEPTEKEPPG-----Q 252
+ K P +PEP E L + K+L ++P EPP +
Sbjct: 10929 EKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPPPPKPVEE 10988
Query: 253 LQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQ 312
++V + +P+ T+ P++ P A LP +P+ + +A+V++ P + T
Sbjct: 10989 VEVPTVTKRERKIPEPTKVPEIKP----AIPLPAPEPKP-KPEAEVKTIKPPPVEPEPTP 11043
Query: 313 VQ-----PKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQE 367
+ P + K+A+ + E + ++ ++ P + + ++ + P E
Sbjct: 11044 IAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKGVPKKTPSPIEAERRKLRPGSGGEKPPDE 11103
Query: 368 HP 369
P
Sbjct: 11104 AP 11105
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 63.2 bits (152), Expect = 1e-09
Identities = 90/360 (25%), Positives = 113/360 (31%), Gaps = 69/360 (19%)
Query: 106 PGLAAPSLT-PPQLATPNLQQFFPQATRQSLLGP----PPVGVPMNPSQFNLSGRNPQKQ 160
P A PS+T PP A P+LQ P SL P PP + ++ Q S +P Q
Sbjct: 365 PSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQ 424
Query: 161 ARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRT 220
A S T R+ +S T P S PP+ P + P LP P
Sbjct: 425 ATHSFLTMSPRQTQASLTSPSRPASTPPD------SPPLQAP--LSLPASPPLQTSLSPA 476
Query: 221 PAPEPEPCEASELPAKRLRSSEEPTEK-----EPPGQLQVK------AQPQARMTVPKQT 269
+P P L A +S P PP + Q P A +T P
Sbjct: 477 VSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLE 536
Query: 270 QTPDLLPEALEAQVLPRFQPRV----------LQVQAQVQSQTQPRIPST---------D 310
P L P L+ P P + LQ + P PS+
Sbjct: 537 NLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPP 596
Query: 311 TQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL---QQEAEPQKQVQPQVHTQAQPSVQ--- 364
P LQ SP L Q P L +A P P + A PS Q
Sbjct: 597 ALASPPLQGLPSPPLSP--LATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPN 654
Query: 365 ------------PQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPP 412
P PP Q PP P P P Q P + L++PP
Sbjct: 655 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP------PSQAPPSLAAPPLQVPP 708
Score = 57.0 bits (136), Expect = 7e-08
Identities = 84/324 (25%), Positives = 110/324 (33%), Gaps = 52/324 (16%)
Query: 108 LAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSST 167
L++P P A +L PQA SL+ PP +Q +L+ P Q +S T
Sbjct: 480 LSSPLTIHPLQALSSLASHSPQAPLSSLIMPPL------ETQSSLAP--PSLQTPPASLT 531
Query: 168 TPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCP-----EDIAKEKRTPA 222
TP ++ S P + P + P P PP P + TP
Sbjct: 532 TPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPP 591
Query: 223 PEPEPCEASE----LPAKRLRSSEEPTEKEPPG----QLQVKAQPQARMTV-PKQTQTPD 273
P+ P AS LP+ L P + PP LQ P A + P T +P
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 274 LLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQ 333
P AL +L P P VQ A SP
Sbjct: 652 A-PNALAVHLLQA-----------------PFSPPPSPPVQAPFSPPASPPVSPS--ATP 691
Query: 334 QKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVS---VQPPEQTHEQPHTQPQ 390
Q P L A P QV P A P + P PP Q PP Q P P
Sbjct: 692 PSQAPPSL---AAPPLQVPPS--PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPP 746
Query: 391 VSLLA--PEQTPVVVHVCGLEMPP 412
+S A P + P ++ L++PP
Sbjct: 747 MSPSATPPPRVPPLLAAPPLQVPP 770
Score = 47.4 bits (111), Expect = 5e-05
Identities = 97/437 (22%), Positives = 155/437 (35%), Gaps = 60/437 (13%)
Query: 96 GNLRGYGMASP---GLAAPSLTPPQLATPNLQQFFPQATRQSL---LGPPPVGVPMNPSQ 149
G L +A+P G A + PP A L P + + L PP P +
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQT 356
Query: 150 FNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPP 209
P QA S +T P + S QT+P P + P + PP
Sbjct: 357 LPSPPATPPSQAPPSMTTPPMQAPPSLQTIP------PIQVPHSLTSPSLQA------PP 404
Query: 210 CPEDIAKEKRTPAPEPEPCEASE-----LPAKRLRSSEEPTE--KEPPGQLQVKAQPQAR 262
P ++ + T + +A+ P + S P+ PP ++A
Sbjct: 405 SPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLP 464
Query: 263 MTVPKQTQ-TPDLLPEALEAQVLPRFQPRVL---QVQAQVQSQTQPRIPSTDTQVQPKLQ 318
+ P QT +P + P + + P L QA + S P + + + P LQ
Sbjct: 465 ASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQ 524
Query: 319 KQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPP 378
+ T+P L P LQ + P P + T P+ P + PP+ ++ PP
Sbjct: 525 TPPASLTTPP-LENLPSLAPPPLQTASAP--LTTPHLETPPCPAPCPLQAPPSPLTTPPP 581
Query: 379 EQTHEQPHTQPQVSLLAPEQTPVVVH--VCGLEMPPDAVEAGGGMEKTLPEPVGTQVSME 436
E T ++ P+ P + + GL PP + A T P +++
Sbjct: 582 E-------TPSSIATPPPQAPPALASPPLQGLPSPPLSPLA------TPPPQAPPXLALP 628
Query: 437 EIQNESA--CGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSD 494
+Q + + + + P +L V +LQ+ FS P PV P
Sbjct: 629 PLQAPPSPPASPPLSPLATPSPQAP------NALAVHLLQA----PFSPPPSPPVQAPFS 678
Query: 495 SVSSTPAATS-TPSKQA 510
+S P + S TP QA
Sbjct: 679 PPASPPVSPSATPPSQA 695
Score = 42.0 bits (97), Expect = 0.002
Identities = 74/307 (24%), Positives = 103/307 (33%), Gaps = 45/307 (14%)
Query: 138 PPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEP 197
P PV P S G QK R S+ T R ++ + P+ S +A
Sbjct: 111 PGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKAT----------EAPKRSALSAGA 160
Query: 198 RMDTPEDQDLPPCPEDIAKEKRT---------PAPEPEPCEASELPAKRLRSSEE--PTE 246
R DT P P +A+ R PAP P +E P K + S+ E TE
Sbjct: 161 RRDTSGPTPGTPSPA-MARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 219
Query: 247 KEPPGQLQVKA-----QPQARMTVPKQTQTPDLLPEALEAQVLPR-----FQPRVLQVQA 296
P + + A +P +R T A+ PR QP+ +QA
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279
Query: 297 QVQSQ-TQPR---------IPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAE 346
Q T PR + S+ +A+ P++ P A
Sbjct: 280 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLAT 339
Query: 347 PQKQVQPQVHTQAQPSVQPQEHPPAQVSVQ-PPEQTHEQPHTQPQVSLLAPEQTPVVVHV 405
P P A PS+Q PPA Q PP T P + + P Q P +
Sbjct: 340 PLPLAPPS--PSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTS 397
Query: 406 CGLEMPP 412
L+ PP
Sbjct: 398 PSLQAPP 404
Score = 37.7 bits (86), Expect = 0.043
Identities = 54/208 (25%), Positives = 70/208 (33%), Gaps = 45/208 (21%)
Query: 46 PPQAPLPMAVSR-GLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMA 104
PPQAP P+A +PP P P ++ T + L A LQ M
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV---PPLLAAPPLQVPPSPPASLPM- 778
Query: 105 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS 164
SP P PP LATP LQ L PP P + F+ S P S
Sbjct: 779 SPLAKPPPQAPPALATPPLQ----------ALPSPPASFP-GQAPFSPSASLPM-----S 822
Query: 165 SSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPE 224
TP PP+ A P + P PP + +R P P
Sbjct: 823 PLATP-----------------PPQAPPVLAAPLLQVPPS---PPASPTLQAPRRPPTPG 862
Query: 225 PEPCEASELPAKRLRSSEEPTEKEPPGQ 252
P+ + + RL + P PP +
Sbjct: 863 PD----TSVSGPRLTLALAPGPPPPPSR 886
Score = 31.2 bits (69), Expect = 4.1
Identities = 80/297 (26%), Positives = 99/297 (33%), Gaps = 57/297 (19%)
Query: 42 LQQSP-PQAPLPMAVSRGLPPQQP---QQPLLNLQGTNSASLLNGSMLQRALLLQQLQGN 97
LQ P P A LPM+ PPQ P P L + AS + + L
Sbjct: 766 LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM---- 821
Query: 98 LRGYGMASPGLAAPSLTPPQLATPNLQ-QFFPQA--TRQSLLGPPPVGVPMNPS----QF 150
SP P PP LA P LQ P A T Q+ PP G + S
Sbjct: 822 -------SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 874
Query: 151 NLSGRNPQKQARTSSSTTPN---RKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDL 207
L+ P +R+ SST SSS T E+ G E A P D +L
Sbjct: 875 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGA--AASPPPDAEL 932
Query: 208 PPCPEDIAKEKRTPAP---------EPEPCEASELPAK-----RLRSSEEPTEKEP-PGQ 252
C A R PAP P P + P + +E P P PG
Sbjct: 933 AACHP--AAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA 990
Query: 253 LQVKAQP-------------QARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQA 296
L P A PKQ + +L AL+A V+ R L + A
Sbjct: 991 LDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAA 1047
>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
Length = 1227
Score = 62.8 bits (151), Expect = 1e-09
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 615 KTPRKFVEHVKSQGH-KDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDE 673
+ P FV+ K++G +D A E LE++ + E + C E E +
Sbjct: 1057 RQPSPFVDDCKTRGTPEDGACEGSPLEEKASPPIETD---LQNQACQEVLTPENSRYVEM 1113
Query: 674 EEIEVEEELCKQVRSRD-ISREEWKGSETYSP-NTAYGVDFLVPVMGYICRICHKFYHSN 731
+ +EV +V + +S W+ + +S + GV+F+VP G+ C++C FY S
Sbjct: 1114 KSLEVRSPEYTEVELKQPLSLPSWEPEDVFSELSIPLGVEFVVPRTGFYCKLCGLFYTSE 1173
Query: 732 SGAQLSHCKSLGHFENLQKY 751
A++SHC+S H+ NLQKY
Sbjct: 1174 ETAKMSHCRSAVHYRNLQKY 1193
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 62.8 bits (151), Expect = 1e-09
Identities = 67/306 (21%), Positives = 117/306 (38%), Gaps = 45/306 (14%)
Query: 184 KSDPPEGSE--EAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSS 241
+SD EG E EA E + P D + + PE E EA E + S
Sbjct: 1828 QSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPES 1887
Query: 242 EEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 301
E+ E ++Q +++ K+ Q EALE + +
Sbjct: 1888 EDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETE-----------------GE 1930
Query: 302 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQ--- 358
+P + Q + ++A+ QT PE V++ ++ + + Q E+E + ++ +V TQ
Sbjct: 1931 DEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAE 1990
Query: 359 --AQPSVQPQEHPPAQ----------------VSVQPPEQTHEQPHTQPQVSLLAPEQTP 400
AQP + E P A+ V QP + E + + + P
Sbjct: 1991 GEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQP 2050
Query: 401 VVVHVCGLEMPPDAVEAGGGMEKTLPE--PVGTQVSMEEIQNES---ACGLDVGECENRA 455
V E +A EA G +++ E P V +E + E+ + G++ E E A
Sbjct: 2051 ESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEA 2110
Query: 456 REMPGV 461
++ G+
Sbjct: 2111 QKAEGI 2116
Score = 53.9 bits (128), Expect = 6e-07
Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQ-DLPPCPEDI- 214
P+ + + + + P D + PE EEA E + E + + P ED+
Sbjct: 2027 PKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVD 2086
Query: 215 AKEKRTPA-PEPEPCEASELP--AKRLRSSEEPTEKEPPGQLQVKAQPQAR-MTVPKQTQ 270
A+E A PE E EA E A++ E P + + +AQP++ + P+
Sbjct: 2087 AQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAP-------ETEGEAQPESEGIEAPEAEG 2139
Query: 271 TPDLLPEALEAQVLP-RFQPRVLQVQAQ-VQSQTQPRIPSTDTQVQPKLQKQAQTQTSPE 328
E +EAQ QP ++AQ + + QP + + +A+ + PE
Sbjct: 2140 EAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAP-------EAEGEAQPE 2192
Query: 329 HLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQ--THEQPH 386
++ + + + Q E E + P+ +AQP + E P A+ QP + T +
Sbjct: 2193 SEGIEAPEAEGEAQPELEGVEA--PEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKK 2250
Query: 387 TQPQVSL 393
PQVSL
Sbjct: 2251 GSPQVSL 2257
Score = 45.4 bits (106), Expect = 2e-04
Identities = 87/440 (19%), Positives = 159/440 (36%), Gaps = 65/440 (14%)
Query: 158 QKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPE--DQDLPPCPEDIA 215
+ Q + TP ++ + P + ++ PE +EA +P ++ E + + PE
Sbjct: 1882 EAQPESEDVETP---EAEWEVQPESEGAEAPEAEKEA-QPETESVEALETEGEDEPESEG 1937
Query: 216 KEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLL 275
E + + E P + S+E E+ P V+A + V Q +
Sbjct: 1938 AEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEA---LEVEVETQEAEGEAQ 1994
Query: 276 PEALEAQVLPRFQPRVLQVQAQVQSQT-----QPRIPSTDTQVQPKLQKQAQTQTSPEHL 330
PE+ + + P + + + + + Q ++ QP+ + Q ++ + PE
Sbjct: 1995 PESEDVEA-PEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESD 2053
Query: 331 VLQQKQVQPQLQQEAEPQKQVQPQVHT------------QAQPSVQPQEHPPAQVSVQPP 378
++ + + + Q+ ++ + + H +AQP + E P A+ Q
Sbjct: 2054 GVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKA 2113
Query: 379 EQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDA--VEAGGGMEKTLPEPVG--TQVS 434
E E P T+ + PE + E P++ VEA + PE G Q +
Sbjct: 2114 EGI-EAPETEGEAQ---PESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEA 2169
Query: 435 MEEIQNESACGLDVGECENRAR-EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPS 493
EE Q E G++ E E A+ E G+ ++ A + P
Sbjct: 2170 EEEAQPELE-GVEAPEAEGEAQPESEGIEA----------PEAEGEAQPELEGVEAPEAE 2218
Query: 494 DSVSSTPAATSTPSKQALQFFCYICKASCSSQQEFQ-DHMSEPQHQQRLGEIQHMSQACL 552
+ P TP + +A S+ E Q + PQ G+ + S+
Sbjct: 2219 EEAQPEPEGVETPEAEG--------EAQPESEGETQGEKKGSPQVSLGDGQSEEASE--- 2267
Query: 553 LSLLPVPRDVLETEDEEPPP 572
S PVP D PPP
Sbjct: 2268 -SSSPVPED-----RPTPPP 2281
Score = 30.0 bits (66), Expect = 9.0
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 621 VEHVKSQGHKD------KAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEE 674
VE ++++G + +A+E + +E GQ + +++ E +EE + + ED E
Sbjct: 1922 VEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQ---EAEEEAQPESEDVE 1978
Query: 675 EIEVEEELCK-----QVRSRDISREEWKG 698
+EVE E + Q S D+ E +G
Sbjct: 1979 ALEVEVETQEAEGEAQPESEDVEAPEAEG 2007
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 62.4 bits (150), Expect = 2e-09
Identities = 69/298 (23%), Positives = 109/298 (36%), Gaps = 26/298 (8%)
Query: 108 LAAPSLTPPQLATPNLQQFF-PQATRQSLLGPPPVGVPMNPSQFN---LSGRNPQKQART 163
+AAP +P + + F+ PQ ++ P P P P G + R
Sbjct: 1 MAAPRPSPAISVSVSAPAFYAPQKKFGPVVAPKPKVNPFRPGDSEPPPAPGAQRAQMGRV 60
Query: 164 SSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAP 223
P +D P+ D EG+ A P P ++ PP P +E+ P+P
Sbjct: 61 GEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAP---LEEEIFPSP 117
Query: 224 EPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQV 283
P P E P + +P EK L++ + + K + +A+V
Sbjct: 118 PPPPEEEGG-PEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKN--------DPFKARV 168
Query: 284 LPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQ 343
+ P + +S T+P + T P + + +Q P QV Q
Sbjct: 169 SSGYVPPPVATPFSSKSSTKPA--AGGTAPLPPWKSPSSSQPLP--------QVPAPAQS 218
Query: 344 EAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV 401
+ + Q QPQ Q Q VQ Q P + + QP P P+ S + P+ TPV
Sbjct: 219 QTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPV 276
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 62.4 bits (150), Expect = 2e-09
Identities = 69/298 (23%), Positives = 109/298 (36%), Gaps = 26/298 (8%)
Query: 108 LAAPSLTPPQLATPNLQQFF-PQATRQSLLGPPPVGVPMNPSQFN---LSGRNPQKQART 163
+AAP +P + + F+ PQ ++ P P P P G + R
Sbjct: 1 MAAPRPSPAISVSVSAPAFYAPQKKFGPVVAPKPKVNPFRPGDSEPPPAPGAQRAQMGRV 60
Query: 164 SSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAP 223
P +D P+ D EG+ A P P ++ PP P +E+ P+P
Sbjct: 61 GEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAP---LEEEIFPSP 117
Query: 224 EPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQV 283
P P E P + +P EK L++ + + K + +A+V
Sbjct: 118 PPPPEEEGG-PEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKN--------DPFKARV 168
Query: 284 LPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQ 343
+ P + +S T+P + T P + + +Q P QV Q
Sbjct: 169 SSGYVPPPVATPFSSKSSTKPA--AGGTAPLPPWKSPSSSQPLP--------QVPAPAQS 218
Query: 344 EAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV 401
+ + Q QPQ Q Q VQ Q P + + QP P P+ S + P+ TPV
Sbjct: 219 QTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPV 276
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 62.0 bits (149), Expect = 2e-09
Identities = 103/421 (24%), Positives = 146/421 (34%), Gaps = 59/421 (14%)
Query: 111 PSLTPPQ-LATPNLQQFFPQA-----TRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS 164
P++TPP TP L P + T S GP P PS P R
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA--TPSHKGGPAMTPPSPKRGP 1393
Query: 165 SSTTPNRKDSSSQTMPVEDKSDP--PEGSEEAAEPRMDTPEDQDLPP---CPEDIAKEKR 219
+ +P +S +P+ K P P E AA TP DL P P + K
Sbjct: 1394 AIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA-----TPSKGDLTPPAVTPVSLKKAPA 1448
Query: 220 TPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEAL 279
T AP+ P S L + P+ KEPP QV A + PK+ P +
Sbjct: 1449 TSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQV-----ATSSSPKKAPA---TPAPM 1500
Query: 280 EAQVLPRFQP-RVLQVQAQVQSQTQPRIPS-------TDTQVQPK--LQKQAQTQTSPEH 329
A LP P +V A S+ P P+ T + PK L A T SP+
Sbjct: 1501 GAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKK 1560
Query: 330 ---LVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPH 386
+ ++ +EA V P + A PS + PPA S P E
Sbjct: 1561 TPAIPTPKEAPATPSSKEASSPPAVTPSTYKGA-PSPKELLIPPAVTSPSPKEAP----- 1614
Query: 387 TQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGL 446
T P V+ +PE+ P G P + T P V ++ Q
Sbjct: 1615 TPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ------- 1667
Query: 447 DVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTP 506
++ +P G +V + + +S T P P+ S +++P P
Sbjct: 1668 -------ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDP 1720
Query: 507 S 507
S
Sbjct: 1721 S 1721
Score = 47.0 bits (110), Expect = 7e-05
Identities = 87/388 (22%), Positives = 136/388 (35%), Gaps = 42/388 (10%)
Query: 33 QQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTN---SASLLNGSMLQRAL 89
++LL + SP +AP P AV+ P + P P T+ + S L S A
Sbjct: 1597 KELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPAS 1656
Query: 90 LLQQLQGNLRGYGMASPGLAAPS------LTPPQLATPNLQ---QFFPQATRQSLLGPPP 140
+ ++ + P P+ + P +TP + + PQ + S PP
Sbjct: 1657 VTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPP- 1715
Query: 141 VGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMD 200
+ +PS N G + P +KDSS +T +D S P+G E +
Sbjct: 1716 --ICPDPSAKN--GSKGPLSTVAPAPLLPVQKDSS-KTAKGKDASHSPKGPLAPPESKAS 1770
Query: 201 TPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQ 260
TP A EK P PE A+ P L + P PP Q + + P
Sbjct: 1771 TPLTA--------AAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPG 1822
Query: 261 ARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQS--QTQPRIPSTDTQVQPKLQ 318
+ P + P A E ++LP P + QS P S V
Sbjct: 1823 LVLESPSKPLAP-----ADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSA 1877
Query: 319 KQAQTQTSP-EHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP 377
KQ T+ + + P+L+++ Q Q Q + + E P V
Sbjct: 1878 KQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQ---QAQLAAAAEIDEEP-----VSK 1929
Query: 378 PEQTHEQPHTQPQVSLLAPEQTPVVVHV 405
+Q+ + + +S L Q V V
Sbjct: 1930 AKQSRSEKKARKAMSKLGLRQVTGVTRV 1957
Score = 43.1 bits (100), Expect = 0.001
Identities = 53/236 (22%), Positives = 73/236 (30%), Gaps = 24/236 (10%)
Query: 45 SPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRG---Y 101
SP PLP P P L + +G + L G+ A +G
Sbjct: 1046 SPAATPLPKGA-----PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPK 1100
Query: 102 GMASPGLAAPS------LTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGR 155
G P A P TPP P P + + L PPP G P P+ S +
Sbjct: 1101 GAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1160
Query: 156 N-----PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPC 210
P K A T+ + TP T + P + + + + TP + P
Sbjct: 1161 GGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1220
Query: 211 PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVP 266
P + P P A PA + P+ K P K P P
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPA-----ATPPSPKGGPATPPPKGAPTPPAATP 1271
Score = 42.4 bits (98), Expect = 0.002
Identities = 92/440 (20%), Positives = 143/440 (32%), Gaps = 39/440 (8%)
Query: 102 GMASP----GLAAPSLTPPQ----LATPNLQ------QFFPQATRQSLLGPPPVGVPMNP 147
G+A+P P+ TPP LATP+ + P + + L P P G P P
Sbjct: 1162 GLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1221
Query: 148 SQFNLSGRN-----PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTP 202
+ S + K A T+ + TP T P + PP + + + + TP
Sbjct: 1222 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATP 1281
Query: 203 EDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQP-QA 261
+ P P + P+P+ P + A ++ P+ K PG K P
Sbjct: 1282 PHKGAPN-PAVVT----PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPP 1336
Query: 262 RMTVPKQTQTPDL---LPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQ 318
+T P TP L P + P + A + P + + P +
Sbjct: 1337 AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP 1396
Query: 319 KQAQTQTSPEHLVLQQKQVQP---QLQQEAEPQK-QVQPQVHTQAQPSVQPQEHPPAQVS 374
TSP + L K+ + A P K + P T P P
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAP---K 1453
Query: 375 VQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGM-EKTLPEPVGTQV 433
P + + T P V+ +P++ P V P A M TLP + +
Sbjct: 1454 GGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSP 1513
Query: 434 SMEEIQNESACGLDVGECENRAREMPGVWGAGGSL---KVTILQSSDSRAFSTVPLTPVP 490
S +++ P +L +T+ + A T P
Sbjct: 1514 KEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPAT 1573
Query: 491 RPSDSVSSTPAATSTPSKQA 510
S SS PA T + K A
Sbjct: 1574 PSSKEASSPPAVTPSTYKGA 1593
Score = 34.3 bits (77), Expect = 0.48
Identities = 73/334 (21%), Positives = 100/334 (29%), Gaps = 67/334 (20%)
Query: 138 PPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPP-----EGSE 192
P P+GV ++P + R P K+ T + SS PVE P +GS+
Sbjct: 794 PSPLGVSVSPQ----TKRPPTKKGSAGPDTPIG--NLSSPVSPVEASFLPENSLSFQGSK 847
Query: 193 EA-AEPRMDTPEDQDLPPCPEDIAK---------EKRTPAPE----PEPCEASELPAKR- 237
++ A TP P P + K TP P P P E PA +
Sbjct: 848 DSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQ 907
Query: 238 -----LRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVL 292
+ SS + P + A P PK TP P A P+ P
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPS-----PKGAPTP---PAATPPS--PKGGP--- 954
Query: 293 QVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQ---QEAEPQK 349
+ P+ T P K SP+ P + P+
Sbjct: 955 -------ATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG 1007
Query: 350 QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPH-------------TQPQVSLLAP 396
P T P P P + + PP T P T P +L +P
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067
Query: 397 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVG 430
+ P + G PP A P P G
Sbjct: 1068 KGGPATPSLKGAPTPPAATPPSPKGGPATPSPKG 1101
Score = 32.0 bits (71), Expect = 2.4
Identities = 77/368 (20%), Positives = 109/368 (29%), Gaps = 60/368 (16%)
Query: 45 SPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMA 104
SP AP P AV+ P P+ L + T + S++N
Sbjct: 860 SPKGAPTPSAVT----PLSPKGVTLPPKETPTPSVVN-------------------LPFP 896
Query: 105 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS 164
G A P+ P Q ++ P+ R + P P G+P +PS K A T
Sbjct: 897 KEGPATPA--PKQAPALSMTSSSPKKARAT---PAPKGIPASPSP---------KGAPTP 942
Query: 165 SSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPE 224
+ TP T + PP + + + TP + P P +
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPAT 1002
Query: 225 PEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVL 284
P P A PA T P G P+ T P TP + A L
Sbjct: 1003 PSPKGAPTPPA--------VTPPSPKGSPAATPFPKGASTPP--AATPPSPKGSPAATPL 1052
Query: 285 PRFQPRVLQVQAQVQSQTQPRIPS-----TDTQVQPKLQKQAQTQTSPEHLVLQQKQVQP 339
P+ P + P PS T P K SP+ + P
Sbjct: 1053 PKGAP-TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPP 1111
Query: 340 QLQQE-AEPQKQVQPQVHTQAQPS------VQPQEHPPAQVSVQPPEQTHEQPHTQPQVS 392
+ A P + P PS P + P + PP P+ +
Sbjct: 1112 SPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171
Query: 393 LLAPEQTP 400
P TP
Sbjct: 1172 PTTPAATP 1179
Score = 31.2 bits (69), Expect = 4.1
Identities = 61/286 (21%), Positives = 86/286 (30%), Gaps = 27/286 (9%)
Query: 143 VPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSS--SQTMPVEDKSD--PPEGSEEAAEPR 198
+P N F S +P A T S T P+ K + S P+ K PP+ + +
Sbjct: 836 LPENSLSFQGSKDSP---ATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVN 892
Query: 199 MDTPEDQDLPPCPEDIA----------KEKRTPAPEPEPCEASELPAKRLRSSEEPTEKE 248
+ P++ P P+ K + TPAP+ P S A ++ P+ K
Sbjct: 893 LPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG 952
Query: 249 PPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPS 308
P K P P + P A P P + S P
Sbjct: 953 GPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPP 1012
Query: 309 TDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEH 368
T PK A P+ A P + P PS P+
Sbjct: 1013 AVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS--PKGG 1070
Query: 369 PPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDA 414
P P T P + +P+ P G MPP A
Sbjct: 1071 PATPSLKGAP--------TPPAATPPSPKGGPATPSPKGAPMPPAA 1108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,470,244
Number of Sequences: 37866
Number of extensions: 2365462
Number of successful extensions: 45779
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 1081
Number of HSP's that attempted gapping in prelim test: 19657
Number of HSP's gapped (non-prelim): 13368
length of query: 818
length of database: 18,247,518
effective HSP length: 111
effective length of query: 707
effective length of database: 14,044,392
effective search space: 9929385144
effective search space used: 9929385144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.