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Search of human proteins with 196115153
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
(837 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ... 1698 0.0
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ... 1692 0.0
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ... 1662 0.0
gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1 [... 1662 0.0
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ... 1630 0.0
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 88 3e-17
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 83 9e-16
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 78 4e-14
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 77 9e-14
gi|56549696 E1A binding protein p400 [Homo sapiens] 71 4e-12
gi|38788274 bromodomain PHD finger transcription factor isoform ... 69 2e-11
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 67 7e-11
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 66 1e-10
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 66 1e-10
gi|38788260 bromodomain PHD finger transcription factor isoform ... 66 2e-10
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 65 2e-10
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 65 2e-10
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 65 2e-10
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 64 4e-10
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 64 6e-10
gi|110349719 titin isoform N2-A [Homo sapiens] 64 8e-10
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 63 1e-09
gi|197276594 RNA binding motif protein 20 [Homo sapiens] 63 1e-09
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 63 1e-09
gi|221139761 zinc finger protein 853 [Homo sapiens] 62 2e-09
gi|33286444 mastermind-like 2 [Homo sapiens] 62 3e-09
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 62 3e-09
gi|4507379 TATA box binding protein [Homo sapiens] 60 6e-09
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 60 6e-09
gi|110347429 mediator complex subunit 12 [Homo sapiens] 60 6e-09
>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
Length = 837
Score = 1698 bits (4398), Expect = 0.0
Identities = 837/837 (100%), Positives = 837/837 (100%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP
Sbjct: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
Query: 241 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 300
APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA
Sbjct: 241 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 300
Query: 301 QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL 360
QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL
Sbjct: 301 QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL 360
Query: 361 QQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV 420
QQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV
Sbjct: 361 QQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV 420
Query: 421 VVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGV 480
VVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGV
Sbjct: 421 VVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGV 480
Query: 481 WGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKAS 540
WGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKAS
Sbjct: 481 WGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKAS 540
Query: 541 CSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQL 600
CSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQL
Sbjct: 541 CSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQL 600
Query: 601 YYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEK 660
YYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEK
Sbjct: 601 YYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEK 660
Query: 661 EIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSET 720
EIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSET
Sbjct: 661 EIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSET 720
Query: 721 YSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTT 780
YSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTT
Sbjct: 721 YSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTT 780
Query: 781 RPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 837
RPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT
Sbjct: 781 RPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 837
>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
[Homo sapiens]
Length = 842
Score = 1692 bits (4382), Expect = 0.0
Identities = 837/842 (99%), Positives = 837/842 (99%), Gaps = 5/842 (0%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 181 PQKQARTSSSTTPNRK-----TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 235
PQKQARTSSSTTPNRK TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 240
Query: 236 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 295
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 241 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 300
Query: 296 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 355
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 301 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 360
Query: 356 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 415
VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP
Sbjct: 361 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 420
Query: 416 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 475
EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR
Sbjct: 421 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 480
Query: 476 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 535
EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY
Sbjct: 481 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 540
Query: 536 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 595
ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC
Sbjct: 541 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 600
Query: 596 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 655
NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL
Sbjct: 601 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 660
Query: 656 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 715
KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW
Sbjct: 661 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 720
Query: 716 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 775
KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN
Sbjct: 721 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 780
Query: 776 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 835
PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL
Sbjct: 781 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 840
Query: 836 KT 837
KT
Sbjct: 841 KT 842
>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 1662 bits (4304), Expect = 0.0
Identities = 837/898 (93%), Positives = 837/898 (93%), Gaps = 61/898 (6%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 181 PQKQARTSSSTTPNRK-----TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 235
PQKQARTSSSTTPNRK TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 240
Query: 236 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 295
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 241 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 300
Query: 296 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 355
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 301 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 360
Query: 356 VQPQLQQEAEPQ------------------------------------------------ 367
VQPQLQQEAEPQ
Sbjct: 361 VQPQLQQEAEPQKQVQPQVQPQAHSQGPRQVQLQQEAEPLKQVQPQVQPQAHSQPPRQVQ 420
Query: 368 ----KQVQ----PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 419
KQVQ PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP
Sbjct: 421 LQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 480
Query: 420 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 479
VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG
Sbjct: 481 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 540
Query: 480 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 539
VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA
Sbjct: 541 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 600
Query: 540 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 599
SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ
Sbjct: 601 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 660
Query: 600 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 659
LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE
Sbjct: 661 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 720
Query: 660 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 719
KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE
Sbjct: 721 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 780
Query: 720 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 779
TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT
Sbjct: 781 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 840
Query: 780 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 837
TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT
Sbjct: 841 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 898
>gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 1662 bits (4304), Expect = 0.0
Identities = 837/898 (93%), Positives = 837/898 (93%), Gaps = 61/898 (6%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
Query: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
Query: 181 PQKQARTSSSTTPNRK-----TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 235
PQKQARTSSSTTPNRK TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 181 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 240
Query: 236 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 295
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 241 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 300
Query: 296 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 355
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 301 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 360
Query: 356 VQPQLQQEAEPQ------------------------------------------------ 367
VQPQLQQEAEPQ
Sbjct: 361 VQPQLQQEAEPQKQVQPQVQPQAHSQGPRQVQLQQEAEPLKQVQPQVQPQAHSQPPRQVQ 420
Query: 368 ----KQVQ----PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 419
KQVQ PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP
Sbjct: 421 LQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP 480
Query: 420 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 479
VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG
Sbjct: 481 VVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG 540
Query: 480 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 539
VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA
Sbjct: 541 VWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA 600
Query: 540 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 599
SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ
Sbjct: 601 SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQ 660
Query: 600 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 659
LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE
Sbjct: 661 LYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLE 720
Query: 660 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 719
KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE
Sbjct: 721 KEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE 780
Query: 720 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 779
TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT
Sbjct: 781 TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPT 840
Query: 780 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 837
TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT
Sbjct: 841 TRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT 898
>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
Length = 818
Score = 1630 bits (4221), Expect = 0.0
Identities = 813/842 (96%), Positives = 813/842 (96%), Gaps = 29/842 (3%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP
Sbjct: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLG 120
PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG
Sbjct: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG------------------------ 96
Query: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
Sbjct: 97 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 156
Query: 181 PQKQARTSSSTTPNRK-----TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 235
PQKQARTSSSTTPNRK TMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK
Sbjct: 157 PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 216
Query: 236 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 295
EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP
Sbjct: 217 EKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP 276
Query: 296 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 355
EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ
Sbjct: 277 EALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 336
Query: 356 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 415
VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP
Sbjct: 337 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 396
Query: 416 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 475
EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR
Sbjct: 397 EQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAR 456
Query: 476 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 535
EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY
Sbjct: 457 EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCY 516
Query: 536 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 595
ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC
Sbjct: 517 ICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWC 576
Query: 596 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 655
NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL
Sbjct: 577 NTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKEL 636
Query: 656 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 715
KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW
Sbjct: 637 KSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEW 696
Query: 716 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 775
KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN
Sbjct: 697 KGSETYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKN 756
Query: 776 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 835
PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL
Sbjct: 757 PSPTTRPVSRRCAINARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRL 816
Query: 836 KT 837
KT
Sbjct: 817 KT 818
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 88.2 bits (217), Expect = 3e-17
Identities = 88/319 (27%), Positives = 129/319 (40%), Gaps = 46/319 (14%)
Query: 5 QQQQQLQQQQQQLQQL-------QQQQLQQQQLQQQQLLQLQQLLQQSP---PQAPLPMA 54
Q QQQ+QQQQQQLQ++ QQQQ QQQQ QQQQ LQ Q +QQ P PQ P A
Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQA 285
Query: 55 VSRGL----------PPQQPQQPLLNLQGTNSASLLNGSMLQRALL--LQQLQGLDQFAM 102
+ + L PP QPQQP + N S L + L+ Q L G +
Sbjct: 286 LPQQLQQMHHTQHHQPPPQPQQPPV---AQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ 342
Query: 103 PPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSL--- 159
PP + A + + + + A + Q+ P +Q + +
Sbjct: 343 PPLKFVRAPMVVQQPPVQP----QVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIR 398
Query: 160 -LGPPPVGVPMNPSQFNLSGRNPQKQARTS-----SSTTPNRKTMPVEDKSDPPEGSEEA 213
PP V PS GR P Q S SS +P ++ + PP+ S +
Sbjct: 399 ARFPPTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQP 458
Query: 214 AEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQ 273
+P + P P + P+P P+P + S + A+ ++ P+ PG L
Sbjct: 459 GQPSSQPNSNVSSGPAP---SPSSFLPSPSPQPSQ-SPVTARTPQNFSVPS----PGPLN 510
Query: 274 VKAQPQARMTVPKQTQTPD 292
P + M+ +Q +
Sbjct: 511 TPVNPSSVMSPAGSSQAEE 529
Score = 63.9 bits (154), Expect = 6e-10
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 241 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 300
AP ++ P +L+ + +++ Q Q + Q QA + +Q Q +A ++
Sbjct: 137 APHSMAVVSTATPQTQLQLQQVALQQQQQQQ-QFQQQQQAALQQQQQQQQQQQF-QAQQS 194
Query: 301 QVLPRFQPRVLQVQA-QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQ 359
+ +FQ V Q Q Q Q Q Q + Q Q ++Q+Q Q L LQQ+Q Q Q
Sbjct: 195 AMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQ 254
Query: 360 LQQEAEPQK-QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQT 418
QQ+ + Q Q QP + QP +Q + PP+Q Q +Q H H QP P+Q
Sbjct: 255 QQQQQQQQALQAQPPIQ---QPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQ---PQQP 308
Query: 419 PVVVHVCGLEMPPDA 433
PV + ++PP +
Sbjct: 309 PVAQNQPS-QLPPQS 322
Score = 53.9 bits (128), Expect = 6e-07
Identities = 67/267 (25%), Positives = 99/267 (37%), Gaps = 25/267 (9%)
Query: 152 PQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSE 211
P QSL G P G + + R P + S P+ PP G+
Sbjct: 81 PMNALQSLTGGPAAGA----AGIGMPPRGPGQSLGGMGSL--GAMGQPMSLSGQPPPGTS 134
Query: 212 EAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQ 271
A M P+ + ++ + + + + + ++ +++ Q
Sbjct: 135 GMAPHSMAVVSTAT----PQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQ 190
Query: 272 LQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQ 331
Q A Q V +Q Q L + + Q L + Q Q Q+Q Q Q Q
Sbjct: 191 AQQSAMQQQFQAVVQQQQ--QLQQQQQQQQHLIKLHH---QNQQQIQQQQQQLQRIAQLQ 245
Query: 332 VQPKLQKQAQTQTSPEHLVLQQKQVQ-PQLQQEAEPQKQVQPQV-----HTQ-AQPSVQP 384
+Q + Q+Q Q Q + + Q +Q P +QQ P Q PQ HTQ QP QP
Sbjct: 246 LQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQP 305
Query: 385 QEHPPAQVSVQPPEQTHEQPHTQPQVS 411
Q+ P AQ P Q Q TQP VS
Sbjct: 306 QQPPVAQ---NQPSQLPPQSQTQPLVS 329
Score = 42.4 bits (98), Expect = 0.002
Identities = 55/205 (26%), Positives = 78/205 (38%), Gaps = 27/205 (13%)
Query: 271 QLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQ-PRVLQVQAQVQSQTQPRIPSTD 329
QLQ + Q Q + + + + Q + + Q + Q Q Q Q Q Q + +
Sbjct: 209 QLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQP 268
Query: 330 TQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQV----------HTQAQ 379
QP +Q Q Q P + QQ Q Q P + QP V +Q Q
Sbjct: 269 PIQQPPMQ---QPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQ 325
Query: 380 PSV-QPQEHPPAQVSVQPP----------EQTHEQPHTQPQVSLLAPEQTPVVVHVCGLE 428
P V Q Q P + QPP +Q QP Q Q + + Q +V G++
Sbjct: 326 PLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMV-APGVQ 384
Query: 429 MPPDAVEAGGGMEKTLPEPVGTQVS 453
M +A+ A GGM P T VS
Sbjct: 385 MITEAL-AQGGMHIRARFPPTTAVS 408
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 83.2 bits (204), Expect = 9e-16
Identities = 143/495 (28%), Positives = 180/495 (36%), Gaps = 99/495 (20%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQL-QQQQLQQQQL--LQLQQLLQQSPPQAPLPMAVSRGLP 60
Q QQQQ QQQQQLQQ QQQQL QQQQLQQQQL Q QQ LQQ Q
Sbjct: 3899 QLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQ 3958
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPAT-------YDTAGLT 113
QQ QQ Q LLN S R LL Q Q Q A+ P + + G
Sbjct: 3959 QQQQQQQFQQQQQQQQMGLLNQS---RTLLSPQQQQQQQVALGPGMPAKPLQHFSSPGAL 4015
Query: 114 MPTATL----GNLRGYGMASPGLAAPS----------LTPPQLAT------PNLQ----- 148
PT L N ++S PS TP +AT P+L
Sbjct: 4016 GPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGEVKPSLSGDSQL 4075
Query: 149 ---QFFPQATRQSLLGPPPVGVPMNPSQ----FNLSGRNPQKQ----ARTSSSTTPNRKT 197
Q PQ SL PP+ +P Q + +G Q + + +S+ P+
Sbjct: 4076 LLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLA 4135
Query: 198 MPVEDKSDPPEGSEE----AAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELP 253
P D P + +P ++ P + P P P P P LP
Sbjct: 4136 QPSVSLGDQPGSMTQNLLGPQQPMLERPMQNNTGPQP---------PKPGPVLQSGQGLP 4186
Query: 254 AKRLRSSEEPTEKEPPGQLQ--VKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVL 311
+ PT + QLQ + PQ R P+Q Q Q+ R L
Sbjct: 4187 GVGIM----PTVGQLRAQLQGVLAKNPQLRHLSPQQQQ-----------QLQALLMQRQL 4231
Query: 312 QVQAQVQSQTQP-RIPSTDTQ-------VQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQE 363
Q Q+Q QT P + P T T QP+L QT P LQ+ P+ Q
Sbjct: 4232 Q-QSQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGP----LQELGAGPRPQ-- 4284
Query: 364 AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLA--PEQTPVV 421
P + P P + P P S Q P++ + P Q+ A P P
Sbjct: 4285 -GPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGT 4343
Query: 422 VHVCG--LEMPPDAV 434
G LE PP V
Sbjct: 4344 PKPQGPTLEPPPGRV 4358
Score = 71.6 bits (174), Expect = 3e-12
Identities = 107/444 (24%), Positives = 161/444 (36%), Gaps = 64/444 (14%)
Query: 4 QQQQQQLQQQQQQ----LQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAP-----LPMA 54
Q+Q Q+++QQ++ + + + +Q QQQQ QQQQ Q +L SP Q+P LP
Sbjct: 3575 QKQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKLPGQ 3634
Query: 55 VSRGLPPQQPQQP--------LLNLQGTNSASLLNGSMLQRALLLQQLQ----GLDQFAM 102
+ G Q PQ P L G G L AL QQ Q G A
Sbjct: 3635 LLPGHGLQPPQGPPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSLAG 3694
Query: 103 PPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQ----LATPNLQQFFPQATRQS 158
P + L LR G S L L Q LA QQ Q +Q
Sbjct: 3695 PSGGFFPGNLA--------LRSLGPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQH 3746
Query: 159 LLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRM 218
LLG + Q+Q + N+ P PP + ++
Sbjct: 3747 LLGQVAI----------------QQQQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQL 3790
Query: 219 DTPEDQD----LPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQV 274
Q L P + +++ A P+ P +++ ++ P Q
Sbjct: 3791 SPQPPQGPQGMLGPAQVAVLQQQHPGALGPQG------PHRQVLMTQSRVLSSPQLAQQG 3844
Query: 275 KAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQP 334
+ R+ +Q Q + L Q ++ Q + QP Q Q
Sbjct: 3845 QGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQ 3904
Query: 335 KLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSV 394
+LQ+Q Q Q + + QQ+Q+Q Q Q+ + Q+Q+Q Q Q Q Q+ Q
Sbjct: 3905 QLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQ-----QQQQQLQQQQ 3959
Query: 395 QPPEQTHEQPHTQPQVSLLAPEQT 418
Q +Q +Q Q Q+ LL +T
Sbjct: 3960 QQQQQQFQQQQQQQQMGLLNQSRT 3983
Score = 65.1 bits (157), Expect = 3e-10
Identities = 85/299 (28%), Positives = 118/299 (39%), Gaps = 40/299 (13%)
Query: 130 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSS 189
P L+PP +P P+A+R L PPP PM+P P + +R S
Sbjct: 601 PPFEESPLSPPPEESPLSPP--PEASR---LSPPPEDSPMSPPPEESPMSPPPEVSRLSP 655
Query: 190 STTPNRKTMPVEDK--SDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC 247
+R + P E+ S PPE S P PE L P PED +P PE
Sbjct: 656 LPVVSRLSPPPEESPLSPPPEES-----PTSPPPEASRLSPPPED-----SPTSPPPEDS 705
Query: 248 EASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQ 307
AS P L S P E+ P L + +PQ + +++ P L P E + PR +
Sbjct: 706 PASPPPEDSLMSL--PLEESP--LLPLPEEPQ----LCPRSEGPHLSPRPEEPHLSPRPE 757
Query: 308 PRVLQVQA-QVQSQTQPRIPS-TDTQVQPKLQKQAQ---TQTSPEHLVLQQKQVQPQLQQ 362
L QA + QP P +P L QA+ PE L L + +P L
Sbjct: 758 EPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSP 817
Query: 363 -EAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP-PEQTHEQPHTQPQVSLLAPEQTP 419
EP QP+ + + PQ P + P PE++H P + PE+ P
Sbjct: 818 VPEEPCLSPQPE-----ESHLSPQSEEPC---LSPRPEESHLSPELEKPPLSPRPEKPP 868
Score = 47.8 bits (112), Expect = 4e-05
Identities = 95/428 (22%), Positives = 160/428 (37%), Gaps = 68/428 (15%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
+ ++++LQ++QQ QLQ Q QQQQ QQ LL P QA
Sbjct: 3254 EHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLS-----APGPAQA-------------- 3294
Query: 64 PQQPLLNLQGTNSASLLNGSMLQRALLL--QQLQGLDQFAMP--PATYDTAGLTMPTATL 119
++L S+ L GS Q +L L + GL Q MP P + P+ +
Sbjct: 3295 -----MSLPHEGSSPSLAGSQQQLSLGLAGARQPGLPQPLMPTQPPAHALQQRLAPSMAM 3349
Query: 120 GNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGR 179
+ +G+ ++ L P Q + P L Q +G P + M P Q +
Sbjct: 3350 VSNQGHMLSGQHGGQAGLVPQQSSQPVLS--------QKPMGTMPPSMCMKPQQLAM--- 3398
Query: 180 NPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQ-DLPPCP------ED 232
Q+Q S + ED DP ++ A + Q + P
Sbjct: 3399 --QQQLANSFFPDTDLDKFAAEDIIDPIAKAKMVALKGIKKVMAQGSIGVAPGMNRQQVS 3456
Query: 233 IAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPD 292
+ ++ + P + + + RS+ +P++ P Q + Q Q +
Sbjct: 3457 LLAQRLSGGPSSDLQNHVAAGSGQERSAGDPSQPRP----NPPTFAQGVINEADQRQYEE 3512
Query: 293 LLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVL- 351
L Q L + Q +VL+ Q V +++ + + + ++ + LV
Sbjct: 3513 WL---FHTQQLLQMQLKVLEEQIGVHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTE 3569
Query: 352 QQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVS 411
QQ ++Q QL Q + QK+ HT E+ Q Q +Q +Q H+ V
Sbjct: 3570 QQSKIQKQLDQVRKQQKE-----HTNLM-----AEYRNKQQQQQQQQQQQQQQHS--AVL 3617
Query: 412 LLAPEQTP 419
L+P Q+P
Sbjct: 3618 ALSPSQSP 3625
Score = 47.4 bits (111), Expect = 6e-05
Identities = 72/299 (24%), Positives = 112/299 (37%), Gaps = 35/299 (11%)
Query: 137 LTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS-----SST 191
L+PP +P P+A+R L PPP +P +P L P +++ S S
Sbjct: 449 LSPPPEESPTSPP--PEASR---LSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPL 503
Query: 192 TPNRKTMPV----EDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC 247
+P ++ P E PPE E P ++TP P E+ +P PE
Sbjct: 504 SPPPESSPFSPLEESPLSPPE--ESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEEL 561
Query: 248 EASELP-AKRLR-SSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPR 305
S P A RL EE PP + + P+A P ++P L P E+ + P
Sbjct: 562 PTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESP-LSPPPEESPLSP- 619
Query: 306 FQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAE 365
S+ P P D+ + P +++ PE L V +L E
Sbjct: 620 ---------PPEASRLSP--PPEDSPMSPP-PEESPMSPPPEVSRLSPLPVVSRLSPPPE 667
Query: 366 PQKQVQPQVHTQAQPSVQPQE-HPPAQVS--VQPPEQTHEQPHTQPQVSLLAPEQTPVV 421
P + P + PP + S PPE + P + + L E++P++
Sbjct: 668 ESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLL 726
Score = 45.8 bits (107), Expect = 2e-04
Identities = 124/502 (24%), Positives = 163/502 (32%), Gaps = 90/502 (17%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPL---PMAVSRGL 59
+QQ Q + + QQ QQQQ QQQ L LQQ L Q L PM + L
Sbjct: 3841 AQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQL 3900
Query: 60 PPQQPQQPLLNLQGTNSASLLNGSMLQRALL--LQQLQGLDQFAMPPATYDTAGLTMPTA 117
QQ Q LQ L LQ+ L QQ Q L Q L
Sbjct: 3901 QQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQ 3960
Query: 118 TLGN--LRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFN 175
+ GL S T L +P QQ +Q LGP G+P P Q
Sbjct: 3961 QQQQQFQQQQQQQQMGLLNQSRT---LLSPQQQQ-----QQQVALGP---GMPAKPLQHF 4009
Query: 176 LSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK 235
S P T T + T+ DP SE P + PE +A
Sbjct: 4010 SS---PGALGPTLLLTGKEQNTV------DPAVSSEATEGPSTHQGGPLAIGTTPESMAT 4060
Query: 236 EKR---------------TPAPEPEPCEASELPAKRLRSSEEPTEK-------EPPGQLQ 273
E P P+P+P P RL ++ GQL
Sbjct: 4061 EPGEVKPSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLG 4120
Query: 274 VKAQPQARMTVPKQTQTPDL----LPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPS-- 327
+ +A +VP P + P ++ +L QP ++ +Q+ T P+ P
Sbjct: 4121 SGSSSEA-SSVPHLLAQPSVSLGDQPGSMTQNLLGPQQP---MLERPMQNNTGPQPPKPG 4176
Query: 328 ----------------TDTQVQPKLQKQAQTQTSPEHL-VLQQKQVQPQLQQEAEPQKQV 370
T Q++ +LQ HL QQ+Q+Q L Q Q Q
Sbjct: 4177 PVLQSGQGLPGVGIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQA 4236
Query: 371 QPQVHTQAQPSVQPQEHPPAQ--VSVQPPEQTHEQPHTQPQVSLLA---PEQTPVVVHVC 425
Q +P Q P Q + QP P T P L A P+ P
Sbjct: 4237 VRQTPPYQEPGTQTS---PLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPP------ 4287
Query: 426 GLEMPPDAVEAGGGMEKTLPEP 447
L PP A+ G + P P
Sbjct: 4288 RLPAPPGALSTGPVLGPVHPTP 4309
Score = 42.7 bits (99), Expect = 0.001
Identities = 76/363 (20%), Positives = 116/363 (31%), Gaps = 70/363 (19%)
Query: 103 PPATYDTAGLTMPTATLG---NLRGY---------GMASPG---LAAPSLTPPQLATPN- 146
PPA T + PT G + G+ G SPG L P P Q+ + +
Sbjct: 2117 PPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVPAQVPSQDP 2176
Query: 147 --------LQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPN---- 194
L+ FP A P P G P P S R Q +T P
Sbjct: 2177 FGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRH 2236
Query: 195 ---------RKTMPVEDKSDPPE----GSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPA 241
+ P D PE G +A+EP + P + E +E +
Sbjct: 2237 QPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASS 2296
Query: 242 PE---------PEPCEASELPAKRLRSSE----------EPTEKEPPGQ-LQVKAQPQAR 281
P P + L L++ + E + PG L+ + P A+
Sbjct: 2297 PSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQ 2356
Query: 282 MTVPKQTQTPDLLPEA------LEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 335
P PD+ + + PR QP + + ++ P P + P+
Sbjct: 2357 ALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQ 2416
Query: 336 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQ 395
Q +Q+ +P L + P + P +P Q++ P PP Q
Sbjct: 2417 SQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRP---Q 2473
Query: 396 PPE 398
PPE
Sbjct: 2474 PPE 2476
Score = 37.7 bits (86), Expect = 0.045
Identities = 78/375 (20%), Positives = 122/375 (32%), Gaps = 56/375 (14%)
Query: 129 SPGLAAPSLTP----PQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFN--LSGRNPQ 182
SP P L+P P L+ + + + L P P ++P LS R P+
Sbjct: 807 SPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPR-PE 865
Query: 183 KQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDI---AKEKRT 239
K P + +P+ P S EP + P + L P PE++ + +
Sbjct: 866 KPPEEPGQC-PAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPS 924
Query: 240 PAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQV------KAQPQARMTVPKQTQTPDL 293
+P+ P + P + ++ P P G+L+ + P++ + P
Sbjct: 925 LSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAP-------- 976
Query: 294 LPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSP--EHLVL 351
LE + P + + P S P L + Q SP +H ++
Sbjct: 977 ---ILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLV 1033
Query: 352 QQKQVQPQLQQEAEPQKQVQP--------------QVHTQAQPSVQPQEHPPAQVSVQPP 397
Q Q A P P ++H V E P + P
Sbjct: 1034 PQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALE-----P 1088
Query: 398 EQTHEQPHTQPQVSLLAPEQTPVVVHVCGL---EMPPDAVEAGGGMEKTLPEPVGTQVSM 454
T P +S AP P + GL P D ++A G PEP T S+
Sbjct: 1089 SATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQ----PEPGQTPGSL 1144
Query: 455 EEIQNESACGLDVGE 469
S LD E
Sbjct: 1145 ASELKGSPVLLDPEE 1159
Score = 37.4 bits (85), Expect = 0.058
Identities = 72/350 (20%), Positives = 121/350 (34%), Gaps = 50/350 (14%)
Query: 199 PVEDKSDPPEGSEEAAEPRMDTPEDQDLP----------PCPEDIAKEKRTPAPEPEPCE 248
P+ + PP ++ A+EPR+ + + P PC IA K PAP
Sbjct: 3093 PLGPEERPPPAAD-ASEPRLASVLPEVKPKVEEGGRHPSPCQFTIATPKVEPAPAANSLG 3151
Query: 249 ASELPAKRLRSSEEPTEKEPP----GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLP 304
P + + S + P G KA A P TP L + +L
Sbjct: 3152 LGLKPGQSMMGSRDTRMGTGPFSSSGHTAEKASFGATGGPPAHLLTPSPLSGPGGSSLLE 3211
Query: 305 RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEA 364
+F+ + + T P P+ K++ P L + + ++E
Sbjct: 3212 KFE-------LESGALTLPGGPAASGDELDKMESSLVASELP----LLIEDLLEHEKKEL 3260
Query: 365 EPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHV 424
+ ++Q+ Q+ Q Q Q+H + +S P Q PH SL +Q
Sbjct: 3261 QKKQQLSAQLQPAQQQQQQQQQH--SLLSAPGPAQAMSLPHEGSSPSLAGSQQQL----- 3313
Query: 425 CGLEMPPDAVEAGGGMEKTLPEP-VGTQVSMEEIQNESACGLDVGECENRAREMPGVWGA 483
++ G + LP+P + TQ +Q A + + N+ + G G
Sbjct: 3314 --------SLGLAGARQPGLPQPLMPTQPPAHALQQRLAPSMAM--VSNQGHMLSGQHGG 3363
Query: 484 GGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFF 533
L + Q S S P+ +P S+ P + + A FF
Sbjct: 3364 QAGL---VPQQSSQPVLSQKPMGTMP---PSMCMKPQQLAMQQQLANSFF 3407
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 77.8 bits (190), Expect = 4e-14
Identities = 123/474 (25%), Positives = 181/474 (38%), Gaps = 65/474 (13%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQ--SPPQAPLP----MAVSR 57
QQQQQQ QQQQQQ QQ QQQQLQ + QQ Q Q Q + Q +P Q P+P S
Sbjct: 265 QQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSG 324
Query: 58 GLPPQQPQQPLLNL---QGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTM 114
L P Q L + QG A L G M Q+ L + + PP Y
Sbjct: 325 ALQPPPAQGSLGTMTANQGWKKAP-LPGPMQQQLQARPSLATVQTPSHPPPPYPFGS--- 380
Query: 115 PTATLGNLRGYGMASPG----------LAAPSLTPPQLATPNLQQFFPQATRQSLLGPPP 164
A+ + M++PG PS P L P+L P ++ S P
Sbjct: 381 QQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSP 440
Query: 165 VGVP-MNPSQFNLSGR----NPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMD 219
P +N +Q + R NP Q ++P R M V+ + PP +P
Sbjct: 441 ASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPM-VQQGNVPPNFMVMQQQPPNQ 499
Query: 220 TPED---------QDLPP-------CPEDI-AKEKRTPAPEPEPCEASELPA-KRLRSSE 261
P+ + LPP P + + T A P A +L A + ++ +
Sbjct: 500 GPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAG 559
Query: 262 EPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQT 321
P Q+QV P M ++ + +P Q + +Q Q Q
Sbjct: 560 GQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVP--QVNLSNMQGQPQQGP 617
Query: 322 QPRIPSTDTQVQPKLQKQAQTQ--TSPEH-LVLQQKQVQPQLQQEAEPQKQVQPQVHTQA 378
++ Q+ P + Q Q +P++ ++L + Q+ PQ Q P Q
Sbjct: 618 PSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQ-------NL 670
Query: 379 QPSVQPQEHPPAQVSVQPPEQTHEQPHTQ---PQVSLLAPEQTPVVVHVCGLEM 429
PS Q P +S Q P+ PH Q PQ +L +Q P++ + +M
Sbjct: 671 GPSPQRMTPPKQMLSQQGPQMM--APHNQMMGPQGQVLL-QQNPMIEQIMTNQM 721
Score = 47.0 bits (110), Expect = 7e-05
Identities = 99/444 (22%), Positives = 163/444 (36%), Gaps = 45/444 (10%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLL-QLQQLLQQSPPQ-----APLPMA 54
M SQQ Q + Q + Q LQQ + +Q + Q+Q QQ Q P P
Sbjct: 683 MLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQ 742
Query: 55 VSRGLPPQQPQQPLLNLQGTNSASLL--NGSMLQRALLLQQLQGLDQFAMPPATYDTAGL 112
+ RG P Q ++ G S +L G + + +QG P+ +
Sbjct: 743 IMRGPTPNM-QGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQH 801
Query: 113 TMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQS-------LLGPPPV 165
P T N P + S+ + P++Q + + P
Sbjct: 802 GDPATTANNDVSLSQMMPDV---SIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFS 858
Query: 166 GVPMNPSQFNLSGRNPQKQARTSSS-TTPNRKTMPVEDKSDPPEG-SEEAAEPRMDTPED 223
G P N +Q + G+NP + T+P + D S G + + + P+
Sbjct: 859 GAP-NGNQMSC-GQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKK 916
Query: 224 QDLPPCPEDIAKEKRTPAPEPEPCEASE---LPAKRLRSSEEPTEKEPPGQLQVKAQPQA 280
+ P ++ ++ TP P E ++ LP ++ + + K P + +P
Sbjct: 917 KKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLP----EFSNRPPG 972
Query: 281 RMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQA 340
+ P + + +P L V P QP Q Q Q+ Q QP PS QP+ Q+Q
Sbjct: 973 YPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPS-----QPQSQQQQ 1027
Query: 341 QTQTSPEHLVLQQKQVQ----PQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP 396
Q Q +++ Q+ + P Q P+ + P +Q P +Q P VS+Q
Sbjct: 1028 QQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPD--SQRMP-MQQSGSVPVMVSLQG 1084
Query: 397 PEQTHEQPHTQPQVSLLAPEQTPV 420
P P Q + P TP+
Sbjct: 1085 PASVPPSPDKQ---RMPMPVNTPL 1105
Score = 46.2 bits (108), Expect = 1e-04
Identities = 75/289 (25%), Positives = 111/289 (38%), Gaps = 35/289 (12%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGL-PPQ 62
QQ Q QL QQQQ Q Q QQQQ QQQ ++ L ++QQ P LP VS+ + PP+
Sbjct: 1003 QQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMML--MMQQDPKSVRLP--VSQNVHPPR 1058
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTAT-LGN 121
P LN +GS+ ++ LQG A P + D + MP T LG+
Sbjct: 1059 GP----LNPDSQRMPMQQSGSV----PVMVSLQGP---ASVPPSPDKQRMPMPVNTPLGS 1107
Query: 122 LRGYGMASPGLAAPSLTP-PQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
+ PS +P ++A+ P+A+ P G P N + +N
Sbjct: 1108 NSRKMVYQESPQNPSSSPLAEMAS------LPEASGSE--APSVPGGPNNMPSHVVLPQN 1159
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAE----PRMDTPEDQDLPPCPEDIAKE 236
+P T + PP S ++ P + P P P +
Sbjct: 1160 QLMMTGPKPGPSPLSATQGATPQ-QPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPR 1218
Query: 237 ---KRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARM 282
+TP P E SE+ R + PP Q+ + P+ +
Sbjct: 1219 PYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPP-QINIPLPPRPNL 1266
Score = 42.0 bits (97), Expect = 0.002
Identities = 51/208 (24%), Positives = 78/208 (37%), Gaps = 47/208 (22%)
Query: 217 RMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPG-QLQVK 275
RM+ P +PP +++ P P PE + PA S + + G +Q +
Sbjct: 175 RMNNPATVMIPP-GGNVSSSMMAPGPNPELQPRTPRPA----SQSDAMDPLLSGLHIQQQ 229
Query: 276 AQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 335
+ P + P P + V Q+ P+ Q+Q +
Sbjct: 230 SHPSGSLAPPHHPMQP-------------------VSVNRQMN-------PANFPQLQQQ 263
Query: 336 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP-SVQPQEHPPAQVSV 394
Q+Q Q Q QQ+Q Q Q QQ+ + Q + PQ H Q QP ++PQ P QV V
Sbjct: 264 QQQQQQQQ--------QQQQQQQQQQQQQQLQAR-PPQQHQQQQPQGIRPQFTAPTQVPV 314
Query: 395 QP-----PEQTHEQPHTQPQVSLLAPEQ 417
P P + P Q + + Q
Sbjct: 315 PPGWNQLPSGALQPPPAQGSLGTMTANQ 342
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 76.6 bits (187), Expect = 9e-14
Identities = 89/304 (29%), Positives = 119/304 (39%), Gaps = 56/304 (18%)
Query: 5 QQQQQLQQQQQQLQ---QLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
Q QQQ+QQQQQQLQ QLQ QQ QQQQ QQQQ Q QQ LQ PP PM
Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQ--QQQQALQAQPPIQQPPM-------- 275
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGN 121
QQPQ P S LQ+ Q Q Q PP + P +
Sbjct: 276 QQPQPP---------PSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQP 326
Query: 122 LRGYGMASPG-----------LAAPSLT--PPQLATPNLQQFFPQATRQSLLGPPPVGVP 168
L A PG + AP + PP QQ Q + + + P V V
Sbjct: 327 LVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQVS 386
Query: 169 MNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPP 228
+ S LS +P +Q +T S P PP+ S + +P + P
Sbjct: 387 QS-SLPMLSSPSPGQQVQTPQSMPP------------PPQPSPQPGQPSSQPNSNVSSGP 433
Query: 229 CPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQT 288
P + P+P P+P + S + A+ ++ P+ PG L P + M+ +
Sbjct: 434 AP---SPSSFLPSPSPQPSQ-SPVTARTPQNFSVPS----PGPLNTPVNPSSVMSPAGSS 485
Query: 289 QTPD 292
Q +
Sbjct: 486 QAEE 489
Score = 69.3 bits (168), Expect = 1e-11
Identities = 91/335 (27%), Positives = 122/335 (36%), Gaps = 31/335 (9%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQ---------LLQLQQLLQQSPPQAP--LP 52
QQQQQQ QQQQQ Q QQQQ QQQQ Q QQ ++Q QQ LQQ Q +
Sbjct: 163 QQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIK 222
Query: 53 MAVSRGLPPQQPQQPL-----LNLQGTNSASLLNGSMLQRALLLQ---QLQGLDQFAMPP 104
+ QQ QQ L L LQ Q+AL Q Q + Q PP
Sbjct: 223 LHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPP 282
Query: 105 ATYDTAGLTMPTATLGNLRGYGMASPGLA--APSLTPPQLATPNLQQFFPQATRQSLLGP 162
+ L T + P +A PS PPQ T L Q L
Sbjct: 283 SQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ 342
Query: 163 PPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVE----DKSDPPEGSEEAAEPRM 218
PP+ P PQ Q + ++ T M +S P S + ++
Sbjct: 343 PPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQV 402
Query: 219 DTPEDQDLPPCP-----EDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQ 273
TP+ PP P + ++ + P P +S LP+ + S+ P P
Sbjct: 403 QTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFS 462
Query: 274 VKAQPQARMTV-PKQTQTPDLLPEALEAQVLPRFQ 307
V + V P +P +A E Q L + +
Sbjct: 463 VPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLK 497
Score = 64.7 bits (156), Expect = 3e-10
Identities = 88/333 (26%), Positives = 135/333 (40%), Gaps = 61/333 (18%)
Query: 241 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 300
AP ++ P +L+ + +++ Q Q + Q QA + +Q Q +A ++
Sbjct: 137 APHSMAVVSTATPQTQLQLQQVALQQQQQQQ-QFQQQQQAALQQQQQQQQQQQF-QAQQS 194
Query: 301 QVLPRFQPRVLQVQA-QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQ 359
+ +FQ V Q Q Q Q Q Q + Q Q ++Q+Q Q L LQQ+Q Q Q
Sbjct: 195 AMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQ 254
Query: 360 LQQEAEPQK-QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQT 418
QQ+ + Q Q QP + QP +Q + PP+Q Q +Q H H QP P+Q
Sbjct: 255 QQQQQQQQALQAQPPIQ---QPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQ---PQQP 308
Query: 419 PVVVHVCGLEMPP---------DAVEAGGGMEKTLP-------------EPVGTQVSMEE 456
PV + ++PP A G M T P PV QV ++
Sbjct: 309 PVAQNQPS-QLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQ 367
Query: 457 IQNESACGLDVGECENRAREM--PGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPS-- 512
++A +A +M PGV + SL + S + + + P P+PS
Sbjct: 368 TAVQTA----------QAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQ 417
Query: 513 ---------DSVSSTPAAT-----STPSKQALQ 531
+VSS PA + +PS Q Q
Sbjct: 418 PGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQ 450
Score = 31.6 bits (70), Expect = 3.2
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 326 PSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQE---------AEPQKQVQPQVHT 376
P + + P T T L LQQ +Q Q QQ+ + Q+Q Q Q
Sbjct: 130 PPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQF 189
Query: 377 QAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQ 407
QAQ S Q+ Q VQ +Q +Q Q
Sbjct: 190 QAQQSAMQQQF---QAVVQQQQQLQQQQQQQ 217
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 71.2 bits (173), Expect = 4e-12
Identities = 119/447 (26%), Positives = 161/447 (36%), Gaps = 76/447 (17%)
Query: 8 QQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQP 67
Q L+QQQQQ QQ QQQQ QQQQ QQQQ Q QQ S Q Q P
Sbjct: 2715 QLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTS-----------------QVQVP 2757
Query: 68 LLNLQGTNSASL-LNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGNLRGYG 126
+ Q + A + G + L+ Q Q L PP + PTA
Sbjct: 2758 QIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQ-------- 2809
Query: 127 MASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLS----GRNPQ 182
+ + PPQ +P L ++ P P + + NL R P
Sbjct: 2810 -----VQVQTSQPPQQQSPQL---------TTVTAPRPGALLTGTTVANLQVARLTRVPT 2855
Query: 183 KQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAP 242
Q + + PP S AA + +P LP I+ P
Sbjct: 2856 SQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAV--VSSPGVTTLPMNVAGISVAIGQPQK 2913
Query: 243 E------PEPCEASEL-----PAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTP 291
+P +L A + + + +P + P +Q K Q T Q +
Sbjct: 2914 AAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVA 2973
Query: 292 DLLPEALEAQVL--PRFQPRVL----QVQAQVQSQTQPRIPSTDTQVQPKLQ-KQAQTQT 344
AL+ Q L P Q + L QVQ Q+Q P++ T V Q A Q
Sbjct: 2974 YAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQA 3033
Query: 345 SPEHLVL-------QQKQVQPQLQQEAE--PQKQVQPQVHTQAQPSVQPQEHP-PAQV-- 392
SP+ + L QQ Q+ P + A+ QK +Q QV T A +Q P PAQV
Sbjct: 3034 SPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPA 3093
Query: 393 SVQPPEQTHEQPHTQPQVSLLAPEQTP 419
S P Q + P V L P + P
Sbjct: 3094 SSDSPSQQPKLQMRVPAVRLKTPTKPP 3120
Score = 64.7 bits (156), Expect = 3e-10
Identities = 105/454 (23%), Positives = 154/454 (33%), Gaps = 80/454 (17%)
Query: 16 QLQQLQQQQLQQQQ--LQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQG 73
Q+ L+ +++ +++ L QQ Q + Q PPQ P PPQQP PL Q
Sbjct: 2476 QVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPP------PPQQPPPPLPQPQA 2529
Query: 74 TNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGNLRGYGMASPGLA 133
GS Q Q Q P P T G G G
Sbjct: 2530 A-------GSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTG---GSAAVLAGTI 2579
Query: 134 APSLTPPQLAT--------PNLQQFFPQATRQSL-------LGPPPVGVPMNPSQFNLSG 178
S+T + T N P AT QS+ + P + P + +
Sbjct: 2580 KTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVH 2639
Query: 179 RNPQKQARTSSST-TPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK 237
P +A S +T TP+ +M +G +L P +
Sbjct: 2640 TQPPPRAVGSPATATPDLVSMAT------TQGVRAVTSVTASAVVTTNLTP----VQTPA 2689
Query: 238 RTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEA 297
R+ P+ +LP K + P Q+ Q Q + +Q Q
Sbjct: 2690 RSLVPQVSQATGVQLPGKTI----------TPAHFQLLRQQQQQQQQQQQQQ-------- 2731
Query: 298 LEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQ 357
Q + Q + Q Q Q + +Q ++P Q Q Q +A + +PEHL+ QKQ
Sbjct: 2732 ---QQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKL 2788
Query: 358 PQLQQEAEPQKQ---VQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLA 414
Q PQ Q QP Q Q S PQ+ P +V T P+ L
Sbjct: 2789 QMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTV-----------TAPRPGALL 2837
Query: 415 PEQTPVVVHVCGL-EMPPDAVEAGGGMEKTLPEP 447
T + V L +P ++A G M+ P+P
Sbjct: 2838 TGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQP 2871
Score = 38.9 bits (89), Expect = 0.020
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 28/120 (23%)
Query: 223 DQDLPPCP------EDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKA 276
D+ LPP E IAKEK+ A + + +++P +PP
Sbjct: 2469 DKPLPPIQVASLRAERIAKEKKALADQ--------------QKAQQPAVAQPP------- 2507
Query: 277 QPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKL 336
PQ + P Q Q P LP+ A P P +Q Q Q Q QTQP+ + QP +
Sbjct: 2508 PPQPQPPPPPQ-QPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAI 2566
Score = 34.3 bits (77), Expect = 0.49
Identities = 64/313 (20%), Positives = 102/313 (32%), Gaps = 51/313 (16%)
Query: 291 PDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLV 350
P + +L A+ + + + + L Q + Q + P Q P Q+ P+
Sbjct: 2473 PPIQVASLRAERIAK-EKKALADQQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAG 2531
Query: 351 LQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQV 410
Q P +Q + +PQ Q QPQ VQ P + T
Sbjct: 2532 SQPPAGPPAVQPQPQPQPQTQPQ-------------------PVQAPAKAQPAITTGGSA 2572
Query: 411 SLLAPEQTPVVVHVCGLEMPPDAVEAG--------------GGMEKTLPEPVGTQV---- 452
++LA + V G MP AV + K L PV
Sbjct: 2573 AVLA---GTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTP 2629
Query: 453 ---SMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVP 509
+ ++ + VG ++ + G VT + +S A T LTPV
Sbjct: 2630 GGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTAS---AVVTTNLTPVQ 2686
Query: 510 RPSDSV---SSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHM 566
P+ S+ S P K + + QQ+ Q + Q QQ+ + Q
Sbjct: 2687 TPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQ-QQQQQQQQQQQQQQQQQQQQQQQQQ 2745
Query: 567 SQACLLSLLPVPR 579
Q S + VP+
Sbjct: 2746 QQTTTTSQVQVPQ 2758
Score = 33.9 bits (76), Expect = 0.64
Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 17/183 (9%)
Query: 17 LQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP--PQQPQQPLLNLQGT 74
LQ QQ Q+ + Q Q Q ++ QQ P P+P S LP P QP Q L++ T
Sbjct: 574 LQFAQQPQVVEAQTQLQIPVKTQQ------PNVPIPAPPSSQLPIPPSQPAQLALHVP-T 626
Query: 75 NSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGL-TMPTATLGNLRGYGMA-SPGL 132
+ S L L Q+ + + PA L T T++L + G G SP
Sbjct: 627 PGKVQVQASQLSS---LPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPAR 683
Query: 133 AAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTT 192
++P P L P +R + P +P+Q S ++ + T T
Sbjct: 684 SSPVNRPSSATNKALS---PVTSRTPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQITL 740
Query: 193 PNR 195
N+
Sbjct: 741 ENQ 743
Score = 32.3 bits (72), Expect = 1.9
Identities = 76/291 (26%), Positives = 102/291 (35%), Gaps = 59/291 (20%)
Query: 308 PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHL--------VLQQKQVQPQ 359
P+ Q+ Q QSQ Q PST VQ P L L Q
Sbjct: 520 PQAAQLAGQRQSQQQYD-PSTGPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQ 578
Query: 360 LQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHE---QPHTQPQVSLLAPE 416
Q E Q Q+Q V TQ QP+V P PP+ PP Q + T +V + A +
Sbjct: 579 QPQVVEAQTQLQIPVKTQ-QPNV-PIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQ 636
Query: 417 QTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRARE 476
+ + V +P D P P+ T S + S G
Sbjct: 637 LSSLPQMVASTRLPVDPA-------PPCPRPLPTS-STSSLAPVSGSG------------ 676
Query: 477 MPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYI 536
PG A S V S+ ++A S V R V+S P +P++ A
Sbjct: 677 -PGPSPARSS-PVNRPSSATNKALSPV----TSRTPGVVASAPTKPQSPAQNA------- 723
Query: 537 CKASCSSQQEFQDHMSEP-----QHQQRLGEIQH---MSQACLLSLLPVPR 579
SSQ QD ++E Q QR+ E++ SQ L L PR
Sbjct: 724 ----TSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPR 770
Score = 31.6 bits (70), Expect = 3.2
Identities = 46/180 (25%), Positives = 64/180 (35%), Gaps = 35/180 (19%)
Query: 125 YGMASPG--LAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPV------------GVPMN 170
YG G +A PS PP+ A P PQ L G PP+ P
Sbjct: 1432 YGQKPEGRTVAFPSTHPPRTAAPTTASAAPQG---PLRGRPPIATFSANPEAKAAAAPFQ 1488
Query: 171 PSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCP 230
SQ + S P+ Q ++SST + P + + +A+ P P+ P P
Sbjct: 1489 TSQASASA--PRHQPASASSTAAS----PAHPAKLRAQTTAQASTPGQPPPQ----PQAP 1538
Query: 231 EDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQT 290
A + P P +A RL S E QL PQ+R+ P+ T
Sbjct: 1539 SHAAGQSALPQRLVLPSQAQ----ARLPSG----EVVKIAQLASITGPQSRVAQPETPVT 1590
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 68.9 bits (167), Expect = 2e-11
Identities = 81/312 (25%), Positives = 123/312 (39%), Gaps = 62/312 (19%)
Query: 153 QATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQAR--------TSSSTTPNRKTMPVEDKS 204
Q T Q L P V V P Q + P + T+++T T +
Sbjct: 2174 QTTGQLQLIPQGVTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAA 2233
Query: 205 DPPEGSEEAAEPRMDTPEDQDLPPC------PEDIAKEKRTPAPEPEPCEASELPAK--- 255
E + P+M +D+ LPP P + + P+ +P+P + PA+
Sbjct: 2234 GTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEV 2293
Query: 256 ---------RLRSSEEPTEKEPPG------QLQVKAQPQA--------RMTVPKQTQ--- 289
SS P+E +P Q+ ++QPQ+ R+ P QT+
Sbjct: 2294 QTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRP 2353
Query: 290 -TPDLLPEALEAQVLPR------FQPRV-LQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQ 341
TP L ++QV QP LQ+ +Q Q Q+QP++ S+ +
Sbjct: 2354 STPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQV 2413
Query: 342 TQTSPEHLVLQQKQVQ------PQLQQEAEPQKQVQPQV--HTQAQPSVQPQE---HPPA 390
T +SP LQ +Q Q PQLQQ+ + Q+Q QV QAQ S PQ+ P
Sbjct: 2414 TVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPI 2473
Query: 391 QVSVQPPEQTHE 402
Q+ QTH+
Sbjct: 2474 QIQQSSAVQTHQ 2485
Score = 65.9 bits (159), Expect = 2e-10
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 277 QPQARMTVPKQTQTPDLLPEALEAQVLP-RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 335
Q Q++++ Q LP A + V P QP+ Q AQ Q QTQP+ P+ QP+
Sbjct: 2238 QRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPA-----QPE 2292
Query: 336 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ--KQVQPQVHTQAQPSVQPQEHPPAQVS 393
+Q Q + QT + QP Q ++PQ Q QPQ + Q Q V+ Q P+Q
Sbjct: 2293 VQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQS--PSQTR 2350
Query: 394 VQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMP 430
++P + P Q QV + P+ H L++P
Sbjct: 2351 IRPSTPSQLSPGQQSQVQTTTSQPIPIQPHT-SLQIP 2386
Score = 59.3 bits (142), Expect = 1e-08
Identities = 103/439 (23%), Positives = 177/439 (40%), Gaps = 55/439 (12%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQ 62
S Q + QQ Q +L Q QL Q Q L + Q Q+ Q L LP
Sbjct: 2133 SASQPPRPQQGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTVLPG- 2191
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGNL 122
P Q L+ A++ NG++ QR L P AT T T T
Sbjct: 2192 -PGQQLMQ------AAMPNGTV-QRFLFT-----------PLATTATTASTTTTTVSTTA 2232
Query: 123 RGYGMASPGLAAP--------SLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQF 174
G G +P +L P Q ++ + PQ T Q P P P +P+Q
Sbjct: 2233 AGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQ-TAQPSAQPQPQTQPQSPAQP 2291
Query: 175 NLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEA---------AEPRMDTPEDQD 225
+ + P+ Q +T+ S+ + P +S P+ + ++ + R+ +P
Sbjct: 2292 EVQTQ-PEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTR 2350
Query: 226 L-PPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTV 284
+ P P ++ +++ + + + +P + S + P++ +P Q QV++ Q +
Sbjct: 2351 IRPSTPSQLSPGQQS---QVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSG 2407
Query: 285 PKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQT 344
Q P + Q+ + QP+V+ V Q+Q Q Q +Q+Q ++ Q Q Q
Sbjct: 2408 QTLNQVTVSSPSRPQLQI-QQPQPQVIAVP-QLQQQVQVL-----SQIQSQVVAQIQAQQ 2460
Query: 345 S--PEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHE 402
S P+ + LQ + Q+QQ + Q V T SVQ Q Q+ Q ++ +
Sbjct: 2461 SGVPQQIKLQ---LPIQIQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQ 2517
Query: 403 QPHTQPQVSLLAPEQTPVV 421
Q + + +L A Q+ ++
Sbjct: 2518 QIEIKREHTLQASNQSEII 2536
Score = 31.6 bits (70), Expect = 3.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
Query: 648 HKDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEE 700
+ D E + E+++ ++E+ +GD EE +D ED+EE E+EE+
Sbjct: 126 YDDHESEEEEEEEDMVSEEEEEE---------DGDAEETQDSEDDEEDEMEED 169
Score = 30.0 bits (66), Expect = 9.3
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 227 PPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPK 286
P P A E+ PAP P P + P LRS + + Q + P+ R++ P+
Sbjct: 9 PKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPR 68
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 67.0 bits (162), Expect = 7e-11
Identities = 122/471 (25%), Positives = 165/471 (35%), Gaps = 88/471 (18%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
Q QQ+ QQQ LQ LQQQ L QL L + Q S + Q P
Sbjct: 73 QYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVSNRQGSTSGSNVSAQAP 132
Query: 65 QQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGNLRG 124
Q S+S+ + A LL + Q ++ A +G+ LGN
Sbjct: 133 AQ---------SSSINLAASPAAAQLLNRAQSVNSAA-------ASGIAQQAVLLGN--- 173
Query: 125 YGMASPGLAAPSLTPPQLATPNLQQFFPQ---ATRQSLLGPPPVGVPMNPSQF-NLSGRN 180
+SP L A + F P AT Q LG P P+Q NL+ R
Sbjct: 174 --TSSPALTASQ--AQMYLRAQMLIFTPTATVATVQPELGTGSPARPPTPAQVQNLTLRT 229
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
Q A +S TP + +P P GS Q LP TP
Sbjct: 230 QQTPAAAASGPTPTQPVLPSLALKPTPGGS-------------QPLP-----------TP 265
Query: 241 APEPEPCEASELPAK-RLRSSEEPTEKEPPGQLQVKAQPQAR----MTVPKQTQTPDLLP 295
A +AS AK + S K+ G V + R TVP P + P
Sbjct: 266 AQSRNTAQASPAGAKPGIADSVMEPHKKGDGNSSVPGSMEGRAGLSRTVPAVAAHPLIAP 325
Query: 296 EALEA---QVLPRFQPRVLQVQAQVQSQTQPRIPS-TDTQVQPKLQKQAQTQTSPEHLVL 351
+ Q+LP+ + LQ Q +Q Q QP+ Q +P LQ + Q + V
Sbjct: 326 AYAQLQPHQLLPQPSSKHLQPQFVIQQQPQPQQQQPPPQQSRPVLQAEPHPQLAS---VS 382
Query: 352 QQKQVQPQLQQEAEPQKQVQPQVHTQA------QPSVQPQEHPPAQVSVQPPEQTHEQ-- 403
+QP + A P V P + Q +P Q HPP + P+ H +
Sbjct: 383 PSVALQPSSEAHAMPLGPVTPALPLQCPTANLHKPGGSQQCHPPTPDT--GPQNGHPEGV 440
Query: 404 --------PHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPE 446
HT + L P P C +P D E G EK++PE
Sbjct: 441 PHTPQRRFQHTSAVILQLQPASPP---QQC---VPDDWKEVAPG-EKSVPE 484
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 66.2 bits (160), Expect = 1e-10
Identities = 71/255 (27%), Positives = 90/255 (35%), Gaps = 28/255 (10%)
Query: 161 GPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDT 220
GPPP+ P P P + PN MP PP G P
Sbjct: 42 GPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMP 101
Query: 221 PEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQA 280
P +PP P + P P A PA K P G++ A
Sbjct: 102 PPMSSMPPPPGMMFP------PGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYY---NA 152
Query: 281 RMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQA 340
R T+ PD + ++++ P +L QAQVQ+Q Q + Q Q + Q QA
Sbjct: 153 RTRESAWTK-PDGVKVIQQSELTP-----MLAAQAQVQAQAQAQ-----AQAQAQAQAQA 201
Query: 341 QTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQT 400
Q Q Q Q Q Q Q +A+ Q Q Q Q QAQ Q Q Q VQ Q
Sbjct: 202 QAQA--------QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQA 253
Query: 401 HEQPHTQPQVSLLAP 415
+ P S AP
Sbjct: 254 QAVGASTPTTSSPAP 268
Score = 54.7 bits (130), Expect = 4e-07
Identities = 75/345 (21%), Positives = 122/345 (35%), Gaps = 43/345 (12%)
Query: 130 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSS 189
P + P PP + P+LQ R + PP +P P G P T +
Sbjct: 77 PPMPPPGGIPPPMGPPHLQ-------RPPFMPPPMSSMPPPPGMMFPPGMPPVTAPGTPA 129
Query: 190 STTPNRKTMPVEDKSDPPEG--------SEEAAEPRMD---TPEDQDLPP---CPEDIAK 235
P + + VE+K+ P+G + E+A + D + +L P +
Sbjct: 130 --LPPTEEIWVENKT--PDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQA 185
Query: 236 EKRTPAPEPEPCEA---SELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPD 292
+ + A +A ++ A+ ++ + + Q Q +AQ QA+ Q Q
Sbjct: 186 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQA 245
Query: 293 LLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQ 352
+ ++AQ + P V + T PS+ T AQT ++P
Sbjct: 246 QVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTP----TT 301
Query: 353 QKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSL 412
Q Q A P V T PQ HP PP PH+ PQ +
Sbjct: 302 QDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHP----QTLPP----AVPHSVPQPTT 353
Query: 413 LAPEQTPVVVHVCGLEMPPDAVEAGG---GMEKTLPEPVGTQVSM 454
P PV+V + +P + G GM + + QV++
Sbjct: 354 AIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAI 398
Score = 39.7 bits (91), Expect = 0.012
Identities = 72/314 (22%), Positives = 107/314 (34%), Gaps = 55/314 (17%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
Q Q Q Q Q Q Q Q Q Q Q+Q Q Q+Q AV P
Sbjct: 218 QAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQ------------AQAVGASTPTTSS 265
Query: 65 QQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYD---TAGLTMPTATLGN 121
P ++ ++S S A + Q P T D ++ +++ T T+
Sbjct: 266 PAPAVSTSTSSSTPSSTTSTTTTA------TSVAQTVSTPTTQDQTPSSAVSVATPTVSV 319
Query: 122 LRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGP----PPVGVPMNPSQFNLS 177
A+P P PQ P + PQ T P PP VP+ L
Sbjct: 320 STPAPTATPVQTVPQ-PHPQTLPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLP 378
Query: 178 G------------RNPQKQARTSSSTTPNRKTMPVEDKSDPPEG-----SEEAAEPRMDT 220
G +PQ S +T + + +G + E +
Sbjct: 379 GVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEK 438
Query: 221 PED-QDLPPCPEDIAKEKRTPAPEPEPCEA-----SELPAKRLR---SSEEPTEKEPPGQ 271
P++ ++ E I + + P+ EP P E E P K ++ EE TE+E Q
Sbjct: 439 PQELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQ 498
Query: 272 LQVKAQPQARMTVP 285
KA+P A +P
Sbjct: 499 ---KAKPVATAPIP 509
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 66.2 bits (160), Expect = 1e-10
Identities = 71/255 (27%), Positives = 90/255 (35%), Gaps = 28/255 (10%)
Query: 161 GPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDT 220
GPPP+ P P P + PN MP PP G P
Sbjct: 42 GPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMP 101
Query: 221 PEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQA 280
P +PP P + P P A PA K P G++ A
Sbjct: 102 PPMSSMPPPPGMMFP------PGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYY---NA 152
Query: 281 RMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQA 340
R T+ PD + ++++ P +L QAQVQ+Q Q + Q Q + Q QA
Sbjct: 153 RTRESAWTK-PDGVKVIQQSELTP-----MLAAQAQVQAQAQAQ-----AQAQAQAQAQA 201
Query: 341 QTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQT 400
Q Q Q Q Q Q Q +A+ Q Q Q Q QAQ Q Q Q VQ Q
Sbjct: 202 QAQA--------QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQA 253
Query: 401 HEQPHTQPQVSLLAP 415
+ P S AP
Sbjct: 254 QAVGASTPTTSSPAP 268
Score = 54.7 bits (130), Expect = 4e-07
Identities = 97/481 (20%), Positives = 170/481 (35%), Gaps = 84/481 (17%)
Query: 130 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSS 189
P + P PP + P+LQ R + PP +P P G P T +
Sbjct: 77 PPMPPPGGIPPPMGPPHLQ-------RPPFMPPPMSSMPPPPGMMFPPGMPPVTAPGTPA 129
Query: 190 STTPNRKTMPVEDKSDPPEG--------SEEAAEPRMD---TPEDQDLPP---CPEDIAK 235
P + + VE+K+ P+G + E+A + D + +L P +
Sbjct: 130 --LPPTEEIWVENKT--PDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQA 185
Query: 236 EKRTPAPEPEPCEA---SELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPD 292
+ + A +A ++ A+ ++ + + Q Q +AQ QA+ Q Q
Sbjct: 186 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQA 245
Query: 293 LLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQ 352
+ ++AQ + P V + T PS+ T AQT ++P
Sbjct: 246 QVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTP----TT 301
Query: 353 QKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSL 412
Q Q A P V T PQ HP PP PH+ PQ +
Sbjct: 302 QDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHP----QTLPP----AVPHSVPQPTT 353
Query: 413 LAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECEN 472
P PV+V PP V G +P P+ M+ + +C
Sbjct: 354 AIPAFPPVMV-------PPFRVPLPG-----MPIPLPGVAMMQIV----SCPYVKTVATT 397
Query: 473 RAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPA--ATSTPSKQAL 530
+ +PG+ P+ P+ P +++++PA A +T +
Sbjct: 398 KTGVLPGM---------------------APPIVPMIHPQVAIAASPATLAGATAVSEWT 436
Query: 531 QFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLL--SLLPVPRDVLETEDEE 588
++ K + + + +PQ + +++ + + S P+P +ETE+E+
Sbjct: 437 EYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEPLP---METEEED 493
Query: 589 P 589
P
Sbjct: 494 P 494
Score = 33.5 bits (75), Expect = 0.84
Identities = 74/319 (23%), Positives = 111/319 (34%), Gaps = 44/319 (13%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQ-QLLQQSPPQAPLPM-AVSRGLPPQ 62
Q Q Q Q Q Q Q Q Q Q Q+Q Q Q+Q Q + S P P AVS
Sbjct: 218 QAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSS 277
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMP------PATYDTAGLTMP- 115
P T +A+ + ++ Q A P PA T T+P
Sbjct: 278 TPSS---TTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQ 334
Query: 116 --TATLGNLRGYGMASPGLAAPS----LTPP-QLATPNLQQFFPQATRQSLLGPPPVGVP 168
TL + + P A P+ + PP ++ P + P ++ P V
Sbjct: 335 PHPQTLPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTV 394
Query: 169 MNPSQFNLSGR--------NPQKQARTSSSTTPNRKTMPVEDKSDPPEG-----SEEAAE 215
L G +PQ S +T + + +G + E
Sbjct: 395 ATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLE 454
Query: 216 PRMDTPED-QDLPPCPEDIAKEKRTPAPEPEPCEA-----SELPAKRLR---SSEEPTEK 266
+ P++ ++ E I + + P+ EP P E E P K ++ EE TE+
Sbjct: 455 STWEKPQELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEE 514
Query: 267 EPPGQLQVKAQPQARMTVP 285
E Q KA+P A +P
Sbjct: 515 EKAAQ---KAKPVATAPIP 530
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 65.9 bits (159), Expect = 2e-10
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 277 QPQARMTVPKQTQTPDLLPEALEAQVLP-RFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 335
Q Q++++ Q LP A + V P QP+ Q AQ Q QTQP+ P+ QP+
Sbjct: 2364 QRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPA-----QPE 2418
Query: 336 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ--KQVQPQVHTQAQPSVQPQEHPPAQVS 393
+Q Q + QT + QP Q ++PQ Q QPQ + Q Q V+ Q P+Q
Sbjct: 2419 VQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQS--PSQTR 2476
Query: 394 VQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMP 430
++P + P Q QV + P+ H L++P
Sbjct: 2477 IRPSTPSQLSPGQQSQVQTTTSQPIPIQPHT-SLQIP 2512
Score = 61.6 bits (148), Expect = 3e-09
Identities = 67/271 (24%), Positives = 100/271 (36%), Gaps = 41/271 (15%)
Query: 153 QATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQAR--------TSSSTTPNRKTMPVEDKS 204
Q T Q L P V V P Q + P + T+++T T +
Sbjct: 2300 QTTGQLQLIPQGVTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAA 2359
Query: 205 DPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPT 264
E + P+M +D+ LPP P EA A+ + T
Sbjct: 2360 GTGEQRQSKLSPQMQVHQDKTLPPAQSSSVG----------PAEAQPQTAQPSAQPQPQT 2409
Query: 265 EKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVL---QVQAQVQSQT 321
+ + P Q +V+ QP+ V QT +P + +P+V Q Q+ VQ Q+
Sbjct: 2410 QPQSPAQPEVQTQPE----VQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQS 2465
Query: 322 QPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPS 381
R+ S Q +++ +Q SP QQ QVQ Q Q Q+ +Q QP
Sbjct: 2466 PVRVQSPS---QTRIRPSTPSQLSPG----QQSQVQTTTSQPIPIQPHTSLQIPSQGQPQ 2518
Query: 382 VQPQ---------EHPPAQVSVQPPEQTHEQ 403
QPQ EH + S+ P E+ Q
Sbjct: 2519 SQPQVVMKHNAVIEHLKQKKSMTPAEREENQ 2549
Score = 43.1 bits (100), Expect = 0.001
Identities = 40/143 (27%), Positives = 50/143 (34%), Gaps = 8/143 (5%)
Query: 270 GQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTD 329
GQLQ+ Q + P Q L+ A+ + RF L A S T + +T
Sbjct: 2303 GQLQLIPQGVTVLPGPGQ----QLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTA 2358
Query: 330 T----QVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQ 385
Q Q KL Q Q Q V P Q Q QPQ TQ Q QP+
Sbjct: 2359 AGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPE 2418
Query: 386 EHPPAQVSVQPPEQTHEQPHTQP 408
+V Q +H QP
Sbjct: 2419 VQTQPEVQTQTTVSSHVPSEAQP 2441
Score = 31.6 bits (70), Expect = 3.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
Query: 648 HKDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEE 700
+ D E + E+++ ++E+ +GD EE +D ED+EE E+EE+
Sbjct: 126 YDDHESEEEEEEEDMVSEEEEEE---------DGDAEETQDSEDDEEDEMEED 169
Score = 30.0 bits (66), Expect = 9.3
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 227 PPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPK 286
P P A E+ PAP P P + P LRS + + Q + P+ R++ P+
Sbjct: 9 PKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPR 68
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 65.5 bits (158), Expect = 2e-10
Identities = 53/116 (45%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
QQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ P + QQ
Sbjct: 152 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGK-----QAKEQQQQQQQ 206
Query: 65 QQPLLNLQGTNSASLLNGSMLQRA--LLLQQLQGL-----DQFAMPPATYDTAGLT 113
QQ L Q LL LQ+ LL Q QGL Q A+P + AGL+
Sbjct: 207 QQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLS 262
Score = 55.1 bits (131), Expect = 3e-07
Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 260 SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVL-PRFQPRVLQVQAQVQ 318
S + ++K+ P Q+ V A MT Q TP + + L+ QVL P+ +LQ Q V
Sbjct: 75 SPKSSDKQRPLQVPVSV---AMMT--PQVITPQQMQQILQQQVLSPQQLQALLQQQQAVM 129
Query: 319 SQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQA 378
Q Q Q+Q +KQ E L LQ Q Q Q QQ+ + Q+Q Q Q Q
Sbjct: 130 LQQQ--------QLQEFYKKQQ------EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 175
Query: 379 QPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQ 417
Q Q Q+ Q P +Q EQ Q Q LA +Q
Sbjct: 176 QQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 214
Score = 49.3 bits (116), Expect = 1e-05
Identities = 51/159 (32%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 5 QQQQQLQQQQQQLQQL---QQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
QQQQ + QQQQLQ+ QQ+QL Q LQQQQ Q QQ QQ Q +
Sbjct: 123 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 182
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGN 121
QQ QQ G + Q+ L QQL Q L +
Sbjct: 183 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLL-------S 235
Query: 122 LRGYGMAS--PGLAA---PSLTPPQLATPNLQQFFPQAT 155
L+ G+ S PG AA SL L+ +QQ + + T
Sbjct: 236 LQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVT 274
Score = 43.9 bits (102), Expect = 6e-04
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 273 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQV---QAQVQSQTQPRIPSTD 329
QV Q + + +Q +P L L+ Q Q + LQ + Q Q Q
Sbjct: 97 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQ 156
Query: 330 TQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPP 389
Q Q + Q+Q Q Q + QQ+Q Q Q QQ+ P KQ + Q Q Q +
Sbjct: 157 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLV 216
Query: 390 AQVSVQPPEQTHEQPH 405
Q + +Q +Q H
Sbjct: 217 FQQQLLQMQQLQQQQH 232
Score = 36.2 bits (82), Expect = 0.13
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 296 EALEA--QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQ 353
+AL+A Q+L + Q L+ Q ++P + + P++ Q Q + VL
Sbjct: 56 QALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQVLSP 115
Query: 354 KQVQPQLQQE----------AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQ 403
+Q+Q LQQ+ E K+ Q Q+H Q Q Q+ Q Q +Q +Q
Sbjct: 116 QQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ 175
Query: 404 PHTQPQ 409
Q Q
Sbjct: 176 QQQQQQ 181
Score = 33.5 bits (75), Expect = 0.84
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 12 QQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAV--SRGLPPQQPQQPLL 69
QQQQ LQ +Q LQQQ L + +Q P Q P+ +A+ + + PQQ QQ +L
Sbjct: 53 QQQQALQAARQLLLQQQT---SGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQ-IL 108
Query: 70 NLQGTNSASLLNGSMLQRALLLQQLQ 95
Q + L Q+A++LQQ Q
Sbjct: 109 QQQVLSPQQLQALLQQQQAVMLQQQQ 134
Score = 31.2 bits (69), Expect = 4.2
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLL-----QLQQLLQQSPPQAPLPMAVSRG 58
QQ QQ LQQQ QQLQ LQQQQ + QLQ+ ++ Q L + +
Sbjct: 102 QQMQQILQQQVLSPQQLQAL------LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 155
Query: 59 LPPQQPQQ 66
QQ QQ
Sbjct: 156 QQQQQQQQ 163
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 65.5 bits (158), Expect = 2e-10
Identities = 53/116 (45%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
QQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ P + QQ
Sbjct: 60 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGK-----QAKEQQQQQQQ 114
Query: 65 QQPLLNLQGTNSASLLNGSMLQRA--LLLQQLQGL-----DQFAMPPATYDTAGLT 113
QQ L Q LL LQ+ LL Q QGL Q A+P + AGL+
Sbjct: 115 QQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLS 170
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/132 (34%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 287 QTQTPDLLPEALEAQVL-PRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTS 345
Q TP + + L+ QVL P+ +LQ Q V Q Q Q+Q +KQ
Sbjct: 5 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQ--------QLQEFYKKQQ----- 51
Query: 346 PEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPH 405
E L LQ Q Q Q QQ+ + Q+Q Q Q Q Q Q Q+ Q P +Q EQ
Sbjct: 52 -EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQ 110
Query: 406 TQPQVSLLAPEQ 417
Q Q LA +Q
Sbjct: 111 QQQQQQQLAAQQ 122
Score = 49.3 bits (116), Expect = 1e-05
Identities = 51/159 (32%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 5 QQQQQLQQQQQQLQQL---QQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
QQQQ + QQQQLQ+ QQ+QL Q LQQQQ Q QQ QQ Q +
Sbjct: 31 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 90
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGN 121
QQ QQ G + Q+ L QQL Q L +
Sbjct: 91 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLL-------S 143
Query: 122 LRGYGMAS--PGLAA---PSLTPPQLATPNLQQFFPQAT 155
L+ G+ S PG AA SL L+ +QQ + + T
Sbjct: 144 LQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVT 182
Score = 46.6 bits (109), Expect = 1e-04
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 273 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQV 332
QV Q + + +Q +P L L+ Q Q + LQ + + Q ++ Q
Sbjct: 5 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQ---EFYKKQQEQLHLQLLQQ 61
Query: 333 QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 392
Q + Q+Q Q Q + QQ+Q Q Q QQ+ + Q+Q P + Q Q Q+ A
Sbjct: 62 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQ 121
Query: 393 SVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQV 452
+ +Q + Q Q LL+ ++ ++ +PP + LP
Sbjct: 122 QLVFQQQLLQMQQLQQQQHLLSLQRQGLI------SIPPG--------QAALP------- 160
Query: 453 SMEEIQNESACGLDVGECENRAREMPGVWG------AGGSLKVTILQSSDSRAFSTVPLT 506
+Q+ GL E + +E+ GV G L +T SS + + +T +
Sbjct: 161 ----VQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKAS 216
Query: 507 P 507
P
Sbjct: 217 P 217
Score = 38.9 bits (89), Expect = 0.020
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 23/188 (12%)
Query: 269 PGQLQVKAQPQARMTVPKQT-------QTPDLLPEALEAQVLPRFQPRVLQVQAQV-QSQ 320
P QLQ Q Q + + +Q Q L + L+ Q + Q + Q Q Q Q Q
Sbjct: 23 PQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQ 82
Query: 321 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP 380
Q Q Q + Q+Q Q Q P +Q+Q Q Q QQ A Q Q Q+ Q
Sbjct: 83 QQ-------QQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ- 134
Query: 381 SVQPQEH-----PPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVE 435
+Q Q+H +S+ PP Q + PQ L E + V G+ D
Sbjct: 135 -LQQQQHLLSLQRQGLISI-PPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGI 192
Query: 436 AGGGMEKT 443
GG++ T
Sbjct: 193 KHGGLDLT 200
Score = 31.2 bits (69), Expect = 4.2
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLL-----QLQQLLQQSPPQAPLPMAVSRG 58
QQ QQ LQQQ QQLQ LQQQQ + QLQ+ ++ Q L + +
Sbjct: 10 QQMQQILQQQVLSPQQLQAL------LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 63
Query: 59 LPPQQPQQ 66
QQ QQ
Sbjct: 64 QQQQQQQQ 71
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 65.5 bits (158), Expect = 2e-10
Identities = 53/116 (45%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
QQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ P + QQ
Sbjct: 177 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGK-----QAKEQQQQQQQ 231
Query: 65 QQPLLNLQGTNSASLLNGSMLQRA--LLLQQLQGL-----DQFAMPPATYDTAGLT 113
QQ L Q LL LQ+ LL Q QGL Q A+P + AGL+
Sbjct: 232 QQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAALPVQSLPQAGLS 287
Score = 52.8 bits (125), Expect = 1e-06
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 276 AQPQARMTVPKQTQTPDLLPEALEAQVL-PRFQPRVLQVQAQVQSQTQPRIPSTDTQVQP 334
A P + + Q TP + + L+ QVL P+ +LQ Q V Q Q Q+Q
Sbjct: 111 AVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQ--------QLQE 162
Query: 335 KLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSV 394
+KQ E L LQ Q Q Q QQ+ + Q+Q Q Q Q Q Q Q+ Q
Sbjct: 163 FYKKQQ------EQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 216
Query: 395 QPPEQTHEQPHTQPQVSLLAPEQ 417
P +Q EQ Q Q LA +Q
Sbjct: 217 HPGKQAKEQQQQQQQQQQLAAQQ 239
Score = 49.3 bits (116), Expect = 1e-05
Identities = 51/159 (32%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 5 QQQQQLQQQQQQLQQL---QQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPP 61
QQQQ + QQQQLQ+ QQ+QL Q LQQQQ Q QQ QQ Q +
Sbjct: 148 QQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 207
Query: 62 QQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGN 121
QQ QQ G + Q+ L QQL Q L +
Sbjct: 208 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLL-------S 260
Query: 122 LRGYGMAS--PGLAA---PSLTPPQLATPNLQQFFPQAT 155
L+ G+ S PG AA SL L+ +QQ + + T
Sbjct: 261 LQRQGLISIPPGQAALPVQSLPQAGLSPAEIQQLWKEVT 299
Score = 46.6 bits (109), Expect = 1e-04
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 273 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQV 332
QV Q + + +Q +P L L+ Q Q + LQ + + Q ++ Q
Sbjct: 122 QVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQ---EFYKKQQEQLHLQLLQQ 178
Query: 333 QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 392
Q + Q+Q Q Q + QQ+Q Q Q QQ+ + Q+Q P + Q Q Q+ A
Sbjct: 179 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQ 238
Query: 393 SVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQV 452
+ +Q + Q Q LL+ ++ ++ +PP + LP
Sbjct: 239 QLVFQQQLLQMQQLQQQQHLLSLQRQGLI------SIPPG--------QAALP------- 277
Query: 453 SMEEIQNESACGLDVGECENRAREMPGVWG------AGGSLKVTILQSSDSRAFSTVPLT 506
+Q+ GL E + +E+ GV G L +T SS + + +T +
Sbjct: 278 ----VQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNNSSSTTSSNTSKAS 333
Query: 507 P 507
P
Sbjct: 334 P 334
Score = 38.9 bits (89), Expect = 0.020
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 23/188 (12%)
Query: 269 PGQLQVKAQPQARMTVPKQT-------QTPDLLPEALEAQVLPRFQPRVLQVQAQV-QSQ 320
P QLQ Q Q + + +Q Q L + L+ Q + Q + Q Q Q Q Q
Sbjct: 140 PQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQ 199
Query: 321 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQP 380
Q Q Q + Q+Q Q Q P +Q+Q Q Q QQ A Q Q Q+ Q
Sbjct: 200 QQ-------QQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ- 251
Query: 381 SVQPQEH-----PPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVE 435
+Q Q+H +S+ PP Q + PQ L E + V G+ D
Sbjct: 252 -LQQQQHLLSLQRQGLISI-PPGQAALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGI 309
Query: 436 AGGGMEKT 443
GG++ T
Sbjct: 310 KHGGLDLT 317
Score = 31.2 bits (69), Expect = 4.2
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLL-----QLQQLLQQSPPQAPLPMAVSRG 58
QQ QQ LQQQ QQLQ LQQQQ + QLQ+ ++ Q L + +
Sbjct: 127 QQMQQILQQQVLSPQQLQAL------LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 180
Query: 59 LPPQQPQQ 66
QQ QQ
Sbjct: 181 QQQQQQQQ 188
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 64.3 bits (155), Expect = 4e-10
Identities = 86/321 (26%), Positives = 120/321 (37%), Gaps = 44/321 (13%)
Query: 130 PGLAAPSL---TPPQLAT----PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQ 182
PGL +PSL TP A PNL P T S G P G+P PS +LS P
Sbjct: 3127 PGLNSPSLPGFTPSNTALTSPKPNLMGL-PSTTVPSP-GLPTSGLPNKPSSASLSSPTPA 3184
Query: 183 KQARTSSSTTP----NRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKR 238
+ P ++ P + PP ++ P++ + Q + KEK
Sbjct: 3185 QATMAMGPQQPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQRKDKDSEKVKEKE 3244
Query: 239 ---------TPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQ 289
P P+ E EA A + S+ PT + Q++A A + P
Sbjct: 3245 KAHKGKGEPLPVPKKEKGEAPTATAATI-SAPLPTMEYAVDPAQLQALQAALTSDPTALL 3303
Query: 290 TPDLLPEALEAQVLPRFQPRVL-QVQAQVQS-QTQPRIPSTDTQVQPKLQKQAQTQTSPE 347
T LP +P F P Q+ +QS QP QA SP
Sbjct: 3304 TSQFLP-----YFVPGFSPYYAPQIPGALQSGYLQPMYGMEGLFPYSPALSQALMGLSPG 3358
Query: 348 HLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP----------- 396
L+ Q +Q Q LQ+ Q+Q Q Q+ Q Q VQ Q+ +Q V P
Sbjct: 3359 SLLQQYQQYQQSLQEAI--QQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAK 3416
Query: 397 -PEQTHEQPHTQPQVSLLAPE 416
+ EQ +T +VS L P+
Sbjct: 3417 ESPKPEEQKNTPREVSPLLPK 3437
Score = 57.0 bits (136), Expect = 7e-08
Identities = 109/441 (24%), Positives = 150/441 (34%), Gaps = 56/441 (12%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQ 62
S+QQQQQ QQQQQQ QQ QQQ Q Q Q LQQ LQQ
Sbjct: 1721 SRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQ------------------ 1762
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALL-LQQLQG-LDQFAMPPATYDTAGLTMPTATLG 120
Q L+ Q N L + M LL LQQ Q L F +P A + T G
Sbjct: 1763 --QAALIQSQLFNPTLLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSG 1820
Query: 121 NLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN 180
L G PGL Q+ + QQ PQ + L + PSQ +
Sbjct: 1821 ALTLTG-TGPGLLEDLKAQVQVPQQSHQQILPQQQQNQLSIAQSHSALLQPSQ------H 1873
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
P+K+ + K + + D EG E P+ + LP + K++ P
Sbjct: 1874 PEKK----NKLVIKEKEKESQRERDSAEGGEGNTGPK------ETLPDALKAKEKKELAP 1923
Query: 241 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP--EAL 298
EP A R + E G V + + V K+ D E L
Sbjct: 1924 GGGSEPSMLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTDQGENLEKL 1983
Query: 299 EAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQP 358
E + +L +++ + Q P + K + + P ++P
Sbjct: 1984 ECDSCGKLFSNILILKSHQEHVHQNYFPFKQLERFAKQYRDHYDKLYP---------LRP 2034
Query: 359 QLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP---PEQTHEQPHTQPQVSLLAP 415
Q + P P A P QP P S P P QP + P L P
Sbjct: 2035 QTPEPPPPPPPPPPPPLPAAPP--QPASTPAIPASAPPITSPTIAPAQP-SVPLTQLSMP 2091
Query: 416 EQTPVVVHVCGLEMPPDAVEA 436
+ P+ + MP + A
Sbjct: 2092 MELPIFSPLMMQTMPLQTLPA 2112
Score = 47.4 bits (111), Expect = 6e-05
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 25/218 (11%)
Query: 534 CYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRR 593
C +C+ + + FQ H +H Q+ + H+ + + + + P
Sbjct: 986 CKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGN-----PVHL 1040
Query: 594 WCNTCQLY---------------YMGDLIQHRRTQDHK--IAKQSLRPFCTVCNRYFKTP 636
CN C Y + L ++ Q H+ + +S C +CN K
Sbjct: 1041 KCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQQHESGVEGESCYYHCVLCNYSTKAK 1100
Query: 637 RKFVEHVKSQGHK--DKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEE-EDDEDEE 693
++HV+S H+ + ++L+ L+K + +DED C D EE ED E
Sbjct: 1101 LNLIQHVRSMKHQRSESLRKLQRLQKGLPEEDEDLGQIFTIRRCPSTDPEEAIEDVEGPS 1160
Query: 694 EIEVEEELCKQVRSRDISREEWKGSETYSPNTAYGVDF 731
E + E + + S + + T SP T+ + F
Sbjct: 1161 ETAADPEELAKDQEGGASSSQAEKELTDSPATSKRISF 1198
Score = 43.1 bits (100), Expect = 0.001
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLP 52
QQ QQ Q Q+ +QQ QQ+QLQQQQ Q+ Q Q + PP AP P
Sbjct: 3362 QQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSP 3410
Score = 40.4 bits (93), Expect = 0.007
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 10 LQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQP 64
L QQ QQ QQ Q+ +QQQQ +Q Q Q Q++ QQ P + P+ P + P
Sbjct: 3360 LLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDP 3414
Score = 39.7 bits (91), Expect = 0.012
Identities = 80/367 (21%), Positives = 137/367 (37%), Gaps = 58/367 (15%)
Query: 311 LQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ--- 367
LQ+ A+ + + +PKL + Q P +Q Q +P+LQQ+ +P+
Sbjct: 2407 LQLTAEAEELATFNSKTEAGDEKPKLAEAPSAQ--PNQTQEKQGQPKPELQQQEQPEQKT 2464
Query: 368 ---KQVQPQVHT-----QAQPSVQPQEHPPAQVSVQPPEQTH-----EQPHTQPQVSLLA 414
+Q PQ+ + Q P P + P Q S P + +H T Q++ L
Sbjct: 2465 NTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPSQLSHLPLKPLHTSTPQQLANLP 2524
Query: 415 PEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRA 474
P+ P C L P E Q+ QN+ + +R+
Sbjct: 2525 PQLIPYQCDQCKLAFP--------SFEHWQEH---QQLHFLSAQNQ----FIHPQFLDRS 2569
Query: 475 REMP-GVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFF 533
+MP ++ L + L S + +P S + STP +T K+ L+
Sbjct: 2570 LDMPFMLFDPSNPLLASQLLSG--------AIPQIPASSATSPSTPTSTMNTLKRKLEE- 2620
Query: 534 CYICKASCS-SQQEFQDHMSEPQHQQRL------GEIQHMSQACLLSLLPVPRDVLETED 586
KAS S + + EPQ +RL +++ + Q LL P R +L+
Sbjct: 2621 ----KASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPT-RKMLDHIA 2675
Query: 587 EEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQ 646
E ++ Q+++ + R+ Q + C C FK H++S+
Sbjct: 2676 HEVGLKK--RVVQVWFQNTRARERKGQFRAVGPAQAHRRCPFCRALFKAKTALEAHIRSR 2733
Query: 647 GHKDKAK 653
H +AK
Sbjct: 2734 -HWHEAK 2739
Score = 39.3 bits (90), Expect = 0.015
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQ--QQQLLQLQQL--LQQSPPQAP---LPMAV 55
S Q Q ++Q Q +LQQQ+ +Q+ QQ+L QL L L Q PPQAP P+
Sbjct: 2437 SAQPNQTQEKQGQPKPELQQQEQPEQKTNTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQ 2496
Query: 56 SRGLPPQQPQQPLLNLQGTNSASLLN 81
S P Q PL L + L N
Sbjct: 2497 SSPSPSQLSHLPLKPLHTSTPQQLAN 2522
Score = 38.1 bits (87), Expect = 0.034
Identities = 60/270 (22%), Positives = 99/270 (36%), Gaps = 32/270 (11%)
Query: 4 QQQQQQLQQQQQQLQ--------------QLQQQQLQQQQLQQQQLLQLQQLLQQSPPQA 49
Q QQQ QQQQ Q+Q QL QQ QQ++ + + ++ ++ + +
Sbjct: 3194 QPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQRKDKDSEKVKEKEKAHKGKGE- 3252
Query: 50 PLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDT 109
PLP +P ++ + T SA L ++ A+ QLQ L T
Sbjct: 3253 PLP------VPKKEKGEAPTATAATISAPL---PTMEYAVDPAQLQALQAALTSDPTALL 3303
Query: 110 AGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPM 169
+P G Y PG P L + P A Q+L+G P +
Sbjct: 3304 TSQFLPYFVPGFSPYYAPQIPGALQSGYLQPMYGMEGLFPYSP-ALSQALMGLSPGSLLQ 3362
Query: 170 NPSQFNLSGRNP-QKQARTSSSTTPNRKTMPVEDKSD----PPEGSEEAAEPRMDTPEDQ 224
Q+ S + Q+Q + +K + K+ PP +P ++P+ +
Sbjct: 3363 QYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAKESPKPE 3422
Query: 225 DLPPCPEDIAK--EKRTPAPEPEPCEASEL 252
+ P +++ K PE E A L
Sbjct: 3423 EQKNTPREVSPLLPKLPEEPEAESKSADSL 3452
Score = 33.9 bits (76), Expect = 0.64
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 334 PKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQ 383
P K+A + + + +Q+Q Q Q QQ+ + Q+Q Q Q QAQ VQ
Sbjct: 1704 PSEPKEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQ 1753
Score = 33.9 bits (76), Expect = 0.64
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 37/190 (19%)
Query: 190 STTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLP--------PCPEDIAKEKRTPA 241
S PN+ T + + P +E E + +TP+ Q LP P P A + P
Sbjct: 2437 SAQPNQ-TQEKQGQPKPELQQQEQPEQKTNTPQ-QKLPQLVSLPSLPQPPPQAPPPQCPL 2494
Query: 242 PE--PEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVP-------------- 285
P+ P P + S LP K L +S P QL Q ++ P
Sbjct: 2495 PQSSPSPSQLSHLPLKPLHTSTPQQLANLPPQLIPYQCDQCKLAFPSFEHWQEHQQLHFL 2554
Query: 286 ---KQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRI-------PSTDTQVQPK 335
Q P L +L+ + F P + +Q+ S P+I PST T
Sbjct: 2555 SAQNQFIHPQFLDRSLDMPFM-LFDPSNPLLASQLLSGAIPQIPASSATSPSTPTSTMNT 2613
Query: 336 LQKQAQTQTS 345
L+++ + + S
Sbjct: 2614 LKRKLEEKAS 2623
Score = 33.5 bits (75), Expect = 0.84
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 680 EGDEEEEEDDEDEEEIEVEEELCKQVRSRDISRE 713
E + EEEE++E+EEE E E+E CK + ++ E
Sbjct: 469 EEEAEEEEEEEEEEEEEEEDEGCKGLFPSELDEE 502
Score = 32.0 bits (71), Expect = 2.4
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 313 VQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQP 372
+ A + S ++P+ + +Q Q Q QQ+Q Q Q QQ+A+ Q Q
Sbjct: 1697 IGANIASPSEPKEANRKKLADMIASRQQQQQQQ------QQQQQQQQQQQQAQTLAQAQA 1750
Query: 373 QVHTQAQPSVQPQ 385
QV Q +Q Q
Sbjct: 1751 QVQAHLQQELQQQ 1763
Score = 30.8 bits (68), Expect = 5.4
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 656 KSLEKEIAGQDEDHFITVDAVGCF---------EGDEEEEEDDEDEEEIEVEEE 700
KS E + +G E V CF E +EEEEE++ +EEE E EEE
Sbjct: 429 KSSEGKDSGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEEEAEEEEEEEEEE 482
Score = 30.4 bits (67), Expect = 7.1
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 680 EGDEEEEEDDEDEEEIEVEEE 700
E +EEEEE +E+EEE E EEE
Sbjct: 464 EEEEEEEEAEEEEEEEEEEEE 484
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 63.9 bits (154), Expect = 6e-10
Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 32/296 (10%)
Query: 162 PPPVGVPMNPSQFNLSGRNPQKQAR---------TSSSTTPNRKTMPVEDKSDPPEGSEE 212
PP V + Q L P+++AR T + P P+ ++ E S E
Sbjct: 414 PPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAE 473
Query: 213 -----AAEPRMD-TPEDQDLPPCPEDIAKEK----RTPAPEPEPCEASELPAKRLRSSEE 262
A EP D TP + P E A+E ++P E E + + L + E
Sbjct: 474 IQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEA 533
Query: 263 PTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQA------- 315
P ++ P ++ + P + Q+P ++E L P + A
Sbjct: 534 PADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAI 593
Query: 316 QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVH 375
Q+ + T+ +VQP ++A + P +VQP +EA + Q P
Sbjct: 594 QLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE 653
Query: 376 TQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPP 431
A+ P E PA+V P E+ +V L E+TP+ + + PP
Sbjct: 654 APAEVQPPPAEEAPAEVQPPPAEE------APAEVQSLPAEETPIEETLAAVHSPP 703
Score = 46.6 bits (109), Expect = 1e-04
Identities = 80/392 (20%), Positives = 144/392 (36%), Gaps = 55/392 (14%)
Query: 183 KQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAP 242
K+ ++ P+ + P + + E + AEPR + P E+ + A
Sbjct: 250 KKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAV 309
Query: 243 EPEPCEASELPAKRLRSSEEPTEKEPPG-------QLQVKAQPQARMTVPKQTQTPDLLP 295
+ PA+ E P E +PP +L + P + P + ++LP
Sbjct: 310 AENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILP 369
Query: 296 EALE----AQVL-----PRFQPRVLQVQ------------AQVQSQTQPRIPSTDTQVQP 334
E ++L P Q ++VQ A+V+ P + T VQP
Sbjct: 370 PPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVE---PPTVEETLADVQP 426
Query: 335 KLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQ---------PQ 385
L ++A + + E L L P + E Q + P+ T + S + P
Sbjct: 427 LLPEEAPREEARE-LQLSTAMETPAEEAPTEFQSPL-PKETTAEEASAEIQLLAATEPPA 484
Query: 386 EHPPAQVSVQPPEQTH-EQPHTQPQVSL----LAPEQTPVVVHVCGLEMPPDAVEAGGGM 440
+ PA+ E+T E+ H + Q L A E + + + +E P D E
Sbjct: 485 DETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPAD--ETPAEA 542
Query: 441 EKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPG--VWGAGGSLKVTILQSSDSR 498
+ L E + + E+Q+ SA G+ + E + G S + +L ++++
Sbjct: 543 QSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEAS 602
Query: 499 AFSTVPLTPVPRPSDSVSS---TPAATSTPSK 527
A P P P++ + P A P++
Sbjct: 603 A-EEAPAEVQPPPAEEAPAEVQPPPAEEAPAE 633
Score = 45.1 bits (105), Expect = 3e-04
Identities = 45/207 (21%), Positives = 73/207 (35%), Gaps = 25/207 (12%)
Query: 192 TPNRKTMPVED---KSDPPEGSEEAAEPRM--------------DTPEDQDLPPCPEDIA 234
+P+ K + +E+ + PP G E AE + P + PP E+
Sbjct: 561 SPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPA-EEAP 619
Query: 235 KEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPG--QLQVKAQPQARMTVPKQTQTPD 292
E + P E P E PA+ E P E +PP + + QP P + Q P
Sbjct: 620 AEVQPPPAEEAPAEVQPPPAE-----EAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPP 674
Query: 293 LLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQ 352
E Q LP + + + A V S +P+ + V T +
Sbjct: 675 AEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEFPIGEA 734
Query: 353 QKQVQPQLQQEAEPQKQVQPQVHTQAQ 379
+V P ++ + + V T+ Q
Sbjct: 735 SAEVSPPPSEQTPEDEALVENVSTEFQ 761
Score = 42.7 bits (99), Expect = 0.001
Identities = 69/328 (21%), Positives = 126/328 (38%), Gaps = 57/328 (17%)
Query: 183 KQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPE---DQDLPPC---------- 229
K +T + ++ VE+ P E S + E ++ PE D ++PP
Sbjct: 71 KSLQTDTIVEEKKEVKLVEETVVPEEKSADVREAAIELPESVQDVEIPPNIPSVQLKMDR 130
Query: 230 -----------------PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQL 272
E + KE++T E E S + +S E+ + + G++
Sbjct: 131 SQQTSRTGYWTMMNIPPVEKVDKEQQTYFSESEIVVISRPDSSSTKSKEDALKHKSSGKI 190
Query: 273 QVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQV 332
P+ + P ++ + + + + V + + + + +P Q
Sbjct: 191 FASEHPEFQ---PATNSNEEIGQKNISRTSFTQETKKGPPVLLEDELREEVTVPVV--QE 245
Query: 333 QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQP--QVHTQAQPSVQPQEHPPA 390
++K A + P ++QP L +EA + + +P + H Q QPS +E P A
Sbjct: 246 GSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPST--EETPDA 303
Query: 391 Q---------VSVQPPEQTHEQPHTQPQVSLLAP--EQTPVVVHVCGLEMPPDAVEAGG- 438
+ V VQPP E P + + P E++P V + + +PP A E+
Sbjct: 304 EAATAVAENSVKVQPP-PAEEAPLVEFPAEIQPPSAEESPSVELLAEI-LPPSAEESPSE 361
Query: 439 -GMEKTLPEPVGTQVSME---EIQNESA 462
+ LP P S+E EI++ SA
Sbjct: 362 EPPAEILPPPAEKSPSVELLGEIRSPSA 389
Score = 34.3 bits (77), Expect = 0.49
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 33/163 (20%)
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAE----PRMDTPEDQDLPPCPEDIAKE 236
P + + P + P E + PP E AE P + P + PP E+ E
Sbjct: 613 PPAEEAPAEVQPPPAEEAPAEVQ--PPPAEEAPAEVQPPPAEEAPAEVQPPPA-EEAPAE 669
Query: 237 KRTPAPEPEPCEASELPAKRLRSSEE------------PTEK------EPPGQLQVK--- 275
+ P E P E LPA+ E P E+ PP L +
Sbjct: 670 VQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEF 729
Query: 276 --AQPQARMTVPKQTQTPDLLPEALEAQVLPRFQ-PRVLQVQA 315
+ A ++ P QTP+ EAL V FQ P+V + A
Sbjct: 730 PIGEASAEVSPPPSEQTPE--DEALVENVSTEFQSPQVAGIPA 770
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 63.5 bits (153), Expect = 8e-10
Identities = 83/365 (22%), Positives = 136/365 (37%), Gaps = 76/365 (20%)
Query: 130 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGR---------- 179
P P + PP+ P + P A + PP VP P + +
Sbjct: 10491 PPTKVPEVLPPKEVVPEKKVPVPPAKKPEA---PPPKVPEAPKEVVPEKKVPVPPPKKPE 10547
Query: 180 -NPQKQARTSSSTTPNRKT---MPVEDKSDPPEGSEE-----------AAEPRMDTPEDQ 224
P K + P +K +P + +S PPE E AA P+
Sbjct: 10548 VPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPV 10607
Query: 225 DLPPCPEDIAKEKRTPAPEPE-----PCEASELPAKRLRSS------------------E 261
+P P+++ EK+ P P P+ P + E+P + E
Sbjct: 10608 KVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPESPPPEVFE 10667
Query: 262 EPTE---KEPPGQLQVKAQPQA--RMTVPKQTQTPDLLPEALEAQVLPRFQP-RVLQVQA 315
EP E +EPP ++ + +P A ++TVP + P+ A+ A+ P P +V +V
Sbjct: 10668 EPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKPVPEKKAPAVVAK-KPELPPVKVPEVPK 10726
Query: 316 QVQSQTQ-----PRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQV 370
+V + + P+ P P++ K+ V+ +K+V + E P K
Sbjct: 10727 EVVPEKKVPLVVPKKPEAPPAKVPEVPKE----------VVPEKKVAVPKKPEVPPAK-- 10774
Query: 371 QPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPV-VVHVCGLEM 429
P+V + +P P + PPE E P+ + E+ PV V E+
Sbjct: 10775 VPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEEIAPEEEIAPEEEKPVPVAEEEEPEV 10834
Query: 430 PPDAV 434
PP AV
Sbjct: 10835 PPPAV 10839
Score = 55.1 bits (131), Expect = 3e-07
Identities = 73/324 (22%), Positives = 132/324 (40%), Gaps = 58/324 (17%)
Query: 163 PPVGVPMNPSQFNLSGRNPQKQART--SSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDT 220
PP VP P + P+++ P +P K PE P+
Sbjct: 9974 PPAKVPEVP-------KKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVE 10026
Query: 221 PEDQDLPPCPEDIAKEKRTPAPEPE-----PCEASELPAKRLRSSEEPTE-----KEPPG 270
+P P+ EK+ P P P+ P + E+P K + ++PT + PP
Sbjct: 10027 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 10086
Query: 271 QLQVKAQP-QARMTVPKQTQT---------PDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 320
++ K +P + +P++ + ++LPE E +VLP + VL + +V +
Sbjct: 10087 KVPKKREPVPVPVALPQEEEVLFEEEIVPEEEVLPE--EEEVLPE-EEEVLPEEEEVLPE 10143
Query: 321 TQPRIPSTDTQVQPKLQ-KQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQ 379
+ IP + +V P+ + + + PE VL +V+P++ A P +++ +V +
Sbjct: 10144 -EEEIPPEEEEVPPEEEYVPEEEEFVPEEEVL--PEVKPKVPVPA-PVPEIKKKVTEKKV 10199
Query: 380 PSVQPQEHPPAQVSVQP-----------------PEQTHEQPHTQPQVSLLAPEQTPVVV 422
+ +E PPA+V P P + E+P +P PE+ P +
Sbjct: 10200 VIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIE 10259
Query: 423 HVCGLEMPPDAVEAGGGMEKTLPE 446
V + PP E ++K +PE
Sbjct: 10260 EVEEV-APPRVPEV---IKKAVPE 10279
Score = 51.2 bits (121), Expect = 4e-06
Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 14/210 (6%)
Query: 241 APEPEPCEASELPAKRLRSSEEPTE-KEPPGQLQVKAQPQARMT-VPKQTQTPDLLPEAL 298
A E E E + P K SE+ K+PP ++ + +P A++ VPK+ + +
Sbjct: 10427 AEEVEVFEKPKAPPKGPEISEKIIPPKKPPTKVVPRKEPPAKVPEVPKKIVVEEKVRVPE 10486
Query: 299 EAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQP 358
E +V P P VL + V + P P+ + P +A + PE V V P
Sbjct: 10487 EPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKV----PVPP 10542
Query: 359 QLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSL-LAPEQ 417
+ E P K P+V A P + E P + PPE P+ + AP +
Sbjct: 10543 PKKPEVPPTK--VPEVPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPK 10600
Query: 418 TPVVVHVCGLEMPPDAVEAGGGMEKTLPEP 447
P V V E P + V EK +P P
Sbjct: 10601 KPEVTPVKVPEAPKEVVP-----EKKVPVP 10625
Score = 51.2 bits (121), Expect = 4e-06
Identities = 72/325 (22%), Positives = 128/325 (39%), Gaps = 41/325 (12%)
Query: 129 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGP-----PPVGVPMNPSQFNLSGRNP-Q 182
+P + A P + P + + + L+ P PP VP P + +
Sbjct: 10706 APAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEVPKEVVPEKKVAVP 10765
Query: 183 KQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAP 242
K+ + P PV ++ E A P + E+ + E+IA E+ P P
Sbjct: 10766 KKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEEIAPEEEIAPEEEKPVP 10825
Query: 243 -----EPE--PCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTP---- 291
EPE P E P K + + P K+P + +P+ + PK P
Sbjct: 10826 VAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPP 10885
Query: 292 ------DLLPEALEAQVLPRFQ-PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQT 344
D+ + + + +P+ + P QV +V+ T ++P + +V+ KL + + +
Sbjct: 10886 PAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVE-LTPLKVPGGEKKVR-KLLPERKPEP 10943
Query: 345 SPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV-SVQPPEQTHEQ 403
E ++ K V + +E EP +V+P+ + + P+ PP V V+ P T +
Sbjct: 10944 KEEVVL---KSVLRKRPEEEEP--KVEPKKLEKVKKPAVPEPPPPKPVEEVEVPTVTKRE 10998
Query: 404 ---------PHTQPQVSLLAPEQTP 419
P +P + L APE P
Sbjct: 10999 RKIPEPTKVPEIKPAIPLPAPEPKP 11023
Score = 46.2 bits (108), Expect = 1e-04
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 69/300 (23%)
Query: 193 PNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQD--LPPCPEDIAKEKRTPAP-EPEPCEA 249
P + P E+K P EE P PE+ +P + K+ P P EPEP +
Sbjct: 10812 PEEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKV 10871
Query: 250 SELPAKRLRSSEEPTEKEPPGQ------LQVKAQPQARMTVPKQTQTPDLL--------- 294
E P +L+ P PP + Q+KA P+ + VP++ Q P+ +
Sbjct: 10872 IEKP--KLKPRPPPPPPAPPKEDVKEKIFQLKAIPKKK--VPEKPQVPEKVELTPLKVPG 10927
Query: 295 -------------PEALEAQVL------------PRFQPRVLQ-VQAQVQSQTQPRIPST 328
PE E VL P+ +P+ L+ V+ + P P
Sbjct: 10928 GEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKKPAVPEPPPPKPVE 10987
Query: 329 DTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEA-EPQKQVQPQVHTQAQPSVQPQEH 387
+ +V P + K+ + P + +++P + A EP+ + + +V T P V+P+
Sbjct: 10988 EVEV-PTVTKRERKIPEPTKV----PEIKPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPT 11042
Query: 388 P---PAQVSVQPPEQTHEQPH---TQPQVSLL-APEQTPVVVHV--------CGLEMPPD 432
P P V V + + P +P+ + P++TP + G E PPD
Sbjct: 11043 PIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKGVPKKTPSPIEAERRKLRPGSGGEKPPD 11102
Score = 45.4 bits (106), Expect = 2e-04
Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 60/316 (18%)
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAK----- 235
P K R +P E++ P E +EE E + E + PP E++ +
Sbjct: 10209 PAKVPEVPKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPR 10268
Query: 236 -----EKRTP-APEPEPCEASELPAKRLRSSEE-----PTEKE--PPGQLQ--VKAQPQA 280
+K P AP P P + PAK + E P +K+ PP ++ K P+
Sbjct: 10269 VPEVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEK 10328
Query: 281 RMTVPKQTQTPDLLPE-ALEAQVLPRFQPRVL---QVQAQVQSQTQPRIPSTDT--QVQP 334
++ VPK+ P LE +V F+ V+ +++ +V IP + +V+
Sbjct: 10329 KVLVPKKEAVPPAKGRTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEEEFHEVEE 10388
Query: 335 KLQ-----------KQAQTQTSPEHL---------VLQQKQVQPQLQQEAEPQ-KQVQPQ 373
+ K Q + EH V + ++V+ + +A P+ ++ +
Sbjct: 10389 YFEEGEFHEVEEFIKLEQHRVEEEHRVEKVHRVIEVFEAEEVEVFEKPKAPPKGPEISEK 10448
Query: 374 VHTQAQP--SVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPP 431
+ +P V P++ PPA+V P + E+ P+ + P + P V +PP
Sbjct: 10449 IIPPKKPPTKVVPRKEPPAKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEV-------LPP 10501
Query: 432 DAVEAGGGMEKTLPEP 447
V EK +P P
Sbjct: 10502 KEVVP----EKKVPVP 10513
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/262 (17%), Positives = 105/262 (40%), Gaps = 34/262 (12%)
Query: 217 RMDTPEDQDLPPCPEDIAKEKRTPAPEP---------------EPCEASELPAKRLRSSE 261
+++ P +P P+ I EK+ PAP P +P ++P K ++ E
Sbjct: 9571 KIEEPPPAKVPEAPKKIVPEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVPPKVIKMEE 9630
Query: 262 EPTEKEPPGQLQVKAQPQARMTVPKQTQTPD---------LLPEALEAQVLPRFQ----P 308
K +Q+ + + + V K+ P +PE ++ P+ +
Sbjct: 9631 PLPAKVTERHMQITQEEKVLVAVTKKEAPPKARVPEEPKRAVPEEKVLKLKPKREEEPPA 9690
Query: 309 RVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQK 368
+V + + +V + + I + + QP +++ + L+++ V Q ++E E +
Sbjct: 9691 KVTEFRKRVVKEEKVSIEAPKREPQP-IKEVTIMEEKERAYTLEEEAVSVQREEEYEEYE 9749
Query: 369 QVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQ--VSLLAPEQTPVVVHVCG 426
+ + + +P+ + ++ + + HE+ T+P+ + + + PV
Sbjct: 9750 EYDYKEFEEYEPTEEYDQYEEYEEREYERYEEHEEYITEPEKPIPVKPVPEEPVPTKP-- 9807
Query: 427 LEMPPDAVEAGGGMEKTLPEPV 448
+ PP V E+ +P P+
Sbjct: 9808 -KAPPAKVLKKAVPEEKVPVPI 9828
Score = 41.6 bits (96), Expect = 0.003
Identities = 53/265 (20%), Positives = 101/265 (38%), Gaps = 23/265 (8%)
Query: 198 MPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPE----PCEASELP 253
+P+ K +PP + P+ PE++ P P+ KE P PE P ++P
Sbjct: 9303 VPIPKKVEPP-APKVPEVPKKPVPEEKKPVPVPK---KEPAAPPKVPEVPKKPVPEEKIP 9358
Query: 254 AKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQV------LPRFQ 307
+ E P K P Q V + + + ++ P +PE + +V +PR +
Sbjct: 9359 VPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVPEERKPVPRKE 9418
Query: 308 PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQA---QTQTSPEHLVLQQKQVQPQLQQEA 364
V +V + + +P V + K+A + + S + +V +++ V + A
Sbjct: 9419 EEV-PPPPKVPALPKKPVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFA 9477
Query: 365 EPQKQVQPQVHTQAQPS-VQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVV- 422
PQ+ + A+ +E +SV E+ E+ + + E VV
Sbjct: 9478 VPQRVEVTRHEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEEYVVE 9537
Query: 423 ---HVCGLEMPPDAVEAGGGMEKTL 444
H+ + + E EK +
Sbjct: 9538 EKLHIISKRVEAEPAEVTERQEKKI 9562
Score = 40.8 bits (94), Expect = 0.005
Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 42/271 (15%)
Query: 192 TPNRKTMPVEDKSDPPEGSEEAAEP----RMDTPEDQDLPPCPEDIAKEKRTPAPEPEPC 247
T K +PV+ + P ++ A P + PE++ P P+ K P P P
Sbjct: 9787 TEPEKPIPVKPVPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPK-----KLKPPPPKVPE 9841
Query: 248 EASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTV-PKQTQTPDLLPEALEAQVLPRF 306
E ++ +++R S EKE QV +P A++ + PK+ + +P +PR
Sbjct: 9842 EPKKVFEEKIRISITKREKE-----QV-TEPAAKVPMKPKRVVAEEKVP-------VPR- 9887
Query: 307 QPRVLQVQAQVQSQTQPRIPSTDTQVQPK-LQKQAQTQTSPEHLVLQQKQVQPQLQQEAE 365
+V V R+P +++P+ + + + T E ++++++ ++E
Sbjct: 9888 ----KEVAPPV------RVPEVPKELEPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFI 9937
Query: 366 PQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVC 425
+++V P + + P V + P + V P++ P P+V E+ PV++
Sbjct: 9938 TEEEVVPVIPVKV-PEVPRKPVPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIP-- 9994
Query: 426 GLEMPPDA----VEAGGGMEKTLPEPVGTQV 452
E PP A V E+ +P PV +V
Sbjct: 9995 KKEKPPPAKVPEVPKKPVPEEKVPVPVPKKV 10025
Score = 38.1 bits (87), Expect = 0.034
Identities = 42/224 (18%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
P+ +AR+++ K + +E K PP+ + R+ P PE+I P
Sbjct: 8911 PRGEARSTAELYLTTKEIKLELK--PPD----IPDSRVPIPTMPIRAVPPEEIPPVVAPP 8964
Query: 241 APEPEPC-EASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALE 299
P P E + P KR+ +++ +K+ + + R + K+ P L
Sbjct: 8965 IPLLLPTPEEKKPPPKRIEVTKKAVKKDAKKVVAKPKEMTPREEIVKKPPPPTTL----- 9019
Query: 300 AQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQ 359
+P P ++ V ++ + I + ++QK+ + + V ++K+V +
Sbjct: 9020 ---IPAKAPEIIDVSSKAEEVKIMTITR-----KKEVQKEKEAVYEKKQAVHKEKRVFIE 9071
Query: 360 LQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQ 403
+E + +V+P QP + + ++ V+ ++ HE+
Sbjct: 9072 SFEEPYDELEVEPYTEPFEQPYYEEPDEDYEEIKVEAKKEVHEE 9115
Score = 36.2 bits (82), Expect = 0.13
Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 57/340 (16%)
Query: 208 EGSEEAAEPRMDTPEDQDLPPCPEDI---AKEKRTPAPEPE---PCEASELPAKRLRSSE 261
EG +E E + +++++ +++ + E++ PA PE P + + E
Sbjct: 9131 EGYDEGEEEWEEAYQEREVIQVQKEVYEESHERKVPAKVPEKKAPPPPKVIKKPVIEKIE 9190
Query: 262 EPTEKEPPGQLQVKAQPQ-ARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 320
+ + + ++QV P+ ++ VP++ + E +E +V P V + + +
Sbjct: 9191 KTSRRMEEEKVQVTKVPEVSKKIVPQKPSRTPVQEEVIEVKV-----PAVHTKKMVISEE 9245
Query: 321 TQPRIPSTDTQVQ---PKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQ 377
T+ +V P++QK+ T+ V K+V+P + P+K +V
Sbjct: 9246 KMFFASHTEEEVSVTVPEVQKEIVTEEKIH--VAISKRVEPPPKVPELPEKPAPEEVAPV 9303
Query: 378 AQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAG 437
P P + P ++P P+ AP + P E+P V
Sbjct: 9304 PIPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVP--------EVPKKPVP-- 9353
Query: 438 GGMEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDS 497
E+ +P PV + + A V E + G K+TI+ +
Sbjct: 9354 ---EEKIPVPVA--------KKKEAPPAKVPEVQK---------GVVTEEKITIVTQREE 9393
Query: 498 RAFSTVP----------LTPVPRPSDSVSSTPAATSTPSK 527
VP PVPR + V P + P K
Sbjct: 9394 SPPPAVPEIPKKKVPEERKPVPRKEEEVPPPPKVPALPKK 9433
Score = 35.8 bits (81), Expect = 0.17
Identities = 34/191 (17%), Positives = 77/191 (40%), Gaps = 7/191 (3%)
Query: 215 EPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQV 274
EPR + +L ++I E + P +P + + E P PP L +
Sbjct: 8910 EPRGEARSTAELYLTTKEIKLELKPPDIPDSRVPIPTMPIRAVPPEEIPPVVAPPIPLLL 8969
Query: 275 KAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQP 334
P+ + PK+ + + +V+ + P+ + + ++ + P T +
Sbjct: 8970 PT-PEEKKPPPKRIEVTKKAVKKDAKKVVAK--PKEMTPREEIVKKPPP----PTTLIPA 9022
Query: 335 KLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSV 394
K + + E + + + ++Q+E E + + VH + + ++ E P ++ V
Sbjct: 9023 KAPEIIDVSSKAEEVKIMTITRKKEVQKEKEAVYEKKQAVHKEKRVFIESFEEPYDELEV 9082
Query: 395 QPPEQTHEQPH 405
+P + EQP+
Sbjct: 9083 EPYTEPFEQPY 9093
Score = 35.8 bits (81), Expect = 0.17
Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 29/279 (10%)
Query: 129 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS 188
SP A P + P+ P ++ P+ + PPP VP P + P + + +
Sbjct: 9394 SPPPAVPEI--PKKKVPEERKPVPRKEEEV---PPPPKVPALP-------KKPVPEEKVA 9441
Query: 189 SSTTPNRKTMPVE---DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPE 245
+K P K E AE ++ Q + +++ E+ E E
Sbjct: 9442 VPVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEVSAEEEWSYSEEE 9501
Query: 246 PCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPR 305
E + R EE E E + +V +P+ V ++ EA A+V R
Sbjct: 9502 --EGVSISVYREEEREEEEEAEVT-EYEVMEEPE-EYVVEEKLHIISKRVEAEPAEVTER 9557
Query: 306 FQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAE 365
+ +++ +P+IP+ + P +A + PE V + ++
Sbjct: 9558 QEKKIV---------LKPKIPAKIEEPPPAKVPEAPKKIVPEKKVPAPVPKKEKVPPPKV 9608
Query: 366 PQKQVQPQVHTQAQPSVQPQEHP-PAQVSVQPPEQTHEQ 403
P++ +P + P V E P PA+V+ + + T E+
Sbjct: 9609 PEEPKKPVPEKKVPPKVIKMEEPLPAKVTERHMQITQEE 9647
Score = 34.3 bits (77), Expect = 0.49
Identities = 49/266 (18%), Positives = 104/266 (39%), Gaps = 20/266 (7%)
Query: 130 PGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSS 189
P + P PP+ P + + L P P P P + ++ + Q +A
Sbjct: 10853 PVIKKPEAPPPKEPEPE------KVIEKPKLKPRPPPPPPAPPKEDVKEKIFQLKA-IPK 10905
Query: 190 STTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKE--KRTPAPEPEPC 247
P + +P + + P + + R PE + P E + K ++ P E
Sbjct: 10906 KKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPK-EEVVLKSVLRKRPEEEEPKV 10964
Query: 248 EASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQ 307
E +L + + EP +P +++V + +P+ T+ P++ P A LP +
Sbjct: 10965 EPKKLEKVKKPAVPEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIKP----AIPLPAPE 11020
Query: 308 PRVLQVQAQVQSQTQPRIPSTDTQVQ-----PKLQKQAQTQTSPEHLVLQQKQVQPQLQQ 362
P+ + +A+V++ P + T + P + K+A+ + E + ++ ++
Sbjct: 11021 PKP-KPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKGVPKK 11079
Query: 363 EAEPQKQVQPQVHTQAQPSVQPQEHP 388
P + + ++ + P E P
Sbjct: 11080 TPSPIEAERRKLRPGSGGEKPPDEAP 11105
Score = 32.3 bits (72), Expect = 1.9
Identities = 55/290 (18%), Positives = 101/290 (34%), Gaps = 30/290 (10%)
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
P K T K + K + P + EP+ PE++ L K KR
Sbjct: 9633 PAKVTERHMQITQEEKVLVAVTKKEAPPKARVPEEPKRAVPEEKVLK------LKPKREE 9686
Query: 241 APEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEA 300
P + E + K + S E ++EP QP +T+ ++ + L E EA
Sbjct: 9687 EPPAKVTEFRKRVVKEEKVSIEAPKREP--------QPIKEVTIMEEKERAYTLEE--EA 9736
Query: 301 QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL 360
+ R + + + + Q + +++ + E + + ++ P
Sbjct: 9737 VSVQREEEYEEYEEYDYKEFEEYEPTEEYDQYEEYEEREYERYEEHEEYITEPEKPIPVK 9796
Query: 361 QQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQ---PPEQTHEQP----HTQPQVSLL 413
EP + P+E P + + PP + E+P + ++S+
Sbjct: 9797 PVPEEPVPTKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKVFEEKIRISIT 9856
Query: 414 APEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEP---VGTQVSMEEIQNE 460
E+ V + M P V A E+ +P P V V + E+ E
Sbjct: 9857 KREKEQVTEPAAKVPMKPKRVVA----EEKVPVPRKEVAPPVRVPEVPKE 9902
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 63.2 bits (152), Expect = 1e-09
Identities = 77/299 (25%), Positives = 109/299 (36%), Gaps = 45/299 (15%)
Query: 189 SSTTPNRKTMPVEDKSDPPEGSEEAAEPRM------DTPEDQDLPPCPEDIAKEKRTPAP 242
+S +KT P +DP +E + PR P LP P +++ T P
Sbjct: 339 ASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQP 398
Query: 243 EPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEAL--EA 300
P+ +S P L S +P + PP Q + Q + P QTP + L +A
Sbjct: 399 PPQAAGSSNQPGL-LASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQA 457
Query: 301 QVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK----LQKQAQTQT------------ 344
Q P+ Q ++ Q Q Q Q P Q QP Q+QAQTQ
Sbjct: 458 QATPQHQQQLFLKQQQQQQQPPP------AQQQPAGTFYQQQQAQTQQFQAVHPATQQPA 511
Query: 345 ----------SPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQP--QEHPPAQV 392
+ ++Q Q Q QQ+ + Q+Q+ +H Q + Q Q+ P
Sbjct: 512 IAQFPVVSQGGSQQQLMQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAA 571
Query: 393 SVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQ 451
QP Q P QP + Q PV PP AV+ T P TQ
Sbjct: 572 GQQPQPQPAAAP--QPAPAQEPAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPPSSPKTQ 628
Score = 55.8 bits (133), Expect = 2e-07
Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 229 CPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQV--KAQPQARMTVPK 286
CP + PA PEP +ASE AK+ + T+ P + + + +P+A T P
Sbjct: 319 CPIPNVQNSPIPAKLPEPVKASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQTQP- 377
Query: 287 QTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKL---------- 336
P +LP ++ + PR + V S QP + ++ Q +P+
Sbjct: 378 ---NPGILP--IQPALTPRKRATVQPPPQAAGSSNQPGLLASVPQPKPQAPPSQPLPQTQ 432
Query: 337 QKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQP--QEHPPAQVSV 394
KQ Q +P+ Q Q P Q +A PQ Q Q + Q Q P Q+ P
Sbjct: 433 AKQPQAPPTPQQTPSTQAQGLP-AQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFYQ 491
Query: 395 QPPEQTHEQPHTQPQVSLLAPEQTPVV 421
Q QT + P A Q PVV
Sbjct: 492 QQQAQTQQFQAVHPATQQPAIAQFPVV 518
Score = 50.8 bits (120), Expect = 5e-06
Identities = 31/67 (46%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQA------PLPMAVSR 57
QQ Q QQQQQ QQ QQQQ L QQQL+ Q LQQ P A P P A +
Sbjct: 525 QQLMQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQ 584
Query: 58 GLPPQQP 64
P Q+P
Sbjct: 585 PAPAQEP 591
Score = 39.7 bits (91), Expect = 0.012
Identities = 68/236 (28%), Positives = 87/236 (36%), Gaps = 36/236 (15%)
Query: 5 QQQQQLQQQQQQLQQLQQQQ------LQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRG 58
QQQ L+QQQQQ Q QQ QQQQ Q QQ + QQ P A P+ G
Sbjct: 464 QQQLFLKQQQQQQQPPPAQQQPAGTFYQQQQAQTQQFQAVHPATQQ-PAIAQFPVVSQGG 522
Query: 59 LPP-------QQPQQPLLNLQGTNSASLLNGS--MLQRALLL--------QQLQGLDQFA 101
QQ QQ Q A+ L+ M Q+A L QQ Q A
Sbjct: 523 SQQQLMQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAA 582
Query: 102 MPPATYDTAGLTMPTATLGNLRGY-GMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLL 160
PA + P ++ A G SLTPP ++P Q+ + +
Sbjct: 583 PQPAPAQEPAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPP--SSPKTQRAGHRRILSDVT 640
Query: 161 GPPPVGVPMNPSQFNL------SGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGS 210
GVP + S L + N K A T+ S +P V +P EGS
Sbjct: 641 HSAVFGVPASKSTQLLQAAAAEASLNKSKSATTTPSGSPRTSQQNV---YNPSEGS 693
Score = 30.0 bits (66), Expect = 9.3
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQ-----QLQQQQLLQLQQLLQQSPPQAPLPMAVSR 57
+Q +Q Q QQ Q Q L Q Q QQQ L+ QQ QQ PP P
Sbjct: 431 TQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFY 490
Query: 58 GLPPQQPQQ 66
Q QQ
Sbjct: 491 QQQQAQTQQ 499
>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
Length = 1227
Score = 62.8 bits (151), Expect = 1e-09
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 634 KTPRKFVEHVKSQGH-KDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDE 692
+ P FV+ K++G +D A E LE++ + E + C E E +
Sbjct: 1057 RQPSPFVDDCKTRGTPEDGACEGSPLEEKASPPIETD---LQNQACQEVLTPENSRYVEM 1113
Query: 693 EEIEVEEELCKQVRSRD-ISREEWKGSETYSP-NTAYGVDFLVPVMGYICRICHKFYHSN 750
+ +EV +V + +S W+ + +S + GV+F+VP G+ C++C FY S
Sbjct: 1114 KSLEVRSPEYTEVELKQPLSLPSWEPEDVFSELSIPLGVEFVVPRTGFYCKLCGLFYTSE 1173
Query: 751 SGAQLSHCKSLGHFENLQKY 770
A++SHC+S H+ NLQKY
Sbjct: 1174 ETAKMSHCRSAVHYRNLQKY 1193
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 62.8 bits (151), Expect = 1e-09
Identities = 67/306 (21%), Positives = 117/306 (38%), Gaps = 45/306 (14%)
Query: 203 KSDPPEGSE--EAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSS 260
+SD EG E EA E + P D + + PE E EA E + S
Sbjct: 1828 QSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPES 1887
Query: 261 EEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQ 320
E+ E ++Q +++ K+ Q EALE + +
Sbjct: 1888 EDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETE-----------------GE 1930
Query: 321 TQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQ--- 377
+P + Q + ++A+ QT PE V++ ++ + + Q E+E + ++ +V TQ
Sbjct: 1931 DEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAE 1990
Query: 378 --AQPSVQPQEHPPAQ----------------VSVQPPEQTHEQPHTQPQVSLLAPEQTP 419
AQP + E P A+ V QP + E + + + P
Sbjct: 1991 GEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQP 2050
Query: 420 VVVHVCGLEMPPDAVEAGGGMEKTLPE--PVGTQVSMEEIQNES---ACGLDVGECENRA 474
V E +A EA G +++ E P V +E + E+ + G++ E E A
Sbjct: 2051 ESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEA 2110
Query: 475 REMPGV 480
++ G+
Sbjct: 2111 QKAEGI 2116
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 18/245 (7%)
Query: 181 PQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTP 240
P+ + + + VE ++ EG + ++ PE ++ E +E
Sbjct: 2018 PESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGE 2077
Query: 241 A-PEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALE 299
A PE E +A E + SE E G+ Q KA+ + Q EA E
Sbjct: 2078 AHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQ-KAEGIEAPETEGEAQPESEGIEAPE 2136
Query: 300 AQVLPRFQPRVLQVQAQ-VQSQTQPRIPSTDTQ-----VQPKLQ----KQAQTQTSPEHL 349
A+ QP V+AQ + + QP + Q QP+L+ +A+ + PE
Sbjct: 2137 AE--GEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESE 2194
Query: 350 VLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQ--THEQPHTQ 407
++ + + + Q E E + P+ +AQP + E P A+ QP + T +
Sbjct: 2195 GIEAPEAEGEAQPELEGVEA--PEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGS 2252
Query: 408 PQVSL 412
PQVSL
Sbjct: 2253 PQVSL 2257
Score = 48.5 bits (114), Expect = 3e-05
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 24/244 (9%)
Query: 199 PVEDKSDPPEGSEEAAEPRMDTPEDQ-DLPPCPEDI-AKEKRTPA-PEPEPCEASELP-- 253
P D + PE EEA E + E + + P ED+ A+E A PE E EA E
Sbjct: 2050 PESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGE 2109
Query: 254 ---AKRLRSSEEPTEKEPPGQ------LQVKAQPQARMTVPKQTQTPDLLPEA--LEAQV 302
A+ + + E E +P + + +AQP++ V Q + PE+ +EAQ
Sbjct: 2110 AQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESE-GVEAQDAEGEAQPESEGIEAQE 2168
Query: 303 LPR-FQPRVLQVQA-QVQSQTQPR-----IPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQ 355
QP + V+A + + + QP P + + QP+L+ + E +
Sbjct: 2169 AEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGV 2228
Query: 356 VQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAP 415
P+ + EA+P+ + + Q + P V + + S ++P P P
Sbjct: 2229 ETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGDTP 2288
Query: 416 EQTP 419
Q P
Sbjct: 2289 HQRP 2292
Score = 45.1 bits (105), Expect = 3e-04
Identities = 87/437 (19%), Positives = 157/437 (35%), Gaps = 64/437 (14%)
Query: 182 QKQARTSSSTTPNRK--TMPVEDKSDPPEGSEEAAEPRMDTPE--DQDLPPCPEDIAKEK 237
+ Q + TP + P + ++ PE +EA +P ++ E + + PE E
Sbjct: 1882 EAQPESEDVETPEAEWEVQPESEGAEAPEAEKEA-QPETESVEALETEGEDEPESEGAEA 1940
Query: 238 RTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEA 297
+ + E P + S+E E+ P V+A + V Q + PE+
Sbjct: 1941 QEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEA---LEVEVETQEAEGEAQPES 1997
Query: 298 LEAQVLPRFQPRVLQVQAQVQSQT-----QPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQ 352
+ + P + + + + + Q ++ QP+ + Q ++ + PE ++
Sbjct: 1998 EDVEA-PEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVE 2056
Query: 353 QKQVQPQLQQEAEPQKQVQPQVHT------------QAQPSVQPQEHPPAQVSVQPPEQT 400
+ + + Q+ ++ + + H +AQP + E P A+ Q E
Sbjct: 2057 APEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGI 2116
Query: 401 HEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDA--VEAGGGMEKTLPEPVG--TQVSMEE 456
E P T+ + PE + E P++ VEA + PE G Q + EE
Sbjct: 2117 -EAPETEGEAQ---PESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEE 2172
Query: 457 IQNESACGLDVGECENRAR-EMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSV 515
Q E G++ E E A+ E G+ ++ A + P +
Sbjct: 2173 AQPELE-GVEAPEAEGEAQPESEGIEA----------PEAEGEAQPELEGVEAPEAEEEA 2221
Query: 516 SSTPAATSTPSKQALQFFCYICKASCSSQQEFQ-DHMSEPQHQQRLGEIQHMSQACLLSL 574
P TP + +A S+ E Q + PQ G+ + S+ S
Sbjct: 2222 QPEPEGVETPEAEG--------EAQPESEGETQGEKKGSPQVSLGDGQSEEASE----SS 2269
Query: 575 LPVPRDVLETEDEEPPP 591
PVP D PPP
Sbjct: 2270 SPVPED-----RPTPPP 2281
Score = 30.0 bits (66), Expect = 9.3
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 640 VEHVKSQGHKD------KAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEE 693
VE ++++G + +A+E + +E GQ + +++ E +EE + + ED E
Sbjct: 1922 VEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQ---EAEEEAQPESEDVE 1978
Query: 694 EIEVEEELCK-----QVRSRDISREEWKG 717
+EVE E + Q S D+ E +G
Sbjct: 1979 ALEVEVETQEAEGEAQPESEDVEAPEAEG 2007
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 62.4 bits (150), Expect = 2e-09
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 26/251 (10%)
Query: 178 GRNPQKQARTSSSTTPNRKTMPVEDKSDP-------PEGSEEAAEPRMDTPEDQDLPPCP 230
G P + S + + P E S P P G+ E AE P ++L
Sbjct: 36 GPGPDTLSGGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEIAEETR--PGQREL---- 89
Query: 231 EDIAKEKRTPAPEPEPC-EASELPAKRLRSSEEPTEKEPPGQLQV-KAQPQARMTVPKQT 288
+ + ++ P P+ +P E + P L ++P + GQ Q+ + Q + +V Q
Sbjct: 90 -QLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQD---GQQQLSQLQQEKHQSVHHQE 145
Query: 289 QTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTS-PE 347
P+L + Q+ QP+ +Q Q ++Q Q Q ++ + Q Q LQ+Q Q Q E
Sbjct: 146 LKPELQLMHQQQQL----QPQQVQEQQRLQQQ-QEQLQTQQAQEQQVLQQQEQLQQQVQE 200
Query: 348 HLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEH-PPAQVSVQPPEQTHEQPHT 406
+LQQ+Q Q Q QQ + Q+Q+Q Q Q Q +Q Q+ Q Q +Q +Q
Sbjct: 201 QQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQA 260
Query: 407 QPQVSLLAPEQ 417
Q Q LL +Q
Sbjct: 261 QLQQQLLEQQQ 271
Score = 59.3 bits (142), Expect = 1e-08
Identities = 50/107 (46%), Positives = 59/107 (55%), Gaps = 19/107 (17%)
Query: 5 QQQQQLQQQ-------QQQLQQLQQQQL--QQQQLQQQQLLQLQQLLQQSPPQAPLPMAV 55
QQQ+QLQQQ QQQ +QLQQQQL QQ+QLQQQQ Q Q+ LQQ Q L +
Sbjct: 189 QQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQ---QQQLLLLQ 245
Query: 56 SRGLPPQQPQQPLLNLQGTNSASLL---NGSMLQRALLLQQLQGLDQ 99
+G Q QQ LL Q L + LQ+ LLLQQ + L Q
Sbjct: 246 QQG----QLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQ 288
Score = 57.4 bits (137), Expect = 5e-08
Identities = 40/96 (41%), Positives = 47/96 (48%)
Query: 1 MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
M QQQ Q Q Q+QQ Q QQ+QLQ QQ Q+QQ+LQ Q+ LQQ + L L
Sbjct: 153 MHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQ 212
Query: 61 PQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQG 96
QQ Q LQ Q+ LLL Q QG
Sbjct: 213 QQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQG 248
Score = 57.0 bits (136), Expect = 7e-08
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 230 PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQL--QVKAQPQARMTVPKQ 287
P+ + +++R + + + L+ E+ ++ QL Q + Q Q + + +Q
Sbjct: 161 PQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQ 220
Query: 288 TQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPE 347
Q + + Q+ + Q +LQ Q Q+Q Q + Q+Q +L +Q Q Q +
Sbjct: 221 EQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQL---LQQQQAQLQQQLLEQQQAQLQQQ 277
Query: 348 HLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQ 407
L+ QQ+Q+Q Q QQ+ Q+Q Q Q P ++P+E ++ + P + EQ Q
Sbjct: 278 LLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQ 337
Query: 408 PQVSL 412
+ L
Sbjct: 338 QRQEL 342
Score = 57.0 bits (136), Expect = 7e-08
Identities = 35/66 (53%), Positives = 40/66 (60%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQQQ+QLQQQQQ L QQ QLQQQ LQQQQ QQLL+Q Q + + + QQ
Sbjct: 229 QQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQ 288
Query: 64 PQQPLL 69
QQ L
Sbjct: 289 QQQQQL 294
Score = 55.5 bits (132), Expect = 2e-07
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 171 PSQFNLSGRNPQKQARTSSS-----TTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQ- 224
P + N S + P A +S T P ++ + ++ PE ++ ++ P+
Sbjct: 57 PQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHL 116
Query: 225 DLPPCPEDIAKEKRTPAPEPEPCEASELPAK-RLRSSEEPTEKEPPG-QLQVKAQPQARM 282
+L P+ +++ + + + K L+ + + +P Q Q + Q Q
Sbjct: 117 ELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQ 176
Query: 283 TVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQT 342
+Q Q +L + + Q + Q + Q Q Q+Q Q Q Q Q Q+Q Q
Sbjct: 177 LQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQ-QLLQQQEQLQQQQFQQQQEQL 235
Query: 343 QTSPEHLVLQQK-QVQPQL--QQEAEPQKQV--QPQVHTQAQPSVQPQEHPPAQVSVQPP 397
Q + L+LQQ+ Q+Q QL QQ+A+ Q+Q+ Q Q Q Q +Q QE Q Q
Sbjct: 236 QQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLL 295
Query: 398 EQTHEQ-PHTQPQVSLLAPEQ 417
+Q EQ Q Q L PE+
Sbjct: 296 QQQQEQLQQQQLQPPPLEPEE 316
Score = 54.7 bits (130), Expect = 4e-07
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 5 QQQQQLQQQQQQLQ--QLQQQQL--QQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSR--G 58
Q+QQ+LQQQQ+QLQ Q Q+QQ+ QQ+QLQQQ +Q QQLLQQ Q + +
Sbjct: 165 QEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQ--VQEQQLLQQQQEQLQQQQLLQQQEQ 222
Query: 59 LPPQQPQQPLLNLQGTNSASLL-NGSMLQRALLLQQLQGLDQ 99
L QQ QQ LQ LL LQ+ LL QQ L Q
Sbjct: 223 LQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQ 264
Score = 51.6 bits (122), Expect = 3e-06
Identities = 39/69 (56%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 5 QQQQQLQQQ--QQQLQQLQQQQLQQQ--QLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLP 60
QQQ QLQQQ QQQ QLQQQ L+QQ QLQQQ LLQ Q+ LQQ Q L + L
Sbjct: 245 QQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQ-LQ 303
Query: 61 PQQPQQPLL 69
QQ Q P L
Sbjct: 304 QQQLQPPPL 312
Score = 49.7 bits (117), Expect = 1e-05
Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 3 SQQQQQQLQQQQQQLQQ--LQQQQLQQQQLQQQQLLQLQQ-LLQQSPPQAPLPMAVSRGL 59
+Q QQQ L+QQQ QLQQ L QQQ Q QQ QQQQLLQ QQ LQQ Q P L
Sbjct: 260 AQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPP-------PL 312
Query: 60 PPQQPQQPLLNLQGTNSAS 78
P++ ++ L L + S
Sbjct: 313 EPEEEEEVELELMPVDLGS 331
Score = 43.9 bits (102), Expect = 6e-04
Identities = 47/255 (18%), Positives = 104/255 (40%), Gaps = 11/255 (4%)
Query: 169 MNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPP 228
+ P Q R Q+Q + + ++ + +++ ++ + + + + Q L
Sbjct: 159 LQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQ 218
Query: 229 CPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKA--QPQARMTVPK 286
E + +++ E + L ++ ++ ++ QLQ + Q QA++
Sbjct: 219 QQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQL 278
Query: 287 QTQTPDLLPEALEAQVLPRFQPRVLQVQAQV-------QSQTQPRIPSTDTQVQPKLQKQ 339
Q + L + + Q+L + Q ++ Q Q Q + + + + D + +L++Q
Sbjct: 279 LLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQ 338
Query: 340 AQTQTSPEHLVLQQ--KQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPP 397
Q + L QQ +Q+Q +LQ+E + +Q Q Q + E P ++ Q
Sbjct: 339 RQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQ 398
Query: 398 EQTHEQPHTQPQVSL 412
E E QP++ L
Sbjct: 399 EVQLELTPVQPELQL 413
Score = 42.7 bits (99), Expect = 0.001
Identities = 91/420 (21%), Positives = 155/420 (36%), Gaps = 48/420 (11%)
Query: 12 QQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNL 71
Q++ QLQQL+QQ QQQ Q +QL Q P P + P Q QQ L L
Sbjct: 86 QRELQLQQLEQQPEPQQQPQHEQL------------QQPQPHLELQQQPQQDGQQQLSQL 133
Query: 72 QGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGNLRGYGMASPG 131
Q S+ + + L+ Q Q L P + L L +
Sbjct: 134 QQEKHQSVHHQELKPELQLMHQQQQL----QPQQVQEQQRLQQQQEQLQTQQ--AQEQQV 187
Query: 132 LAAPSLTPPQLATPN-LQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSS 190
L Q+ LQQ Q +Q LL + QF Q+Q +
Sbjct: 188 LQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQE---QLQQQQFQQQQEQLQQQQQLLLL 244
Query: 191 TTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEAS 250
+ + + + ++ E + + Q L E + ++++ + +
Sbjct: 245 QQQGQLQQQLLQQQQ-AQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQ---QQE 300
Query: 251 ELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRV 310
+L ++L+ P E E +++++ P + + + + E Q L R Q
Sbjct: 301 QLQQQQLQ--PPPLEPEEEEEVELELMP---VDLGSEQELEQQRQELERQQELER-QQEQ 354
Query: 311 LQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQV 370
Q+Q ++Q + Q + Q Q Q++ Q + +P L QQ++VQ +L V
Sbjct: 355 RQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLEL-------TPV 407
Query: 371 QPQVHTQAQPSV----QPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCG 426
QP++ + P+ PA V V PP Q ++ +L P VV + G
Sbjct: 408 QPELQLELVPAAGGGGAAVPGAPAAVVVAPPGYVVVQ-----ELMVLPAVAAPAVVAIPG 462
Score = 42.4 bits (98), Expect = 0.002
Identities = 42/111 (37%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQL-------------QQQQLQQQQLLQLQQLLQQSPPQAP 50
QQ QQ QQQ QLQQ + Q + QQQQLQ QQ+ Q QQ LQQ Q
Sbjct: 120 QQPQQDGQQQLSQLQQEKHQSVHHQELKPELQLMHQQQQLQPQQV-QEQQRLQQQQEQLQ 178
Query: 51 LPMAVSRGLPPQQPQQPLLNLQGTNSASLL--NGSMLQRALLLQQLQGLDQ 99
A + + QQ Q Q LL LQ+ LLQQ + L Q
Sbjct: 179 TQQAQEQQVLQQQEQLQ----QQVQEQQLLQQQQEQLQQQQLLQQQEQLQQ 225
Score = 42.4 bits (98), Expect = 0.002
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQ---QQQLQQ--QQLLQLQQLLQQSPPQAPLPMAVSRG 58
+QQ+Q+L++QQ+ +Q +Q+QLQ Q++LQQ QQL Q QQ L+Q Q L V G
Sbjct: 336 EQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLEL-TPVELG 394
Query: 59 LPPQQPQQPLLNLQ 72
Q+ Q L +Q
Sbjct: 395 AQQQEVQLELTPVQ 408
Score = 31.6 bits (70), Expect = 3.2
Identities = 47/175 (26%), Positives = 64/175 (36%), Gaps = 47/175 (26%)
Query: 4 QQQQQQLQQQQQQLQQLQQQ----------------------------------QLQQQQ 29
QQQQQ LQQQQ+QLQQ Q Q + QQ+
Sbjct: 289 QQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQEL 348
Query: 30 LQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRAL 89
+QQ+ QLQ LQ+ Q + + L QQ Q +Q + L + L
Sbjct: 349 ERQQEQRQLQLKLQEELQQ------LEQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQL 402
Query: 90 LLQQLQGLDQFAMPPATYDTAGLT--MPTATLGNLRGYG-----MASPGLAAPSL 137
L +Q Q + PA P A + GY M P +AAP++
Sbjct: 403 ELTPVQPELQLELVPAAGGGGAAVPGAPAAVVVAPPGYVVVQELMVLPAVAAPAV 457
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 61.6 bits (148), Expect = 3e-09
Identities = 45/98 (45%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQ-----QQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRG 58
QQQQQQ QQQQQQ QQ QQQQ Q QQQ QQQ + QQ QQ Q +
Sbjct: 599 QQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQ 658
Query: 59 LPPQQPQQPLLNLQGTNSASLLNGSM-LQRALLLQQLQ 95
QQ Q Q S LL + LQ+ LLLQQ+Q
Sbjct: 659 QQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQ 696
Score = 59.3 bits (142), Expect = 1e-08
Identities = 106/498 (21%), Positives = 178/498 (35%), Gaps = 102/498 (20%)
Query: 129 SPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTS 188
SPGL PQL P+ F A P VP + +Q PQ + S
Sbjct: 369 SPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQ-------PQTGSGAS 421
Query: 189 SSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCE 248
+ ++ + ++ A + + Q P + + + P P P
Sbjct: 422 RALPSWQEVSHAQQLKQIAANRQQHARMQQHQQQHQ-----PTNWSALPSSAGPSPGPFG 476
Query: 249 ASELPAKRL-------RSSEEPTEKEPPGQLQV------KAQPQAR---MTVPKQTQTPD 292
++P+ +SS P GQ +V KA P A+ + V Q Q P
Sbjct: 477 QEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQ-QKPQ 535
Query: 293 LLPEALEAQVLPRFQPRV---------------LQVQAQVQSQTQPRIPSTDTQVQPKLQ 337
L + P +PR Q+ + + SQ +P + Q Q + Q
Sbjct: 536 DLSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQ 595
Query: 338 KQAQTQTSPEHLVLQQKQVQPQLQQE----AEPQKQVQPQVHTQAQPSVQPQEHPPAQVS 393
+Q Q Q + QQ+Q Q Q QQ+ A+ Q+Q Q + Q Q Q Q+ Q
Sbjct: 596 QQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQ 655
Query: 394 VQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVS 453
Q +Q +QP +QP SL P Q P++ P P+ ++
Sbjct: 656 QQQQQQQQQQPSSQPAQSL--PSQ-PLL---------------------RSPLPLQQKLL 691
Query: 454 MEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSD 513
++++QN+ G+ + + ++ V G P P P+
Sbjct: 692 LQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTG--------------------PSPSPNP 731
Query: 514 SVSSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLS 573
+ + S+Q+L + + +Q Q + E Q QQ L + Q ++ A ++
Sbjct: 732 CSNPNTGSGYMNSQQSL-----LNQQLMGKKQTLQRQIME-QKQQLLLQQQMLADAEKIA 785
Query: 574 LLPVPRDVLETEDEEPPP 591
P+D + PPP
Sbjct: 786 ----PQDQINRHLSRPPP 799
Score = 52.0 bits (123), Expect = 2e-06
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 6 QQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQ 65
QQQQ QQQQQQ QQ QQQQ QQQQ QQ Q L Q ++PLP+ + L Q
Sbjct: 639 QQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQ-QKLLLQQMQN 697
Query: 66 QPLLNL 71
QP+ +
Sbjct: 698 QPIAGM 703
Score = 45.8 bits (107), Expect = 2e-04
Identities = 79/331 (23%), Positives = 110/331 (33%), Gaps = 18/331 (5%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQ 62
SQ + L QQQ QQ QQQQ QQQQ QQQQ Q QQ QQ S Q
Sbjct: 577 SQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS-------SISAQQQ 629
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAG-LTMPTATLGN 121
Q QQ ++ Q Q+ QQ Q + P + + L P
Sbjct: 630 QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQK 689
Query: 122 LRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNP 181
L M + +A Q + Q T S P P P S + S ++
Sbjct: 690 LLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPS-PSPNPCSNPNTGSGYMNSQQSL 748
Query: 182 QKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQ---DLPPCPEDIAKEKR 238
Q T R+ M E K + A+ P+DQ L P D K++R
Sbjct: 749 LNQQLMGKKQTLQRQIM--EQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDY-KDQR 805
Query: 239 TPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEAL 298
+P + + + P + + ++ T+ P L
Sbjct: 806 RNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQ 865
Query: 299 EAQV---LPRFQPRVLQVQAQVQSQTQPRIP 326
+ LP QP V + + TQ R P
Sbjct: 866 NMGMYGNLPCNQPNTYSVTSGMNQLTQQRNP 896
Score = 35.4 bits (80), Expect = 0.22
Identities = 29/97 (29%), Positives = 35/97 (36%)
Query: 3 SQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQ 62
+QQ L Q + QQ QQQQ QQQQ Q QQ QQ Q + Q
Sbjct: 568 NQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQ 627
Query: 63 QPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQ 99
Q QQ ++ Q+ QQ Q Q
Sbjct: 628 QQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQ 664
Score = 33.1 bits (74), Expect = 1.1
Identities = 75/411 (18%), Positives = 149/411 (36%), Gaps = 56/411 (13%)
Query: 6 QQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQ 65
Q+ QQ +Q+ +QQ + QQ QQQ L S +P P + P Q
Sbjct: 428 QEVSHAQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQ 487
Query: 66 Q-------PLLNLQGTNSASLLNGSMLQRALLLQQLQGLD-QFAMPPATYDTAGLTMPTA 117
Q P+ + G + S + + + +A Q LD P + + P
Sbjct: 488 QTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNP-- 545
Query: 118 TLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLS 177
P++ P Q T L F Q + P + PS + +
Sbjct: 546 ----------------HPAMEPRQGNTKPLFHFNSDQANQQM--PSVLPSQNKPSLLHYT 587
Query: 178 GRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEK 237
+ Q+Q + ++ + + + + + + + I+ ++
Sbjct: 588 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQ-------SSISAQQ 640
Query: 238 RTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEA 297
+ + + + + ++ + ++P+ + P Q + +QP R +P Q + LL +
Sbjct: 641 QQQQQQQQQQQQQQQQQQQQQQQQQPSSQ--PAQ-SLPSQPLLRSPLPLQQK---LLLQQ 694
Query: 298 LEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQ 357
++ Q + +V +Q Q Q Q + +T P + T ++ QQ +
Sbjct: 695 MQNQPIAGMGYQV----SQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSLLN 750
Query: 358 PQ-------LQQEAEPQKQ---VQPQVHTQAQPSVQPQEHPPAQVSVQPPE 398
Q LQ++ QKQ +Q Q+ A+ + PQ+ +S PP+
Sbjct: 751 QQLMGKKQTLQRQIMEQKQQLLLQQQMLADAE-KIAPQDQINRHLSRPPPD 800
Score = 33.1 bits (74), Expect = 1.1
Identities = 75/332 (22%), Positives = 126/332 (37%), Gaps = 41/332 (12%)
Query: 2 FSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLL---QQSPPQAPLPMAVSRG 58
+ QQ L QQ +Q Q+Q+ + Q+QQLL QQ+L ++ PQ + +SR
Sbjct: 741 YMNSQQSLLNQQLMGKKQTLQRQIME---QKQQLLLQQQMLADAEKIAPQDQINRHLSRP 797
Query: 59 LPPQQPQ-------QPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAG 111
P + Q QP G +S LN + + ++ ++ T
Sbjct: 798 PPDYKDQRRNVGNMQPTAQYSGGSSTISLNSNQALANPVSTHTILTPNSSLLSTSHGTRM 857
Query: 112 LTMPTATLGNLRGYG---MASPGLAAPSLTPPQLATP-NLQQFFPQATRQSLLGPPPVGV 167
++ TA + N+ YG P + + QL N +Q + PP +G
Sbjct: 858 PSLSTA-VQNMGMYGNLPCNQPNTYSVTSGMNQLTQQRNPKQLLANQNNPMMPRPPTLGP 916
Query: 168 PMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLP 227
N + + + + T + +MP + S+ S A P + E
Sbjct: 917 SNNNNVATFGAGSVGNSQQLRPNLTHSMASMPPQRTSNVMITSNTTA-PNWASQEGTSK- 974
Query: 228 PCPEDIAKEKRTPAPE--PEPCEASELPAKRLR---SSEEPTEK--EPPGQL----QVKA 276
+E T A P A+ P + L+ S++ +++ PP QL Q++
Sbjct: 975 ------QQEALTSAGVRFPTGTPAAYTPNQSLQQAVGSQQFSQRAVAPPNQLTPAVQMRP 1028
Query: 277 QPQARMTVPKQTQTP----DLLPEALEAQVLP 304
Q T+ QT P +L P L Q+LP
Sbjct: 1029 MNQMSQTLNGQTMGPLRGLNLRPNQLSTQILP 1060
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 61.6 bits (148), Expect = 3e-09
Identities = 113/462 (24%), Positives = 170/462 (36%), Gaps = 99/462 (21%)
Query: 5 QQQQQLQQQQQQLQQLQQQQL---QQQQLQQQQLLQLQQLL---QQSPPQAPLPMAVSRG 58
Q Q Q Q +QQ+QQ Q QQQQ QQ + +Q++ QQ P P P
Sbjct: 249 QPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQQRISMQEIQTQPQQIRPSQPQP------ 302
Query: 59 LPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAM---PPATY-------D 108
PPQQ Q L LQ S+ Q ++Q LQ Q M PP+ +
Sbjct: 303 -PPQQQQPQQLQLQ-QRQGSMQIPQYYQPQPMMQHLQEQQQQQMHLQPPSYHRDPHQYTP 360
Query: 109 TAGLTMPTATLGNLRGYGMASPGLAAPSLTP----------PQLATPNLQQFFPQATRQS 158
T+ LG++ Y P P P Q L+ + Q+
Sbjct: 361 EQAHTVQLIPLGSMSQYYYQEP--QQPYSHPLYQQSHLSQHQQREDSQLKTYSSDRQAQA 418
Query: 159 L------LGPPPVGVP-------------------MNPSQFNLSGRNPQKQARTSSSTTP 193
+ LGPP G+ ++PS +L+ PQ Q + S+ P
Sbjct: 419 MLSSHGDLGPPDTGMGDPASSDLTRVSSTLPHRPLLSPSGIHLNNMGPQHQQLSPSAMWP 478
Query: 194 NRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELP 253
M + D P E + +P+ E D AK K T + + E LP
Sbjct: 479 Q---MHLPDGRAQPGSPESSGQPKGAFGEQFD--------AKNKLTCSICLK--EFKNLP 525
Query: 254 A--KRLRS----SEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLP---EALEAQVLP 304
A +RS P K+ G+ + QPQ + P P LP E+L V+P
Sbjct: 526 ALNGHMRSHGGMRASPNLKQEEGEKVLPPQPQPPLPPPPPPPPPPQLPPEAESLTPMVMP 585
Query: 305 RFQP-RVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQ-QKQVQPQLQQ 362
P ++L + Q T + + + +P A + + E VL+ ++ QP + +
Sbjct: 586 VSVPVKLLPPKPSSQGFTNSTVAAPSARDKP-----ASSMSDDEMPVLEIPRKHQPSVPK 640
Query: 363 EAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQP 404
EP K VQ + + H P + + PP + P
Sbjct: 641 AEEPLKTVQEK---------KKFRHRPEPLFIPPPPSYNPNP 673
Score = 60.8 bits (146), Expect = 5e-09
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 194 NRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELP 253
N + +S +G+ ++A ++ + + + PP P ++ ++ P +P P L
Sbjct: 160 NNMAQVLHTQSAVMDGAPDSALRQLLSQKPME-PPAPAIPSRYQQVPQ-QPHPGFTGGLS 217
Query: 254 AKRLRSSEEPTEKEPPGQLQVKAQPQARMTVP--KQTQTPDLLPEALEAQVLPRFQPRVL 311
L+ + PT+ Q QP A++ V + Q P +L + ++ ++ P
Sbjct: 218 KPALQVGQHPTQGHLYYDYQ---QPLAQVPVQGGQPLQAPQMLSQHMQQMQQHQYYPPQQ 274
Query: 312 QVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQ 371
Q QA Q + I + Q++P + Q P+ L LQQ+Q Q+ Q +PQ +Q
Sbjct: 275 QQQAGQQRISMQEIQTQPQQIRPSQPQPPPQQQQPQQLQLQQRQGSMQIPQYYQPQPMMQ 334
Query: 372 PQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSL 412
H Q Q Q PP+ P + T EQ HT + L
Sbjct: 335 ---HLQEQQQQQMHLQPPS-YHRDPHQYTPEQAHTVQLIPL 371
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 60.5 bits (145), Expect = 6e-09
Identities = 34/62 (54%), Positives = 38/62 (61%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQ 63
QQQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ + + Q ++G Q
Sbjct: 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQA 118
Query: 64 PQ 65
PQ
Sbjct: 119 PQ 120
Score = 56.6 bits (135), Expect = 9e-08
Identities = 33/60 (55%), Positives = 36/60 (60%)
Query: 6 QQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQ 65
++QQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ QA AV + Q Q
Sbjct: 53 EEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQ 112
Score = 50.8 bits (120), Expect = 5e-06
Identities = 30/60 (50%), Positives = 35/60 (58%)
Query: 7 QQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQ 66
++Q +QQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ Q + A + QQ Q
Sbjct: 53 EEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQ 112
Score = 48.1 bits (113), Expect = 3e-05
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 10 LQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLL 69
L++QQ+Q QQ QQQQ QQQQ QQQQ Q QQ QQ Q AV+ Q Q
Sbjct: 52 LEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQA- 110
Query: 70 NLQGTN 75
QGT+
Sbjct: 111 -TQGTS 115
Score = 45.1 bits (105), Expect = 3e-04
Identities = 27/63 (42%), Positives = 31/63 (49%)
Query: 11 QQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLN 70
+QQ+QQ QQ QQQQ QQQQ QQQQ Q QQ QQ Q + + QQ
Sbjct: 54 EQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQG 113
Query: 71 LQG 73
G
Sbjct: 114 TSG 116
Score = 38.9 bits (89), Expect = 0.020
Identities = 27/66 (40%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLL-QQSPPQAPLPMAVSRGLPPQ 62
QQQQQQ QQQQQ + QQ QQ Q Q QL Q+ APLP P
Sbjct: 84 QQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQLFHSQTLTTAPLPGTTPLYPSPM 143
Query: 63 QPQQPL 68
P P+
Sbjct: 144 TPMTPI 149
Score = 38.5 bits (88), Expect = 0.026
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 5 QQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQ 48
Q L ++Q +Q QQQQ QQQQ QQQQ Q QQ QQ Q
Sbjct: 44 QNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 87
Score = 37.4 bits (85), Expect = 0.058
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 337 QKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQP 396
Q++ Q Q + QQ+Q Q Q QQ+ + Q+Q Q Q QA + Q+ Q +
Sbjct: 55 QQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGT 114
Query: 397 PEQTHEQPHTQPQVSLLAPEQTPV 420
Q + H+Q + P TP+
Sbjct: 115 SGQAPQLFHSQTLTTAPLPGTTPL 138
Score = 37.0 bits (84), Expect = 0.076
Identities = 28/112 (25%), Positives = 42/112 (37%)
Query: 295 PEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQK 354
P+ +P F P + Q + + Q + Q+Q Q Q + QQ+
Sbjct: 17 PQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQ 76
Query: 355 QVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHT 406
Q Q Q QQ+ + Q+Q Q Q A + S Q P+ H Q T
Sbjct: 77 QQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQLFHSQTLT 128
Score = 34.3 bits (77), Expect = 0.49
Identities = 31/124 (25%), Positives = 43/124 (34%)
Query: 308 PRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQ 367
P Q A Q P IP + Q + L + ++Q + Q QQ+ + Q
Sbjct: 8 PPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQ 67
Query: 368 KQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGL 427
+Q Q Q Q Q Q Q+ Q Q Q T Q + Q P + H L
Sbjct: 68 QQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQLFHSQTL 127
Query: 428 EMPP 431
P
Sbjct: 128 TTAP 131
Score = 31.2 bits (69), Expect = 4.2
Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 269 PGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPST 328
P Q A PQ MT +P ++P P L + + Q Q Q +
Sbjct: 8 PPYAQGLASPQGAMTPGIPIFSP-MMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQ--QQ 64
Query: 329 DTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQ 385
Q Q + Q+Q Q Q + QQ+Q Q Q QQ+A VQ QA Q
Sbjct: 65 QQQQQQQQQQQQQQQQQQQ----QQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQ 117
Score = 30.0 bits (66), Expect = 9.3
Identities = 42/171 (24%), Positives = 60/171 (35%), Gaps = 20/171 (11%)
Query: 12 QQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLNL 71
Q Q L + QQ+Q QQQQ Q QQ QQ Q QQ QQ
Sbjct: 41 QPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQ------------QQQQQQQQQQQ 88
Query: 72 QGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTAGLTMPTATLGNLRGYGMASPG 131
Q + + +Q++ Q QG P + + T T L G P
Sbjct: 89 QQQQQQQAVAAAAVQQSTSQQATQGTS--GQAPQLFHS-----QTLTTAPLPGTTPLYPS 141
Query: 132 LAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQ 182
P +TP ATP + Q+++ +G ++ L RN +
Sbjct: 142 PMTP-MTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAE 191
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 60.5 bits (145), Expect = 6e-09
Identities = 103/401 (25%), Positives = 131/401 (32%), Gaps = 94/401 (23%)
Query: 45 SPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPP 104
+PP +P P+ LP P LQ + S ++ S L L + LQ L A
Sbjct: 450 TPPDSP-PLQAPLSLPASPP------LQTSLSPAV---SPLSSPLTIHPLQALSSLASHS 499
Query: 105 ATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPP 164
+ L MP P SL PP L TP P L PPP
Sbjct: 500 PQAPLSSLIMP--------------PLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPP 545
Query: 165 VGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQ 224
+ Q ++ TTP+ +T P P +A + TP
Sbjct: 546 L------------------QTASAPLTTPHLETPPC-----PAPCPLQAPPSPLTTPP-- 580
Query: 225 DLPPCPEDIAKEKRTPAPEPEPCEASE----LPAKRLRSSEEPTEKEPPG----QLQVKA 276
P P IA TP P+ P AS LP+ L P + PP LQ
Sbjct: 581 --PETPSSIA----TPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPP 634
Query: 277 QPQARMTV-PKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPK 335
P A + P T +P P AL +L P P VQ
Sbjct: 635 SPPASPPLSPLATPSPQA-PNALAVHLLQA-----------------PFSPPPSPPVQAP 676
Query: 336 LQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVS-- 393
A SP Q P L A P QV P A P + P PP Q
Sbjct: 677 FSPPASPPVSPS--ATPPSQAPPSL---AAPPLQVPPS--PPASPPMSPSATPPPQAPPP 729
Query: 394 -VQPPEQTHEQPHTQPQVSLLA--PEQTPVVVHVCGLEMPP 431
PP Q P P +S A P + P ++ L++PP
Sbjct: 730 LAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP 770
Score = 60.1 bits (144), Expect = 8e-09
Identities = 103/412 (25%), Positives = 133/412 (32%), Gaps = 56/412 (13%)
Query: 45 SPPQAPLPMAV-SRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRA---LLLQQLQGLDQF 100
SPP P A S PP Q L + L LQ L L LQ
Sbjct: 359 SPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL 418
Query: 101 AMPPATYDTAGLTM-PTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSL 159
P + LTM P T +L SP + P+ TPP +P LQ SL
Sbjct: 419 GSPTLQATHSFLTMSPRQTQASL-----TSP--SRPASTPPD--SPPLQ------APLSL 463
Query: 160 LGPPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPP-EGSEEAAEPRM 218
PP+ ++P+ LS + SS + P+ PP E A P +
Sbjct: 464 PASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSL 523
Query: 219 DTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQP 278
TP P E++ P+ P P + + P P P ++A P
Sbjct: 524 QTPPASLTTPPLENL------PSLAPPPLQTASAPLTTPHLETPPC----PAPCPLQAPP 573
Query: 279 QARMTVPKQTQT-----PDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQ 333
T P +T + P P AL + L L A Q P +
Sbjct: 574 SPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL------AL 627
Query: 334 PKLQKQAQTQTSPEHLVLQQKQVQP---------QLQQEAEPQKQVQPQVHTQAQPSVQP 384
P LQ SP L Q Q P VQ A P V P
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Query: 385 QEHPPAQVS---VQPPEQTHEQPHTQPQVSLLA--PEQTPVVVHVCGLEMPP 431
PP+Q PP Q P P +S A P Q P + L++PP
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Score = 53.5 bits (127), Expect = 8e-07
Identities = 88/368 (23%), Positives = 111/368 (30%), Gaps = 79/368 (21%)
Query: 127 MASPGLAAPSLTPPQLAT------PNLQQFFPQATRQSLLGP----PPVGVPMNPSQFNL 176
+ SP PS PP + T P+LQ P SL P PP + ++ Q
Sbjct: 357 LPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATT 416
Query: 177 SGRNPQKQARTSSSTTPNRKTM-----PVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPE 231
S +P QA S T R+T P S PP+ P + P LP P
Sbjct: 417 SLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPD------SPPLQAP--LSLPASPP 468
Query: 232 DIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEK-----EPPGQLQVK------AQPQA 280
+P P L A +S P PP + Q P A
Sbjct: 469 LQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPA 528
Query: 281 RMTVPKQTQTPDLLPEALEAQVLPRFQPRV----------LQVQAQVQSQTQPRIPST-- 328
+T P P L P L+ P P + LQ + P PS+
Sbjct: 529 SLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIA 588
Query: 329 -------DTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQL---QQEAEPQKQVQPQVHTQA 378
P LQ SP L Q P L +A P P + A
Sbjct: 589 TPPPQAPPALASPPLQGLPSPPLSP--LATPPPQAPPXLALPPLQAPPSPPASPPLSPLA 646
Query: 379 QPSVQ---------------PQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVH 423
PS Q P PP Q PP P P P Q P +
Sbjct: 647 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP------PSQAPPSLA 700
Query: 424 VCGLEMPP 431
L++PP
Sbjct: 701 APPLQVPP 708
Score = 43.1 bits (100), Expect = 0.001
Identities = 74/302 (24%), Positives = 102/302 (33%), Gaps = 40/302 (13%)
Query: 162 PPPVGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTP 221
P PV P S G QK R S+ T R ++ P+ S +A R DT
Sbjct: 111 PGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKA-----TEAPKRSALSAGARRDTS 165
Query: 222 EDQDLPPCPEDIAKEKRT---------PAPEPEPCEASELPAKRLRSSEE--PTEKEPPG 270
P P +A+ R PAP P +E P K + S+ E TE P
Sbjct: 166 GPTPGTPSPA-MARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA 224
Query: 271 QLQVKA-----QPQARMTVPKQTQTPDLLPEALEAQVLPR-----FQPRVLQVQAQVQSQ 320
+ + A +P +R T A+ PR QP+ +QA Q
Sbjct: 225 RRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ 284
Query: 321 -TQPR---------IPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQV 370
T PR + S+ +A+ P++ P A P
Sbjct: 285 VTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLA 344
Query: 371 QPQVHTQAQPSVQPQEHPPAQVSVQ-PPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEM 429
P A PS+Q PPA Q PP T P + + P Q P + L+
Sbjct: 345 PPS--PSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQA 402
Query: 430 PP 431
PP
Sbjct: 403 PP 404
Score = 37.4 bits (85), Expect = 0.058
Identities = 55/227 (24%), Positives = 74/227 (32%), Gaps = 64/227 (28%)
Query: 46 PPQAPLPMAVSR-GLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPP 104
PPQAP P+A +PP P P ++ T + L +PP
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV------------PPLLAAPPLQVPP 770
Query: 105 ATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPP 164
+ P A+L SP P PP LATP LQ L PP
Sbjct: 771 S---------PPASLP-------MSPLAKPPPQAPPALATPPLQ----------ALPSPP 804
Query: 165 VGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKTMPVEDKSDPPEGSEEAAEPRMDTPEDQ 224
P + F+ S P S TP PP+ A P + P
Sbjct: 805 ASFP-GQAPFSPSASLPM-----SPLATP------------PPQAPPVLAAPLLQVPPS- 845
Query: 225 DLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQ 271
PP + +R P P P+ + + RL + P PP +
Sbjct: 846 --PPASPTLQAPRRPPTPGPD----TSVSGPRLTLALAPGPPPPPSR 886
Score = 33.9 bits (76), Expect = 0.64
Identities = 87/322 (27%), Positives = 107/322 (33%), Gaps = 88/322 (27%)
Query: 42 LQQSP-PQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQF 100
LQ P P A LPM+ PPQ P AL LQ L
Sbjct: 766 LQVPPSPPASLPMSPLAKPPPQAPP----------------------ALATPPLQALPS- 802
Query: 101 AMPPATYDTAGLTMPTATLGN---LRGYGMASPGLAAPSL----TPPQLAT--------- 144
PPA++ P+A+L A P LAAP L +PP T
Sbjct: 803 --PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 860
Query: 145 --PNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRNPQKQARTSSST-TPNRKTMPVE 201
P+ P+ T GPPP P LSG P +SS+T TP +
Sbjct: 861 PGPDTSVSGPRLTLALAPGPPP--PPSRSPSSTLSG--PDLAGHSSSATSTPEE----LR 912
Query: 202 DKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAP---------EPEPCEASEL 252
PEG AA P P D +L C A R PAP P P +
Sbjct: 913 GYDSGPEGG-AAASP----PPDAELAACHP--AAWSRGPAPPLAFRGAPGAPLPWPPATG 965
Query: 253 PAK-----RLRSSEEPTEKEP-PGQLQVKAQP-------------QARMTVPKQTQTPDL 293
P + +E P P PG L P A PKQ + +L
Sbjct: 966 PGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGEL 1025
Query: 294 LPEALEAQVLPRFQPRVLQVQA 315
AL+A V+ R L + A
Sbjct: 1026 PLGALQASVVQHLLSRTLLLAA 1047
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 60.5 bits (145), Expect = 6e-09
Identities = 48/108 (44%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQL--------------QQQQLQQQQLLQLQQLLQQSPPQA 49
QQQQQQ QQQQQQ QQ QQQQ QQQQ QQQQ Q QQ QQ Q
Sbjct: 2056 QQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQ 2115
Query: 50 PLPMAVSRGLPPQ-QPQ-QPLLNLQGTNSASLLNGSMLQRALLLQQLQ 95
+ PPQ QPQ QP QG Q A L++QLQ
Sbjct: 2116 HQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQ----QQQQTAALVRQLQ 2159
Score = 56.6 bits (135), Expect = 9e-08
Identities = 57/206 (27%), Positives = 81/206 (39%), Gaps = 13/206 (6%)
Query: 224 QDLPPCPEDIAKEKRT-PAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARM 282
Q P + ++ T PA P S P + S PT +P LQ +
Sbjct: 1942 QGYTPYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQ 2001
Query: 283 TVPKQ----TQTPDLLPEALE-AQVLPRFQPRVLQ-VQAQVQSQT----QPRIPSTDTQV 332
P T T + L+ ++ P Q VQA V+S Q + Q
Sbjct: 2002 QAPTYGHGLTSTQRFSHQTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQ 2061
Query: 333 QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQV 392
Q + Q+Q Q Q ++ + QQ+Q Q QQ+ + Q+Q Q Q Q Q Q Q+H Q
Sbjct: 2062 QQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQ 2121
Query: 393 SVQPPEQTHEQPHTQPQVSLLAPEQT 418
P Q QP +QPQ +QT
Sbjct: 2122 QQAAPPQP--QPQSQPQFQRQGLQQT 2145
Score = 50.8 bits (120), Expect = 5e-06
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 278 PQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQV----- 332
P + V ++ +LPE + Q + Q + Q Q Q Q Q Q I Q
Sbjct: 2032 PMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQ 2091
Query: 333 -QPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEA---EPQKQVQPQVHTQAQPSVQPQEHP 388
Q + Q+Q Q Q + QQ+Q Q Q QQ+A +PQ Q QPQ Q Q Q+
Sbjct: 2092 QQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQT 2151
Query: 389 PAQVSVQPPEQTHEQPHTQPQVSL 412
A V + ++ QP QP ++
Sbjct: 2152 AALVRQLQQQLSNTQP--QPSTNI 2173
Score = 47.8 bits (112), Expect = 4e-05
Identities = 35/74 (47%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 4 QQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQ----QLLQQSPPQAPLPMAVSRGL 59
QQQQQQ QQQQQQ QQ QQQQ Q Q Q Q Q Q QQ A L + + L
Sbjct: 2103 QQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQL 2162
Query: 60 PPQQPQQPLLNLQG 73
QP QP N+ G
Sbjct: 2163 SNTQP-QPSTNIFG 2175
Score = 43.9 bits (102), Expect = 6e-04
Identities = 27/57 (47%), Positives = 30/57 (52%)
Query: 10 LQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQ 66
L +QQQQ QQ QQQQ QQQQ QQQQ Q + QQ Q + QQ QQ
Sbjct: 2048 LPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQ 2104
Score = 42.7 bits (99), Expect = 0.001
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 257 LRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQAQ 316
+RS+ E++ Q Q + Q Q + +Q Q + + + Q+L + Q + Q Q Q
Sbjct: 2042 VRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQ 2101
Query: 317 VQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQV-- 374
Q Q Q + Q Q + Q+Q Q Q +P Q Q QPQ Q++ Q Q Q Q
Sbjct: 2102 QQQQQQQQ-----QQQQQQHQQQQQQQAAPPQ---PQPQSQPQFQRQGLQQTQQQQQTAA 2153
Query: 375 ----------HTQAQPS 381
+TQ QPS
Sbjct: 2154 LVRQLQQQLSNTQPQPS 2170
Score = 32.7 bits (73), Expect = 1.4
Identities = 62/243 (25%), Positives = 91/243 (37%), Gaps = 58/243 (23%)
Query: 215 EPRMDTPEDQDLPPCPEDIAKEKRTPAP---------EPEPCEASELPAKRLRSSEEPTE 265
EP PED++ PP P + EK+ P P P E + K + S+ T+
Sbjct: 1740 EPLPLPPEDEE-PPAPTLLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKRSQPATK 1798
Query: 266 KEPPGQLQVKAQPQARMTVPKQTQTPDLL----PEAL--------------EAQVLPRFQ 307
E G ++ P +TVP PDLL P ++ + Q LP
Sbjct: 1799 TEDYGMGPGRSGPYG-VTVP-----PDLLHHPNPGSITHLNYRQGSIGLYTQNQPLPAGG 1852
Query: 308 PRV-------LQVQAQVQSQTQPRI-PSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQ 359
PRV L +Q T P + P+T T V +T +Q QP
Sbjct: 1853 PRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTGVMGLEPSSYKTSV--------YRQQQPA 1904
Query: 360 LQQEAEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQ-----PPEQTHE--QPHTQPQVSL 412
+ Q ++Q+Q Q SV Q P + +Q P +H Q HT P ++
Sbjct: 1905 VPQGQRLRQQLQQSQGMLGQSSVH-QMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGTM 1963
Query: 413 LAP 415
+ P
Sbjct: 1964 VPP 1966
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,310,703
Number of Sequences: 37866
Number of extensions: 2417780
Number of successful extensions: 45286
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 1031
Number of HSP's that attempted gapping in prelim test: 19704
Number of HSP's gapped (non-prelim): 13079
length of query: 837
length of database: 18,247,518
effective HSP length: 111
effective length of query: 726
effective length of database: 14,044,392
effective search space: 10196228592
effective search space used: 10196228592
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.